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Swimmer in pause. Being data/academic scientist as I can.
🏊‍♀️
Swimmer in pause. Being data/academic scientist as I can.

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  1. predprin predprin Public

    Scientific workflow to predict protein-protein interactions based in a combined analysis of multiple protein characteristics.

    Python 2

  2. screendop screendop Public

    Pipeline that performs a screening of disease outcome prediction evaluations following two strategy options: graph kernel based combining PPI + gene expression, and the other based on GSEA enriched…

    Python

  3. caliscoma_pipeline caliscoma_pipeline Public

    Pipeline for drug ranking based on computed pathway scores of disease and healthy samples

    Python 2

  4. ner-fair-workflow ner-fair-workflow Public

    Nextflow workflow to perform named entity recognition experiments handling since the dataset preparation step, the training by finetunning large language models, test, prediction and metadata enric…

    Python

  5. pico_augmentation_workflow pico_augmentation_workflow Public

    Nextflow workflow to perform automatic dataset augmention of a specific set of named entities named PICO (standing for participants, intervention, control and outcomes), gathering and cross-referen…

    Python

  6. paprec_nx_workflow paprec_nx_workflow Public

    Python