A collection of awesome things regarding all omics.
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May 6, 2025
#
wgs-analysis
Here are 8 public repositories matching this topic...
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
workflow metagenomics common-workflow-language cwl metagenomic-analysis metagenomic-classification metagenomic-data amplicon-pipeline cwl-workflow cwl-descriptions metagenomic-pipeline wgs-analysis mgnify
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Oct 3, 2025 - HTML
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
genome nextflow sequencing wgs ngs-analysis outbreak-detection bacterial-genomes outbreaks bacterial-wgs-training wgs-analysis
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Oct 31, 2024 - HTML
Bacterial Surveillance platform, focused on QC in Denmark
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Apr 9, 2019 - Python
Genome Copilot: AI-Interactive Genomic Visualization + Variant Risk Screening
bioinformatics genetics gene-expression vcf gene-annotation gene-ontology phenotype variant-calling variant-filtration variant-analysis wgs-analysis
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Jan 18, 2026 - TypeScript
This repository contains scripts to assist the Cameroon NPHL Bioinformatic Team in analyzing Mpox WGS data for outbreak tracking and characterization.
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Feb 10, 2026 - Python
This script takes advantage of read pairing in bam/cram files to identify the presence of STR extensions.
str paired-end ngs-analysis paired-end-sequencing wgs-analysis simple-tandem-repeats fxn frataxin str-extension paired-end-reads
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Dec 8, 2021 - Shell
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