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Support for parallelism/multi-threading

Status: Open.

#153 In mortazavilab/PyWGCNA;

· fantauzzi opened on Jan 11, 2026

SVD for module eigen gene instead of PCA or eigendecomposition of a similarity matrix

Status: Open.

#152 In mortazavilab/PyWGCNA;

· DCalhas opened on Jan 8, 2026

Coexpression Module Plot creates unpredictable plots when more than one module is passed

Status: Open.

#151 In mortazavilab/PyWGCNA;

· annaliesemeyer opened on Nov 7, 2025

Error for the quick start tutorial, I use Python 3.13.7

Status: Open.

#150 In mortazavilab/PyWGCNA;

· yudalang3 opened on Nov 6, 2025

cutreeHybrid fails when pamRespectsDendro=True with ValueError: operands could not be broadcast together with shapes

Status: Open.

#149 In mortazavilab/PyWGCNA;

· potulabe opened on Nov 5, 2025

Formatting for time series data with two replicates?

Status: Open.

#146 In mortazavilab/PyWGCNA;

· serenalotreck opened on Jul 24, 2025

'NoneType' object has no attribute 'render' when using CoexpressionModulePlot

Status: Open.

#145 In mortazavilab/PyWGCNA;

· realzhipeng opened on Jul 22, 2025

not possible to see gene significance value?

Status: Open.

#144 In mortazavilab/PyWGCNA;

· realzhipeng opened on Jul 22, 2025

barplotModuleEigenGene() Error w/ Tutorial and Data - colorBar

Status: Open.

#143 In mortazavilab/PyWGCNA;

· park-minjun opened on Jul 8, 2025

Custom input distance matrix?

Status: Open.

#142 In mortazavilab/PyWGCNA;

· kmuench opened on May 20, 2025

What is the default behavior for unassigned genes?

Status: Open.

#141 In mortazavilab/PyWGCNA;

· lorenzoamir opened on May 5, 2025

AttributeError: Unable to plot module eigengenes

Status: Open.

#140 In mortazavilab/PyWGCNA;

· LornaWessels opened on Mar 7, 2025