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@dependabot dependabot bot commented on behalf of github Jan 16, 2025

Bumps the pip group with 7 updates in the /scripts directory:

Package From To
requests 2.20.0 2.32.2
ujson 1.33 5.4.0
fiona 1.6.3.post1 1.10.0
future 0.15.2 0.18.3
gevent 1.1.2 23.9.0
lxml 4.6.3 4.9.1
numpy 1.10.4 1.22.0

Updates requests from 2.20.0 to 2.32.2

Release notes

Sourced from requests's releases.

v2.32.2

2.32.2 (2024-05-21)

Deprecations

  • To provide a more stable migration for custom HTTPAdapters impacted by the CVE changes in 2.32.0, we've renamed _get_connection to a new public API, get_connection_with_tls_context. Existing custom HTTPAdapters will need to migrate their code to use this new API. get_connection is considered deprecated in all versions of Requests>=2.32.0.

    A minimal (2-line) example has been provided in the linked PR to ease migration, but we strongly urge users to evaluate if their custom adapter is subject to the same issue described in CVE-2024-35195. (#6710)

v2.32.1

2.32.1 (2024-05-20)

Bugfixes

  • Add missing test certs to the sdist distributed on PyPI.

v2.32.0

2.32.0 (2024-05-20)

🐍 PYCON US 2024 EDITION 🐍

Security

  • Fixed an issue where setting verify=False on the first request from a Session will cause subsequent requests to the same origin to also ignore cert verification, regardless of the value of verify. (GHSA-9wx4-h78v-vm56)

Improvements

  • verify=True now reuses a global SSLContext which should improve request time variance between first and subsequent requests. It should also minimize certificate load time on Windows systems when using a Python version built with OpenSSL 3.x. (#6667)
  • Requests now supports optional use of character detection (chardet or charset_normalizer) when repackaged or vendored. This enables pip and other projects to minimize their vendoring surface area. The Response.text() and apparent_encoding APIs will default to utf-8 if neither library is present. (#6702)

Bugfixes

  • Fixed bug in length detection where emoji length was incorrectly calculated in the request content-length. (#6589)
  • Fixed deserialization bug in JSONDecodeError. (#6629)
  • Fixed bug where an extra leading / (path separator) could lead urllib3 to unnecessarily reparse the request URI. (#6644)

... (truncated)

Changelog

Sourced from requests's changelog.

2.32.2 (2024-05-21)

Deprecations

  • To provide a more stable migration for custom HTTPAdapters impacted by the CVE changes in 2.32.0, we've renamed _get_connection to a new public API, get_connection_with_tls_context. Existing custom HTTPAdapters will need to migrate their code to use this new API. get_connection is considered deprecated in all versions of Requests>=2.32.0.

    A minimal (2-line) example has been provided in the linked PR to ease migration, but we strongly urge users to evaluate if their custom adapter is subject to the same issue described in CVE-2024-35195. (#6710)

2.32.1 (2024-05-20)

Bugfixes

  • Add missing test certs to the sdist distributed on PyPI.

2.32.0 (2024-05-20)

Security

  • Fixed an issue where setting verify=False on the first request from a Session will cause subsequent requests to the same origin to also ignore cert verification, regardless of the value of verify. (GHSA-9wx4-h78v-vm56)

Improvements

  • verify=True now reuses a global SSLContext which should improve request time variance between first and subsequent requests. It should also minimize certificate load time on Windows systems when using a Python version built with OpenSSL 3.x. (#6667)
  • Requests now supports optional use of character detection (chardet or charset_normalizer) when repackaged or vendored. This enables pip and other projects to minimize their vendoring surface area. The Response.text() and apparent_encoding APIs will default to utf-8 if neither library is present. (#6702)

Bugfixes

  • Fixed bug in length detection where emoji length was incorrectly calculated in the request content-length. (#6589)
  • Fixed deserialization bug in JSONDecodeError. (#6629)
  • Fixed bug where an extra leading / (path separator) could lead urllib3 to unnecessarily reparse the request URI. (#6644)

Deprecations

... (truncated)

Commits
  • 88dce9d v2.32.2
  • c98e4d1 Merge pull request #6710 from nateprewitt/api_rename
  • 92075b3 Add deprecation warning
  • aa1461b Move _get_connection to get_connection_with_tls_context
  • 970e8ce v2.32.1
  • d6ebc4a v2.32.0
  • 9a40d12 Avoid reloading root certificates to improve concurrent performance (#6667)
  • 0c030f7 Merge pull request #6702 from nateprewitt/no_char_detection
  • 555b870 Allow character detection dependencies to be optional in post-packaging steps
  • d6dded3 Merge pull request #6700 from franekmagiera/update-redirect-to-invalid-uri-test
  • Additional commits viewable in compare view

Updates ujson from 1.33 to 5.4.0

Release notes

Sourced from ujson's releases.

5.4.0

Added

Fixed

5.3.0

Added

Changed

Fixed

5.2.0

Added

Fixed

5.1.0

Changed

... (truncated)

Commits

Updates fiona from 1.6.3.post1 to 1.10.0

Release notes

Sourced from fiona's releases.

1.10.0

This is 1.10.0. At last! The project has added 25 new contributors since 1.9.0, for a total of 73.

Fiona 1.10 will continue to support classic GIS programming work with a record-style data model. Rows, that is, not columns.

The changes since 1.9.6 are fully described in the changelog, split across pre-releases. Here is a high-level summary.

Deprecations

  • Python-style filter expressions for CLI commands are being replaced by Lisp-like expressions.
  • Some constants in the fiona.schema module will be removed in a future version.
  • The fiona.path module will be removed in a future version. This, and the previously mentioned constants, were not meant to be used by projects downstream.

New features

  • Python openers can connect filesystems implemented in Python, like fsspec or tiledb.vfs, to GDAL's own virtual filesystem machinery. In most cases, you should reply on GDAL's built-in virtual filesystem handlers. On the other hand, if you have unique or proprietary data access protocols, then fiona's new openers may be useful.
  • Fiona's CLI has three new commands, filter (strictly speaking, a new mode of this command), map, and reduce. These provide some great features for Unix-style data processing pipelines and are designed to work well with jq and programs of that nature.

Other changes

This version is heavily refactored. If it's not paying off for you, let us know!

PyPI wheels

The binary wheels on PyPI include GDAL 3.9.2 (3.9.1 for Windows), GEOS 3.11.2, and PROJ 9.4.1.

GDAL and Python versions

Fiona 1.10.0 requires GDAL 3.4 and Python 3.8 or newer.

1.10.0rc1

This is the first release candidate for 1.10.0.

Changes

  • Mutable item access to Feature, Geometry, and Properties instances has been restored (reported in #1430). This usage should be avoided as instances of these classes will be immutable in a future version.
  • The setup.cfg duplicates project configuration in pyproject.toml and has been removed.

Packaging

  • PyPI wheels include GDAL 3.9.2.

Please see the CHANGES file for a more detailed enumeration of changes since version 1.10b1. Unless showstopper bugs are found in this release, expect a final 1.10.0 release in two weeks.

1.10b3

Bug fixes

  • The sketchy, semi-private Python opener interfaces of version 1.10b2 have been replaced by ABCs that are exported from fiona.abc (#1415). How to implement the interfaces and provide a custom opener is documented in test_pyopener.py and will be included in the documentation for version 1.10.0.
  • The truncate GDAL VSI plugin callback has been implemented (#1413).

... (truncated)

Changelog

Sourced from fiona's changelog.

1.10.0 (2024-09-03)

The package version, credits, and citation file have been updated. There have been no other changes since 1.10.0rc1. Fiona is the work of 73 contributors, including 25 new contributors since 1.9.0.

1.10.0rc1 (2024-08-21)

This is the first release candidate for 1.10.0.

Changes:

  • Mutable item access to Feature, Geometry, and Properties instances has been restored (reported in #1430). This usage should be avoided as instances of these classes will be immutable in a future version.
  • The setup.cfg duplicates project configuration in pyproject.toml and has been removed.

1.10b3 (2024-07-29)

Bug fixes:

  • The sketchy, semi-private Python opener interfaces of version 1.10b2 have been replaced by ABCs that are exported from fiona.abc (#1415).
  • The truncate VSI plugin callback has been implemented (#1413).

1.10b2 (2024-07-10)

Bug fixes:

  • The Pyopener registry and VSI plugin have been rewritten to avoid filename conflicts and to be compatible with multithreading. Now, a new plugin handler is registered for each instance of using an opener (#1408). Before GDAL 3.9.0 plugin handlers cannot not be removed and so it may be observed that the size of the Pyopener registry grows during the execution of a program.
  • A CSLConstList ctypedef has been added and is used where appropriate (#1404).
  • Fiona model objects have a informative, printable representation again (#1380).

Packaging:

  • PyPI wheels include GDAL 3.9.1 and curl 8.8.0.

1.10b1 (2024-04-16)

... (truncated)

Commits

Updates future from 0.15.2 to 0.18.3

Release notes

Sourced from future's releases.

v0.18.3

This is a minor bug-fix release containing a number of fixes:

  • Backport fix for bpo-38804 (c91d70b)
  • Fix bug in fix_print.py fixer (dffc579)
  • Fix bug in fix_raise.py fixer (3401099)
  • Fix newint bool in py3 (fe645ba)
  • Fix bug in super() with metaclasses (6e27aac)
  • docs: fix simple typo, reqest -> request (974eb1f)
  • Correct eq (c780bf5)
  • Pass if lint fails (2abe00d)
  • Update docker image and parcel out to constant variable. Add comment to update version constant (45cf382)
  • fix order (f96a219)
  • Add flake8 to image (046ff18)
  • Make lint.sh executable (58cc984)
  • Add docker push to optimize CI (01e8440)
  • Build System (42b3025)
  • Add docs build status badge to README.md (3f40bd7)
  • Use same docs requirements in tox (18ecc5a)
  • Add docs/requirements.txt (5f9893f)
  • Add PY37_PLUS, PY38_PLUS, and PY39_PLUS (bee0247)
  • fix 2.6 test, better comment (ddedcb9)
  • fix 2.6 test (3f1ff7e)
  • remove nan test (4dbded1)
  • include list test values (e3f1a12)
  • fix other python2 test issues (c051026)
  • fix missing subTest (f006cad)
  • import from old imp library on older python versions (fc84fa8)
  • replace fstrings with format for python 3.4,3.5 (4a687ea)
  • minor style/spelling fixes (8302d8c)
  • improve cmp function, add unittest (0d95a40)
  • Pin typing==3.7.4.1 for Python 3.3 compatiblity (1a48f1b)
  • Fix various py26 unit test failures (9ca5a14)
  • Add initial contributing guide with docs build instruction (e55f915)
  • Add docs building to tox.ini (3ee9e7f)
  • Support NumPy's specialized int types in builtins.round (b4b54f0)
  • Added r""" to the docstring to avoid warnings in python3 (5f94572)
  • Add subclasscheck for past.types.basestring (c9bc0ff)
  • Correct example in README (681e78c)
  • Add simple documentation (6c6e3ae)
  • Add pre-commit hooks (a9c6a37)
  • Handling of next and next by future.utils.get_next was reversed (52b0ff9)
  • Add a test for our fix (461d77e)
  • Compare headers to correct definition of str (3eaa8fd)
  • #322 Add support for negative ndigits in round; additionally, fixing a bug so that it handles passing in Decimal properly (a4911b9)
  • Add tkFileDialog to future.movers.tkinter (f6a6549)
  • Sort before comparing dicts in TestChainMap (6126997)
  • Fix typo (4dfa099)
  • Fix formatting in "What's new" (1663dfa)
  • Fix typo (4236061)

... (truncated)

Changelog

Sourced from future's changelog.

Changes in version 0.18.3 (2023-01-13)

This is a minor bug-fix release containing a number of fixes:

  • Backport fix for bpo-38804 (c91d70b)
  • Fix bug in fix_print.py fixer (dffc579)
  • Fix bug in fix_raise.py fixer (3401099)
  • Fix newint bool in py3 (fe645ba)
  • Fix bug in super() with metaclasses (6e27aac)
  • docs: fix simple typo, reqest -> request (974eb1f)
  • Correct eq (c780bf5)
  • Pass if lint fails (2abe00d)
  • Update docker image and parcel out to constant variable. Add comment to update version constant (45cf382)
  • fix order (f96a219)
  • Add flake8 to image (046ff18)
  • Make lint.sh executable (58cc984)
  • Add docker push to optimize CI (01e8440)
  • Build System (42b3025)
  • Add docs build status badge to README.md (3f40bd7)
  • Use same docs requirements in tox (18ecc5a)
  • Add docs/requirements.txt (5f9893f)
  • Add PY37_PLUS, PY38_PLUS, and PY39_PLUS (bee0247)
  • fix 2.6 test, better comment (ddedcb9)
  • fix 2.6 test (3f1ff7e)
  • remove nan test (4dbded1)
  • include list test values (e3f1a12)
  • fix other python2 test issues (c051026)
  • fix missing subTest (f006cad)
  • import from old imp library on older python versions (fc84fa8)
  • replace fstrings with format for python 3.4,3.5 (4a687ea)
  • minor style/spelling fixes (8302d8c)
  • improve cmp function, add unittest (0d95a40)
  • Pin typing==3.7.4.1 for Python 3.3 compatiblity (1a48f1b)
  • Fix various py26 unit test failures (9ca5a14)
  • Add initial contributing guide with docs build instruction (e55f915)
  • Add docs building to tox.ini (3ee9e7f)
  • Support NumPy's specialized int types in builtins.round (b4b54f0)
  • Added r""" to the docstring to avoid warnings in python3 (5f94572)
  • Add subclasscheck for past.types.basestring (c9bc0ff)
  • Correct example in README (681e78c)
  • Add simple documentation (6c6e3ae)
  • Add pre-commit hooks (a9c6a37)
  • Handling of next and next by future.utils.get_next was reversed (52b0ff9)
  • Add a test for our fix (461d77e)
  • Compare headers to correct definition of str (3eaa8fd)
  • #322 Add support for negative ndigits in round; additionally, fixing a bug so that it handles passing in Decimal properly (a4911b9)
  • Add tkFileDialog to future.movers.tkinter (f6a6549)
  • Sort before comparing dicts in TestChainMap (6126997)
  • Fix typo (4dfa099)
  • Fix formatting in "What's new" (1663dfa)

... (truncated)

Commits

Updates gevent from 1.1.2 to 23.9.0

Changelog

Sourced from gevent's changelog.

================== Changes for 1.1

.. currentmodule:: gevent

Commits
  • 693181e Preparing release 23.9.0
  • 6fc7898 Set the cython version; go back to default wheel tags.
  • 666e374 Had the constraint wrong.
  • 74ef876 Tweaking the build, and it seems like the greenlet stack issue should be fixed.
  • b652e2a Error handling adjustments from running under a debug build.
  • 70e7318 Tweaking tests and comments; temporary workarounds for 3.12 to enable builds.
  • 495e37a Workaround the 3.12 traceback issue again.
  • 2f53c85 gevent.pywsgi: Much improved handling of chunk trailers.
  • bb06d2d Test builds with greenlet assertions enabled.
  • 6b22af0 pyproject.toml: Bump to latest cython.
  • Additional commits viewable in compare view

Updates lxml from 4.6.3 to 4.9.1

Changelog

Sourced from lxml's changelog.

4.9.1 (2022-07-01)

Bugs fixed

  • A crash was resolved when using iterwalk() (or canonicalize()) after parsing certain incorrect input. Note that iterwalk() can crash on valid input parsed with the same parser after failing to parse the incorrect input.

4.9.0 (2022-06-01)

Bugs fixed

  • GH#341: The mixin inheritance order in lxml.html was corrected. Patch by xmo-odoo.

Other changes

  • Built with Cython 0.29.30 to adapt to changes in Python 3.11 and 3.12.

  • Wheels include zlib 1.2.12, libxml2 2.9.14 and libxslt 1.1.35 (libxml2 2.9.12+ and libxslt 1.1.34 on Windows).

  • GH#343: Windows-AArch64 build support in Visual Studio. Patch by Steve Dower.

4.8.0 (2022-02-17)

Features added

  • GH#337: Path-like objects are now supported throughout the API instead of just strings. Patch by Henning Janssen.

  • The ElementMaker now supports QName values as tags, which always override the default namespace of the factory.

Bugs fixed

  • GH#338: In lxml.objectify, the XSI float annotation "nan" and "inf" were spelled in lower case, whereas XML Schema datatypes define them as "NaN" and "INF" respectively.

... (truncated)

Commits
  • d01872c Prevent parse failure in new test from leaking into later test runs.
  • d65e632 Prepare release of lxml 4.9.1.
  • 86368e9 Fix a crash when incorrect parser input occurs together with usages of iterwa...
  • 50c2764 Delete unused Travis CI config and reference in docs (GH-345)
  • 8f0bf2d Try to speed up the musllinux AArch64 build by splitting the different CPytho...
  • b9f7074 Remove debug print from test.
  • b224e0f Try to install 'xz' in wheel builds, if available, since it's now needed to e...
  • 897ebfa Update macOS deployment target version from 10.14 to 10.15 since 10.14 starts...
  • 853c9e9 Prepare release of 4.9.0.
  • d3f77e6 Add a test for https://bugs.launchpad.net/lxml/+bug/1965070 leaving out the a...
  • Additional commits viewable in compare view

Updates numpy from 1.10.4 to 1.22.0

Release notes

Sourced from numpy's releases.

v1.22.0

NumPy 1.22.0 Release Notes

NumPy 1.22.0 is a big release featuring the work of 153 contributors spread over 609 pull requests. There have been many improvements, highlights are:

  • Annotations of the main namespace are essentially complete. Upstream is a moving target, so there will likely be further improvements, but the major work is done. This is probably the most user visible enhancement in this release.
  • A preliminary version of the proposed Array-API is provided. This is a step in creating a standard collection of functions that can be used across application such as CuPy and JAX.
  • NumPy now has a DLPack backend. DLPack provides a common interchange format for array (tensor) data.
  • New methods for quantile, percentile, and related functions. The new methods provide a complete set of the methods commonly found in the literature.
  • A new configurable allocator for use by downstream projects.

These are in addition to the ongoing work to provide SIMD support for commonly used functions, improvements to F2PY, and better documentation.

The Python versions supported in this release are 3.8-3.10, Python 3.7 has been dropped. Note that 32 bit wheels are only provided for Python 3.8 and 3.9 on Windows, all other wheels are 64 bits on account of Ubuntu, Fedora, and other Linux distributions dropping 32 bit support. All 64 bit wheels are also linked with 64 bit integer OpenBLAS, which should fix the occasional problems encountered by folks using truly huge arrays.

Expired deprecations

Deprecated numeric style dtype strings have been removed

Using the strings "Bytes0", "Datetime64", "Str0", "Uint32", and "Uint64" as a dtype will now raise a TypeError.

(gh-19539)

Expired deprecations for loads, ndfromtxt, and mafromtxt in npyio

numpy.loads was deprecated in v1.15, with the recommendation that users use pickle.loads instead. ndfromtxt and mafromtxt were both deprecated in v1.17 - users should use numpy.genfromtxt instead with the appropriate value for the usemask parameter.

(gh-19615)

... (truncated)

Commits

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Bumps the pip group with 7 updates in the /scripts directory:

| Package | From | To |
| --- | --- | --- |
| [requests](https://github.com/psf/requests) | `2.20.0` | `2.32.2` |
| [ujson](https://github.com/ultrajson/ultrajson) | `1.33` | `5.4.0` |
| [fiona](https://github.com/Toblerity/Fiona) | `1.6.3.post1` | `1.10.0` |
| [future](https://github.com/PythonCharmers/python-future) | `0.15.2` | `0.18.3` |
| [gevent](https://github.com/gevent/gevent) | `1.1.2` | `23.9.0` |
| [lxml](https://github.com/lxml/lxml) | `4.6.3` | `4.9.1` |
| [numpy](https://github.com/numpy/numpy) | `1.10.4` | `1.22.0` |



Updates `requests` from 2.20.0 to 2.32.2
- [Release notes](https://github.com/psf/requests/releases)
- [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md)
- [Commits](psf/requests@v2.20.0...v2.32.2)

Updates `ujson` from 1.33 to 5.4.0
- [Release notes](https://github.com/ultrajson/ultrajson/releases)
- [Commits](https://github.com/ultrajson/ultrajson/commits/5.4.0)

Updates `fiona` from 1.6.3.post1 to 1.10.0
- [Release notes](https://github.com/Toblerity/Fiona/releases)
- [Changelog](https://github.com/Toblerity/Fiona/blob/main/CHANGES.txt)
- [Commits](Toblerity/Fiona@1.6.3-post1...1.10.0)

Updates `future` from 0.15.2 to 0.18.3
- [Release notes](https://github.com/PythonCharmers/python-future/releases)
- [Changelog](https://github.com/PythonCharmers/python-future/blob/master/docs/changelog.rst)
- [Commits](PythonCharmers/python-future@v0.15.2...v0.18.3)

Updates `gevent` from 1.1.2 to 23.9.0
- [Release notes](https://github.com/gevent/gevent/releases)
- [Changelog](https://github.com/gevent/gevent/blob/master/docs/changelog_1_1.rst)
- [Commits](gevent/gevent@v1.1.2...23.9.0)

Updates `lxml` from 4.6.3 to 4.9.1
- [Release notes](https://github.com/lxml/lxml/releases)
- [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt)
- [Commits](lxml/lxml@lxml-4.6.3...lxml-4.9.1)

Updates `numpy` from 1.10.4 to 1.22.0
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.10.4...v1.22.0)

---
updated-dependencies:
- dependency-name: requests
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: ujson
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: fiona
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: future
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: gevent
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: lxml
  dependency-type: direct:production
  dependency-group: pip
- dependency-name: numpy
  dependency-type: direct:production
  dependency-group: pip
...

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@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Jan 16, 2025
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❌ Jit has detected 1 important finding in this PR that you should review.
The finding is detailed below as a comment.
It’s highly recommended that you fix this security issue before merge.

Repository Risks:

  • Database Integration: Connects to a database, often involving sensitive data that must be securely managed.
  • Critical Severity Findings: Indicates that the resource has critical severity security findings that need immediate action.

Repository Context:

graph LR
    GitHub$Repository_U23_piplcom/libpostal["GitHub Repository<br/>piplcom/libpostal"]:::GitHub$Repository
    Team_U23_security$managers["Team<br/>security managers"]:::Team
    DBIntegration_U23_mongo["DBIntegration<br/>mongo"]:::DBIntegration
    Team_U23_security$managers -- "Owns" --> GitHub$Repository_U23_piplcom/libpostal
    GitHub$Repository_U23_piplcom/libpostal -- "Is accessible to" --> DBIntegration_U23_mongo
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futures==3.0.5
ftfy==4.2.0
gevent==1.1.2
gevent==23.9.0
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Security control: Software Component Analysis Python

Cve-2023-41419, GHSA-x7m3-jprg-wc5g

An issue in Gevent before version 23.9.0 allows a remote attacker to escalate privileges via a crafted script to the WSGIServer component.

Is fix available? Yes, this issue was fixed in version 23.9.0

Severity: HIGH


Jit Bot commands and options (e.g., ignore issue)

You can trigger Jit actions by commenting on this PR review:

  • #jit_ignore_fp Ignore and mark this specific single instance of finding as “False Positive”
  • #jit_ignore_accept Ignore and mark this specific single instance of finding as “Accept Risk”
  • #jit_ignore_type_in_file Ignore any finding of type "CVE-2023-41419, GHSA-x7m3-jprg-wc5g" in scripts/requirements.txt; future occurrences will also be ignored.
  • #jit_undo_ignore Undo ignore command

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