System Setup

In this section we detail the setup required to run the code used in the thesis.

Folder Structure

• Main

• Main/ArraySubmission

• Main/ArraySubmission/Logs

• Main/ArraySubmission/Models

• Main/ArraySubmission/Models/TrainingHistory

• Main/ArraySubmission/Results

• Main/Images

Required Libraries

• numpy
• pandas
• os
• tqdm
• pickle
• sklearn
• scipy
• xgboost
• matplotlib
• seaborn
• mpl_interactions
• tensorflow
• shap
• lime
• matplotlib
• sys

List of all Installed Libraries

IPython	chunk	multiprocessing	sympyprinting
PIL	clang	nbclient	symtable
PyQt5	cloudpickle	nbconvert	sys
future	cmath	nbformat	sysconfig
_abc	cmd	nest_asyncio	tabnanny
_ast	code	netbios	tarfile
_asyncio	codecs	netrc	telnetlib
_bisect	codeop	networkx	tempfile
_blake2	collections	nntplib	tensorboard
_bootlocale	colorama	notebook	tensorboard_data_server
_bz2	colorcet	nt	tensorboard_plugin_wit
_cffi_backend	colorsys	ntpath	tensorflow
_codecs	commctrl	ntsecuritycon	tensorflow_estimator
_codecs_cn	compileall	nturl2path	termcolor
_codecs_hk	concurrent	numba	terminado
_codecs_iso2022	configparser	numbergen	test
_codecs_jp	contextlib	numbers	testpath
_codecs_kr	contextvars	numpy	tests
_codecs_tw	copy	oauthlib	textwrap
_collections	copyreg	odbc	this
_collections_abc	crypt	opcode	threading
_compat_pickle	csv	operator	threadpoolctl
_compression	ctypes	opt_einsum	tifffile
_contextvars	curses	optparse	time
_csv	cycler	os	timeit
_ctypes	cythonmagic	packaging	timer
_ctypes_test	dataclasses	pandas	tkinter
_datetime	datetime	pandocfilters	token
_decimal	dateutil	panel	tokenize
_distutils_hack	dbi	param	tornado
_dummy_thread	dbm	parser	tqdm
_elementtree	dde	parso	trace
_functools	decimal	pasta	traceback
_hashlib	decorator	pathlib	tracemalloc
_heapq	defusedxml	pdb	traitlets
_imp	difflib	perfmon	tty
_io	dis	pickle	turtle
_json	distutils	pickleshare	turtledemo
_locale	doctest	pickletools	types
_lsprof	dummy_threading	pip	typing
_lzma	email	pipes	typing_extensions
_markupbase	encodings	pkg_resources	unicodedata
_md5	ensurepip	pkgutil	unittest
_msi	entrypoints	platform	urllib
_multibytecodec	enum	plistlib	urllib3
_multiprocessing	errno	poplib	uu
_opcode	faulthandler	posixpath	uuid
_operator	ffmpeg	pprint	venv
_osx_support	ffmpy	profile	warnings
_overlapped	filecmp	prometheus_client	wave
_pickle	fileinput	prompt_toolkit	wcwidth
_py_abc	flatbuffers	pstats	weakref
_pydecimal	fnmatch	pty	webbrowser
_pyio	formatter	pvectorc	webencodings
_pyrsistent_version fractions	py_compile	werkzeug
_queue	ftplib	pyasn1	wheel
_random	functools	pyasn1_modules	widgetsnbextension
_sha1	gast	pyclbr	win2kras
_sha256	gc	pycparser	win32api
_sha3	genericpath	pyct	win32clipboard
_sha512	getopt	pydoc	win32com
_signal	getpass	pydoc_data	win32con
_sitebuiltins	gettext	pyexpat	win32console
_socket	glob	pygments	win32cred
_sqlite3	google_auth_oauthlib pylab	win32crypt
_sre	grpc	pyparsing	win32cryptcon
_ssl	gzip	pyrsistent	win32event
_stat	h5py	pythoncom	win32evtlog
_statistics	hashlib	pytz	win32evtlogutil
_string	heapq	pyviz_comms	win32file
_strptime	hmac	pywin	win32gui
_struct	holoviews	pywin32_bootstrap	win32gui_struct
_symtable	html	pywin32_testutil	win32help
_testbuffer	http	pywintypes	win32inet
_testcapi	idlelib	pywt	win32inetcon
_testconsole	idna	queue	win32job
_testimportmultiple imageio	quopri	win32lz
_testinternalcapi	imaplib	random	win32net
_testmultiphase	imghdr	rasutil	win32netcon
_thread	imp	re	win32pdh
_threading_local	importlib	regcheck	win32pdhquery
_tkinter	importlib_metadata	regutil	win32pdhutil
_tracemalloc	inspect	reprlib	win32pipe
_warnings	io	requests	win32print
_weakref	ipaddress	requests_oauthlib	win32process
_weakrefset	ipykernel	rlcompleter	win32profile
_win32sysloader	ipykernel_launcher	rmagic	win32ras
_winapi	ipython_genutils	rsa	win32rcparser
_winxptheme	ipywidgets	runpy	win32security
_xxsubinterpreters	isapi	sched	win32service
_yaml	itertools	scipy	win32serviceutil
abc	jedi	seaborn	win32timezone
absl	jinja2	secrets	win32trace
adodbapi	joblib	select	win32traceutil
afxres	json	selectors	win32transaction
aifc	jsonschema	send2trash	win32ts
antigravity	jupyter	servicemanager	win32ui
argon2	jupyter_client	setuptools	win32uiole
argparse	jupyter_core	shap	win32verstamp
array	jupyterlab_pygments shelve	win32wnet
ast	jupyterlab_widgets	shlex	wincertstore
astunparse	keras	shutil	winerror
async_generator	keras_preprocessing signal	winioctlcon
asynchat	keyword	site	winnt
asyncio	kiwisolver	six	winperf
asyncore	lib2to3	skimage	winpty
atexit	lime	sklearn	winreg
attr	linecache	slicer	winsound
audioop	llvmlite	smtpd	winxpgui
autoreload	locale	smtplib	winxptheme
backcall	logging	sndhdr	wrapt
base64	lzma	socket	wsgiref
bdb	mailbox	socketserver	xdrlib
benchmark	mailcap	sqlite3	xgboost
binascii	markdown	sre_compile	xml
binhex	markupsafe	sre_constants	xmlrpc
bisect	marshal	sre_parse	xxlimited
bleach	math	ssl	xxsubtype
bokeh	matplotlib	sspi	yaml
builtins	matplotlib_inline	sspicon	zipapp
bz2	mimetypes	stat	zipfile
cProfile	mistune	statistics	zipimport
cachetools	mmap	storemagic	zipp
calendar	mmapfile	string	zlib
certifi	mmsystem	stringprep	zmq
cffi	modulefinder	struct	~umpy
cgi	mpl_interactions	subprocess
cgitb	msilib	sunau
charset_normalizer	msvcrt	symbol