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Output cases per day, deme, and variant

Status: Open.

#23 In trvrb/antigen;

· huddlej opened on Jan 19, 2022

Output case counts per day and deme

Status: Open.

#22 In trvrb/antigen;

· huddlej opened on Jan 19, 2022

Output tree imbalance

Necessary

Status: Open.

#13 In trvrb/antigen;

· trvrb opened on May 7, 2014

Output Tajima's D

Necessary

Status: Open.

#12 In trvrb/antigen;

· trvrb opened on May 6, 2014

Output random number seed to out.summary

Status: Open.

#11 In trvrb/antigen;

· trvrb opened on Feb 24, 2014

Include reseeding

Status: Open.

#9 In trvrb/antigen;

· trvrb opened on Feb 24, 2014

Allow halting conditions

Necessary

Status: Open.

#6 In trvrb/antigen;

· trvrb opened on Jan 29, 2014

Allow recombination

Status: Open.

#5 In trvrb/antigen;

· trvrb opened on Jan 29, 2014

Allow coinfection

Status: Open.

#2 In trvrb/antigen;

· trvrb opened on Jan 29, 2014