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Where can i download test samples. download Link is not active

Status: Open.

#17 In slzhao/QC3;

· Kiran936 opened on Mar 11, 2022

Error: Can't find GT or AD in vcf file!

Status: Open.

#16 In slzhao/QC3;

· michal-zawada opened on Oct 20, 2021

Running QC3 on VCF without "Allelic Depth" (AD) field

Status: Open.

#15 In slzhao/QC3;

· ghost opened on Jun 28, 2017

Not clear from the readme, that samplenames MUST be different!

Status: Open.

#14 In slzhao/QC3;

· serge2016 opened on Mar 10, 2017

Resume from last success step

Status: Open.

#13 In slzhao/QC3;

· serge2016 opened on Mar 10, 2017

can't write Permission denied at /home/bg/soft/QC3/source/makeReport.pm line 55, <TEMP> line 91.

Status: Open.

#12 In slzhao/QC3;

· serge2016 opened on Mar 10, 2017

QC3 VCF Error

Status: Open.

#11 In slzhao/QC3;

· boxiangliu opened on Nov 21, 2016

samtools depth does not output positions with zero coverage

Status: Open.

#5 In slzhao/QC3;

· mfoll opened on May 4, 2016

Does QC3 work on mpileup/VarScan vcf files?

Status: Open.

#4 In slzhao/QC3;

· rrt8 opened on Mar 7, 2016

tags for different releases ?

Status: Open.

#3 In slzhao/QC3;

· pescobar opened on Nov 3, 2015

Bug report

Status: Open.

#2 In slzhao/QC3;

· shanj-github opened on Sep 14, 2015

Error while running QC3: vcf QC

Status: Open.

#1 In slzhao/QC3;

· shalabhsuman opened on Apr 14, 2015