Mechanistic Pan-Cancer Signaling Model

CellDeathSpreading provides spatiotemporal metrics to detect locally propagative ferroptosis and relate collective death dynamics to mechanisms such as lysosome rupture.

Biochemical Systems Theory Model of TNFα related pathways (Sasidharakurup and Diwakar 2020)

2D epithelial vertex model with energy minimization, cell growth simulation, ACAM import, and comprehensive validation tools