Soedinglab MMseqs2 Software Package

This package provides Soedinglab MMseqs2 binaries for the Platforma Backend system.

Reference

https://github.com/soedinglab/MMseqs2

Installation

npm install @platforma-open/soedinglab.software-mmseqs2

Usage

The package provides MMseqs2 binaries for various platforms. The binaries are automatically selected based on the host system.

Version Upgrade Instructions

To upgrade to a new version of MMseqs2:

1. Prepare new binaries:

   • Download or build the new MMseqs2 binaries for all supported platforms
   • Place them in the dld/ directory with the following naming convention:

     dld/mmseqs2-linux-x64
     dld/mmseqs2-linux-aarch64
     dld/mmseqs2-macosx-x64
     dld/mmseqs2-macosx-aarch64
     dld/mmseqs2-windows-x64
     

2. Update package.json:

   • Bump the package version field in package.json

3. Commit changes to the repository and push them to main branch, so CI do the release for you.

If you need to build and publish it manually, just run npm publish If you need to build it manually without publishing, run npm run pkg:build

Supported Platforms

• Linux (x64, aarch64)
• macOS (x64, aarch64)
• Windows (x64)

License

UNLICENSED