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36 changes: 36 additions & 0 deletions README.md
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# Dev Notes

## My Model vs Main Branch Model

I tweaked the model at [this link](https://github.com/s-Sayan/ShearNet/blob/main/shearnet/core/models.py#L43) based of numerous research papers. The model I refer to is [here](./shearnet/core/models.py#L323). Plotted here is the comparison of the original model vs my new model.

### Low Noise (nse_sd = 1e-5)

The comparison is also housed at [this directory](./notebooks/research_vs_control_low_noise/).

Here is the comparions plots:

![learning curve](./notebooks/research_vs_control_low_noise/learning_curves_comparison_20250702_172032.png)

![residuals comparison](./notebooks/research_vs_control_low_noise/residuals_comparison_20250702_172126.png)

![scatter comparison](./notebooks/research_vs_control_low_noise/prediction_comparison_20250702_172119.png)

### High Noise (nse_sd = 1e-3)

The comparison is also housed at [this directory](./notebooks/research_vs_control_high_noise/).

Here is the comparions plots:

![learning curve](./notebooks/research_vs_control_high_noise/learning_curves_comparison_20250702_191955.png)

![residuals comparison](./notebooks/research_vs_control_high_noise/prediction_comparison_20250702_192242.png)

![scatter comparison](./notebooks/research_vs_control_high_noise/residuals_comparison_20250702_192253.png)

## Next Steps

My next steps are to impliment psf images into the training data. This will chage the initial shape from (batch_size, 53, 53) to (batch_size, 53, 53, 2). I hope to also get noise images eventually as well.

Training on this should only increase the accuracy of ShearNet, and adding both psf and noise images will put it on even ground with NGMix.

# ShearNet

A JAX-based neural network implementation for galaxy shear estimation.
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8 changes: 4 additions & 4 deletions configs/example.yaml
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Expand Up @@ -3,12 +3,12 @@ dataset:
samples: 100000
psf_sigma: 0.25
exp: "ideal"
nse_sd: 1.0e-5
nse_sd: 1.0e-3
seed: 42

# Model configuration
model:
type: "cnn" # Options: mlp, cnn, resnet
type: "cnn" # Options: cnn, dev_cnn, resnet, dev_resnet

# Training configuration
training:
Expand All @@ -29,7 +29,7 @@ evaluation:
output:
save_path: null # Will use SHEARNET_DATA_PATH/model_checkpoint if null
plot_path: null # Will use SHEARNET_DATA_PATH/plots if null
model_name: "cnn1"
model_name: "control_cnn_high_noise"

# Plotting configuration
plotting:
Expand All @@ -40,4 +40,4 @@ comparison:
mcal: true
ngmix: true
psf_model: "gauss"
gal_model: "gauss"
gal_model: "gauss"
102 changes: 102 additions & 0 deletions configs/research_resnet.yaml
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# Research-Backed Training Configuration
# Every parameter choice justified by literature or empirical evidence

dataset:
# Citation: "Statistical Learning Theory" (Vapnik, 1998) - larger datasets improve generalization
# Practical: 100k samples provides sufficient statistical power for 4-parameter estimation
# Your Evidence: First successful model used similar scale effectively
samples: 100000

# Citation: "Euclid Survey" typical ground-based seeing conditions
# Astronomical Context: 0.25 arcsec ≈ 1.8 pixels at 0.141"/pixel scale
# Conservative Choice: Moderate PSF for stable performance baseline
psf_sigma: 0.25

# Experimental Control: Ideal conditions for baseline model development
# Future Work: Can extend to "superbit" for realistic conditions after validation
exp: "ideal"

# Citation: Signal-to-noise considerations for precision shape measurement
# Rationale: Low noise (1e-5) ensures algorithm performance dominates over measurement noise
# Comparable to space-based surveys like HST/JWST noise levels
nse_sd: 1.0e-3

# Reproducibility: Fixed seed for consistent train/val splits and initialization
seed: 42

model:
# Custom model with research-backed enhancements
type: "research_backed"

training:
# Citation: "Empirical Evaluation of Generic Convolutional and Recurrent Networks" (Brock et al., 2017)
# Recommendation: ~300 epochs sufficient for CNN convergence on structured tasks
# Your Context: Galaxy shape measurement benefits from extended training for precision
epochs: 300

# Citation: "Accurate, Large Minibatch SGD" (Goyal et al., 2017)
# Optimal Range: 64-256 for image tasks, 128 balances memory efficiency and gradient quality
# BatchNorm Synergy: Larger batches improve BatchNorm statistics quality
batch_size: 128

# BREAKTHROUGH: Batch Normalization enables higher learning rates
# Citation: Ioffe & Szegedy (ICML 2015) - "allows us to use much higher learning rates"
# Evidence: "14× faster training" demonstrated in paper
# Conservative Increase: 2e-3 vs standard 1e-3 (2× increase)
learning_rate: 2.0e-3

# Citation: "Fixing Weight Decay Regularization in Adam" (Loshchilov & Hutter, ICLR 2017)
# Standard Practice: 1e-4 provides good regularization without over-constraining
# Decoupled from learning rate in AdamW optimizer
weight_decay: 1.0e-4

# Training Stability from Batch Normalization
# Citation: Ioffe & Szegedy showed BN reduces training variance and improves stability
# Rationale: More patience (50 vs typical 10-20) because stable training expected
# Conservative: Allows for slower but more reliable convergence
patience: 50

# Citation: "Dropout: A Simple Way to Prevent Neural Networks from Overfitting" (Srivastava et al., 2014)
# Standard Practice: 80/20 train/validation split provides robust performance estimation
# Sufficient Statistics: 20k validation samples adequate for 4-parameter regression
val_split: 0.2

# Computational Efficiency: Evaluate every epoch for close monitoring
# Justification: Stable training from BatchNorm allows frequent evaluation without overhead concerns
eval_interval: 1

evaluation:
# Statistical Power: 5k test samples provides robust performance estimates
# Citation: Central Limit Theorem - sufficient for reliable mean/variance estimates
# Practical: Balances evaluation thoroughness with computational cost
test_samples: 5000

# Reproducibility: Different seed ensures test set independence from training
seed: 58

output:
# Environment Integration: Uses SHEARNET_DATA_PATH for consistent data management
save_path: null # Will use SHEARNET_DATA_PATH/model_checkpoint if null
plot_path: null # Will use SHEARNET_DATA_PATH/plots if null

model_name: "research_backed_galaxy_resnet_high_noise"

plotting:
# Scientific Communication: Visual validation crucial for astronomical applications
# Enables learning curve analysis and performance visualization
plot: true

comparison:
# Metacalibration: Gold standard for weak lensing shape measurement
# Citation: "Metacalibration" (Huff & Mandelbaum, 2017) - optimal shear calibration method
mcal: true

# NGmix: Established maximum likelihood galaxy fitting
# Citation: "ngmix: galaxy shape measurement" (Sheldon, 2014) - widely used in surveys
ngmix: true

# Model Choices: Gaussian models for both PSF and galaxy
# Rationale: Simple, robust baselines for comparison with neural approach
# Conservative: Avoids overfitting in traditional methods for fair comparison
psf_model: "gauss"
gal_model: "gauss"
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