Ancestor Frequency Difference (AFD): distance for tumor trees

AFD is a new method for measuring dissimilarity between mutation or clonal trees. This repo contain the source code to compute AFD in 'src/' and the data and scripts to run the evaluations of AFD in scripts/.

Set up

The implementation of AFD was built and tested with Python 3.13. To install AFD in your environnement run the following command:

pip install -e src/

Usage

TODO