Fixed all NANs when genes with all zeros. #11#12
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zqfang wants to merge 3 commits intobrentp:masterfrom
Open
Fixed all NANs when genes with all zeros. #11#12zqfang wants to merge 3 commits intobrentp:masterfrom
zqfang wants to merge 3 commits intobrentp:masterfrom
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I think you'd need something like: but since I haven't been looking at/using this code for some time, I'd require a test before merging this. |
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How does the original script handle constant-valued genes? I don't think it's a good practice to remove them within the function. |
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I have the same issue that " DataFrame contains rows which are entirely zero the result returned by combat() will contain all NaNs".
May be it's a good choice to drop these entirely zeros, because all zeros could no be corrected further.
Hope this is usefull