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Fixing Neo4j import issue with sources property being a dict#374

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hyi wants to merge 15 commits intomasterfrom
neo4j-sources-issue
Open

Fixing Neo4j import issue with sources property being a dict#374
hyi wants to merge 15 commits intomasterfrom
neo4j-sources-issue

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@hyi hyi commented Feb 8, 2026

@EvanDietzMorris This PR should fix the Neo4j import issue with sources property being a dict since I have successfully created a neo4j dump for the translator kg with this fix. It also fixes the issue with some unexpected formatting issues in the produced edges.jsonl file with publication property, e.g., \n and \t included in the PMID values plus multiple spaces between PMID: and the PubMed ID numbers, which will be better to be cleaned up in the upstream data ingest component.

@hyi hyi requested a review from EvanDietzMorris February 8, 2026 18:25
@github-actions github-actions bot added the Biological Context QC Require validation of biological context to ensure accuracy and consistency label Feb 8, 2026
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