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Add link to Mike Love's new book

Status: Open.

#53 In hbctraining/DGE_workshop_salmon;

· marypiper opened on Feb 4, 2020

do we set lfcThreshold in results or lfcShrink or both?

enhancementNew feature or requestNew feature or request

Status: Open.

#49 In hbctraining/DGE_workshop_salmon;

· mistrm82 opened on Dec 11, 2019

PCA link not working

bugSomething isn't workingSomething isn't working

Status: Open.

#47 In hbctraining/DGE_workshop_salmon;

· jihe-liu opened on Dec 10, 2019

Reduce GO and add table of databases

enhancementNew feature or requestNew feature or request

Status: Open.

#43 In hbctraining/DGE_workshop_salmon;

· rkhetani opened on Oct 23, 2019

make this a 1.5 day workshop?

enhancementNew feature or requestNew feature or request

Status: Open.

#42 In hbctraining/DGE_workshop_salmon;

· mistrm82 opened on Oct 23, 2019

coef vs contrast?

bugSomething isn't workingSomething isn't working

Status: Open.

#41 In hbctraining/DGE_workshop_salmon;

· mistrm82 opened on Oct 23, 2019

Change to log2FC shrinkage to apeglm following advice in Mike

bugSomething isn't workingSomething isn't working

Status: Open.

#33 In hbctraining/DGE_workshop_salmon;

· marypiper opened on Oct 21, 2019

Update workflow image with log2FC shrinkage after DE testing

bugSomething isn't workingSomething isn't working

Status: Open.

#32 In hbctraining/DGE_workshop_salmon;

· marypiper opened on Oct 21, 2019

Arguments and functions each on own line and comment all code chunks

enhancementNew feature or requestNew feature or request

Status: Open.

#11 In hbctraining/DGE_workshop_salmon;

· marypiper opened on Aug 6, 2019

Shorten GO part of functional analysis and some of the code (MP)

bugSomething isn't workingSomething isn't working

Status: Open.

#9 In hbctraining/DGE_workshop_salmon;

· marypiper opened on Aug 6, 2019

change sleuth to mike's new package ?

enhancementNew feature or requestNew feature or request

Status: Open.

#3 In hbctraining/DGE_workshop_salmon;

· mistrm82 opened on Jan 29, 2019