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Achievement: Pull SharkAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull SharkAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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@WeitzGroup @B2-Bayesian-for-Biology

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RaunakDey/README.md

Hi there 👋

I am Raunak, a PhD student at the University of Maryland, College Park 🇺🇸 in the Weitz group. My research is highly interdisciplinary, covering the broad areas of Physics and Deep Learning based-inverse modeling for dynamical systems. Broadly, I have worked on problems in virus-microbe networks, stochastic trajectories of Brownian particles, SNR optimization for feedback-control measurements using the tools of dynamical systems and deep learning.

  • 📫 Please feel free to reach me out at rdey-at-umd-dot-edu with questions and comments.
  • 🔭 I’m currently working on Latent space modeling for dynamical systems.
  • 👯 I’m looking to collaborate on Bayesian inference for dynamical systems.
  • ⚡ Fun fact: I once starred in a commercial for a start-up! 😇
  • 🇮🇳 Now I live in the US, but I come from the beautiful city of Kolkata in India.

GitHub Stats

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  1. InvODE InvODE Public

    A lightweight, powerful and intuitive Python library for parameter optimization in ordinary differential equation (ODE) systems. InvODE combines global optimization with local refinement techniques…

    Python 4

  2. tattoo-llm/llmtime-dynamics tattoo-llm/llmtime-dynamics Public

    We use underlying LLM based models to perform probabilistic timeseries analysis and forecasting of Physics based dynamical systems

    Jupyter Notebook 3 1

  3. tattoo-llm/dynamo tattoo-llm/dynamo Public

    Dyna-Mo is a "dynamical model" simulation framework to simualate Physics based time-series on Networks.

    Python 1

  4. phamily phamily Public

    A large scale latent variable compartmental model for simulating abundance/population time series of interacting phages and microbes that undergoes lysis in presence of the phages.

    Python 2

  5. VIMIMO-Virus-Microbe-modeller VIMIMO-Virus-Microbe-modeller Public

    Create, test and deploy virus-microbe interaction models for community experiments and population time series

    Jupyter Notebook 1

  6. RogerRln/metapop_lung RogerRln/metapop_lung Public

    Repository for the metapopulation model of a P.a. lung infection

    MATLAB 1 1