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EDA Gene Graphs#146

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eda-gene-graph-spec
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EDA Gene Graphs#146
jbrestel wants to merge 1 commit intomasterfrom
eda-gene-graph-spec

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@jbrestel jbrestel commented Feb 6, 2026

Add displaySpecVariableId and displayMode fields to EdaPhenotypeGraphs and EdaCellularLocalizationGraphs queries. This enables:

  • Dataset-agnostic gene/item identification (no hardcoded variable IDs)
  • Support for both 'highlight' (show all, highlight some) and 'subset' (show only selected) display modes
  • Backward compatibility via NVL defaulting to 'highlight' mode

The displaySpecVariableId should contain the EDA variable ID for the gene/item identifier (e.g., 'VAR_bdc8e679'). The displayMode can be 'highlight' or 'subset', with NULL values defaulting to 'highlight'.

Add displaySpecVariableId and displayMode fields to EdaPhenotypeGraphs
and EdaCellularLocalizationGraphs queries. This enables:
- Dataset-agnostic gene/item identification (no hardcoded variable IDs)
- Support for both 'highlight' (show all, highlight some) and 'subset'
  (show only selected) display modes
- Backward compatibility via NVL defaulting to 'highlight' mode

The displaySpecVariableId should contain the EDA variable ID for the
gene/item identifier (e.g., 'VAR_bdc8e679'). The displayMode can be
'highlight' or 'subset', with NULL values defaulting to 'highlight'.

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
@jbrestel
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jbrestel commented Feb 6, 2026

This is a WIP. Still need to update the Database table (tuning table) which stores the variable ids and graph specs

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