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Rationalise deps#36

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bobular wants to merge 2 commits intomasterfrom
rationalise-deps
Draft

Rationalise deps#36
bobular wants to merge 2 commits intomasterfrom
rationalise-deps

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@bobular
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@bobular bobular commented Dec 18, 2025

This draft PR is provisional based on adding

Remotes:
  zdk123/SpiecEasi@v1.0.7

to mbioUtils/DESCRIPTION

I'm pretty sure this is where the dependency should be declared, not here.

However. I'm going to avoid the whole mbioUtils/veupathUtils clash of the titans for now.

@d-callan
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yea spieceasi needed moving and i missed it i guess. can sort that once there is a plan for the future relationship of the two utils packages. in the meantime, i wonder about the maaslin install, the ci still doesnt seem happy

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