Changed forChannel and forModule to better handle ranges.#212

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ksmith0 wants to merge 257 commits intodevfrom

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Commits on Dec 2, 2016

Poll2 parse debugging updated.

Karl Smith
authored and
spaulaus
committed
Poll2 parse debug message correction.

Karl Smith
authored and
spaulaus
committed
Poll2 parse errors display each error.

Karl Smith
authored and
spaulaus
committed
pread/write uses ranges and reads hex input.

Karl Smith
authored and
spaulaus
committed
Improved efficiency of Gsl2Fitter
spaulaus
committed
Named a magic number in the Gsl2Fitter.cpp
spaulaus
committed
Addressing scoping change in Fitting Analyzer.
spaulaus
committed
Removed unnecessary header and fixed if statement.
spaulaus
committed
Fixes compilation issues with Gsl1Fitter

tking53
authored and
spaulaus
committed
Adding cmake to find UnitTest++ for performing unit tests

spaulaus
authored and
sztaylor89
committed
Preparing to add some unit tests for the core classes

spaulaus
authored and
sztaylor89
committed
Fixed up compilation so that we can build the unit tests for Core

spaulaus
authored and
sztaylor89
committed
Adding unit tests for testing the output of the Model methods

spaulaus
authored and
sztaylor89
committed
Writing tests for Identifier

spaulaus
authored and
sztaylor89
committed
Adding test fixture to test the GetCorrection method.

spaulaus
authored and
sztaylor89
committed
Moved where we look for the UnitTest++ library and added new flag

spaulaus
authored and
sztaylor89
committed
Updated cmake module to look for the default UnitTest++ install dir.

spaulaus
authored and
sztaylor89
committed
Removed pixie16app_defs.h from the Scan side of the project
spaulaus
committed

Commits on Dec 7, 2016

Changed poll2 reboot message. (#145)
ksmith0
authored

Commits on Dec 8, 2016

Revised booting to inspect module type.(Multiconf)

Karl Smith
authored and
spaulaus
committed
Updated FindPXI to allow user modification.

Karl Smith
authored and
spaulaus
committed
Updated FindPXI module.

Karl Smith
authored and
spaulaus
committed
Added multiple ModuleType warning and ignore.

Karl Smith
authored and
spaulaus
committed
Updated FindPXI to look in /opt/xia/software

Karl Smith
authored and
spaulaus
committed
FindPXI PXI_CONFIG for revd

Karl Smith
authored and
spaulaus
committed
Changed PXI_CONFIG for revd modules

Karl Smith
authored and
spaulaus
committed
Removed comment around PixieInterface::Boot

Karl Smith
authored and
spaulaus
committed
Updated PrintModuleInfo.

Karl Smith
authored and
spaulaus
committed
Amended pixie.cfg error messages.

Karl Smith
authored and
spaulaus
committed
Added pixie.cfg readme block.

Karl Smith
authored and
spaulaus
committed
Updated Configuration File Parse to be more strict.

Karl Smith
authored and
spaulaus
committed
Adjusted Read Configuration to list Base Dir.

Karl Smith
authored and
spaulaus
committed

Commits on Dec 13, 2016

Corrected mod-chan range '-1' issue.

Karl Smith
authored and
spaulaus
committed
Added ranges to pmread / pmwrite & hex capability.

Karl Smith
authored and
spaulaus
committed
Added ranges to adjust_offsets.

Karl Smith
authored and
spaulaus
committed
Added ranges to toggle.

Karl Smith
authored and
spaulaus
committed
Changed pmwrite / adjust_offsets DSP write.

Karl Smith
authored and
spaulaus
committed
Added hex capability to csr_test.

Karl Smith
authored and
spaulaus
committed
Updated CTerminalTest to display TERM.

Karl Smith
authored and
spaulaus
committed

Commits on Dec 19, 2016

Abstracted ROOT canvas from scope to RootScanner.

Karl Smith
authored and
spaulaus
committed

Commits on Jan 2, 2017

Update to gitIgnore to exclude doxywarning.txt

tking53
authored and
spaulaus
committed
Added doxywarning.txt/ Changed doc/doxyfile

tking53
authored and
spaulaus
committed
Fixing doxygen build
spaulaus
committed

Commits on Jan 3, 2017

Removing list of known detectors.
spaulaus
committed
Added new cfd algorithm

Cory R. Thornsberry
authored and
spaulaus
committed
Removed ChannelEvent::CorrectBaseline()

Cory R. Thornsberry
authored and
spaulaus
committed
Now save pol3 params inside ChannelEvent class

Cory R. Thornsberry
authored and
spaulaus
committed
Added cfd polynomials to scope

Cory R. Thornsberry
authored and
spaulaus
committed
Fixed 2nd and 3rd order polynomial rounding error

Cory R. Thornsberry
authored and
spaulaus
committed
Removed debug statements from XiaData.cpp

Cory R. Thornsberry
authored and
spaulaus
committed
Updated calculateP3 function for readability

Cory R. Thornsberry
authored and
spaulaus
committed
Creating the HelperFunction header. Rearranging files to generalize.
spaulaus
committed
Updated helper functions to add the TailRatio calculation
spaulaus
committed
Templating the helper functions for more flexibility
spaulaus
committed
Forgot to template the Polynomial functions
spaulaus
committed
FitDriver is now TimingDriver. Adding and updating tests
spaulaus
committed
Fixing variable length array warning.
spaulaus
committed
Moving Trace Information for Unittests to dedicated file
spaulaus
committed
Updating example trace and TimingDriver
spaulaus
committed
Updating utkscan to use the new HelperFunctions.
spaulaus
committed
Fixing errors in CalculatePoly2 and updating tests
spaulaus
committed
Fixing issue in the GetPhase method of HighResTimingData
spaulaus
committed
PolynomialCfd is now implemented.
spaulaus
committed
Implementing TraditionalCfd
spaulaus
committed
Adding baseline subtraction to the trace
spaulaus
committed
Set the CFDs to only work on baseline subtracted traces.
spaulaus
committed
Adding some TODOs to the Unpacker
spaulaus
committed
Making changes to address issues raised by @ksmith0
spaulaus
committed
Updated terminal to handle ASCII codes for BS/DEL.

Karl Smith
authored and
spaulaus
committed

Commits on Jan 4, 2017

Adding unit tests for the new Decoder

spaulaus
authored and
ksmith0
committed
Creating class that provides XIA bit masks and bit shifts f

spaulaus
authored and
ksmith0
committed
Updating XiaData, adding unit tests, Updating XiaListModeDataMask

spaulaus
authored and
ksmith0
committed
The encoder class is now complete enough to deploy.

spaulaus
authored and
ksmith0
committed
Updating Decoder and Mask to handle CFD info and Time Calculations

spaulaus
authored and
ksmith0
committed
Updating decoder to return a vector of pointers to the newed data

spaulaus
authored and
ksmith0
committed
Data can be scanned properly with utkscan. Updated files for changes

spaulaus
authored and
ksmith0
committed
Updating scope to handle new access to traces.

spaulaus
authored and
ksmith0
committed
Rearranging location of Unit Test Test data to make it more useful

spaulaus
authored and
ksmith0
committed
Fixing issues found during review process

spaulaus
authored and
ksmith0
committed

Commits on Jan 6, 2017

Added GetOutputName to globals

tking53
authored and
spaulaus
committed
Making Requested Changes

tking53
authored and
spaulaus
committed

Commits on Jan 10, 2017

Adding simple Jenkinsfile to tracking

spaulaus
authored and
tking53
committed
some simple updates

spaulaus
authored and
tking53
committed
Fixing some header issues

spaulaus
authored and
tking53
committed
Few more missing headers

spaulaus
authored and
tking53
committed
Removing Jenkins file from tracking since its unnecessary.

spaulaus
authored and
tking53
committed
Fixing HelperFunction unit test so that all tests pass

spaulaus
authored and
tking53
committed
Fixing issues with GslFitters, Unit Tests.

spaulaus
authored and
tking53
committed
Removing unnecessary Cmake Flag

spaulaus
authored and
tking53
committed
Fixing bug in Gsl1Fitter

spaulaus
authored and
tking53
committed
Remvoing constexpr since it requires c++std11

spaulaus
authored and
tking53
committed
Some more updates to get compiled on kqxhc

spaulaus
authored and
tking53
committed

Commits on Jan 13, 2017

Fixed pld format incorrect max_spill_size

Cory R. Thornsberry
authored and
tking53
committed
Fixed pld format run number display

Cory R. Thornsberry
authored and
tking53
committed
Fixed ldf header not being initialized properly

Cory R. Thornsberry
authored and
tking53
committed
Fixed pld ACQ time not being set correctly

Cory R. Thornsberry
authored and
tking53
committed
Removing throw for Bad Event Length error

spaulaus
authored and
tking53
committed
Just skipping ahead in the buffer is a bad idea.

spaulaus
authored and
tking53
committed
Updated error message to include module number

spaulaus
authored and
tking53
committed
Adding a missing header.

spaulaus
authored and
tking53
committed
Now properly handling the sign of the x^2 coefficient
spaulaus
committed
If the USE_ROOT Flag was turned off, then we couldn't compile ScanLib

spaulaus
authored and
tking53
committed
Updating TemplateExpProcessor to remove warnings.

spaulaus
authored and
tking53
committed
Adding TwoChanTimingProcessor to compilation

spaulaus
authored and
tking53
committed
Adding IS600Processor to compilation

spaulaus
authored and
tking53
committed
Removing the E11006Processor since it is not needed

spaulaus
authored and
tking53
committed
Some Processors require ROOT to function.

spaulaus
authored and
tking53
committed
Updating Anl1471Processor

spaulaus
authored and
tking53
committed
Adding VandleOrnl2012Processor.

spaulaus
authored and
tking53
committed
Undesired change snuck into DetectorDriver

spaulaus
authored and
tking53
committed
Fix to prevent scope from segfaulting.

spaulaus
authored and
tking53
committed
Fixing bug in the Waveform and Fitting Analyzers

spaulaus
authored and
tking53
committed

Commits on Jan 18, 2017

Fixing issue #168

spaulaus
authored and
sztaylor89
committed
Actually fixing #168

spaulaus
authored and
sztaylor89
committed

Commits on Jan 20, 2017

Closes #181

spaulaus
authored and
ksmith0
committed

Commits on Jan 23, 2017

Resolves #186

spaulaus
authored and
ksmith0
committed
Fixing error on the extrapolated maximum

spaulaus
authored and
ksmith0
committed
Resolves #191 - Skeleton failes to compile with HRIBF Libs

spaulaus
authored and
ksmith0
committed

Commits on Jan 25, 2017

Commits on Feb 1, 2017

Updating doxyfile to accomodate changes to directory structure.

spaulaus
authored and
ksmith0
committed
Tells the user where to go to find more information about the firmware.

spaulaus
authored and
ksmith0
committed
Adjusting output to tell user where they can locally find info.

spaulaus
authored and
ksmith0
committed
Accounting for changes in the directory structure.

spaulaus
authored and
ksmith0
committed
Fixed incorrect DATA buffer size due to spill footer

Cory R. Thornsberry
authored and
ksmith0
committed
Resolves #72

spaulaus
authored and
ksmith0
committed

Commits on Feb 3, 2017

Fixing compiler warnings in utkscan
spaulaus
committed
Resolved an initialization error in HisDrr.cpp

Karl Smith
authored and
spaulaus
committed
Fixes #207 - Adding missing header into the files
spaulaus
committed
Changed default install directory.

Karl Smith
authored and
spaulaus
committed
Corrected messages in FindPXI.cmake

Karl Smith
authored and
spaulaus
committed
Added headers to the columns in monitor.

sburcher
authored and
ksmith0
committed

Commits on Feb 6, 2017

Renamed FindPXI to FindXIA

Karl Smith
authored and
spaulaus
committed
I changed the MAX_FILE_SIZE defintion (Line 55) from 4GB (4294967296) to 2GB (2147483648)

pixie16
authored and
ksmith0
committed

Commits on Feb 7, 2017

Adding in new CMake module to allow for dependent options

spaulaus
authored and
tking53
committed

Commits on Feb 8, 2017

Adding additional check on GSL in the utkscan CMakeLists

spaulaus
authored and
tking53
committed

Commits on Feb 10, 2017

Renaming Clear method to Initialize since that's what it's used for.

spaulaus
authored and
ksmith0
committed
Replacing ChannelEvent with ProcessedXiaData to make it more clear.

spaulaus
authored and
ksmith0
committed
Moving the modified files on this branch to the proper location.

spaulaus
authored and
ksmith0
committed
Making the Trace class more generic moving to ScanLibraries

spaulaus
authored and
ksmith0
committed
Updating Trace class with a few more methods

spaulaus
authored and
ksmith0
committed
Updating the CMakeLists for the ScanLibraries

spaulaus
authored and
ksmith0
committed
ProcessedXiaData now contains the Trace class. Adding Methods.

spaulaus
authored and
ksmith0
committed
Removing ChannelData and ChannelEvent from compilation

spaulaus
authored and
ksmith0
committed
Fixing assignment in ProcessedXiaData::SetIsValidData

spaulaus
authored and
ksmith0
committed
Adding in the GetTrace() method. This overrides the one from the parent

spaulaus
authored and
ksmith0
committed
Changing the way the Trace is accessed.

spaulaus
authored and
ksmith0
committed
Fitting using scope now works as it should.

spaulaus
authored and
ksmith0
committed
Trace class can now accept more input data

spaulaus
authored and
ksmith0
committed
Renaming some of the libraries for clarity.

spaulaus
authored and
ksmith0
committed
Updating TraceAnalyzer Class so that it now handles plotting

spaulaus
authored and
ksmith0
committed
Finishing up the CMakeLists changes.

spaulaus
authored and
ksmith0
committed
Updating the Analyzers so that they now plot correctly.

spaulaus
authored and
ksmith0
committed
These experiment processors were missing a header.

spaulaus
authored and
ksmith0
committed
Finishing up CMakeChanges for realzies.

spaulaus
authored and
ksmith0
committed
More changes related to the changes made in Trace class.

spaulaus
authored and
ksmith0
committed
Updating DetectorDriver so that it access trace information properly.

spaulaus
authored and
ksmith0
committed
Removin the files that are no longer needed.

spaulaus
authored and
ksmith0
committed
Removing ProcessedXiaData cpp since everythings handled in the header.

spaulaus
authored and
ksmith0
committed
Adding the signal to noise ratio calcualtion to the Trace class.

spaulaus
authored and
ksmith0
committed
Major overhaul to the data classes is complete

spaulaus
authored and
ksmith0
committed
Fixing header issue that prevented compilation on kqxhc

spaulaus
authored and
ksmith0
committed
Fixing issue with histograms for the Analyzers.

spaulaus
authored and
ksmith0
committed
Added parenthesis to BarBuilder to be explicit.

Karl Smith
authored and
ksmith0
committed
Resolves Issue #224 - build fails when one of XIA or PLX is installed

spaulaus
authored and
ksmith0
committed
Adjusted build sot hat the set2* programs will still build

spaulaus
authored and
ksmith0
committed

Commits on Feb 13, 2017

Updated cmake options to be prepended with PAASS_.

spaulaus
authored and
tking53
committed
Missed prepending one of the USE_NCURSES with PAASS_

spaulaus
authored and
tking53
committed

Commits on Feb 28, 2017

Adding header that contains functions related to string manipulation

spaulaus
authored and
mvostinar
committed
Removing string namespace from utkscan::Globals

spaulaus
authored and
mvostinar
committed
Most of the constants defined in the Globals class were unused

spaulaus
authored and
mvostinar
committed
Removing the unnecessary NAN definition.

spaulaus
authored and
mvostinar
committed
XmlInterface compiles without issues

spaulaus
authored and
mvostinar
committed
Globals has been updated to use the XmlInterface class

spaulaus
authored and
mvostinar
committed
Adding a header that contains various constants.

spaulaus
authored and
mvostinar
committed
Adding a function to convert seconds to different time units.

spaulaus
authored and
mvostinar
committed
Updating messages in the XmlInterface

spaulaus
authored and
mvostinar
committed
Removing Xml Parsing from Globals into XmlParser class

spaulaus
authored and
mvostinar
committed
Updating analyzers to use the new Globals methods.

spaulaus
authored and
mvostinar
committed
Updating utkscan Core to use the new Globals methods

spaulaus
authored and
mvostinar
committed
Updating EventProcessors to use the new Globals Methods.

spaulaus
authored and
mvostinar
committed
Updating pugixml source code

spaulaus
authored and
mvostinar
committed
Abstracting the XmlParser and moving to Resources

spaulaus
authored and
mvostinar
committed
Making the error checking methods protected instead of private

spaulaus
authored and
mvostinar
committed
Adding GlobalsXmlParser

spaulaus
authored and
mvostinar
committed
Updaing the XmlInterface error message to contian pugixml info

spaulaus
authored and
mvostinar
committed
The MapNodeXmlParser has taken over from DetectorLibrary

spaulaus
authored and
mvostinar
committed
MapNodeXmlParser handles everything in the map node.

spaulaus
authored and
mvostinar
committed
Processors are now parsed and loaded via the DetectorDriverXmlParser

spaulaus
authored and
mvostinar
committed
Notebook is now updated to use the XmlInterface

spaulaus
authored and
mvostinar
committed
XML parsing removed from TreeCorrelator and into TreeCorrelatorXmlParser

spaulaus
authored and
mvostinar
committed
Removing the last remains of XML from the Globals Class.

spaulaus
authored and
mvostinar
committed
Now loading the configuration in UtkScanInterface::Initalize

spaulaus
authored and
mvostinar
committed
Fixing error message so that it outputs the proper node name.

spaulaus
authored and
mvostinar
committed
Updating TraceAnalyzers so that it is not initalized before everything

spaulaus
authored and
mvostinar
committed
Fixing the TraceExtractor so that it plots traces properly.

spaulaus
authored and
mvostinar
committed
Changing how the output file is handled. Provides more flexibility.

spaulaus
authored and
mvostinar
committed
Updating processor to use the appropriate output methods.

spaulaus
authored and
mvostinar
committed
Fixing bug in GlobalsXmlParser where fitting parameters weren't read.

spaulaus
authored and
mvostinar
committed
Updating issues found during review.

spaulaus
authored and
mvostinar
committed
Reorganising the order that include directories happen.

spaulaus
authored and
mvostinar
committed
Adding missing header file to the XmlParser.

spaulaus
authored and
mvostinar
committed
Updated UnitTestSampleData to have the QDC for the trace.

spaulaus
authored and
mvostinar
committed
Updating RootFitter so that it fits properly. Updating unit tests.

spaulaus
authored and
mvostinar
committed
Updating FittingAnalyzer to enable use of RootFitter.

spaulaus
authored and
mvostinar
committed
Updating the TwoChannelTimingProcessor to facilitiate easier testing.

spaulaus
authored and
mvostinar
committed
Updating TwoChanTimingProcessor to include more plots.

spaulaus
authored and
mvostinar
committed
Updating the VandleTimingFunction

spaulaus
authored and
mvostinar
committed
Modifying if statement for simplicity

spaulaus
authored and
mvostinar
committed
Removing unused header from RootFitter.cpp

spaulaus
authored and
mvostinar
committed
Updating the headers for the RootFitter.

spaulaus
authored and
mvostinar
committed
Updating scope so that it performs the fit with the defined function

spaulaus
authored and
mvostinar
committed
Removing all mention of ADC_TIME_STEP

spaulaus
authored and
mvostinar
committed
Resolving missing header on test machine.

spaulaus
authored and
mvostinar
committed
Fixing issue when root is missing from the system.

spaulaus
authored and
mvostinar
committed

Commits on Mar 1, 2017

Add Clarification to the 2 functions that return baseline information

tking53
authored and
spaulaus
committed
Making requested Changes

tking53
authored and
spaulaus
committed

Commits on Mar 3, 2017

Files are now organized more coherently. Code compiles as expected.

spaulaus
authored and
mvostinar
committed

Commits on Mar 6, 2017

Resloves Issue #240

spaulaus
authored and
tking53
committed
Removing amplitude check in the GslFitter unittest

spaulaus
authored and
tking53
committed
Resolves #247 - Bad logic in the GlobalsXmlParser::ParseRejectNode

spaulaus
authored and
tking53
committed

Commits on Mar 20, 2017

UtkUnpacker.cpp was modified to load eventWidth from Globals

rin-yokoyama
authored and
tking53
committed
requested change to #254

rin-yokoyama
authored and
tking53
committed

Commits on Mar 25, 2017

UtkUnpacker.cpp was modified to load eventWidth from Globals

rin-yokoyama
authored and
tking53
committed
requested change to #254

rin-yokoyama
authored and
tking53
committed
event width initialization moved to UtkScanInterface::Initialize()

rin-yokoyama
authored and
tking53
committed

Commits on May 12, 2017

Commits on May 15, 2017

Commits on Jun 7, 2017

Channged forChannel and forModule to better handle ranges.

Karl Smith
authored and
ksmith0
committed