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Update Dependencies and Fix Field Aliases#16

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JeanMainguy merged 2 commits intomainfrom
update_deps
Feb 5, 2026
Merged

Update Dependencies and Fix Field Aliases#16
JeanMainguy merged 2 commits intomainfrom
update_deps

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Updates core dependencies and fixes field alias validation for newer Pydantic versions.

Changes:

  • sqlmodel: 0.0.22 → 0.0.32
  • fastapi: 0.115.8 → 0.128.0
  • Added model_config = {"populate_by_name": True} to GenomeInPangenomeMetric

Fix: Newer Pydantic/SQLModel versions require explicit config to accept field aliases when parsing TSV files with capitalized headers.

@JeanMainguy JeanMainguy merged commit 28384ad into main Feb 5, 2026
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@JeanMainguy JeanMainguy deleted the update_deps branch February 5, 2026 14:54
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