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@comprna

Computational RNA Biology group

Computational RNA Biology group

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  1. riser riser Public

    Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing

    Python 15 5

  2. CHEUI CHEUI Public

    Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

    C++ 42 3

  3. R2Dtool R2Dtool Public

    Analyse RNA feature distributions.

    Jupyter Notebook 18 4

  4. RATTLE RATTLE Public

    Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

    C++ 59 10

  5. SUPPA SUPPA Public

    SUPPA: Fast quantification of splicing and differential splicing

    Python 290 63

  6. SWARM SWARM Public

    Single-molecule Workflow for Analysing RNA Modifications

    C++ 7 1

Repositories

Showing 10 of 34 repositories
  • modkitopt Public

    Systematic modkit parameter optimisation for accurate nanopore-based RNA modification calling

    comprna/modkitopt’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Dec 23, 2025
  • SUPPA Public

    SUPPA: Fast quantification of splicing and differential splicing

    comprna/SUPPA’s past year of commit activity
    Python 290 MIT 63 52 1 Updated Nov 6, 2025
  • SWARM Public

    Single-molecule Workflow for Analysing RNA Modifications

    comprna/SWARM’s past year of commit activity
    C++ 7 1 1 0 Updated Oct 30, 2025
  • riser Public

    Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing

    comprna/riser’s past year of commit activity
    Python 15 GPL-3.0 5 1 1 Updated Aug 27, 2025
  • dFORCE Public
    comprna/dFORCE’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 17, 2025
  • R2Dtool Public

    Analyse RNA feature distributions.

    comprna/R2Dtool’s past year of commit activity
    Jupyter Notebook 18 MIT 4 3 0 Updated Dec 16, 2024
  • CHEUI Public

    Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

    comprna/CHEUI’s past year of commit activity
    C++ 42 3 3 0 Updated Jul 19, 2024
  • comprna/SVM-BPfinder-3M’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jul 2, 2024
  • SVM-BPfinder Public
    comprna/SVM-BPfinder’s past year of commit activity
    Python 1 GPL-3.0 1 0 0 Updated Jul 2, 2024
  • RATTLE Public

    Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

    comprna/RATTLE’s past year of commit activity
    C++ 59 GPL-3.0 10 26 0 Updated Feb 15, 2024