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Master thesis repository. CCREx is a (unpublished) tool to predict hendecad coiled-coil domains.

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Description

For anyone wondering: This is the repo for my master thesis. I wanted to make it a pip-installable package, but the time was limited and I had to focus on the written thesis and therefore never published it.

CCREx is a module for predicting hendecad coiled-coil domains on protein sequences utilizing regular expressions and CNN models.

Currently it requires python=3.9

Installation

You can install the module using pip:

Won't happen :(

Theoretical Usage

ccrex -i path/to/fasta [-o /output/directory/ ] [-p/--plot True/False]

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Master thesis repository. CCREx is a (unpublished) tool to predict hendecad coiled-coil domains.

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