Draft
Conversation
…error messages * improved query of meta data in create-dataloader * fixed bugs in yaml templates
…the same name as CLI command
…ot have the same name as CLI command" This reverts commit 1009273.
… into feature/cli_improvements
#528) * switched data library, CLI and curation annotation to yaml version 1.2 * improved curation docs * improved guidance in sfaira create-dataloader * improved reaction to existing loaders * improved data loader linting in CLI * support for count and processed data matrices in same loader, deprecates "normalization" * support for feature type annotation, allows for ATAC and CITE data (feature_type) * support for based genetic modification meta data (gm) * support for basic treatment meda data (treatment) * support for cell tracking in meta studies (source_doi) * support for spatial data * support for VDJ data * support for velocity data * support for reference genome annotation * support for arbirtrary organisms in genome container
… into feature/cli_improvements
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.