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12 changes: 6 additions & 6 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -20,16 +20,16 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht
1. Clone this repository and `cd` into it.

```bash
$git clone https://github.com/bigict/tcr_pmhc.git
$cd tcr_pmhc
$git submodule update --init --remote
git clone https://github.com/bigict/tcr_pmhc.git
cd tcr_pmhc
git submodule update --init --remote
```

2. Create conda an environment and activate it.

```bash
$conda create -n tcr python=3.11
$conda activate tcr
conda create -n tcr python=3.11
conda activate tcr
```

You need to install the [ProFOLD2](https://github.com/bigict/ProFOLD2) dependencies
Expand Down Expand Up @@ -59,7 +59,7 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht

You can run
```bash
$predict.sh --help
predict.sh --help
```
for further help.

Expand Down