Skip to content

pipe wget into bsdtar #77

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
ChristianKniep wants to merge 5 commits into
base: main
Choose a base branch
from
Open

pipe wget into bsdtar #77

Changes from all commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
c83a5ab
pipe wget into bsdtar
ChristianKniep Jan 8, 2025
2186bd3
typo
ChristianKniep Jan 8, 2025
bfdb0fa
add LD_LIBRARY_PATH
ChristianKniep Jan 8, 2025
12f2c3a
change untar dir
ChristianKniep Jan 8, 2025
ef5e43f
export in RUN have no effect
ChristianKniep Jan 8, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
9 changes: 3 additions & 6 deletions Dockerfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ FROM nvidia/cuda:11.7.1-cudnn8-runtime-ubuntu22.04 as devel

# Install essential packages
RUN apt-get update \
&& apt-get install -y wget git unzip curl build-essential zlib1g-dev zstd \
&& apt-get install -y wget git unzip curl build-essential zlib1g-dev zstd libarchive-tools \
&& rm -rf /var/lib/apt/lists/*

# Build minimap2
Expand All @@ -15,10 +15,7 @@ RUN curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y \
&& export PATH="/root/.cargo/bin:${PATH}"

# Get libtorch
RUN wget -q -O libtorch.zip https://download.pytorch.org/libtorch/cu117/libtorch-cxx11-abi-shared-with-deps-2.0.1%2Bcu117.zip \
&& unzip -q libtorch.zip && rm libtorch.zip \
&& export LIBTORCH=/libtorch \
&& export LD_LIBRARY_PATH=${LIBTORCH}/lib:$LD_LIBRARY_PATH
RUN wget -q -O- https://download.pytorch.org/libtorch/cu117/libtorch-cxx11-abi-shared-with-deps-2.0.1%2Bcu117.zip |bsdtar -xf- -C /

# Build herro
# Copy files from host to container
Expand All @@ -45,7 +42,7 @@ RUN apt-get update \

# Set environment variables
ENV LIBTORCH=/libs
ENV LD_LIBRARY_PATH=${LIBTORCH}/lib:$LD_LIBRARY_PATH
ENV LD_LIBRARY_PATH=${LIBTORCH}/lib:$LD_LIBRARY_PATH:/usr/local/cuda/compat

# Labels
LABEL Author="Dominik Stanojevic"
Expand Down