Fix preprocessing export and filtering logic #2

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baudrly merged 1 commit into main from codex/find-and-fix-important-bug

Oct 19, 2025

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baudrly commented Oct 19, 2025

Summary

import pandas and correct preprocessing filters to drop sequences containing ambiguous residues
export filtered labels and DNA sequences using pandas to_csv with explicit output paths

Testing

⚠️ python - <<'PY' from src.clop.data_utils.preprocessing import preprocess_inputs print('Loaded preprocess_inputs:', callable(preprocess_inputs)) PY (fails: ModuleNotFoundError: No module named 'numpy')

https://chatgpt.com/codex/tasks/task_b_68f54b67cf188326b67a65f9e70f7ba5


          Fix preprocessing export and filtering logic

26a8634

baudrly added the codex label

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ChatGPT Codex Connector

baudrly merged commit 4fa669b into main

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