re-architect #34
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re-architect #34
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* update path * fixes #26 * init code only folder init code only folder init code only folder * update * fixes #26 * init installation * fix merging output file when multiple cocultures, based on gating and/or uncertainty filtering * add pyqt5 for docs * enable show code * update documentation * addresses comments on #28 * add requirement and note * fine stain messages
this folder is redundant with the new docs
* update path * fixes #26 * init code only folder init code only folder init code only folder * update * fixes #26 * init installation * fix merging output file when multiple cocultures, based on gating and/or uncertainty filtering * add pyqt5 for docs * enable show code * update documentation * addresses comments on #28 * add requirement and note * fine stain messages * addresses #30 * fixes #31; we used to have the wrong order of the flags of the two stains; stain 1 is cell and 2 is dead as initial values * fixes #30; channels having two names both in axis and in gating * load features only when needed * minor updates
* clean and fix stain assignment in training panel * 2.0.1 docker
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This PR changes the tree of the repo in a more Python package-like way.
It also fixes a number of major issues: