Demonstration of the UPGMA hierarchal clustering algorithm in Pandas, Seaborn, and Scipy
Phylogenetic tree manipulating with Python
Phylogenetic Insights from Turtles, Lizards, Crocodiles and Birds Sequences. Jupyter Notebook with tree construction
🍀 bioseq - a Python package to handle biological sequences and perform common Bioinformatics operations.
UPGMA Algorithm in C++
Project for the master course: Introduction to bioinformatics
UPGMA clustering of constructing phylogenetic relationships implemented from scratch
[Python] Construction of SARS-CoV-2 Phylogenetic Tree.
A simple PHP library to build phylogenic trees from distance matrix
This is an App that allows You to perform some task on the Bioinformatics field.
A complete SSR population genetics toolkit for any species. Includes data cleaning, UPGMA clustering, PCoA, STRUCTURE formatting, STRUCTURE barplot visualization, and supporting scripts for reproducible microsatellite population analyses.
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