From 4c9e1bb444208379a5cabf065039eafb515571ad Mon Sep 17 00:00:00 2001
From: "penify-dev[bot]" <146478655+penify-dev[bot]@users.noreply.github.com>
Date: Thu, 15 May 2025 08:09:20 +0000
Subject: [PATCH] Add architecture documentation

---
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+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
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+<table cellspacing="0" cellpadding="0">
+ <tbody>
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+  <td id="projectalign" style="padding-left: 0.5em;">
+   <div id="projectname">penify-cli
+   </div>
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+<!-- end header part --><!-- Generated by Doxygen 1.9.4 -->
+<script type="text/javascript">
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+/* @license-end */
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+<script type="text/javascript" src="menudata.js"></script>
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  $(document).ready(function() { init_search(); });
+});
+/* @license-end */
+</script>
+<div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
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+      <div id="nav-sync" class="sync"></div>
+    </div>
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+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(document).ready(function(){initNavTree('classpenify__hook_1_1api__client_1_1APIClient.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
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+
+<div class="header">
+  <div class="headertitle"><div class="title">penify_hook.api_client.APIClient Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ad9cb741a8baf2d13f845e25a36311086">__init__</a>(self, api_url, str api_token=None, str bearer_token=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a130cf688ed35dc0e8cbd8320b6b2d872">api_url</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a5bb502603717946ad710b49ad9d95237">AUTH_TOKEN</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a7ff74798e7d428b4e2f20095287eb2ce">generate_commit_summary</a>(self, git_diff, str instruction=&quot;&quot;, repo_details=None, dict jira_context=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ac0ada470b897935f9fb372cd0e7e51e3">generate_commit_summary_with_llm</a>(self, diff, message, bool generate_description, repo_details, LLMClient llm_client, jira_context=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ad15b790608e703c8c122aa2ead7dfa99">get_api_key</a>(self)</td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ac5aad61508c2cafdf6e88e6c7d6c82b3">send_file_for_docstring_generation</a>(self, file_name, content, line_numbers, repo_details=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">penify_hook.api_client.APIClient</a></td><td class="entry"></td></tr>
+</table></div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
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diff --git a/docs/html/classpenify__hook_1_1api__client_1_1APIClient.html b/docs/html/classpenify__hook_1_1api__client_1_1APIClient.html
new file mode 100644
index 0000000..960eec6
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+<meta property="og:description" content="penify-cli - Custom CSS theme for html-documentation with lots of customization parameters." />
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+<title>penify-cli: penify_hook.api_client.APIClient Class Reference</title>
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="classpenify__hook_1_1api__client_1_1APIClient-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.api_client.APIClient Class Reference</div></div>
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+<tr class="separator:ac0ada470b897935f9fb372cd0e7e51e3"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ad15b790608e703c8c122aa2ead7dfa99"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a130cf688ed35dc0e8cbd8320b6b2d872"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5bb502603717946ad710b49ad9d95237"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a5bb502603717946ad710b49ad9d95237">AUTH_TOKEN</a></td></tr>
+<tr class="separator:a5bb502603717946ad710b49ad9d95237"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a7d7e2cf42c54eb4f25adee96a09ee7b0"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a7d7e2cf42c54eb4f25adee96a09ee7b0">BEARER_TOKEN</a></td></tr>
+<tr class="separator:a7d7e2cf42c54eb4f25adee96a09ee7b0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="ad9cb741a8baf2d13f845e25a36311086" name="ad9cb741a8baf2d13f845e25a36311086"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad9cb741a8baf2d13f845e25a36311086">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.api_client.APIClient.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_url</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>api_token</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>bearer_token</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a7ff74798e7d428b4e2f20095287eb2ce" name="a7ff74798e7d428b4e2f20095287eb2ce"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7ff74798e7d428b4e2f20095287eb2ce">&#9670;&nbsp;</a></span>generate_commit_summary()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.api_client.APIClient.generate_commit_summary </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>git_diff</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>instruction</em> = <code>&quot;&quot;</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>repo_details</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">dict &#160;</td>
+          <td class="paramname"><em>jira_context</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generates a commit summary by sending a POST request to the API endpoint.
+
+This function constructs a payload containing the git diff and any additional
+instructions provided. It then sends this payload to a specified API endpoint
+to generate a summary of the commit. If the request is successful, it returns
+the response from the API; otherwise, it returns None. The function also
+handles optional repository details and JIRA context if they are provided.
+
+Args:
+    git_diff (str): The git diff of the commit.
+    instruction (str): Additional instruction for the commit. Defaults to "".
+    repo_details (dict): Details of the git repository. Defaults to None.
+    jira_context (dict): JIRA issue details to enhance the commit summary. Defaults to None.
+
+Returns:
+    dict: The response from the API if the request is successful, None otherwise.
+</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.svg" width="646" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ac0ada470b897935f9fb372cd0e7e51e3" name="ac0ada470b897935f9fb372cd0e7e51e3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac0ada470b897935f9fb372cd0e7e51e3">&#9670;&nbsp;</a></span>generate_commit_summary_with_llm()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.api_client.APIClient.generate_commit_summary_with_llm </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>diff</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool&#160;</td>
+          <td class="paramname"><em>generate_description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>repo_details</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html">LLMClient</a>&#160;</td>
+          <td class="paramname"><em>llm_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>jira_context</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generates a commit summary using a local LLM client; falls back to API on
+error.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1api__client_1_1APIClient_ac0ada470b897935f9fb372cd0e7e51e3_cgraph.svg" width="100%" height="388"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ad15b790608e703c8c122aa2ead7dfa99" name="ad15b790608e703c8c122aa2ead7dfa99"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad15b790608e703c8c122aa2ead7dfa99">&#9670;&nbsp;</a></span>get_api_key()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.api_client.APIClient.get_api_key </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Fetch an API key from a specified URL using a Bearer token.</pre> 
+</div>
+</div>
+<a id="a5d2b4a26b24352d951ea79ecc4ff3402" name="a5d2b4a26b24352d951ea79ecc4ff3402"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5d2b4a26b24352d951ea79ecc4ff3402">&#9670;&nbsp;</a></span>get_supported_file_types()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> list[str] penify_hook.api_client.APIClient.get_supported_file_types </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieve supported file types from the API or return a default list.</pre> 
+</div>
+</div>
+<a id="ac5aad61508c2cafdf6e88e6c7d6c82b3" name="ac5aad61508c2cafdf6e88e6c7d6c82b3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac5aad61508c2cafdf6e88e6c7d6c82b3">&#9670;&nbsp;</a></span>send_file_for_docstring_generation()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.api_client.APIClient.send_file_for_docstring_generation </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_name</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>content</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>line_numbers</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>repo_details</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Send file content and modified lines to the API and return modified content.</pre> 
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a130cf688ed35dc0e8cbd8320b6b2d872" name="a130cf688ed35dc0e8cbd8320b6b2d872"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a130cf688ed35dc0e8cbd8320b6b2d872">&#9670;&nbsp;</a></span>api_url</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.api_client.APIClient.api_url</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a5bb502603717946ad710b49ad9d95237" name="a5bb502603717946ad710b49ad9d95237"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5bb502603717946ad710b49ad9d95237">&#9670;&nbsp;</a></span>AUTH_TOKEN</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.api_client.APIClient.AUTH_TOKEN</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a7d7e2cf42c54eb4f25adee96a09ee7b0" name="a7d7e2cf42c54eb4f25adee96a09ee7b0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a7d7e2cf42c54eb4f25adee96a09ee7b0">&#9670;&nbsp;</a></span>BEARER_TOKEN</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.api_client.APIClient.BEARER_TOKEN</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="api__client_8py.html">api_client.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1api__client.html">api_client</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classpenify__hook_1_1api__client_1_1APIClient.js b/docs/html/classpenify__hook_1_1api__client_1_1APIClient.js
new file mode 100644
index 0000000..be81d43
--- /dev/null
+++ b/docs/html/classpenify__hook_1_1api__client_1_1APIClient.js
@@ -0,0 +1,12 @@
+var classpenify__hook_1_1api__client_1_1APIClient =
+[
+    [ "__init__", "classpenify__hook_1_1api__client_1_1APIClient.html#ad9cb741a8baf2d13f845e25a36311086", null ],
+    [ "generate_commit_summary", "classpenify__hook_1_1api__client_1_1APIClient.html#a7ff74798e7d428b4e2f20095287eb2ce", null ],
+    [ "generate_commit_summary_with_llm", "classpenify__hook_1_1api__client_1_1APIClient.html#ac0ada470b897935f9fb372cd0e7e51e3", null ],
+    [ "get_api_key", "classpenify__hook_1_1api__client_1_1APIClient.html#ad15b790608e703c8c122aa2ead7dfa99", null ],
+    [ "get_supported_file_types", "classpenify__hook_1_1api__client_1_1APIClient.html#a5d2b4a26b24352d951ea79ecc4ff3402", null ],
+    [ "send_file_for_docstring_generation", "classpenify__hook_1_1api__client_1_1APIClient.html#ac5aad61508c2cafdf6e88e6c7d6c82b3", null ],
+    [ "api_url", "classpenify__hook_1_1api__client_1_1APIClient.html#a130cf688ed35dc0e8cbd8320b6b2d872", null ],
+    [ "AUTH_TOKEN", "classpenify__hook_1_1api__client_1_1APIClient.html#a5bb502603717946ad710b49ad9d95237", null ],
+    [ "BEARER_TOKEN", "classpenify__hook_1_1api__client_1_1APIClient.html#a7d7e2cf42c54eb4f25adee96a09ee7b0", null ]
+];
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diff --git a/docs/html/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html b/docs/html/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html
new file mode 100644
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
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+<a href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer-members.html">List of all members</a>  </div>
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+<div id="doc-content">
+<!-- window showing the filter options -->
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+<div class="header">
+  <div class="headertitle"><div class="title">penify_hook.commit_analyzer.CommitDocGenHook Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#af127d86729e226d74dbeb095b008db3e">__init__</a>(self, str repo_path, APIClient api_client, llm_client=None, jira_client=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ac999c5cbc852a7ec3b412ccb43c274ca">_amend_commit</a>(self)</td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"><span class="mlabel">private</span></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a8496194276441fa2eb2fa014eaab9a37">get_summary</a>(self, str instruction, bool generate_description)</td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ad93360e31f2ec58a0d7c9f08b219028a">llm_client</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#adda13cc121d96342476ccf72b63a007f">process_jira_integration</a>(self, str title, str description, str msg)</td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a6370a03f7ed9175ef6f81e931a105ea9">run</a>(self, Optional[str] msg, bool edit_commit_message, bool generate_description)</td><td class="entry"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">penify_hook.commit_analyzer.CommitDocGenHook</a></td><td class="entry"></td></tr>
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diff --git a/docs/html/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html b/docs/html/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html
new file mode 100644
index 0000000..415cd76
--- /dev/null
+++ b/docs/html/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html
@@ -0,0 +1,486 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
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+<meta name="viewport" content="width=device-width, initial-scale=1"/>
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+<meta property="og:title" content="penify-cli " />
+<meta property="og:image" content="https://repository-images.githubusercontent.com/348492097/4f16df80-88fb-11eb-9d31-4015ff22c452" />
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+<meta name="twitter:description" content="Custom CSS theme for doxygen html-documentation with lots of customization parameters." />
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+<title>penify-cli: penify_hook.commit_analyzer.CommitDocGenHook Class Reference</title>
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+  <td id="projectalign" style="padding-left: 0.5em;">
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+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="#pri-methods">Private Member Functions</a> &#124;
+<a href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commit_analyzer.CommitDocGenHook Class Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="dynheader">
+Inheritance diagram for penify_hook.commit_analyzer.CommitDocGenHook:</div>
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+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__inherit__graph.svg" width="236" height="390"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Collaboration diagram for penify_hook.commit_analyzer.CommitDocGenHook:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__coll__graph.svg" width="236" height="390"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:af127d86729e226d74dbeb095b008db3e"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#af127d86729e226d74dbeb095b008db3e">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a957e81a1ab561f6cecfbe999e7b85499">repo_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>, <a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ad93360e31f2ec58a0d7c9f08b219028a">llm_client</a>=None, jira_client=None)</td></tr>
+<tr class="separator:af127d86729e226d74dbeb095b008db3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8496194276441fa2eb2fa014eaab9a37"><td class="memItemLeft" align="right" valign="top">dict&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a8496194276441fa2eb2fa014eaab9a37">get_summary</a> (self, str instruction, bool generate_description)</td></tr>
+<tr class="separator:a8496194276441fa2eb2fa014eaab9a37"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6370a03f7ed9175ef6f81e931a105ea9"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a6370a03f7ed9175ef6f81e931a105ea9">run</a> (self, Optional[str] msg, bool edit_commit_message, bool generate_description)</td></tr>
+<tr class="separator:a6370a03f7ed9175ef6f81e931a105ea9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adda13cc121d96342476ccf72b63a007f"><td class="memItemLeft" align="right" valign="top">tuple&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#adda13cc121d96342476ccf72b63a007f">process_jira_integration</a> (self, str title, str description, str msg)</td></tr>
+<tr class="separator:adda13cc121d96342476ccf72b63a007f"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab1296a3d1e9070d891801876b66f7344"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>)</td></tr>
+<tr class="separator:ab1296a3d1e9070d891801876b66f7344"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:ad93360e31f2ec58a0d7c9f08b219028a"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ad93360e31f2ec58a0d7c9f08b219028a">llm_client</a></td></tr>
+<tr class="separator:ad93360e31f2ec58a0d7c9f08b219028a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td colspan="2" onclick="javascript:toggleInherit('pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer')"><img src="closed.png" alt="-"/>&#160;Public Attributes inherited from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html">penify_hook.base_analyzer.BaseAnalyzer</a></td></tr>
+<tr class="memitem:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a></td></tr>
+<tr class="separator:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a957e81a1ab561f6cecfbe999e7b85499 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a957e81a1ab561f6cecfbe999e7b85499">repo_path</a></td></tr>
+<tr class="separator:a957e81a1ab561f6cecfbe999e7b85499 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3a9ddfa1dfba81fe21214fe486389369 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a3a9ddfa1dfba81fe21214fe486389369">repo</a></td></tr>
+<tr class="separator:a3a9ddfa1dfba81fe21214fe486389369 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9cca3465b0cc00d78324b0a9eac1d7f5 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a9cca3465b0cc00d78324b0a9eac1d7f5">repo_details</a></td></tr>
+<tr class="separator:a9cca3465b0cc00d78324b0a9eac1d7f5 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab702c0c3ba81d159d7c3bcd7ea2abba4 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab702c0c3ba81d159d7c3bcd7ea2abba4">relative_file_path</a></td></tr>
+<tr class="separator:ab702c0c3ba81d159d7c3bcd7ea2abba4 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a></td></tr>
+<tr class="separator:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0cac0310ec635aa64a34857cf30ce1eb inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a0cac0310ec635aa64a34857cf30ce1eb">supported_file_types</a></td></tr>
+<tr class="separator:a0cac0310ec635aa64a34857cf30ce1eb inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-methods" name="pri-methods"></a>
+Private Member Functions</h2></td></tr>
+<tr class="memitem:ac999c5cbc852a7ec3b412ccb43c274ca"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ac999c5cbc852a7ec3b412ccb43c274ca">_amend_commit</a> (self)</td></tr>
+<tr class="separator:ac999c5cbc852a7ec3b412ccb43c274ca"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="af127d86729e226d74dbeb095b008db3e" name="af127d86729e226d74dbeb095b008db3e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af127d86729e226d74dbeb095b008db3e">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commit_analyzer.CommitDocGenHook.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>repo_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a>&#160;</td>
+          <td class="paramname"><em>api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>llm_client</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>jira_client</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reimplemented from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</a>.</p>
+<div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_cgraph.svg" width="240" height="91"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_icgraph.svg" width="240" height="91"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="ac999c5cbc852a7ec3b412ccb43c274ca" name="ac999c5cbc852a7ec3b412ccb43c274ca"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac999c5cbc852a7ec3b412ccb43c274ca">&#9670;&nbsp;</a></span>_amend_commit()</h2>
+
+<div class="memitem">
+<div class="memproto">
+<table class="mlabels">
+  <tr>
+  <td class="mlabels-left">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commit_analyzer.CommitDocGenHook._amend_commit </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+  </td>
+  <td class="mlabels-right">
+<span class="mlabels"><span class="mlabel">private</span></span>  </td>
+  </tr>
+</table>
+</div><div class="memdoc">
+<pre class="fragment">Amends the last commit message in the repository.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_ac999c5cbc852a7ec3b412ccb43c274ca_icgraph.svg" width="539" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a8496194276441fa2eb2fa014eaab9a37" name="a8496194276441fa2eb2fa014eaab9a37"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8496194276441fa2eb2fa014eaab9a37">&#9670;&nbsp;</a></span>get_summary()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> dict penify_hook.commit_analyzer.CommitDocGenHook.get_summary </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>instruction</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool&#160;</td>
+          <td class="paramname"><em>generate_description</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generate a summary for the commit based on the staged changes.
+
+This function retrieves the differences of the staged changes in the repository
+and generates a commit summary using the provided instruction. If there are no
+changes staged for commit, an exception is raised. If a JIRA client is
+connected, it will attempt to extract issue keys from the current branch and
+use them to fetch context. The summary can be generated either with a Language
+Model (LLM) client or through the API client.
+
+Args:
+    instruction (str): A string containing instructions for generating the commit summary.
+    generate_description (bool): Whether to include detailed descriptions in the summary.
+
+Raises:
+    ValueError: If there are no changes staged for commit.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_cgraph.svg" width="100%" height="300"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_icgraph.svg" width="560" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="adda13cc121d96342476ccf72b63a007f" name="adda13cc121d96342476ccf72b63a007f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adda13cc121d96342476ccf72b63a007f">&#9670;&nbsp;</a></span>process_jira_integration()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> tuple penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>title</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>msg</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Process JIRA integration by extracting issue keys from commit message
+components and branch name.
+
+This function looks for JIRA issue keys in the provided commit title,
+description, original user message, and the active branch name. It uses these
+keys to update the commit message with JIRA information and adds comments to
+the corresponding JIRA issues. If no keys are found, it logs a warning.
+
+Args:
+    title (str): The generated commit title.
+    description (str): The generated commit description.
+    msg (str): The original user message that might contain JIRA references.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with included JIRA
+        information.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_cgraph.svg" width="100%" height="378"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_icgraph.svg" width="588" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a6370a03f7ed9175ef6f81e931a105ea9" name="a6370a03f7ed9175ef6f81e931a105ea9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6370a03f7ed9175ef6f81e931a105ea9">&#9670;&nbsp;</a></span>run()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commit_analyzer.CommitDocGenHook.run </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">Optional[str]&#160;</td>
+          <td class="paramname"><em>msg</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool&#160;</td>
+          <td class="paramname"><em>edit_commit_message</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool&#160;</td>
+          <td class="paramname"><em>generate_description</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Run the post-commit hook.
+
+This method processes the modified files from the last commit, stages them, and
+creates an auto-commit with an optional message. It also handles JIRA
+integration if available. If there is an error generating the commit summary,
+an exception is raised.
+
+Args:
+    msg (Optional[str]): An optional message to include in the commit.
+    edit_commit_message (bool): A flag indicating whether to open the git commit
+        edit terminal after committing.
+    generate_description (bool): A flag indicating whether to include a description
+        in the commit message.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
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+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="ad93360e31f2ec58a0d7c9f08b219028a" name="ad93360e31f2ec58a0d7c9f08b219028a"></a>
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+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="commit__analyzer_8py.html">commit_analyzer.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1commit__analyzer.html">commit_analyzer</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html">CommitDocGenHook</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
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\ No newline at end of file
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+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html">penify_hook.file_analyzer.FileAnalyzerGenHook</a>, including all inherited members.</p>
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+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a9b03b88a9ce1b9af945279375048dc32">file_path</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html">penify_hook.file_analyzer.FileAnalyzerGenHook</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a6ab39391dfb7686f2a2d21a702dd3073">print_processing</a>(self, file_path)</td><td class="entry"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html">penify_hook.file_analyzer.FileAnalyzerGenHook</a></td><td class="entry"></td></tr>
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+<a href="#pub-methods">Public Member Functions</a> &#124;
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+<a href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook-members.html">List of all members</a>  </div>
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+<tr class="memitem:a190c473090b2a07e7cb43073a3211c4b"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a190c473090b2a07e7cb43073a3211c4b">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a9b03b88a9ce1b9af945279375048dc32">file_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>)</td></tr>
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+<tr class="separator:ab1296a3d1e9070d891801876b66f7344"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a9b03b88a9ce1b9af945279375048dc32"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a9b03b88a9ce1b9af945279375048dc32">file_path</a></td></tr>
+<tr class="separator:a9b03b88a9ce1b9af945279375048dc32"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td colspan="2" onclick="javascript:toggleInherit('pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer')"><img src="closed.png" alt="-"/>&#160;Public Attributes inherited from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html">penify_hook.base_analyzer.BaseAnalyzer</a></td></tr>
+<tr class="memitem:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a></td></tr>
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+<tr class="separator:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a190c473090b2a07e7cb43073a3211c4b" name="a190c473090b2a07e7cb43073a3211c4b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a190c473090b2a07e7cb43073a3211c4b">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.file_analyzer.FileAnalyzerGenHook.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>file_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a>&#160;</td>
+          <td class="paramname"><em>api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reimplemented from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a6ab39391dfb7686f2a2d21a702dd3073" name="a6ab39391dfb7686f2a2d21a702dd3073"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6ab39391dfb7686f2a2d21a702dd3073">&#9670;&nbsp;</a></span>print_processing()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_path</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Prints a message indicating that a file is being processed.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a6ab39391dfb7686f2a2d21a702dd3073_cgraph.svg" width="455" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a2cc6c22ef588fccf3eed9bbc57fb6d6e" name="a2cc6c22ef588fccf3eed9bbc57fb6d6e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2cc6c22ef588fccf3eed9bbc57fb6d6e">&#9670;&nbsp;</a></span>process_file()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.file_analyzer.FileAnalyzerGenHook.process_file </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>pbar</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>new_param</em> = <code>&quot;&quot;</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Processes a file by validating its extension, reading content,
+generating documentation, and writing changes back to the file.  The function
+performs several stages of processing: 1. Validates the file's extension to
+ensure it is supported. 2. Reads the content of the file. 3. Sends the file
+content for documentation generation. 4. Writes the generated documentation
+back to the file if there are changes.
+
+Args:
+    file_path (str): The path of the file to be processed.
+    pbar (tqdm.tqdm): A progress bar object to update the status of processing stages.
+    new_param (str?): An additional parameter for future use. Defaults to an empty string.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_cgraph.svg" width="100%" height="388"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_icgraph.svg" width="492" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a4f4dffbc432fac3e259d957dd1e187f1" name="a4f4dffbc432fac3e259d957dd1e187f1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4f4dffbc432fac3e259d957dd1e187f1">&#9670;&nbsp;</a></span>run()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.file_analyzer.FileAnalyzerGenHook.run </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Runs the documentation process with a progress bar.
+
+This method orchestrates the documentation process by creating a progress bar,
+processing the file, and handling exceptions to ensure the progress bar
+completes properly. It updates the progress bar through various stages and
+provides feedback based on the result of the file processing.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a4f4dffbc432fac3e259d957dd1e187f1_cgraph.svg" width="100%" height="584"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a9b03b88a9ce1b9af945279375048dc32" name="a9b03b88a9ce1b9af945279375048dc32"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9b03b88a9ce1b9af945279375048dc32">&#9670;&nbsp;</a></span>file_path</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="file__analyzer_8py.html">file_analyzer.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1file__analyzer.html">file_analyzer</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html">FileAnalyzerGenHook</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
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new file mode 100644
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--- /dev/null
+++ b/docs/html/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.js
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+var classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook =
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+    [ "print_processing", "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a6ab39391dfb7686f2a2d21a702dd3073", null ],
+    [ "process_file", "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a2cc6c22ef588fccf3eed9bbc57fb6d6e", null ],
+    [ "run", "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a4f4dffbc432fac3e259d957dd1e187f1", null ],
+    [ "file_path", "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a9b03b88a9ce1b9af945279375048dc32", null ]
+];
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+        name="MSearchResults" id="MSearchResults">
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+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="#pub-attribs">Public Attributes</a> &#124;
+<a href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.folder_analyzer.FolderAnalyzerGenHook Class Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="dynheader">
+Inheritance diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__inherit__graph.svg" width="256" height="360"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Collaboration diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__coll__graph.svg" width="256" height="360"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a1bb0358140931d82c7616f12efe31821"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a1bb0358140931d82c7616f12efe31821">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a53f73d69cc0f00763ee4830e4f0f7393">dir_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>)</td></tr>
+<tr class="separator:a1bb0358140931d82c7616f12efe31821"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a70b845318fc7ac3b607daf26378e19ec"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a70b845318fc7ac3b607daf26378e19ec">list_all_files_in_dir</a> (self, str <a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a53f73d69cc0f00763ee4830e4f0f7393">dir_path</a>)</td></tr>
+<tr class="separator:a70b845318fc7ac3b607daf26378e19ec"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:afd189d1b8c773bf710a899eb21fd76cc"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#afd189d1b8c773bf710a899eb21fd76cc">run</a> (self)</td></tr>
+<tr class="separator:afd189d1b8c773bf710a899eb21fd76cc"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab1296a3d1e9070d891801876b66f7344"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>)</td></tr>
+<tr class="separator:ab1296a3d1e9070d891801876b66f7344"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:a53f73d69cc0f00763ee4830e4f0f7393"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a53f73d69cc0f00763ee4830e4f0f7393">dir_path</a></td></tr>
+<tr class="separator:a53f73d69cc0f00763ee4830e4f0f7393"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="inherit_header pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td colspan="2" onclick="javascript:toggleInherit('pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer')"><img src="closed.png" alt="-"/>&#160;Public Attributes inherited from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html">penify_hook.base_analyzer.BaseAnalyzer</a></td></tr>
+<tr class="memitem:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a></td></tr>
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+<tr class="separator:a3a9ddfa1dfba81fe21214fe486389369 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a9cca3465b0cc00d78324b0a9eac1d7f5 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:ab702c0c3ba81d159d7c3bcd7ea2abba4 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a1bb0358140931d82c7616f12efe31821" name="a1bb0358140931d82c7616f12efe31821"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1bb0358140931d82c7616f12efe31821">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>dir_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a>&#160;</td>
+          <td class="paramname"><em>api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reimplemented from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</a>.</p>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a70b845318fc7ac3b607daf26378e19ec" name="a70b845318fc7ac3b607daf26378e19ec"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a70b845318fc7ac3b607daf26378e19ec">&#9670;&nbsp;</a></span>list_all_files_in_dir()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>dir_path</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">List all non-hidden files in a directory and its subdirectories.
+
+This function recursively traverses the specified directory and its
+subdirectories, collecting paths of all non-hidden files. It filters out hidden
+directories and files (those starting with a dot) to ensure only visible files
+are returned.
+
+Args:
+    dir_path (str): The path to the directory whose files and subdirectory files need to be listed.
+</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_a70b845318fc7ac3b607daf26378e19ec_icgraph.svg" width="480" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="afd189d1b8c773bf710a899eb21fd76cc" name="afd189d1b8c773bf710a899eb21fd76cc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afd189d1b8c773bf710a899eb21fd76cc">&#9670;&nbsp;</a></span>run()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.folder_analyzer.FolderAnalyzerGenHook.run </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Run the post-commit hook and process files with a progress bar.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_afd189d1b8c773bf710a899eb21fd76cc_cgraph.svg" width="480" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a53f73d69cc0f00763ee4830e4f0f7393" name="a53f73d69cc0f00763ee4830e4f0f7393"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a53f73d69cc0f00763ee4830e4f0f7393">&#9670;&nbsp;</a></span>dir_path</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="folder__analyzer_8py.html">folder_analyzer.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1folder__analyzer.html">folder_analyzer</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html">FolderAnalyzerGenHook</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.js b/docs/html/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.js
new file mode 100644
index 0000000..5b2a45e
--- /dev/null
+++ b/docs/html/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.js
@@ -0,0 +1,7 @@
+var classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook =
+[
+    [ "__init__", "classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a1bb0358140931d82c7616f12efe31821", null ],
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+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a17549766100e91eb94b5f1a1d34bf481">get_modified_files_in_last_commit</a>(self)</td><td class="entry"><a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html">penify_hook.git_analyzer.GitDocGenHook</a></td><td class="entry"></td></tr>
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new file mode 100644
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+<tr class="separator:a17549766100e91eb94b5f1a1d34bf481"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a974d2f51315ed6a1965a7fd7e2ced0cd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a05313caa22b173ce75638f0db08eeb85"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a05313caa22b173ce75638f0db08eeb85">process_file</a> (self, file_path)</td></tr>
+<tr class="separator:a05313caa22b173ce75638f0db08eeb85"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3beba14e92d717391a74bb70b1fab0ae"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a3beba14e92d717391a74bb70b1fab0ae">run</a> (self)</td></tr>
+<tr class="separator:a3beba14e92d717391a74bb70b1fab0ae"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab1296a3d1e9070d891801876b66f7344"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">__init__</a> (self, str <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a>, <a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a> <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a>)</td></tr>
+<tr class="separator:ab1296a3d1e9070d891801876b66f7344"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="inherited" name="inherited"></a>
+Additional Inherited Members</h2></td></tr>
+<tr class="inherit_header pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td colspan="2" onclick="javascript:toggleInherit('pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer')"><img src="closed.png" alt="-"/>&#160;Public Attributes inherited from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html">penify_hook.base_analyzer.BaseAnalyzer</a></td></tr>
+<tr class="memitem:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#aa67c06dd12b1bafaeaee81c41dcb7e25">folder_path</a></td></tr>
+<tr class="separator:aa67c06dd12b1bafaeaee81c41dcb7e25 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a957e81a1ab561f6cecfbe999e7b85499 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a957e81a1ab561f6cecfbe999e7b85499">repo_path</a></td></tr>
+<tr class="separator:a957e81a1ab561f6cecfbe999e7b85499 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="separator:a3a9ddfa1dfba81fe21214fe486389369 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
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+<tr class="memitem:ab702c0c3ba81d159d7c3bcd7ea2abba4 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab702c0c3ba81d159d7c3bcd7ea2abba4">relative_file_path</a></td></tr>
+<tr class="separator:ab702c0c3ba81d159d7c3bcd7ea2abba4 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a81e9c55709205aaf4ebbe2b41683baf2">api_client</a></td></tr>
+<tr class="separator:a81e9c55709205aaf4ebbe2b41683baf2 inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0cac0310ec635aa64a34857cf30ce1eb inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#a0cac0310ec635aa64a34857cf30ce1eb">supported_file_types</a></td></tr>
+<tr class="separator:a0cac0310ec635aa64a34857cf30ce1eb inherit pub_attribs_classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a92275fddb43dbef6dfdb6c1ed6e96d0c" name="a92275fddb43dbef6dfdb6c1ed6e96d0c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a92275fddb43dbef6dfdb6c1ed6e96d0c">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.git_analyzer.GitDocGenHook.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>repo_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html">APIClient</a>&#160;</td>
+          <td class="paramname"><em>api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+<p>Reimplemented from <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</a>.</p>
+<div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_cgraph.svg" width="199" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_icgraph.svg" width="199" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a17549766100e91eb94b5f1a1d34bf481" name="a17549766100e91eb94b5f1a1d34bf481"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a17549766100e91eb94b5f1a1d34bf481">&#9670;&nbsp;</a></span>get_modified_files_in_last_commit()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Get the list of files modified in the last commit.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a17549766100e91eb94b5f1a1d34bf481_icgraph.svg" width="462" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a974d2f51315ed6a1965a7fd7e2ced0cd" name="a974d2f51315ed6a1965a7fd7e2ced0cd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a974d2f51315ed6a1965a7fd7e2ced0cd">&#9670;&nbsp;</a></span>get_modified_lines()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.git_analyzer.GitDocGenHook.get_modified_lines </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>diff_text</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Extract modified line numbers from a diff text.
+
+This function processes a diff text to identify and extract the line numbers
+that have been modified. It distinguishes between added and deleted lines and
+keeps track of the current line number as it parses through the diff. The
+function handles hunk headers and ensures that any deletions at the end of the
+file are also captured.
+
+Args:
+    diff_text (str): A string containing the diff text to be processed.
+</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a974d2f51315ed6a1965a7fd7e2ced0cd_icgraph.svg" width="100%" height="388"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a05313caa22b173ce75638f0db08eeb85" name="a05313caa22b173ce75638f0db08eeb85"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a05313caa22b173ce75638f0db08eeb85">&#9670;&nbsp;</a></span>process_file()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.git_analyzer.GitDocGenHook.process_file </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_path</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Processes a file by checking its type, reading its content, and sending it to
+an API.
+
+This method constructs the absolute path of the specified file and verifies if
+the file has a valid extension. If the file type is supported, it reads the
+content of the file and retrieves the differences from the last commit in the
+repository. If changes are detected, it sends the file content along with the
+modified lines to an API for further processing. If the API response indicates
+no changes, the original file will not be overwritten.
+
+Args:
+    file_path (str): The relative path to the file to be processed.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_cgraph.svg" width="519" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_icgraph.svg" width="456" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a3beba14e92d717391a74bb70b1fab0ae" name="a3beba14e92d717391a74bb70b1fab0ae"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3beba14e92d717391a74bb70b1fab0ae">&#9670;&nbsp;</a></span>run()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.git_analyzer.GitDocGenHook.run </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Run the post-commit hook.
+
+This method retrieves the list of modified files from the last commit and
+processes each file. It stages any files that have been modified during
+processing and creates an auto-commit if changes were made. A progress bar is
+displayed to indicate the processing status of each file. The method handles
+any exceptions that occur during file processing, printing an error message for
+each file that fails to process. If any modifications are made to the files, an
+auto-commit is created to save those changes.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a3beba14e92d717391a74bb70b1fab0ae_cgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="git__analyzer_8py.html">git_analyzer.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1git__analyzer.html">git_analyzer</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html">GitDocGenHook</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.js b/docs/html/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.js
new file mode 100644
index 0000000..553f118
--- /dev/null
+++ b/docs/html/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.js
@@ -0,0 +1,8 @@
+var classpenify__hook_1_1git__analyzer_1_1GitDocGenHook =
+[
+    [ "__init__", "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a92275fddb43dbef6dfdb6c1ed6e96d0c", null ],
+    [ "get_modified_files_in_last_commit", "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a17549766100e91eb94b5f1a1d34bf481", null ],
+    [ "get_modified_lines", "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a974d2f51315ed6a1965a7fd7e2ced0cd", null ],
+    [ "process_file", "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a05313caa22b173ce75638f0db08eeb85", null ],
+    [ "run", "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a3beba14e92d717391a74bb70b1fab0ae", null ]
+];
\ No newline at end of file
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+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#ad2823ad1d3baaedd38039913c3a97fd7">extract_issue_keys</a>(self, str text)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a093d6456fe053ef7a7862d5d6851910c">extract_issue_keys_from_branch</a>(self, str branch_name)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a49ea1149758f7f5212149d357b13cc23">format_commit_message_with_jira_info</a>(self, str commit_title, str commit_description, List[str] issue_keys=None)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#afb41ce6f13c30b1265d439ddf04bf2cd">get_commit_context_from_issues</a>(self, List[str] issue_keys)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aa967169a4b7970c67c0947b9ac56f746">get_detailed_issue_context</a>(self, str issue_key)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a65f6924819084b7c8d268956a784804a">get_issue_details</a>(self, str issue_key)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a00d0f9ae006313a21576362d26ac5ec8">is_connected</a>(self)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#afc5c90e53b702f9fc27e2ee7d3f991b9">jira_api_token</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aefb3f96c79358cf3a95d96d3747235b6">jira_client</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a3c0cfecff02a75cb7001509a595b8197">jira_url</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#ae56104d5aa7bda7bb26d169c4b46038c">jira_user</a></td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
+  <tr class="even"><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aca8837552d37bfd611de23441a240826">update_issue_status</a>(self, str issue_key, str transition_name)</td><td class="entry"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">penify_hook.jira_client.JiraClient</a></td><td class="entry"></td></tr>
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+<a href="#pub-methods">Public Member Functions</a> &#124;
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+<a href="classpenify__hook_1_1jira__client_1_1JiraClient-members.html">List of all members</a>  </div>
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+<tr class="memitem:afc5c90e53b702f9fc27e2ee7d3f991b9"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#afc5c90e53b702f9fc27e2ee7d3f991b9">jira_api_token</a></td></tr>
+<tr class="separator:afc5c90e53b702f9fc27e2ee7d3f991b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aefb3f96c79358cf3a95d96d3747235b6"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aefb3f96c79358cf3a95d96d3747235b6">jira_client</a></td></tr>
+<tr class="separator:aefb3f96c79358cf3a95d96d3747235b6"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><pre class="fragment">Client for interacting with JIRA API
+</pre> </div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a47efc1ec07389c960f2dfb37ba8c09f5" name="a47efc1ec07389c960f2dfb37ba8c09f5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a47efc1ec07389c960f2dfb37ba8c09f5">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.jira_client.JiraClient.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>jira_url</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>jira_user</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>jira_api_token</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Initialize the JIRA client.
+
+Args:
+    jira_url: Base URL for JIRA instance (e.g., "https://your-domain.atlassian.net")
+    jira_user: JIRA username or email
+    jira_api_token: JIRA API token
+</pre> 
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aa1f374116c64cd5f1492ec7f7e40f9c1" name="aa1f374116c64cd5f1492ec7f7e40f9c1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa1f374116c64cd5f1492ec7f7e40f9c1">&#9670;&nbsp;</a></span>add_comment()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> bool penify_hook.jira_client.JiraClient.add_comment </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>issue_key</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>comment</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Adds a comment to a JIRA issue.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_cgraph.svg" width="411" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_icgraph.svg" width="190" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a70d2c5a6432aa6f238da0ff65d49a760" name="a70d2c5a6432aa6f238da0ff65d49a760"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a70d2c5a6432aa6f238da0ff65d49a760">&#9670;&nbsp;</a></span>enhance_commit_message()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> tuple penify_hook.jira_client.JiraClient.enhance_commit_message </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>title</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">List[str]&#160;</td>
+          <td class="paramname"><em>issue_keys</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Enhance a commit message with business and technical context from JIRA issues.
+
+This function first checks if the list of issue keys is empty or if there is no
+connection. If so, it returns the original title and description without
+modification. It then retrieves context information from the specified JIRA
+issues. If the primary issue is missing, it formats the commit message with
+basic JIRA info.  The function enhances the commit title by prefixing it with
+the primary issue key if not already included. It appends a business context
+section to the description, including details like issue type, status,
+priority, sprint, acceptance criteria, and a condensed issue description. If
+comments are available, they are added as technical notes. Finally, related
+issues are listed.
+
+Args:
+    title (str): Original commit title.
+    description (str): Original commit description.
+    issue_keys (List[str]): List of JIRA issue keys to include in the enhanced commit message.
+
+Returns:
+    tuple: A tuple containing the enhanced commit title and description with added
+        context from JIRA issues.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a70d2c5a6432aa6f238da0ff65d49a760_cgraph.svg" width="100%" height="523"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ad2823ad1d3baaedd38039913c3a97fd7" name="ad2823ad1d3baaedd38039913c3a97fd7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad2823ad1d3baaedd38039913c3a97fd7">&#9670;&nbsp;</a></span>extract_issue_keys()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>text</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Extract unique JIRA issue keys from the given text.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_ad2823ad1d3baaedd38039913c3a97fd7_icgraph.svg" width="100%" height="300"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a093d6456fe053ef7a7862d5d6851910c" name="a093d6456fe053ef7a7862d5d6851910c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a093d6456fe053ef7a7862d5d6851910c">&#9670;&nbsp;</a></span>extract_issue_keys_from_branch()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>branch_name</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Extracts unique JIRA issue keys from a branch name.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_cgraph.svg" width="100%" height="300"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a49ea1149758f7f5212149d357b13cc23" name="a49ea1149758f7f5212149d357b13cc23"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a49ea1149758f7f5212149d357b13cc23">&#9670;&nbsp;</a></span>format_commit_message_with_jira_info()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> tuple penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>commit_title</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>commit_description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">List[str] &#160;</td>
+          <td class="paramname"><em>issue_keys</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format commit message with JIRA issue information.
+
+This function updates the provided commit title and description by
+incorporating JIRA issue keys. If no issue keys are supplied, it extracts them
+from the commit title and description. It then formats the commit title to
+include the first issue key if not already present and appends detailed
+information about each issue to the commit description.
+
+Args:
+    commit_title (str): The original commit title.
+    commit_description (str): The original commit description.
+    issue_keys (List[str]?): A list of JIRA issue keys to include in the commit message. If not
+        provided, issue keys will be extracted from both the title and the description.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with JIRA
+        information included.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_cgraph.svg" width="100%" height="410"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_icgraph.svg" width="443" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="afb41ce6f13c30b1265d439ddf04bf2cd" name="afb41ce6f13c30b1265d439ddf04bf2cd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afb41ce6f13c30b1265d439ddf04bf2cd">&#9670;&nbsp;</a></span>get_commit_context_from_issues()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Dict[str, Any] penify_hook.jira_client.JiraClient.get_commit_context_from_issues </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">List[str]&#160;</td>
+          <td class="paramname"><em>issue_keys</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Gather contextual information from JIRA issues to improve commit messages.
+
+This function processes a list of JIRA issue keys, retrieves detailed context
+for each issue, and aggregates it into a dictionary that can be used to enhance
+commit messages. It first retrieves the primary issue (the first key in the
+list) and then gathers basic details for any related issues. The resulting
+context includes information from both the primary and related issues, along
+with all issue keys.
+
+Args:
+    issue_keys: List of JIRA issue keys to gather information from
+
+Returns:
+    Dict containing business and technical context from the issues
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_cgraph.svg" width="652" height="184"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.svg" width="430" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="aa967169a4b7970c67c0947b9ac56f746" name="aa967169a4b7970c67c0947b9ac56f746"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa967169a4b7970c67c0947b9ac56f746">&#9670;&nbsp;</a></span>get_detailed_issue_context()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Dict[str, Any] penify_hook.jira_client.JiraClient.get_detailed_issue_context </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>issue_key</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieve comprehensive details about a JIRA issue including context for better
+commit messages.
+
+This function fetches detailed information from a specified JIRA issue and
+constructs a dictionary containing various context fields such as the issue
+summary, description, type, status, priority, comments, URL, and additional
+custom fields like acceptance criteria and sprint information. It handles
+errors by logging appropriate warnings or errors.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., "PROJECT-123").
+
+Returns:
+    Dict[str, Any]: A dictionary containing business and technical context from the issue.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_cgraph.svg" width="406" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_icgraph.svg" width="651" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a65f6924819084b7c8d268956a784804a" name="a65f6924819084b7c8d268956a784804a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a65f6924819084b7c8d268956a784804a">&#9670;&nbsp;</a></span>get_issue_details()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Optional[Dict[str, Any]] penify_hook.jira_client.JiraClient.get_issue_details </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>issue_key</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieve details of a JIRA issue based on its key.
+
+This function fetches detailed information about a specified JIRA issue using
+the provided issue key. It first checks if the JIRA client is connected; if
+not, it logs a warning and returns `None`. If connected, it attempts to
+retrieve the issue from the JIRA server. On success, it constructs and returns
+a dictionary containing various details such as the issue's key, summary,
+status, description, assignee, reporter, type, priority, and URL. Errors during
+this process are logged, and `None` is returned.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., "PROJECT-123").
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_cgraph.svg" width="431" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_icgraph.svg" width="100%" height="410"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a00d0f9ae006313a21576362d26ac5ec8" name="a00d0f9ae006313a21576362d26ac5ec8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a00d0f9ae006313a21576362d26ac5ec8">&#9670;&nbsp;</a></span>is_connected()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> bool penify_hook.jira_client.JiraClient.is_connected </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Check if the JIRA client is connected.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="aca8837552d37bfd611de23441a240826" name="aca8837552d37bfd611de23441a240826"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aca8837552d37bfd611de23441a240826">&#9670;&nbsp;</a></span>update_issue_status()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> bool penify_hook.jira_client.JiraClient.update_issue_status </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>issue_key</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>transition_name</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Update the status of a JIRA issue.
+
+This method checks if the JIRA client is connected, retrieves available
+transitions for the given issue, finds the transition ID by name, and updates
+the issue's status accordingly. If any step fails or the specified transition
+is not found, appropriate logs are generated, and False is returned.
+
+Args:
+    issue_key (str): The key of the JIRA issue to be updated.
+    transition_name (str): The name of the desired transition.
+
+Returns:
+    bool: True if the status was successfully updated, False otherwise.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1jira__client_1_1JiraClient_aca8837552d37bfd611de23441a240826_cgraph.svg" width="406" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="afc5c90e53b702f9fc27e2ee7d3f991b9" name="afc5c90e53b702f9fc27e2ee7d3f991b9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afc5c90e53b702f9fc27e2ee7d3f991b9">&#9670;&nbsp;</a></span>jira_api_token</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.jira_client.JiraClient.jira_api_token</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aefb3f96c79358cf3a95d96d3747235b6" name="aefb3f96c79358cf3a95d96d3747235b6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aefb3f96c79358cf3a95d96d3747235b6">&#9670;&nbsp;</a></span>jira_client</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.jira_client.JiraClient.jira_client</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a3c0cfecff02a75cb7001509a595b8197" name="a3c0cfecff02a75cb7001509a595b8197"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3c0cfecff02a75cb7001509a595b8197">&#9670;&nbsp;</a></span>jira_url</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.jira_client.JiraClient.jira_url</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="ae56104d5aa7bda7bb26d169c4b46038c" name="ae56104d5aa7bda7bb26d169c4b46038c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae56104d5aa7bda7bb26d169c4b46038c">&#9670;&nbsp;</a></span>jira_user</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.jira_client.JiraClient.jira_user</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="jira__client_8py.html">jira_client.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1jira__client.html">jira_client</a></li><li class="navelem"><a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html">JiraClient</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient.js b/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient.js
new file mode 100644
index 0000000..f68eed5
--- /dev/null
+++ b/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient.js
@@ -0,0 +1,18 @@
+var classpenify__hook_1_1jira__client_1_1JiraClient =
+[
+    [ "__init__", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a47efc1ec07389c960f2dfb37ba8c09f5", null ],
+    [ "add_comment", "classpenify__hook_1_1jira__client_1_1JiraClient.html#aa1f374116c64cd5f1492ec7f7e40f9c1", null ],
+    [ "enhance_commit_message", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a70d2c5a6432aa6f238da0ff65d49a760", null ],
+    [ "extract_issue_keys", "classpenify__hook_1_1jira__client_1_1JiraClient.html#ad2823ad1d3baaedd38039913c3a97fd7", null ],
+    [ "extract_issue_keys_from_branch", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a093d6456fe053ef7a7862d5d6851910c", null ],
+    [ "format_commit_message_with_jira_info", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a49ea1149758f7f5212149d357b13cc23", null ],
+    [ "get_commit_context_from_issues", "classpenify__hook_1_1jira__client_1_1JiraClient.html#afb41ce6f13c30b1265d439ddf04bf2cd", null ],
+    [ "get_detailed_issue_context", "classpenify__hook_1_1jira__client_1_1JiraClient.html#aa967169a4b7970c67c0947b9ac56f746", null ],
+    [ "get_issue_details", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a65f6924819084b7c8d268956a784804a", null ],
+    [ "is_connected", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a00d0f9ae006313a21576362d26ac5ec8", null ],
+    [ "update_issue_status", "classpenify__hook_1_1jira__client_1_1JiraClient.html#aca8837552d37bfd611de23441a240826", null ],
+    [ "jira_api_token", "classpenify__hook_1_1jira__client_1_1JiraClient.html#afc5c90e53b702f9fc27e2ee7d3f991b9", null ],
+    [ "jira_client", "classpenify__hook_1_1jira__client_1_1JiraClient.html#aefb3f96c79358cf3a95d96d3747235b6", null ],
+    [ "jira_url", "classpenify__hook_1_1jira__client_1_1JiraClient.html#a3c0cfecff02a75cb7001509a595b8197", null ],
+    [ "jira_user", "classpenify__hook_1_1jira__client_1_1JiraClient.html#ae56104d5aa7bda7bb26d169c4b46038c", null ]
+];
\ No newline at end of file
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new file mode 100644
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+<text text-anchor="start" x="8" y="-139.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ extract_issue_keys</text>
+<text text-anchor="start" x="8" y="-128.5" font-family="Helvetica,sans-Serif" font-size="10.00">_from_branch()</text>
+<text text-anchor="start" x="8" y="-117.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ extract_issue_keys()</text>
+<text text-anchor="start" x="8" y="-106.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_issue_details()</text>
+<text text-anchor="start" x="8" y="-95.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ add_comment()</text>
+<text text-anchor="start" x="8" y="-84.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ update_issue_status()</text>
+<text text-anchor="start" x="8" y="-73.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ format_commit_message</text>
+<text text-anchor="start" x="8" y="-62.5" font-family="Helvetica,sans-Serif" font-size="10.00">_with_jira_info()</text>
+<text text-anchor="start" x="8" y="-51.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ get_detailed_issue</text>
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+<text text-anchor="start" x="8" y="-7.5" font-family="Helvetica,sans-Serif" font-size="10.00">+ enhance_commit_message()</text>
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+</g>
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diff --git a/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.map b/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.map
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diff --git a/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.md5 b/docs/html/classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.md5
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+<div class="header">
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+<a href="#pub-methods">Public Member Functions</a> &#124;
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+<tr class="memitem:ad6f06658ca922793f879474f2234518e"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#ad6f06658ca922793f879474f2234518e">litellm</a> (self)</td></tr>
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+<tr class="memitem:a2ad3014dac466ee1d8e00306d0cf2000"><td class="memItemLeft" align="right" valign="top">Dict&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#a2ad3014dac466ee1d8e00306d0cf2000">generate_commit_summary</a> (self, str diff, str message, bool generate_description, Dict repo_details, Dict jira_context=None)</td></tr>
+<tr class="separator:a2ad3014dac466ee1d8e00306d0cf2000"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-attribs" name="pub-attribs"></a>
+Public Attributes</h2></td></tr>
+<tr class="memitem:abc2cb6b1d6d9b5dc16401ca078ec8c10"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#abc2cb6b1d6d9b5dc16401ca078ec8c10">model</a></td></tr>
+<tr class="separator:abc2cb6b1d6d9b5dc16401ca078ec8c10"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pri-attribs" name="pri-attribs"></a>
+Private Attributes</h2></td></tr>
+<tr class="memitem:a76c2e9805f805624ab9c55a9f1f8d362"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#a76c2e9805f805624ab9c55a9f1f8d362">_litellm</a></td></tr>
+<tr class="separator:a76c2e9805f805624ab9c55a9f1f8d362"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><pre class="fragment">Client for interacting with LLM models using LiteLLM.
+</pre> </div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
+<a id="a76d92354f585ab4bb291169f9f530764" name="a76d92354f585ab4bb291169f9f530764"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a76d92354f585ab4bb291169f9f530764">&#9670;&nbsp;</a></span>__init__()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.llm_client.LLMClient.__init__ </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>model</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>api_base</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str &#160;</td>
+          <td class="paramname"><em>api_key</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Initialize the LLM client.
+
+Args:
+    model: LLM model to use (e.g., "gpt-4", "ollama/llama2", etc.)
+    api_base: Base URL for API requests (e.g., "http://localhost:11434" for Ollama)
+    api_key: API key for the LLM service
+</pre> 
+</div>
+</div>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a2ad3014dac466ee1d8e00306d0cf2000" name="a2ad3014dac466ee1d8e00306d0cf2000"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2ad3014dac466ee1d8e00306d0cf2000">&#9670;&nbsp;</a></span>generate_commit_summary()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Dict penify_hook.llm_client.LLMClient.generate_commit_summary </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>diff</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>message</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">bool&#160;</td>
+          <td class="paramname"><em>generate_description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">Dict&#160;</td>
+          <td class="paramname"><em>repo_details</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">Dict &#160;</td>
+          <td class="paramname"><em>jira_context</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generate a concise and descriptive commit summary based on Git diff, user
+instructions, repository details, and optional JIRA context.
+
+This function constructs a prompt for an LLM to produce a commit title and, if
+requested, a detailed description. The summary adheres to Semantic Commit
+Messages guidelines. If JIRA context is provided, it enriches the prompt with
+relevant issue information.
+
+Args:
+    diff (str): Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to include a detailed description in the summary.
+    repo_details (Dict): Details about the repository.
+    jira_context (Dict?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    Dict: A dictionary containing the title and description for the commit. If
+        `generate_description` is False, the 'description' key may be absent.
+
+Raises:
+    ValueError: If the LLM model is not configured.
+</pre> <div class="dynheader">
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+<div class="center"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_cgraph.svg" width="640" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
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+</div>
+</div>
+
+</div>
+</div>
+<a id="ad6f06658ca922793f879474f2234518e" name="ad6f06658ca922793f879474f2234518e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ad6f06658ca922793f879474f2234518e">&#9670;&nbsp;</a></span>litellm()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.llm_client.LLMClient.litellm </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Returns the litellm module, loading it if necessary.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classpenify__hook_1_1llm__client_1_1LLMClient_ad6f06658ca922793f879474f2234518e_icgraph.svg" width="100%" height="300"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Member Data Documentation</h2>
+<a id="a76c2e9805f805624ab9c55a9f1f8d362" name="a76c2e9805f805624ab9c55a9f1f8d362"></a>
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+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="abc2cb6b1d6d9b5dc16401ca078ec8c10" name="abc2cb6b1d6d9b5dc16401ca078ec8c10"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abc2cb6b1d6d9b5dc16401ca078ec8c10">&#9670;&nbsp;</a></span>model</h2>
+
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+</div><div class="memdoc">
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/<a class="el" href="llm__client_8py.html">llm_client.py</a></li>
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+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
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+  <ul>
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+<tr class="memitem:af9c09013055ec39ddde86b487aefcf8b"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#af9c09013055ec39ddde86b487aefcf8b">test_commit_code_with_jira_client</a> (self, mock_error, mock_warning, mock_info, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</a>, mock_doc_gen, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a05adaa9a713ff1be657455d0667bc6be">mock_jira_client</a>, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a20e78370ff5bd6223cc1dd4323a86ea4">mock_llm_client</a>, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#abcd2354a2af4afe19e57877628d3acc2">mock_api_client</a>)</td></tr>
+<tr class="separator:af9c09013055ec39ddde86b487aefcf8b"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acea0d934ee0f2b914b0b893736e8fe4e"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#acea0d934ee0f2b914b0b893736e8fe4e">test_commit_code_with_jira_connection_failure</a> (self, mock_error, mock_warning, mock_info, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</a>, mock_doc_gen, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a05adaa9a713ff1be657455d0667bc6be">mock_jira_client</a>, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#abcd2354a2af4afe19e57877628d3acc2">mock_api_client</a>)</td></tr>
+<tr class="separator:acea0d934ee0f2b914b0b893736e8fe4e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a43c2ff3707124aa48e8eb581106b8691"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a43c2ff3707124aa48e8eb581106b8691">test_commit_code_error_handling</a> (self, mock_print, mock_exit, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a2842f456a8c0f1bf0f4def17c183c04e">mock_git_folder_search</a>, mock_doc_gen, <a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#abcd2354a2af4afe19e57877628d3acc2">mock_api_client</a>)</td></tr>
+<tr class="separator:a43c2ff3707124aa48e8eb581106b8691"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4d04b125e102190a768f65f1948f15bc"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a4d04b125e102190a768f65f1948f15bc">test_setup_commit_parser</a> (self)</td></tr>
+<tr class="separator:a4d04b125e102190a768f65f1948f15bc"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ac13e368262340af98b30fd8ebdac6597"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#ac13e368262340af98b30fd8ebdac6597">test_handle_commit</a> (self, mock_print_info, mock_commit_code, mock_get_token, mock_get_llm_config, mock_get_jira_config)</td></tr>
+<tr class="separator:ac13e368262340af98b30fd8ebdac6597"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="abcd2354a2af4afe19e57877628d3acc2" name="abcd2354a2af4afe19e57877628d3acc2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abcd2354a2af4afe19e57877628d3acc2">&#9670;&nbsp;</a></span>mock_api_client()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_api_client </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Mocks an instance of APIClient using unittest.mock.
+
+This function creates a mock object for APIClient and yields it along
+with the mocked instance. It is useful for testing purposes where real
+API calls should be avoided.
+
+Yields:
+    tuple: A tuple containing the mock of APIClient and the mocked instance of
+        APIClient.
+</pre> 
+</div>
+</div>
+<a id="aa9b25a4bf692b8736164695072a398f6" name="aa9b25a4bf692b8736164695072a398f6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa9b25a4bf692b8736164695072a398f6">&#9670;&nbsp;</a></span>mock_commit_doc_gen()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Mocks the CommitDocGenHook class and returns a MagicMock instance.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to create a mock of the `CommitDocGenHook` class. It then sets up this
+mock to return a new `MagicMock` instance when invoked. The function
+yields both the mock object and the mocked instance, allowing for easy
+testing of functions that rely on `CommitDocGenHook`.
+
+Returns:
+    tuple: A tuple containing two elements:
+        - mock (patch): The patch object used to mock the `CommitDocGenHook`
+        class.
+        - doc_gen_instance (MagicMock): The mocked instance of
+        `CommitDocGenHook`.
+</pre> 
+</div>
+</div>
+<a id="a2842f456a8c0f1bf0f4def17c183c04e" name="a2842f456a8c0f1bf0f4def17c183c04e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2842f456a8c0f1bf0f4def17c183c04e">&#9670;&nbsp;</a></span>mock_git_folder_search()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_git_folder_search </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Mock the `recursive_search_git_folder` function to return a predefined
+git folder path.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to intercept calls to `penify_hook.utils.recursive_search_git_folder`.
+When called, it will return '/mock/git/folder' instead of performing an
+actual search. This is useful for testing purposes where you need a
+consistent response without interacting with the file system.
+
+Yields:
+    MagicMock: A mock object that simulates the `recursive_search_git_folder` function.
+</pre> 
+</div>
+</div>
+<a id="a05adaa9a713ff1be657455d0667bc6be" name="a05adaa9a713ff1be657455d0667bc6be"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a05adaa9a713ff1be657455d0667bc6be">&#9670;&nbsp;</a></span>mock_jira_client()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_jira_client </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Create a mock JIRA client for testing purposes.
+
+This function yields a tuple containing a mock JIRA client instance and
+its `is_connected` method. The mock client is configured to simulate an
+active connection. This is useful for unit tests that require
+interaction with a JIRA client without making actual network calls.
+
+Yields:
+    tuple: A tuple containing the mocked JIRA client instance and its
+        `is_connected` method.
+</pre> 
+</div>
+</div>
+<a id="a20e78370ff5bd6223cc1dd4323a86ea4" name="a20e78370ff5bd6223cc1dd4323a86ea4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a20e78370ff5bd6223cc1dd4323a86ea4">&#9670;&nbsp;</a></span>mock_llm_client()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_llm_client </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Mock an instance of LLMClient for testing purposes.
+
+This function yields a mock object representing an instance of
+LLMClient, which can be used to simulate interactions with a language
+model during testing. The mock is patched to replace the actual
+LLMClient class from the penify_hook module.
+
+Yields:
+    tuple: A tuple containing two elements:
+        - mock (MagicMock): The mock object for LLMClient.
+        - llm_client_instance (MagicMock): An instance of the mocked LLMClient.
+</pre> 
+</div>
+</div>
+<a id="afafbae3c9aeb0e50a75996256c02c8be" name="afafbae3c9aeb0e50a75996256c02c8be"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afafbae3c9aeb0e50a75996256c02c8be">&#9670;&nbsp;</a></span>mock_print_functions()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.mock_print_functions </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Mocks the print functions from `penify_hook.ui_utils` for testing
+purposes.
+
+This function uses Python's `unittest.mock.patch` to replace the actual
+print functions (`print`, `print_warning`, and `print_error`) with mock
+objects. These mock objects can be used in tests to capture calls made
+to these print functions without actually printing anything.
+
+Yields:
+    tuple: A tuple containing three mock objects corresponding to `print_info`,
+        `print_warning`,
+        and `print_error`.
+</pre> 
+</div>
+</div>
+<a id="a43c2ff3707124aa48e8eb581106b8691" name="a43c2ff3707124aa48e8eb581106b8691"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a43c2ff3707124aa48e8eb581106b8691">&#9670;&nbsp;</a></span>test_commit_code_error_handling()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_exit</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder_search</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_doc_gen</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the error handling in the test_commit_code function.
+
+This function sets up mocks to simulate exceptions and test the error
+handling of the commit_code function. It verifies that the function
+correctly prints an error message and exits with a status code of 1 when
+an exception occurs during documentation generation.
+
+Args:
+    mock_print (MagicMock): Mock for the print function, used to verify error message output.
+    mock_exit (MagicMock): Mock for the sys.exit function, used to verify exit behavior.
+    mock_git_folder_search (MagicMock): Mock for the git_folder_search function, returning a mock Git folder
+        path.
+    mock_doc_gen (MagicMock): Mock for the doc_gen function, simulating an exception during
+        documentation generation.
+    mock_api_client (MagicMock): Mock for the API client class, not directly used but referenced in the
+        function signature.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_a43c2ff3707124aa48e8eb581106b8691_cgraph.svg" width="100%" height="494"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="af9c09013055ec39ddde86b487aefcf8b" name="af9c09013055ec39ddde86b487aefcf8b"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9c09013055ec39ddde86b487aefcf8b">&#9670;&nbsp;</a></span>test_commit_code_with_jira_client()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_error</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_warning</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_info</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder_search</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_doc_gen</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_jira_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_llm_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test committing code using a JIRA client.
+
+This function tests the commit_code function with various parameters,
+including API and JIRA credentials. It sets up mock objects for
+dependencies such as the JIRA client, LLM client, and doc generator to
+simulate the behavior of the real classes. The function then calls
+commit_code and verifies that the JIRA client and doc generator are
+called with the correct parameters.
+
+Args:
+    mock_error (MagicMock): A MagicMock object for simulating error logging.
+    mock_warning (MagicMock): A MagicMock object for simulating warning logging.
+    mock_info (MagicMock): A MagicMock object for simulating info logging.
+    mock_git_folder_search (MagicMock): A MagicMock object for simulating the git folder search function.
+    mock_doc_gen (MagicMock): A MagicMock object for simulating the doc generator function.
+    mock_jira_client (MagicMock): A MagicMock object for simulating the JIRA client class.
+    mock_llm_client (MagicMock): A MagicMock object for simulating the LLM client class.
+    mock_api_client (MagicMock): A MagicMock object for simulating the API client class.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_af9c09013055ec39ddde86b487aefcf8b_cgraph.svg" width="100%" height="494"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="acea0d934ee0f2b914b0b893736e8fe4e" name="acea0d934ee0f2b914b0b893736e8fe4e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acea0d934ee0f2b914b0b893736e8fe4e">&#9670;&nbsp;</a></span>test_commit_code_with_jira_connection_failure()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_error</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_warning</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_info</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder_search</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_doc_gen</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_jira_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the commit_code function when JIRA connection fails.
+
+This function tests the scenario where the JIRA connection fails during
+a code commit. It sets up various mocks to simulate different components
+of the system and then calls the `commit_code` function with specific
+parameters. The function is expected to handle the JIRA connection
+failure gracefully by logging an appropriate warning.
+
+Args:
+    mock_error (MagicMock): Mock for error logging.
+    mock_warning (MagicMock): Mock for warning logging.
+    mock_info (MagicMock): Mock for info logging.
+    mock_git_folder_search (MagicMock): Mock for searching the Git folder.
+    mock_doc_gen (MagicMock): Mock for generating documentation.
+    mock_jira_client (MagicMock): Mock for creating a JIRA client.
+    mock_api_client (MagicMock): Mock for creating an API client.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_acea0d934ee0f2b914b0b893736e8fe4e_cgraph.svg" width="100%" height="494"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="acc4b1e4189792a3f7c11d2a745f479c0" name="acc4b1e4189792a3f7c11d2a745f479c0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acc4b1e4189792a3f7c11d2a745f479c0">&#9670;&nbsp;</a></span>test_commit_code_with_llm_client()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_error</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_warning</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_info</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder_search</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_doc_gen</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_llm_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test committing code using an LLM client.
+
+This function sets up mock objects for various components and then calls
+the `commit_code` function with specified parameters. It verifies that
+the correct mocks are created and called with the appropriate arguments.
+
+Args:
+    mock_error (MagicMock): Mock object for error handling.
+    mock_warning (MagicMock): Mock object for warning logging.
+    mock_info (MagicMock): Mock object for info logging.
+    mock_git_folder_search (MagicMock): Mock object to simulate git folder search.
+    mock_doc_gen (MagicMock): Mock object for document generation.
+    mock_llm_client (MagicMock): Mock object for LLM client interaction.
+    mock_api_client (MagicMock): Mock object for API client interaction.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_acc4b1e4189792a3f7c11d2a745f479c0_cgraph.svg" width="100%" height="494"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ac13e368262340af98b30fd8ebdac6597" name="ac13e368262340af98b30fd8ebdac6597"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ac13e368262340af98b30fd8ebdac6597">&#9670;&nbsp;</a></span>test_handle_commit()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_handle_commit </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print_info</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_commit_code</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_llm_config</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_jira_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the handle_commit function with various mock objects.
+
+This function sets up mocks for retrieving LLM configuration, JIRA
+configuration, and commit code. It then creates an argument object and
+calls the handle_commit function. Finally, it verifies that the mock
+functions were called with the expected arguments.
+
+Args:
+    mock_print_info (MagicMock): Mock object for printing information.
+    mock_commit_code (MagicMock): Mock object for committing code.
+    mock_get_token (MagicMock): Mock object for retrieving API token.
+    mock_get_llm_config (MagicMock): Mock object for retrieving LLM configuration.
+    mock_get_jira_config (MagicMock): Mock object for retrieving JIRA configuration.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_ac13e368262340af98b30fd8ebdac6597_cgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a4d04b125e102190a768f65f1948f15bc" name="a4d04b125e102190a768f65f1948f15bc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4d04b125e102190a768f65f1948f15bc">&#9670;&nbsp;</a></span>test_setup_commit_parser()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Set up the argument parser for the commit command.
+
+This function configures an argument parser to handle various options
+for committing changes. It adds three arguments: - '-m' or '--message':
+An optional argument to specify a contextual commit message with a
+default value of "N/A". - '-e' or '--terminal': A boolean flag to open
+an edit terminal before committing. - '-d' or '--description': A boolean
+flag that, when set to False, indicates the generation of a commit
+message with title and description.
+
+Args:
+    parser (MagicMock): The argument parser to be configured.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__commit__commands_1_1TestCommitCommands_a4d04b125e102190a768f65f1948f15bc_cgraph.svg" width="528" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<a class="el" href="test__commit__commands_8py.html">test_commit_commands.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacetests.html">tests</a></li><li class="navelem"><a class="el" href="namespacetests_1_1test__commit__commands.html">test_commit_commands</a></li><li class="navelem"><a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html">TestCommitCommands</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classtests_1_1test__commit__commands_1_1TestCommitCommands.js b/docs/html/classtests_1_1test__commit__commands_1_1TestCommitCommands.js
new file mode 100644
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+var classtests_1_1test__commit__commands_1_1TestCommitCommands =
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+    [ "mock_commit_doc_gen", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#aa9b25a4bf692b8736164695072a398f6", null ],
+    [ "mock_git_folder_search", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a2842f456a8c0f1bf0f4def17c183c04e", null ],
+    [ "mock_jira_client", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a05adaa9a713ff1be657455d0667bc6be", null ],
+    [ "mock_llm_client", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a20e78370ff5bd6223cc1dd4323a86ea4", null ],
+    [ "mock_print_functions", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#afafbae3c9aeb0e50a75996256c02c8be", null ],
+    [ "test_commit_code_error_handling", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a43c2ff3707124aa48e8eb581106b8691", null ],
+    [ "test_commit_code_with_jira_client", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#af9c09013055ec39ddde86b487aefcf8b", null ],
+    [ "test_commit_code_with_jira_connection_failure", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#acea0d934ee0f2b914b0b893736e8fe4e", null ],
+    [ "test_commit_code_with_llm_client", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#acc4b1e4189792a3f7c11d2a745f479c0", null ],
+    [ "test_handle_commit", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#ac13e368262340af98b30fd8ebdac6597", null ],
+    [ "test_setup_commit_parser", "classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a4d04b125e102190a768f65f1948f15bc", null ]
+];
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+  <tr class="even"><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a2e8162082bcdd5652bb37bdb14cf453a">test_get_penify_config_existing_dir</a>(self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</td><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html">tests.test_config_commands.TestConfigCommands</a></td><td class="entry"></td></tr>
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+  <tr class="even"><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a6c0207be563c3de59a6d16277805114c">test_get_token_from_config</a>(self, mock_file_open, mock_path, mock_getenv)</td><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html">tests.test_config_commands.TestConfigCommands</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a3355f7d313bebaa71694387cf2bc5232">test_get_token_from_env</a>(self, mock_file_open, mock_path, mock_getenv)</td><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html">tests.test_config_commands.TestConfigCommands</a></td><td class="entry"></td></tr>
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+  <tr class="odd"><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#af8d62310da2d768e21770f8f01ff5375">test_save_jira_config_success</a>(self, mock_print, mock_json_dump, mock_file_open, mock_path)</td><td class="entry"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html">tests.test_config_commands.TestConfigCommands</a></td><td class="entry"></td></tr>
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+       class="ui-resizable-handle">
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(document).ready(function(){initNavTree('classtests_1_1test__config__commands_1_1TestConfigCommands.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
+</div>
+
+<!-- iframe showing the search results (closed by default) -->
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+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="classtests_1_1test__config__commands_1_1TestConfigCommands-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">tests.test_config_commands.TestConfigCommands Class Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="dynheader">
+Collaboration diagram for tests.test_config_commands.TestConfigCommands:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.svg" width="223" height="440"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:a2e8162082bcdd5652bb37bdb14cf453a"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a2e8162082bcdd5652bb37bdb14cf453a">test_get_penify_config_existing_dir</a> (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</td></tr>
+<tr class="separator:a2e8162082bcdd5652bb37bdb14cf453a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a33d4760eee3b67e1cde3aed755ebb948"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a33d4760eee3b67e1cde3aed755ebb948">test_get_penify_config_new_dir</a> (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</td></tr>
+<tr class="separator:a33d4760eee3b67e1cde3aed755ebb948"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:adf9f2233a3f4cc5725b9d4f05758b167"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#adf9f2233a3f4cc5725b9d4f05758b167">test_get_llm_config_exists</a> (self, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:adf9f2233a3f4cc5725b9d4f05758b167"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:abd12f028b89aa9cd1152c0b9ece5d3cd"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#abd12f028b89aa9cd1152c0b9ece5d3cd">test_get_llm_config_empty</a> (self, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:abd12f028b89aa9cd1152c0b9ece5d3cd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a473984d31452b56acd6ce4011a1248bd"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a473984d31452b56acd6ce4011a1248bd">test_get_llm_config_invalid_json</a> (self, mock_print, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:a473984d31452b56acd6ce4011a1248bd"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aee37b97432821d19758c6325d4c74bcf"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#aee37b97432821d19758c6325d4c74bcf">test_get_jira_config_exists</a> (self, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:aee37b97432821d19758c6325d4c74bcf"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acd8df8219441b9e9871b903a681400d9"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#acd8df8219441b9e9871b903a681400d9">test_save_llm_config_success</a> (self, mock_print, mock_json_dump, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:acd8df8219441b9e9871b903a681400d9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a73a264dfb21e16003e095b79f6eab2ac"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a73a264dfb21e16003e095b79f6eab2ac">test_save_llm_config_failure</a> (self, mock_print, mock_file_open, mock_get_config)</td></tr>
+<tr class="separator:a73a264dfb21e16003e095b79f6eab2ac"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af8d62310da2d768e21770f8f01ff5375"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#af8d62310da2d768e21770f8f01ff5375">test_save_jira_config_success</a> (self, mock_print, mock_json_dump, mock_file_open, mock_path)</td></tr>
+<tr class="separator:af8d62310da2d768e21770f8f01ff5375"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3355f7d313bebaa71694387cf2bc5232"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a3355f7d313bebaa71694387cf2bc5232">test_get_token_from_env</a> (self, mock_file_open, mock_path, mock_getenv)</td></tr>
+<tr class="separator:a3355f7d313bebaa71694387cf2bc5232"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6c0207be563c3de59a6d16277805114c"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a6c0207be563c3de59a6d16277805114c">test_get_token_from_config</a> (self, mock_file_open, mock_path, mock_getenv)</td></tr>
+<tr class="separator:a6c0207be563c3de59a6d16277805114c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a400ca5d9fcdc159714e8df54920f9436"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a400ca5d9fcdc159714e8df54920f9436">test_get_token_not_found</a> (self, mock_file_open, mock_path, mock_getenv)</td></tr>
+<tr class="separator:a400ca5d9fcdc159714e8df54920f9436"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="aee37b97432821d19758c6325d4c74bcf" name="aee37b97432821d19758c6325d4c74bcf"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aee37b97432821d19758c6325d4c74bcf">&#9670;&nbsp;</a></span>test_get_jira_config_exists()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test that get_jira_config returns the correct JIRA configuration when
+the configuration file exists.
+
+It sets up a mock for the configuration file to simulate its existence
+and verifies that the function reads from the correct file and returns
+the expected JIRA configuration dictionary. Additionally, it checks that
+the mock file open is called with the appropriate arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_get_config (MagicMock): A mock for the `get_config` function, which is expected to return a mock
+        configuration file object.
+
+Returns:
+    None: This test function does not explicitly return anything. Its assertions
+        serve as the verification of its correctness.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_aee37b97432821d19758c6325d4c74bcf_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="abd12f028b89aa9cd1152c0b9ece5d3cd" name="abd12f028b89aa9cd1152c0b9ece5d3cd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#abd12f028b89aa9cd1152c0b9ece5d3cd">&#9670;&nbsp;</a></span>test_get_llm_config_empty()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the behavior of get_llm_config when called with an empty
+configuration file.
+
+This function sets up a mock configuration file that exists but returns
+no content. It then calls the `get_llm_config` function and asserts that
+it returns an empty dictionary and that the file open method was called
+exactly once with the correct arguments.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the built-in open function.
+    mock_get_config (MagicMock): A MagicMock object simulating the get_config function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_abd12f028b89aa9cd1152c0b9ece5d3cd_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="adf9f2233a3f4cc5725b9d4f05758b167" name="adf9f2233a3f4cc5725b9d4f05758b167"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adf9f2233a3f4cc5725b9d4f05758b167">&#9670;&nbsp;</a></span>test_get_llm_config_exists()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the get_llm_config function when the configuration file exists.
+
+This function sets up a mock configuration file that exists and returns
+it when called. It then calls the get_llm_config function and asserts
+that it returns the correct configuration dictionary. Additionally, it
+checks that the mock_file_open function was called with the correct
+arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the open() function.
+    mock_get_config (MagicMock): A mock for the get_config() function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_adf9f2233a3f4cc5725b9d4f05758b167_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a473984d31452b56acd6ce4011a1248bd" name="a473984d31452b56acd6ce4011a1248bd"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a473984d31452b56acd6ce4011a1248bd">&#9670;&nbsp;</a></span>test_get_llm_config_invalid_json()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test function to verify the behavior of get_llm_config when reading an
+invalid JSON file.
+
+It sets up a mock configuration file that exists but contains invalid
+JSON. The function is expected to handle this gracefully by printing an
+error message and returning an empty dictionary.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_get_config (MagicMock): Mock for the get_config function, which returns the mock configuration
+        file.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a473984d31452b56acd6ce4011a1248bd_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a2e8162082bcdd5652bb37bdb14cf453a" name="a2e8162082bcdd5652bb37bdb14cf453a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2e8162082bcdd5652bb37bdb14cf453a">&#9670;&nbsp;</a></span>test_get_penify_config_existing_dir()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_makedirs</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the get_penify_config function when the .penify config directory
+exists.
+
+It should not create a new directory and assert that all mocked
+functions were called correctly.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the open() function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the os.makedirs() function.
+    mock_path (MagicMock): A MagicMock object simulating the Path class from pathlib module.
+    mock_git_folder (MagicMock): A MagicMock object simulating the git_folder_search() function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a2e8162082bcdd5652bb37bdb14cf453a_cgraph.svg" width="100%" height="363"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a33d4760eee3b67e1cde3aed755ebb948" name="a33d4760eee3b67e1cde3aed755ebb948"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a33d4760eee3b67e1cde3aed755ebb948">&#9670;&nbsp;</a></span>test_get_penify_config_new_dir()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_makedirs</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_folder</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the behavior of get_penify_config when the .penify directory does
+not exist.
+
+This function mocks various system calls to simulate a scenario where
+the .penify directory is not present. It then asserts that the
+appropriate actions are taken to create the directory and write an empty
+JSON file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the `open` function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the `os.makedirs` function.
+    mock_path (MagicMock): A MagicMock object simulating the `Path` class from `pathlib`.
+    mock_git_folder (MagicMock): A MagicMock object simulating a git folder search function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a33d4760eee3b67e1cde3aed755ebb948_cgraph.svg" width="100%" height="363"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a6c0207be563c3de59a6d16277805114c" name="a6c0207be563c3de59a6d16277805114c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6c0207be563c3de59a6d16277805114c">&#9670;&nbsp;</a></span>test_get_token_from_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_token_from_config </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getenv</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test retrieving a token from the configuration.
+
+This function sets up mocks for environment variables and configuration
+files, calls the `get_token` function, and asserts its behavior. It
+verifies that when the environment variable is not found, the function
+reads a token from a configuration file located in the user's home
+directory.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_path (MagicMock): A mock for the `pathlib.Path` class.
+    mock_getenv (MagicMock): A mock for the `os.getenv` function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a6c0207be563c3de59a6d16277805114c_cgraph.svg" width="100%" height="467"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a3355f7d313bebaa71694387cf2bc5232" name="a3355f7d313bebaa71694387cf2bc5232"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3355f7d313bebaa71694387cf2bc5232">&#9670;&nbsp;</a></span>test_get_token_from_env()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_token_from_env </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getenv</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test retrieving a token from the environment variable.
+
+This function tests the behavior of `get_token` when an environment
+variable is set. It verifies that if the 'PENIFY_API_TOKEN' environment
+variable exists, the function returns its value without attempting to
+read a file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object for simulating file operations.
+    mock_path (MagicMock): A MagicMock object for simulating path operations.
+    mock_getenv (MagicMock): A MagicMock object for simulating environment variable retrieval.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a3355f7d313bebaa71694387cf2bc5232_cgraph.svg" width="100%" height="467"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a400ca5d9fcdc159714e8df54920f9436" name="a400ca5d9fcdc159714e8df54920f9436"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a400ca5d9fcdc159714e8df54920f9436">&#9670;&nbsp;</a></span>test_get_token_not_found()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_get_token_not_found </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getenv</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the get_token function when the API token environment variable is
+not found.
+
+This function tests the scenario where the `PENIFY_API_TOKEN`
+environment variable is not set. It mocks the environment variable to
+return `None`, and verifies that the function returns `None`. The test
+also checks that the environment variable is accessed once and that a
+file open operation is attempted on a configuration file located in the
+user's home directory.
+
+Args:
+    mock_file_open (MagicMock): Mock for the built-in `open` function.
+    mock_path (MagicMock): Mock for the `pathlib.Path` module.
+    mock_getenv (MagicMock): Mock for the `os.getenv` function.
+
+Returns:
+    None: The function does not return anything; it asserts conditions to verify
+        correctness.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a400ca5d9fcdc159714e8df54920f9436_cgraph.svg" width="100%" height="467"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="af8d62310da2d768e21770f8f01ff5375" name="af8d62310da2d768e21770f8f01ff5375"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af8d62310da2d768e21770f8f01ff5375">&#9670;&nbsp;</a></span>test_save_jira_config_success()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_save_jira_config_success </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_json_dump</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_path</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the save_jira_config function to ensure it saves JIRA configuration
+successfully.
+
+This function sets up mocks for various dependencies and tests the
+functionality of saving a JIRA configuration. It asserts that the
+function returns `True`, the JSON dump is called with the correct
+configuration, and the print statement contains the expected message.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_json_dump (MagicMock): Mock for the json.dump function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_path (MagicMock): Mock for the path module.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_af8d62310da2d768e21770f8f01ff5375_cgraph.svg" width="100%" height="363"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a73a264dfb21e16003e095b79f6eab2ac" name="a73a264dfb21e16003e095b79f6eab2ac"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a73a264dfb21e16003e095b79f6eab2ac">&#9670;&nbsp;</a></span>test_save_llm_config_failure()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test function to verify that the save_llm_config function returns False
+and prints an error message when it fails to save the LLM configuration
+due to a permission error.
+
+It sets up a mock configuration file that exists and calls the
+save_llm_config function with valid parameters. The function is expected
+to return False and print "Error saving LLM configuration: Permission
+denied" in case of a failure.
+
+Args:
+    self (TestLLMConfig): An instance of the test class.
+    mock_print (MagicMock): A MagicMock object representing the print function, which will be used
+        to assert that it was called with the expected error message.
+    mock_file_open (MagicMock): A MagicMock object representing the open function, which is not used in
+        this test but is included as a parameter for completeness.
+    mock_get_config (MagicMock): A MagicMock object representing the get_config function, which will be
+        used to return the mock configuration file.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_a73a264dfb21e16003e095b79f6eab2ac_cgraph.svg" width="100%" height="363"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="acd8df8219441b9e9871b903a681400d9" name="acd8df8219441b9e9871b903a681400d9"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acd8df8219441b9e9871b903a681400d9">&#9670;&nbsp;</a></span>test_save_llm_config_success()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_config_commands.TestConfigCommands.test_save_llm_config_success </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_print</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_json_dump</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_open</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_config</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the save_llm_config function successfully.
+
+This function tests that the save_llm_config function correctly saves an
+LLM configuration and handles various mock objects and side effects. It
+ensures that the function returns True upon successful execution, writes
+the expected configuration to a file, and prints a confirmation message.
+
+Args:
+    mock_print (MagicMock): A mock object for the print function.
+    mock_json_dump (MagicMock): A mock object for json.dump.
+    mock_file_open (MagicMock): A mock object for file opening.
+    mock_get_config (MagicMock): A mock object to return a configuration file mock.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__config__commands_1_1TestConfigCommands_acd8df8219441b9e9871b903a681400d9_cgraph.svg" width="100%" height="363"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<a class="el" href="test__config__commands_8py.html">test_config_commands.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacetests.html">tests</a></li><li class="navelem"><a class="el" href="namespacetests_1_1test__config__commands.html">test_config_commands</a></li><li class="navelem"><a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html">TestConfigCommands</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classtests_1_1test__config__commands_1_1TestConfigCommands.js b/docs/html/classtests_1_1test__config__commands_1_1TestConfigCommands.js
new file mode 100644
index 0000000..88e855a
--- /dev/null
+++ b/docs/html/classtests_1_1test__config__commands_1_1TestConfigCommands.js
@@ -0,0 +1,15 @@
+var classtests_1_1test__config__commands_1_1TestConfigCommands =
+[
+    [ "test_get_jira_config_exists", "classtests_1_1test__config__commands_1_1TestConfigCommands.html#aee37b97432821d19758c6325d4c74bcf", null ],
+    [ "test_get_llm_config_empty", "classtests_1_1test__config__commands_1_1TestConfigCommands.html#abd12f028b89aa9cd1152c0b9ece5d3cd", null ],
+    [ "test_get_llm_config_exists", "classtests_1_1test__config__commands_1_1TestConfigCommands.html#adf9f2233a3f4cc5725b9d4f05758b167", null ],
+    [ "test_get_llm_config_invalid_json", "classtests_1_1test__config__commands_1_1TestConfigCommands.html#a473984d31452b56acd6ce4011a1248bd", null ],
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+  <div class="headertitle"><div class="title">tests.test_web_config.TestWebConfig Member List</div></div>
+</div><!--header-->
+<div class="contents">
+
+<p>This is the complete list of members for <a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html">tests.test_web_config.TestWebConfig</a>, including all inherited members.</p>
+<table class="directory">
+  <tr class="even"><td class="entry"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#a06e600222e426b003850509cb1d3190a">test_config_jira_web_server_setup</a>(self, mock_resource_filename, mock_server, mock_webbrowser)</td><td class="entry"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html">tests.test_web_config.TestWebConfig</a></td><td class="entry"></td></tr>
+  <tr class="odd"><td class="entry"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#afc6440352201d207ea8b4d26f8ccfa35">test_config_llm_web_server_setup</a>(self, mock_resource_filename, mock_server, mock_webbrowser)</td><td class="entry"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html">tests.test_web_config.TestWebConfig</a></td><td class="entry"></td></tr>
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+<div class="header">
+  <div class="summary">
+<a href="#pub-methods">Public Member Functions</a> &#124;
+<a href="classtests_1_1test__web__config_1_1TestWebConfig-members.html">List of all members</a>  </div>
+  <div class="headertitle"><div class="title">tests.test_web_config.TestWebConfig Class Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<div class="dynheader">
+Collaboration diagram for tests.test_web_config.TestWebConfig:</div>
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+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="pub-methods" name="pub-methods"></a>
+Public Member Functions</h2></td></tr>
+<tr class="memitem:afc6440352201d207ea8b4d26f8ccfa35"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#afc6440352201d207ea8b4d26f8ccfa35">test_config_llm_web_server_setup</a> (self, mock_resource_filename, mock_server, mock_webbrowser)</td></tr>
+<tr class="separator:afc6440352201d207ea8b4d26f8ccfa35"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a06e600222e426b003850509cb1d3190a"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#a06e600222e426b003850509cb1d3190a">test_config_jira_web_server_setup</a> (self, mock_resource_filename, mock_server, mock_webbrowser)</td></tr>
+<tr class="separator:a06e600222e426b003850509cb1d3190a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Member Function Documentation</h2>
+<a id="a06e600222e426b003850509cb1d3190a" name="a06e600222e426b003850509cb1d3190a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a06e600222e426b003850509cb1d3190a">&#9670;&nbsp;</a></span>test_config_jira_web_server_setup()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_resource_filename</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_server</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_webbrowser</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the configuration and setup of a JIRA web server.
+
+This function tests the entire process of setting up a JIRA web server,
+including mocking necessary resources, configuring the server to shut
+down after handling one request, and verifying that the web browser is
+opened with the correct URL. The function uses several mocks to simulate
+external dependencies such as resource files, servers, and web browsers.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object for simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object for simulating the server setup.
+    mock_webbrowser (MagicMock): A MagicMock object for simulating the web browser opening.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__web__config_1_1TestWebConfig_a06e600222e426b003850509cb1d3190a_cgraph.svg" width="100%" height="462"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="afc6440352201d207ea8b4d26f8ccfa35" name="afc6440352201d207ea8b4d26f8ccfa35"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#afc6440352201d207ea8b4d26f8ccfa35">&#9670;&nbsp;</a></span>test_config_llm_web_server_setup()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>self</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_resource_filename</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_server</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_webbrowser</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Set up and test the web server configuration for an LLM (Large Language
+Model) web interface.
+
+This function configures a mock web server for testing purposes,
+including setting up resource filenames, mocking server behavior, and
+verifying that the web browser is opened and the server starts
+correctly. The function uses various mocks to simulate external
+dependencies such as `resource_filename` and `server`.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object simulating the context manager for the web server.
+    mock_webbrowser (MagicMock): A MagicMock object simulating the `webbrowser` module.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="classtests_1_1test__web__config_1_1TestWebConfig_afc6440352201d207ea8b4d26f8ccfa35_cgraph.svg" width="474" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<hr/>The documentation for this class was generated from the following file:<ul>
+<li>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/<a class="el" href="test__web__config_8py.html">test_web_config.py</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacetests.html">tests</a></li><li class="navelem"><a class="el" href="namespacetests_1_1test__web__config.html">test_web_config</a></li><li class="navelem"><a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html">TestWebConfig</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/classtests_1_1test__web__config_1_1TestWebConfig.js b/docs/html/classtests_1_1test__web__config_1_1TestWebConfig.js
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+    // Licensed under the Apache 2.0 license:
+    // https://www.apache.org/licenses/LICENSE-2.0.html
+    static lightModeIcon = `<svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24px" viewBox="0 0 24 24" width="24px" fill="#FCBF00"><rect fill="none" height="24" width="24"/><circle cx="12" cy="12" opacity=".3" r="3"/><path d="M12,9c1.65,0,3,1.35,3,3s-1.35,3-3,3s-3-1.35-3-3S10.35,9,12,9 M12,7c-2.76,0-5,2.24-5,5s2.24,5,5,5s5-2.24,5-5 S14.76,7,12,7L12,7z M2,13l2,0c0.55,0,1-0.45,1-1s-0.45-1-1-1l-2,0c-0.55,0-1,0.45-1,1S1.45,13,2,13z M20,13l2,0c0.55,0,1-0.45,1-1 s-0.45-1-1-1l-2,0c-0.55,0-1,0.45-1,1S19.45,13,20,13z M11,2v2c0,0.55,0.45,1,1,1s1-0.45,1-1V2c0-0.55-0.45-1-1-1S11,1.45,11,2z M11,20v2c0,0.55,0.45,1,1,1s1-0.45,1-1v-2c0-0.55-0.45-1-1-1C11.45,19,11,19.45,11,20z M5.99,4.58c-0.39-0.39-1.03-0.39-1.41,0 c-0.39,0.39-0.39,1.03,0,1.41l1.06,1.06c0.39,0.39,1.03,0.39,1.41,0s0.39-1.03,0-1.41L5.99,4.58z M18.36,16.95 c-0.39-0.39-1.03-0.39-1.41,0c-0.39,0.39-0.39,1.03,0,1.41l1.06,1.06c0.39,0.39,1.03,0.39,1.41,0c0.39-0.39,0.39-1.03,0-1.41 L18.36,16.95z M19.42,5.99c0.39-0.39,0.39-1.03,0-1.41c-0.39-0.39-1.03-0.39-1.41,0l-1.06,1.06c-0.39,0.39-0.39,1.03,0,1.41 s1.03,0.39,1.41,0L19.42,5.99z M7.05,18.36c0.39-0.39,0.39-1.03,0-1.41c-0.39-0.39-1.03-0.39-1.41,0l-1.06,1.06 c-0.39,0.39-0.39,1.03,0,1.41s1.03,0.39,1.41,0L7.05,18.36z"/></svg>`
+    static darkModeIcon = `<svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24px" viewBox="0 0 24 24" width="24px" fill="#FE9700"><rect fill="none" height="24" width="24"/><path d="M9.37,5.51C9.19,6.15,9.1,6.82,9.1,7.5c0,4.08,3.32,7.4,7.4,7.4c0.68,0,1.35-0.09,1.99-0.27 C17.45,17.19,14.93,19,12,19c-3.86,0-7-3.14-7-7C5,9.07,6.81,6.55,9.37,5.51z" opacity=".3"/><path d="M9.37,5.51C9.19,6.15,9.1,6.82,9.1,7.5c0,4.08,3.32,7.4,7.4,7.4c0.68,0,1.35-0.09,1.99-0.27C17.45,17.19,14.93,19,12,19 c-3.86,0-7-3.14-7-7C5,9.07,6.81,6.55,9.37,5.51z M12,3c-4.97,0-9,4.03-9,9s4.03,9,9,9s9-4.03,9-9c0-0.46-0.04-0.92-0.1-1.36 c-0.98,1.37-2.58,2.26-4.4,2.26c-2.98,0-5.4-2.42-5.4-5.4c0-1.81,0.89-3.42,2.26-4.4C12.92,3.04,12.46,3,12,3L12,3z"/></svg>`
+    static title = "Toggle Light/Dark Mode"
+
+    static prefersLightModeInDarkModeKey = "prefers-light-mode-in-dark-mode"
+    static prefersDarkModeInLightModeKey = "prefers-dark-mode-in-light-mode"
+
+    static _staticConstructor = function() {
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.userPreference)
+        // Update the color scheme when the browsers preference changes
+        // without user interaction on the website.
+        window.matchMedia('(prefers-color-scheme: dark)').addEventListener('change', event => {
+            DoxygenAwesomeDarkModeToggle.onSystemPreferenceChanged()
+        })
+        // Update the color scheme when the tab is made visible again.
+        // It is possible that the appearance was changed in another tab 
+        // while this tab was in the background.
+        document.addEventListener("visibilitychange", visibilityState => {
+            if (document.visibilityState === 'visible') {
+                DoxygenAwesomeDarkModeToggle.onSystemPreferenceChanged()
+            }
+        });
+    }()
+
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                const toggleButton = document.createElement('doxygen-awesome-dark-mode-toggle')
+                toggleButton.title = DoxygenAwesomeDarkModeToggle.title
+                toggleButton.updateIcon()
+
+                window.matchMedia('(prefers-color-scheme: dark)').addEventListener('change', event => {
+                    toggleButton.updateIcon()
+                })
+                document.addEventListener("visibilitychange", visibilityState => {
+                    if (document.visibilityState === 'visible') {
+                        toggleButton.updateIcon()
+                    }
+                });
+
+                $(document).ready(function(){
+                    document.getElementById("MSearchBox").parentNode.appendChild(toggleButton)
+                })
+                $(window).resize(function(){
+                    document.getElementById("MSearchBox").parentNode.appendChild(toggleButton)
+                })
+            })
+        })
+    }
+
+    constructor() {
+        super();
+        this.onclick=this.toggleDarkMode
+    }
+
+    /**
+     * @returns `true` for dark-mode, `false` for light-mode system preference
+     */
+    static get systemPreference() {
+        return window.matchMedia('(prefers-color-scheme: dark)').matches
+    }
+
+    /**
+     * @returns `true` for dark-mode, `false` for light-mode user preference
+     */
+    static get userPreference() {
+        return (!DoxygenAwesomeDarkModeToggle.systemPreference && localStorage.getItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey)) || 
+        (DoxygenAwesomeDarkModeToggle.systemPreference && !localStorage.getItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey))
+    }
+
+    static set userPreference(userPreference) {
+        DoxygenAwesomeDarkModeToggle.darkModeEnabled = userPreference
+        if(!userPreference) {
+            if(DoxygenAwesomeDarkModeToggle.systemPreference) {
+                localStorage.setItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey, true)
+            } else {
+                localStorage.removeItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey)
+            }
+        } else {
+            if(!DoxygenAwesomeDarkModeToggle.systemPreference) {
+                localStorage.setItem(DoxygenAwesomeDarkModeToggle.prefersDarkModeInLightModeKey, true)
+            } else {
+                localStorage.removeItem(DoxygenAwesomeDarkModeToggle.prefersLightModeInDarkModeKey)
+            }
+        }
+        DoxygenAwesomeDarkModeToggle.onUserPreferenceChanged()
+    }
+
+    static enableDarkMode(enable) {
+        if(enable) {
+            DoxygenAwesomeDarkModeToggle.darkModeEnabled = true
+            document.documentElement.classList.add("dark-mode")
+            document.documentElement.classList.remove("light-mode")
+        } else {
+            DoxygenAwesomeDarkModeToggle.darkModeEnabled = false
+            document.documentElement.classList.remove("dark-mode")
+            document.documentElement.classList.add("light-mode")
+        }
+    }
+
+    static onSystemPreferenceChanged() {
+        DoxygenAwesomeDarkModeToggle.darkModeEnabled = DoxygenAwesomeDarkModeToggle.userPreference
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.darkModeEnabled)
+    }
+
+    static onUserPreferenceChanged() {
+        DoxygenAwesomeDarkModeToggle.enableDarkMode(DoxygenAwesomeDarkModeToggle.darkModeEnabled)
+    }
+
+    toggleDarkMode() {
+        DoxygenAwesomeDarkModeToggle.userPreference = !DoxygenAwesomeDarkModeToggle.userPreference
+        this.updateIcon()
+    }
+
+    updateIcon() {
+        if(DoxygenAwesomeDarkModeToggle.darkModeEnabled) {
+            this.innerHTML = DoxygenAwesomeDarkModeToggle.darkModeIcon
+        } else {
+            this.innerHTML = DoxygenAwesomeDarkModeToggle.lightModeIcon
+        }
+    }
+}
+
+customElements.define("doxygen-awesome-dark-mode-toggle", DoxygenAwesomeDarkModeToggle);
diff --git a/docs/html/doxygen-awesome-fragment-copy-button.js b/docs/html/doxygen-awesome-fragment-copy-button.js
new file mode 100644
index 0000000..86c16fd
--- /dev/null
+++ b/docs/html/doxygen-awesome-fragment-copy-button.js
@@ -0,0 +1,85 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeFragmentCopyButton extends HTMLElement {
+    constructor() {
+        super();
+        this.onclick=this.copyContent
+    }
+    static title = "Copy to clipboard"
+    static copyIcon = `<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" width="24" height="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M16 1H4c-1.1 0-2 .9-2 2v14h2V3h12V1zm3 4H8c-1.1 0-2 .9-2 2v14c0 1.1.9 2 2 2h11c1.1 0 2-.9 2-2V7c0-1.1-.9-2-2-2zm0 16H8V7h11v14z"/></svg>`
+    static successIcon = `<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" width="24" height="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M9 16.17L4.83 12l-1.42 1.41L9 19 21 7l-1.41-1.41L9 16.17z"/></svg>`
+    static successDuration = 980
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                if(navigator.clipboard) {
+                    const fragments = document.getElementsByClassName("fragment")
+                    for(const fragment of fragments) {
+                        const fragmentWrapper = document.createElement("div")
+                        fragmentWrapper.className = "doxygen-awesome-fragment-wrapper"
+                        const fragmentCopyButton = document.createElement("doxygen-awesome-fragment-copy-button")
+                        fragmentCopyButton.innerHTML = DoxygenAwesomeFragmentCopyButton.copyIcon
+                        fragmentCopyButton.title = DoxygenAwesomeFragmentCopyButton.title
+                
+                        fragment.parentNode.replaceChild(fragmentWrapper, fragment)
+                        fragmentWrapper.appendChild(fragment)
+                        fragmentWrapper.appendChild(fragmentCopyButton)
+            
+                    }
+                }
+            })
+        })
+    }
+
+
+    copyContent() {
+        const content = this.previousSibling.cloneNode(true)
+        // filter out line number from file listings
+        content.querySelectorAll(".lineno, .ttc").forEach((node) => {
+            node.remove()
+        })
+        let textContent = content.textContent
+        // remove trailing newlines that appear in file listings
+        let numberOfTrailingNewlines = 0
+        while(textContent.charAt(textContent.length - (numberOfTrailingNewlines + 1)) == '\n') {
+            numberOfTrailingNewlines++;
+        }
+        textContent = textContent.substring(0, textContent.length - numberOfTrailingNewlines)
+        navigator.clipboard.writeText(textContent);
+        this.classList.add("success")
+        this.innerHTML = DoxygenAwesomeFragmentCopyButton.successIcon
+        window.setTimeout(() => {
+            this.classList.remove("success")
+            this.innerHTML = DoxygenAwesomeFragmentCopyButton.copyIcon
+        }, DoxygenAwesomeFragmentCopyButton.successDuration);
+    }
+}
+
+customElements.define("doxygen-awesome-fragment-copy-button", DoxygenAwesomeFragmentCopyButton)
diff --git a/docs/html/doxygen-awesome-interactive-toc.js b/docs/html/doxygen-awesome-interactive-toc.js
new file mode 100644
index 0000000..20a9669
--- /dev/null
+++ b/docs/html/doxygen-awesome-interactive-toc.js
@@ -0,0 +1,81 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeInteractiveToc {
+    static topOffset = 38
+    static hideMobileMenu = true
+    static headers = []
+
+    static init() {
+        window.addEventListener("load", () => {
+            let toc = document.querySelector(".contents > .toc")
+            if(toc) {
+                toc.classList.add("interactive")
+                if(!DoxygenAwesomeInteractiveToc.hideMobileMenu) {
+                    toc.classList.add("open")
+                }
+                document.querySelector(".contents > .toc > h3")?.addEventListener("click", () => {
+                    if(toc.classList.contains("open")) {
+                        toc.classList.remove("open")
+                    } else {
+                        toc.classList.add("open")
+                    }
+                })
+
+                document.querySelectorAll(".contents > .toc > ul a").forEach((node) => {
+                    let id = node.getAttribute("href").substring(1)
+                    DoxygenAwesomeInteractiveToc.headers.push({
+                        node: node,
+                        headerNode: document.getElementById(id)
+                    })
+
+                    document.getElementById("doc-content")?.addEventListener("scroll", () => {
+                        DoxygenAwesomeInteractiveToc.update()
+                    })
+                })
+                DoxygenAwesomeInteractiveToc.update()
+            }
+        })
+    }
+
+    static update() {
+        let active = DoxygenAwesomeInteractiveToc.headers[0]?.node
+        DoxygenAwesomeInteractiveToc.headers.forEach((header) => {
+            let position = header.headerNode.getBoundingClientRect().top
+            header.node.classList.remove("active")
+            header.node.classList.remove("aboveActive")
+            if(position < DoxygenAwesomeInteractiveToc.topOffset) {
+                active = header.node
+                active?.classList.add("aboveActive")
+            }
+        })
+        active?.classList.add("active")
+        active?.classList.remove("aboveActive")
+    }
+}
\ No newline at end of file
diff --git a/docs/html/doxygen-awesome-paragraph-link.js b/docs/html/doxygen-awesome-paragraph-link.js
new file mode 100644
index 0000000..e53d132
--- /dev/null
+++ b/docs/html/doxygen-awesome-paragraph-link.js
@@ -0,0 +1,51 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2022 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeParagraphLink {
+    // Icon from https://fonts.google.com/icons
+    // Licensed under the Apache 2.0 license:
+    // https://www.apache.org/licenses/LICENSE-2.0.html
+    static icon = `<svg xmlns="http://www.w3.org/2000/svg" height="20px" viewBox="0 0 24 24" width="20px"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M17 7h-4v2h4c1.65 0 3 1.35 3 3s-1.35 3-3 3h-4v2h4c2.76 0 5-2.24 5-5s-2.24-5-5-5zm-6 8H7c-1.65 0-3-1.35-3-3s1.35-3 3-3h4V7H7c-2.76 0-5 2.24-5 5s2.24 5 5 5h4v-2zm-3-4h8v2H8z"/></svg>`
+    static title = "Permanent Link"
+    static init() {
+        $(function() {
+            $(document).ready(function() {
+                document.querySelectorAll(".contents a.anchor[id], .contents .groupheader > a[id]").forEach((node) => {
+                    let anchorlink = document.createElement("a")
+                    anchorlink.setAttribute("href", `#${node.getAttribute("id")}`)
+                    anchorlink.setAttribute("title", DoxygenAwesomeParagraphLink.title)
+                    anchorlink.classList.add("anchorlink")
+                    node.classList.add("anchor")
+                    anchorlink.innerHTML = DoxygenAwesomeParagraphLink.icon
+                    node.parentElement.appendChild(anchorlink)
+                })
+            })
+        })
+    }
+}
diff --git a/docs/html/doxygen-awesome-sidebar-only-darkmode-toggle.css b/docs/html/doxygen-awesome-sidebar-only-darkmode-toggle.css
new file mode 100644
index 0000000..d207446
--- /dev/null
+++ b/docs/html/doxygen-awesome-sidebar-only-darkmode-toggle.css
@@ -0,0 +1,40 @@
+
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2021 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+@media screen and (min-width: 768px) {
+
+    #MSearchBox {
+        width: calc(var(--side-nav-fixed-width) - calc(2 * var(--spacing-medium)) - var(--searchbar-height) - 1px);
+    }
+
+    #MSearchField {
+        width: calc(var(--side-nav-fixed-width) - calc(2 * var(--spacing-medium)) - 66px - var(--searchbar-height));
+    }
+}
diff --git a/docs/html/doxygen-awesome-sidebar-only.css b/docs/html/doxygen-awesome-sidebar-only.css
new file mode 100644
index 0000000..853f6d6
--- /dev/null
+++ b/docs/html/doxygen-awesome-sidebar-only.css
@@ -0,0 +1,116 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2021 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+ */
+
+html {
+    /* side nav width. MUST be = `TREEVIEW_WIDTH`.
+     * Make sure it is wide enough to contain the page title (logo + title + version)
+     */
+    --side-nav-fixed-width: 335px;
+    --menu-display: none;
+
+    --top-height: 120px;
+    --toc-sticky-top: -25px;
+    --toc-max-height: calc(100vh - 2 * var(--spacing-medium) - 25px);
+}
+
+#projectname {
+    white-space: nowrap;
+}
+
+
+@media screen and (min-width: 768px) {
+    html {
+        --searchbar-background: var(--page-background-color);
+    }
+
+    #side-nav {
+        min-width: var(--side-nav-fixed-width);
+        max-width: var(--side-nav-fixed-width);
+        top: var(--top-height);
+        overflow: visible;
+    }
+
+    #nav-tree, #side-nav {
+        height: calc(100vh - var(--top-height)) !important;
+    }
+
+    #nav-tree {
+        padding: 0;
+    }
+
+    #top {
+        display: block;
+        border-bottom: none;
+        height: var(--top-height);
+        margin-bottom: calc(0px - var(--top-height));
+        max-width: var(--side-nav-fixed-width);
+        overflow: hidden;
+        background: var(--side-nav-background);
+    }
+    #main-nav {
+        float: left;
+        padding-right: 0;
+    }
+
+    .ui-resizable-handle {
+        cursor: default;
+        width: 1px !important;
+        background: var(--separator-color);
+        box-shadow: 0 calc(-2 * var(--top-height)) 0 0 var(--separator-color);
+    }
+
+    #nav-path {
+        position: fixed;
+        right: 0;
+        left: var(--side-nav-fixed-width);
+        bottom: 0;
+        width: auto;
+    }
+
+    #doc-content {
+        height: calc(100vh - 31px) !important;
+        padding-bottom: calc(3 * var(--spacing-large));
+        padding-top: calc(var(--top-height) - 80px);
+        box-sizing: border-box;
+        margin-left: var(--side-nav-fixed-width) !important;
+    }
+
+    #MSearchBox {
+        width: calc(var(--side-nav-fixed-width) - calc(2 * var(--spacing-medium)));
+    }
+
+    #MSearchField {
+        width: calc(var(--side-nav-fixed-width) - calc(2 * var(--spacing-medium)) - 65px);
+    }
+
+    #MSearchResultsWindow {
+        left: var(--spacing-medium) !important;
+        right: auto;
+    }
+}
diff --git a/docs/html/doxygen-awesome-tabs.js b/docs/html/doxygen-awesome-tabs.js
new file mode 100644
index 0000000..06dfd3d
--- /dev/null
+++ b/docs/html/doxygen-awesome-tabs.js
@@ -0,0 +1,90 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+class DoxygenAwesomeTabs {
+
+    static init() {
+        window.addEventListener("load", () => {
+            document.querySelectorAll(".tabbed:not(:empty)").forEach((tabbed, tabbedIndex) => {
+                let tabLinkList = []           
+                tabbed.querySelectorAll(":scope > ul > li").forEach((tab, tabIndex) => {
+                    tab.id = "tab_" + tabbedIndex + "_" + tabIndex
+                    let header = tab.querySelector(".tab-title")
+                    let tabLink = document.createElement("button")
+                    tabLink.classList.add("tab-button")
+                    tabLink.appendChild(header)
+                    header.title = header.textContent
+                    tabLink.addEventListener("click", () => {
+                        tabbed.querySelectorAll(":scope > ul > li").forEach((tab) => {
+                            tab.classList.remove("selected")
+                        })
+                        tabLinkList.forEach((tabLink) => {
+                            tabLink.classList.remove("active")
+                        })
+                        tab.classList.add("selected")
+                        tabLink.classList.add("active")
+                    })
+                    tabLinkList.push(tabLink)
+                    if(tabIndex == 0) {
+                        tab.classList.add("selected")
+                        tabLink.classList.add("active")
+                    }
+                })
+                let tabsOverview = document.createElement("div")
+                tabsOverview.classList.add("tabs-overview")
+                let tabsOverviewContainer = document.createElement("div")
+                tabsOverviewContainer.classList.add("tabs-overview-container")
+                tabLinkList.forEach((tabLink) => {
+                    tabsOverview.appendChild(tabLink)
+                })
+                tabsOverviewContainer.appendChild(tabsOverview)
+                tabbed.before(tabsOverviewContainer)
+
+                function resize() {
+                    let maxTabHeight = 0
+                    tabbed.querySelectorAll(":scope > ul > li").forEach((tab, tabIndex) => {
+                        let visibility = tab.style.display
+                        tab.style.display = "block"
+                        maxTabHeight = Math.max(tab.offsetHeight, maxTabHeight)
+                        tab.style.display = visibility
+                    })
+                    tabbed.style.height = `${maxTabHeight + 10}px`
+                }
+
+                resize()
+                new ResizeObserver(resize).observe(tabbed)
+            })
+        })
+        
+    }
+
+    static resize(tabbed) {
+        
+    }
+}
\ No newline at end of file
diff --git a/docs/html/doxygen-awesome.css b/docs/html/doxygen-awesome.css
new file mode 100644
index 0000000..a44945b
--- /dev/null
+++ b/docs/html/doxygen-awesome.css
@@ -0,0 +1,2675 @@
+/**
+
+Doxygen Awesome
+https://github.com/jothepro/doxygen-awesome-css
+
+MIT License
+
+Copyright (c) 2021 - 2023 jothepro
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+*/
+
+html {
+    /* primary theme color. This will affect the entire websites color scheme: links, arrows, labels, ... */
+    --primary-color: #1779c4;
+    --primary-dark-color: #335c80;
+    --primary-light-color: #70b1e9;
+
+    /* page base colors */
+    --page-background-color: #ffffff;
+    --page-foreground-color: #2f4153;
+    --page-secondary-foreground-color: #6f7e8e;
+
+    /* color for all separators on the website: hr, borders, ... */
+    --separator-color: #dedede;
+
+    /* border radius for all rounded components. Will affect many components, like dropdowns, memitems, codeblocks, ... */
+    --border-radius-large: 8px;
+    --border-radius-small: 4px;
+    --border-radius-medium: 6px;
+
+    /* default spacings. Most components reference these values for spacing, to provide uniform spacing on the page. */
+    --spacing-small: 5px;
+    --spacing-medium: 10px;
+    --spacing-large: 16px;
+
+    /* default box shadow used for raising an element above the normal content. Used in dropdowns, search result, ... */
+    --box-shadow: 0 2px 8px 0 rgba(0,0,0,.075);
+
+    --odd-color: rgba(0,0,0,.028);
+
+    /* font-families. will affect all text on the website
+     * font-family: the normal font for text, headlines, menus
+     * font-family-monospace: used for preformatted text in memtitle, code, fragments
+     */
+    --font-family: -apple-system,BlinkMacSystemFont,Segoe UI,Roboto,Oxygen,Ubuntu,Cantarell,Fira Sans,Droid Sans,Helvetica Neue,sans-serif;
+    --font-family-monospace: ui-monospace,SFMono-Regular,SF Mono,Menlo,Consolas,Liberation Mono,monospace;
+
+    /* font sizes */
+    --page-font-size: 15.6px;
+    --navigation-font-size: 14.4px;
+    --toc-font-size: 13.4px;
+    --code-font-size: 14px; /* affects code, fragment */
+    --title-font-size: 22px;
+
+    /* content text properties. These only affect the page content, not the navigation or any other ui elements */
+    --content-line-height: 27px;
+    /* The content is centered and constraint in it's width. To make the content fill the whole page, set the variable to auto.*/
+    --content-maxwidth: 1050px;
+    --table-line-height: 24px;
+    --toc-sticky-top: var(--spacing-medium);
+    --toc-width: 200px;
+    --toc-max-height: calc(100vh - 2 * var(--spacing-medium) - 85px);
+
+    /* colors for various content boxes: @warning, @note, @deprecated @bug */
+    --warning-color: #faf3d8;
+    --warning-color-dark: #f3a600;
+    --warning-color-darker: #5f4204;
+    --note-color: #e4f3ff;
+    --note-color-dark: #1879C4;
+    --note-color-darker: #274a5c;
+    --todo-color: #e4dafd;
+    --todo-color-dark: #5b2bdd;
+    --todo-color-darker: #2a0d72;
+    --deprecated-color: #ecf0f3;
+    --deprecated-color-dark: #5b6269;
+    --deprecated-color-darker: #43454a;
+    --bug-color: #f8d1cc;
+    --bug-color-dark: #b61825;
+    --bug-color-darker: #75070f;
+    --invariant-color: #d8f1e3;
+    --invariant-color-dark: #44b86f;
+    --invariant-color-darker: #265532;
+
+    /* blockquote colors */
+    --blockquote-background: #f8f9fa;
+    --blockquote-foreground: #636568;
+
+    /* table colors */
+    --tablehead-background: #f1f1f1;
+    --tablehead-foreground: var(--page-foreground-color);
+
+    /* menu-display: block | none
+     * Visibility of the top navigation on screens >= 768px. On smaller screen the menu is always visible.
+     * `GENERATE_TREEVIEW` MUST be enabled!
+     */
+    --menu-display: block;
+
+    --menu-focus-foreground: var(--page-background-color);
+    --menu-focus-background: var(--primary-color);
+    --menu-selected-background: rgba(0,0,0,.05);
+
+
+    --header-background: var(--page-background-color);
+    --header-foreground: var(--page-foreground-color);
+
+    /* searchbar colors */
+    --searchbar-background: var(--side-nav-background);
+    --searchbar-foreground: var(--page-foreground-color);
+
+    /* searchbar size
+     * (`searchbar-width` is only applied on screens >= 768px.
+     * on smaller screens the searchbar will always fill the entire screen width) */
+    --searchbar-height: 33px;
+    --searchbar-width: 210px;
+    --searchbar-border-radius: var(--searchbar-height);
+
+    /* code block colors */
+    --code-background: #f5f5f5;
+    --code-foreground: var(--page-foreground-color);
+
+    /* fragment colors */
+    --fragment-background: #F8F9FA;
+    --fragment-foreground: #37474F;
+    --fragment-keyword: #bb6bb2;
+    --fragment-keywordtype: #8258b3;
+    --fragment-keywordflow: #d67c3b;
+    --fragment-token: #438a59;
+    --fragment-comment: #969696;
+    --fragment-link: #5383d6;
+    --fragment-preprocessor: #46aaa5;
+    --fragment-linenumber-color: #797979;
+    --fragment-linenumber-background: #f4f4f5;
+    --fragment-linenumber-border: #e3e5e7;
+    --fragment-lineheight: 20px;
+
+    /* sidebar navigation (treeview) colors */
+    --side-nav-background: #fbfbfb;
+    --side-nav-foreground: var(--page-foreground-color);
+    --side-nav-arrow-opacity: 0;
+    --side-nav-arrow-hover-opacity: 0.9;
+
+    --toc-background: var(--side-nav-background);
+    --toc-foreground: var(--side-nav-foreground);
+
+    /* height of an item in any tree / collapsible table */
+    --tree-item-height: 30px;
+
+    --memname-font-size: var(--code-font-size);
+    --memtitle-font-size: 18px;
+
+    --webkit-scrollbar-size: 7px;
+    --webkit-scrollbar-padding: 4px;
+    --webkit-scrollbar-color: var(--separator-color);
+
+    --animation-duration: .12s
+}
+
+@media screen and (max-width: 767px) {
+    html {
+        --page-font-size: 16px;
+        --navigation-font-size: 16px;
+        --toc-font-size: 15px;
+        --code-font-size: 15px; /* affects code, fragment */
+        --title-font-size: 22px;
+    }
+}
+
+@media (prefers-color-scheme: dark) {
+    html:not(.light-mode) {
+        color-scheme: dark;
+
+        --primary-color: #1982d2;
+        --primary-dark-color: #86a9c4;
+        --primary-light-color: #4779ac;
+
+        --box-shadow: 0 2px 8px 0 rgba(0,0,0,.35);
+
+        --odd-color: rgba(100,100,100,.06);
+
+        --menu-selected-background: rgba(0,0,0,.4);
+
+        --page-background-color: #1C1D1F;
+        --page-foreground-color: #d2dbde;
+        --page-secondary-foreground-color: #859399;
+        --separator-color: #38393b;
+        --side-nav-background: #252628;
+
+        --code-background: #2a2c2f;
+
+        --tablehead-background: #2a2c2f;
+    
+        --blockquote-background: #222325;
+        --blockquote-foreground: #7e8c92;
+
+        --warning-color: #3b2e04;
+        --warning-color-dark: #f1b602;
+        --warning-color-darker: #ceb670;
+        --note-color: #163750;
+        --note-color-dark: #1982D2;
+        --note-color-darker: #dcf0fa;
+        --todo-color: #2a2536;
+        --todo-color-dark: #7661b3;
+        --todo-color-darker: #ae9ed6;
+        --deprecated-color: #2e323b;
+        --deprecated-color-dark: #738396;
+        --deprecated-color-darker: #abb0bd;
+        --bug-color: #2e1917;
+        --bug-color-dark: #ad2617;
+        --bug-color-darker: #f5b1aa;
+        --invariant-color: #303a35;
+        --invariant-color-dark: #76ce96;
+        --invariant-color-darker: #cceed5;
+
+        --fragment-background: #282c34;
+        --fragment-foreground: #dbe4eb;
+        --fragment-keyword: #cc99cd;
+        --fragment-keywordtype: #ab99cd;
+        --fragment-keywordflow: #e08000;
+        --fragment-token: #7ec699;
+        --fragment-comment: #999999;
+        --fragment-link: #98c0e3;
+        --fragment-preprocessor: #65cabe;
+        --fragment-linenumber-color: #cccccc;
+        --fragment-linenumber-background: #35393c;
+        --fragment-linenumber-border: #1f1f1f;
+    }
+}
+
+/* dark mode variables are defined twice, to support both the dark-mode without and with doxygen-awesome-darkmode-toggle.js */
+html.dark-mode {
+    color-scheme: dark;
+
+    --primary-color: #1982d2;
+    --primary-dark-color: #86a9c4;
+    --primary-light-color: #4779ac;
+
+    --box-shadow: 0 2px 8px 0 rgba(0,0,0,.30);
+
+    --odd-color: rgba(100,100,100,.06);
+
+    --menu-selected-background: rgba(0,0,0,.4);
+
+    --page-background-color: #1C1D1F;
+    --page-foreground-color: #d2dbde;
+    --page-secondary-foreground-color: #859399;
+    --separator-color: #38393b;
+    --side-nav-background: #252628;
+
+    --code-background: #2a2c2f;
+
+    --tablehead-background: #2a2c2f;
+
+    --blockquote-background: #222325;
+    --blockquote-foreground: #7e8c92;
+
+    --warning-color: #3b2e04;
+    --warning-color-dark: #f1b602;
+    --warning-color-darker: #ceb670;
+    --note-color: #163750;
+    --note-color-dark: #1982D2;
+    --note-color-darker: #dcf0fa;
+    --todo-color: #2a2536;
+    --todo-color-dark: #7661b3;
+    --todo-color-darker: #ae9ed6;
+    --deprecated-color: #2e323b;
+    --deprecated-color-dark: #738396;
+    --deprecated-color-darker: #abb0bd;
+    --bug-color: #2e1917;
+    --bug-color-dark: #ad2617;
+    --bug-color-darker: #f5b1aa;
+    --invariant-color: #303a35;
+    --invariant-color-dark: #76ce96;
+    --invariant-color-darker: #cceed5;
+
+    --fragment-background: #282c34;
+    --fragment-foreground: #dbe4eb;
+    --fragment-keyword: #cc99cd;
+    --fragment-keywordtype: #ab99cd;
+    --fragment-keywordflow: #e08000;
+    --fragment-token: #7ec699;
+    --fragment-comment: #999999;
+    --fragment-link: #98c0e3;
+    --fragment-preprocessor: #65cabe;
+    --fragment-linenumber-color: #cccccc;
+    --fragment-linenumber-background: #35393c;
+    --fragment-linenumber-border: #1f1f1f;
+}
+
+body {
+    color: var(--page-foreground-color);
+    background-color: var(--page-background-color);
+    font-size: var(--page-font-size);
+}
+
+body, table, div, p, dl, #nav-tree .label, .title,
+.sm-dox a, .sm-dox a:hover, .sm-dox a:focus, #projectname,
+.SelectItem, #MSearchField, .navpath li.navelem a,
+.navpath li.navelem a:hover, p.reference, p.definition, div.toc li, div.toc h3 {
+    font-family: var(--font-family);
+}
+
+h1, h2, h3, h4, h5 {
+    margin-top: 1em;
+    font-weight: 600;
+    line-height: initial;
+}
+
+p, div, table, dl, p.reference, p.definition {
+    font-size: var(--page-font-size);
+}
+
+p.reference, p.definition {
+    color: var(--page-secondary-foreground-color);
+}
+
+a:link, a:visited, a:hover, a:focus, a:active {
+    color: var(--primary-color) !important;
+    font-weight: 500;
+    background: none;
+}
+
+a.anchor {
+    scroll-margin-top: var(--spacing-large);
+    display: block;
+}
+
+/*
+ Title and top navigation
+ */
+
+#top {
+    background: var(--header-background);
+    border-bottom: 1px solid var(--separator-color);
+}
+
+@media screen and (min-width: 768px) {
+    #top {
+        display: flex;
+        flex-wrap: wrap;
+        justify-content: space-between;
+        align-items: center;
+    }
+}
+
+#main-nav {
+    flex-grow: 5;
+    padding: var(--spacing-small) var(--spacing-medium);
+}
+
+#titlearea {
+    width: auto;
+    padding: var(--spacing-medium) var(--spacing-large);
+    background: none;
+    color: var(--header-foreground);
+    border-bottom: none;
+}
+
+@media screen and (max-width: 767px) {
+    #titlearea {
+        padding-bottom: var(--spacing-small);
+    }
+}
+
+#titlearea table tbody tr {
+    height: auto !important;
+}
+
+#projectname {
+    font-size: var(--title-font-size);
+    font-weight: 600;
+}
+
+#projectnumber {
+    font-family: inherit;
+    font-size: 60%;
+}
+
+#projectbrief {
+    font-family: inherit;
+    font-size: 80%;
+}
+
+#projectlogo {
+    vertical-align: middle;
+}
+
+#projectlogo img {
+    max-height: calc(var(--title-font-size) * 2);
+    margin-right: var(--spacing-small);
+}
+
+.sm-dox, .tabs, .tabs2, .tabs3 {
+    background: none;
+    padding: 0;
+}
+
+.tabs, .tabs2, .tabs3 {
+    border-bottom: 1px solid var(--separator-color);
+    margin-bottom: -1px;
+}
+
+.main-menu-btn-icon, .main-menu-btn-icon:before, .main-menu-btn-icon:after {
+    background: var(--page-secondary-foreground-color);
+}
+
+@media screen and (max-width: 767px) {
+    .sm-dox a span.sub-arrow {
+        background: var(--code-background);
+    }
+
+    #main-menu a.has-submenu span.sub-arrow {
+        color: var(--page-secondary-foreground-color);
+        border-radius: var(--border-radius-medium);
+    }
+
+    #main-menu a.has-submenu:hover span.sub-arrow {
+        color: var(--page-foreground-color);
+    }
+}
+
+@media screen and (min-width: 768px) {
+    .sm-dox li, .tablist li {
+        display: var(--menu-display);
+    }
+
+    .sm-dox a span.sub-arrow {
+        border-color: var(--header-foreground) transparent transparent transparent;
+    }
+
+    .sm-dox a:hover span.sub-arrow {
+        border-color: var(--menu-focus-foreground) transparent transparent transparent;
+    }
+
+    .sm-dox ul a span.sub-arrow {
+        border-color: transparent transparent transparent var(--page-foreground-color);
+    }
+
+    .sm-dox ul a:hover span.sub-arrow {
+        border-color: transparent transparent transparent var(--menu-focus-foreground);
+    }
+}
+
+.sm-dox ul {
+    background: var(--page-background-color);
+    box-shadow: var(--box-shadow);
+    border: 1px solid var(--separator-color);
+    border-radius: var(--border-radius-medium) !important;
+    padding: var(--spacing-small);
+    animation: ease-out 150ms slideInMenu;
+}
+
+@keyframes slideInMenu {
+    from {
+        opacity: 0;
+        transform: translate(0px, -2px);
+    }
+
+    to {
+        opacity: 1;
+        transform: translate(0px, 0px);
+    }
+}
+
+.sm-dox ul a {
+    color: var(--page-foreground-color) !important;
+    background: var(--page-background-color);
+    font-size: var(--navigation-font-size);
+}
+
+.sm-dox>li>ul:after {
+    border-bottom-color: var(--page-background-color) !important;
+}
+
+.sm-dox>li>ul:before {
+    border-bottom-color: var(--separator-color) !important;
+}
+
+.sm-dox ul a:hover, .sm-dox ul a:active, .sm-dox ul a:focus {
+    font-size: var(--navigation-font-size) !important;
+    color: var(--menu-focus-foreground) !important;
+    text-shadow: none;
+    background-color: var(--menu-focus-background);
+    border-radius: var(--border-radius-small) !important;
+}
+
+.sm-dox a, .sm-dox a:focus, .tablist li, .tablist li a, .tablist li.current a {
+    text-shadow: none;
+    background: transparent;
+    background-image: none !important;
+    color: var(--header-foreground) !important;
+    font-weight: normal;
+    font-size: var(--navigation-font-size);
+    border-radius: var(--border-radius-small) !important;
+}
+
+.sm-dox a:focus {
+    outline: auto;
+}
+
+.sm-dox a:hover, .sm-dox a:active, .tablist li a:hover {
+    text-shadow: none;
+    font-weight: normal;
+    background: var(--menu-focus-background);
+    color: var(--menu-focus-foreground) !important;
+    border-radius: var(--border-radius-small) !important;
+    font-size: var(--navigation-font-size);
+}
+
+.tablist li.current {
+    border-radius: var(--border-radius-small);
+    background: var(--menu-selected-background);
+}
+
+.tablist li {
+    margin: var(--spacing-small) 0 var(--spacing-small) var(--spacing-small);
+}
+
+.tablist a {
+    padding: 0 var(--spacing-large);
+}
+
+
+/*
+ Search box
+ */
+
+#MSearchBox {
+    height: var(--searchbar-height);
+    background: var(--searchbar-background);
+    border-radius: var(--searchbar-border-radius);
+    border: 1px solid var(--separator-color);
+    overflow: hidden;
+    width: var(--searchbar-width);
+    position: relative;
+    box-shadow: none;
+    display: block;
+    margin-top: 0;
+}
+
+/* until Doxygen 1.9.4 */
+.left img#MSearchSelect {
+    left: 0;
+    user-select: none;
+    padding-left: 8px;
+}
+
+/* Doxygen 1.9.5 */
+.left span#MSearchSelect {
+    left: 0;
+    user-select: none;
+    margin-left: 8px;
+    padding: 0;
+}
+
+.left #MSearchSelect[src$=".png"] {
+    padding-left: 0
+}
+
+.SelectionMark {
+    user-select: none;
+}
+
+.tabs .left #MSearchSelect {
+    padding-left: 0;
+}
+
+.tabs #MSearchBox {
+    position: absolute;
+    right: var(--spacing-medium);
+}
+
+@media screen and (max-width: 767px) {
+    .tabs #MSearchBox {
+        position: relative;
+        right: 0;
+        margin-left: var(--spacing-medium);
+        margin-top: 0;
+    }
+}
+
+#MSearchSelectWindow, #MSearchResultsWindow {
+    z-index: 9999;
+}
+
+#MSearchBox.MSearchBoxActive {
+    border-color: var(--primary-color);
+    box-shadow: inset 0 0 0 1px var(--primary-color);
+}
+
+#main-menu > li:last-child {
+    margin-right: 0;
+}
+
+@media screen and (max-width: 767px) {
+    #main-menu > li:last-child {
+        height: 50px;
+    }
+}
+
+#MSearchField {
+    font-size: var(--navigation-font-size);
+    height: calc(var(--searchbar-height) - 2px);
+    background: transparent;
+    width: calc(var(--searchbar-width) - 64px);
+}
+
+.MSearchBoxActive #MSearchField {
+    color: var(--searchbar-foreground);
+}
+
+#MSearchSelect {
+    top: calc(calc(var(--searchbar-height) / 2) - 11px);
+}
+
+#MSearchBox span.left, #MSearchBox span.right {
+    background: none;
+    background-image: none;
+}
+
+#MSearchBox span.right {
+    padding-top: calc(calc(var(--searchbar-height) / 2) - 12px);
+    position: absolute;
+    right: var(--spacing-small);
+}
+
+.tabs #MSearchBox span.right {
+    top: calc(calc(var(--searchbar-height) / 2) - 12px);
+}
+
+@keyframes slideInSearchResults {
+    from {
+        opacity: 0;
+        transform: translate(0, 15px);
+    }
+
+    to {
+        opacity: 1;
+        transform: translate(0, 20px);
+    }
+}
+
+#MSearchResultsWindow {
+    left: auto !important;
+    right: var(--spacing-medium);
+    border-radius: var(--border-radius-large);
+    border: 1px solid var(--separator-color);
+    transform: translate(0, 20px);
+    box-shadow: var(--box-shadow);
+    animation: ease-out 280ms slideInSearchResults;
+    background: var(--page-background-color);
+}
+
+iframe#MSearchResults {
+    margin: 4px;
+}
+
+iframe {
+    color-scheme: normal;
+}
+
+@media (prefers-color-scheme: dark) {
+    html:not(.light-mode) iframe#MSearchResults {
+        filter: invert() hue-rotate(180deg);
+    }
+}
+
+html.dark-mode iframe#MSearchResults {
+    filter: invert() hue-rotate(180deg);
+}
+
+#MSearchResults .SRPage {
+    background-color: transparent;
+}
+
+#MSearchResults .SRPage .SREntry {
+    font-size: 10pt;
+    padding: var(--spacing-small) var(--spacing-medium);
+}
+
+#MSearchSelectWindow {
+    border: 1px solid var(--separator-color);
+    border-radius: var(--border-radius-medium);
+    box-shadow: var(--box-shadow);
+    background: var(--page-background-color);
+    padding-top: var(--spacing-small);
+    padding-bottom: var(--spacing-small);
+}
+
+#MSearchSelectWindow a.SelectItem {
+    font-size: var(--navigation-font-size);
+    line-height: var(--content-line-height);
+    margin: 0 var(--spacing-small);
+    border-radius: var(--border-radius-small);
+    color: var(--page-foreground-color) !important;
+    font-weight: normal;
+}
+
+#MSearchSelectWindow a.SelectItem:hover {
+    background: var(--menu-focus-background);
+    color: var(--menu-focus-foreground) !important;
+}
+
+@media screen and (max-width: 767px) {
+    #MSearchBox {
+        margin-top: var(--spacing-medium);
+        margin-bottom: var(--spacing-medium);
+        width: calc(100vw - 30px);
+    }
+
+    #main-menu > li:last-child {
+        float: none !important;
+    }
+
+    #MSearchField {
+        width: calc(100vw - 110px);
+    }
+
+    @keyframes slideInSearchResultsMobile {
+        from {
+            opacity: 0;
+            transform: translate(0, 15px);
+        }
+
+        to {
+            opacity: 1;
+            transform: translate(0, 20px);
+        }
+    }
+
+    #MSearchResultsWindow {
+        left: var(--spacing-medium) !important;
+        right: var(--spacing-medium);
+        overflow: auto;
+        transform: translate(0, 20px);
+        animation: ease-out 280ms slideInSearchResultsMobile;
+        width: auto !important;
+    }
+
+    /*
+     * Overwrites for fixing the searchbox on mobile in doxygen 1.9.2
+     */
+    label.main-menu-btn ~ #searchBoxPos1 {
+        top: 3px !important;
+        right: 6px !important;
+        left: 45px;
+        display: flex;
+    }
+
+    label.main-menu-btn ~ #searchBoxPos1 > #MSearchBox {
+        margin-top: 0;
+        margin-bottom: 0;
+        flex-grow: 2;
+        float: left;
+    }
+}
+
+/*
+ Tree view
+ */
+
+#side-nav {
+    padding: 0 !important;
+    background: var(--side-nav-background);
+    min-width: 8px;
+    max-width: 50vw;
+}
+
+@media screen and (max-width: 767px) {
+    #side-nav {
+        display: none;
+    }
+
+    #doc-content {
+        margin-left: 0 !important;
+    }
+}
+
+#nav-tree {
+    background: transparent;
+    margin-right: 1px;
+}
+
+#nav-tree .label {
+    font-size: var(--navigation-font-size);
+}
+
+#nav-tree .item {
+    height: var(--tree-item-height);
+    line-height: var(--tree-item-height);
+}
+
+#nav-tree .item > a:focus {
+    outline: none;
+}
+
+#nav-sync {
+    bottom: 12px;
+    right: 12px;
+    top: auto !important;
+    user-select: none;
+}
+
+#nav-tree .selected {
+    text-shadow: none;
+    background-image: none;
+    background-color: transparent;
+    position: relative;
+}
+
+#nav-tree .selected::after {
+    content: "";
+    position: absolute;
+    top: 1px;
+    bottom: 1px;
+    left: 0;
+    width: 4px;
+    border-radius: 0 var(--border-radius-small) var(--border-radius-small) 0;
+    background: var(--primary-color);
+}
+
+
+#nav-tree a {
+    color: var(--side-nav-foreground) !important;
+    font-weight: normal;
+}
+
+#nav-tree a:focus {
+    outline-style: auto;
+}
+
+#nav-tree .arrow {
+    opacity: var(--side-nav-arrow-opacity);
+    background: none;
+}
+
+.arrow {
+    color: inherit;
+    cursor: pointer;
+    font-size: 45%;
+    vertical-align: middle;
+    margin-right: 2px;
+    font-family: serif;
+    height: auto;
+    text-align: right;
+}
+
+#nav-tree div.item:hover .arrow, #nav-tree a:focus .arrow {
+    opacity: var(--side-nav-arrow-hover-opacity);
+}
+
+#nav-tree .selected a {
+    color: var(--primary-color) !important;
+    font-weight: bolder;
+    font-weight: 600;
+}
+
+.ui-resizable-e {
+    width: 4px;
+    background: transparent;
+    box-shadow: inset -1px 0 0 0 var(--separator-color);
+}
+
+/*
+ Contents
+ */
+
+div.header {
+    border-bottom: 1px solid var(--separator-color);
+    background-color: var(--page-background-color);
+    background-image: none;
+}
+
+@media screen and (min-width: 1000px) {
+    #doc-content > div > div.contents,
+    .PageDoc > div.contents {
+        display: flex;
+        flex-direction: row-reverse;
+        flex-wrap: nowrap;
+        align-items: flex-start;
+    }
+    
+    div.contents .textblock {
+        min-width: 200px;
+        flex-grow: 1;
+    }
+}
+
+div.contents, div.header .title, div.header .summary {
+    max-width: var(--content-maxwidth);
+}
+
+div.contents, div.header .title  {
+    line-height: initial;
+    margin: calc(var(--spacing-medium) + .2em) auto var(--spacing-medium) auto;
+}
+
+div.header .summary {
+    margin: var(--spacing-medium) auto 0 auto;
+}
+
+div.headertitle {
+    padding: 0;
+}
+
+div.header .title {
+    font-weight: 600;
+    font-size: 225%;
+    padding: var(--spacing-medium) var(--spacing-large);
+    word-break: break-word;
+}
+
+div.header .summary {
+    width: auto;
+    display: block;
+    float: none;
+    padding: 0 var(--spacing-large);
+}
+
+td.memSeparator {
+    border-color: var(--separator-color);
+}
+
+span.mlabel {
+    background: var(--primary-color);
+    border: none;
+    padding: 4px 9px;
+    border-radius: 12px;
+    margin-right: var(--spacing-medium);
+}
+
+span.mlabel:last-of-type {
+    margin-right: 2px;
+}
+
+div.contents {
+    padding: 0 var(--spacing-large);
+}
+
+div.contents p, div.contents li {
+    line-height: var(--content-line-height);
+}
+
+div.contents div.dyncontent {
+    margin: var(--spacing-medium) 0;
+}
+
+@media (prefers-color-scheme: dark) {
+    html:not(.light-mode) div.contents div.dyncontent img,
+    html:not(.light-mode) div.contents center img,
+    html:not(.light-mode) div.contents > table img,
+    html:not(.light-mode) div.contents div.dyncontent iframe,
+    html:not(.light-mode) div.contents center iframe,
+    html:not(.light-mode) div.contents table iframe,
+    html:not(.light-mode) div.contents .dotgraph iframe {
+        filter: brightness(89%) hue-rotate(180deg) invert();
+    }
+}
+
+html.dark-mode div.contents div.dyncontent img,
+html.dark-mode div.contents center img,
+html.dark-mode div.contents > table img,
+html.dark-mode div.contents div.dyncontent iframe,
+html.dark-mode div.contents center iframe,
+html.dark-mode div.contents table iframe,
+html.dark-mode div.contents .dotgraph iframe
+ {
+    filter: brightness(89%) hue-rotate(180deg) invert();
+}
+
+h2.groupheader {
+    border-bottom: 0px;
+    color: var(--page-foreground-color);
+    box-shadow: 
+        100px 0 var(--page-background-color), 
+        -100px 0 var(--page-background-color),
+        100px 0.75px var(--separator-color),
+        -100px 0.75px var(--separator-color),
+        500px 0 var(--page-background-color), 
+        -500px 0 var(--page-background-color),
+        500px 0.75px var(--separator-color),
+        -500px 0.75px var(--separator-color),
+        900px 0 var(--page-background-color), 
+        -900px 0 var(--page-background-color),
+        900px 0.75px var(--separator-color),
+        -900px 0.75px var(--separator-color),
+        1400px 0 var(--page-background-color),
+        -1400px 0 var(--page-background-color), 
+        1400px 0.75px var(--separator-color),
+        -1400px 0.75px var(--separator-color),
+        1900px 0 var(--page-background-color),
+        -1900px 0 var(--page-background-color),
+        1900px 0.75px var(--separator-color),
+        -1900px 0.75px var(--separator-color);
+}
+
+blockquote {
+    margin: 0 var(--spacing-medium) 0 var(--spacing-medium);
+    padding: var(--spacing-small) var(--spacing-large);
+    background: var(--blockquote-background);
+    color: var(--blockquote-foreground);
+    border-left: 0;
+    overflow: visible;
+    border-radius: var(--border-radius-medium);
+    overflow: visible;
+    position: relative;
+}
+
+blockquote::before, blockquote::after {
+    font-weight: bold;
+    font-family: serif;
+    font-size: 360%;
+    opacity: .15;
+    position: absolute;
+}
+
+blockquote::before {
+    content: "“";
+    left: -10px;
+    top: 4px;
+}
+
+blockquote::after {
+    content: "”";
+    right: -8px;
+    bottom: -25px;
+}
+
+blockquote p {
+    margin: var(--spacing-small) 0 var(--spacing-medium) 0;
+}
+.paramname {
+    font-weight: 600;
+    color: var(--primary-dark-color);
+}
+
+.paramname > code {
+    border: 0;
+}
+
+table.params .paramname {
+    font-weight: 600;
+    font-family: var(--font-family-monospace);
+    font-size: var(--code-font-size);
+    padding-right: var(--spacing-small);
+    line-height: var(--table-line-height);
+}
+
+h1.glow, h2.glow, h3.glow, h4.glow, h5.glow, h6.glow {
+    text-shadow: 0 0 15px var(--primary-light-color);
+}
+
+.alphachar a {
+    color: var(--page-foreground-color);
+}
+
+.dotgraph {
+    max-width: 100%;
+    overflow-x: scroll;
+}
+
+.dotgraph .caption {
+    position: sticky;
+    left: 0;
+}
+
+/* Wrap Graphviz graphs with the `interactive_dotgraph` class if `INTERACTIVE_SVG = YES` */
+.interactive_dotgraph .dotgraph iframe {
+    max-width: 100%;
+}
+
+/*
+ Table of Contents
+ */
+
+div.contents .toc {
+    max-height: var(--toc-max-height);
+    min-width: var(--toc-width);
+    border: 0;
+    border-left: 1px solid var(--separator-color);
+    border-radius: 0;
+    background-color: transparent;
+    box-shadow: none;
+    position: sticky;
+    top: var(--toc-sticky-top);
+    padding: 0 var(--spacing-large);
+    margin: var(--spacing-small) 0 var(--spacing-large) var(--spacing-large);
+}
+
+div.toc h3 {
+    color: var(--toc-foreground);
+    font-size: var(--navigation-font-size);
+    margin: var(--spacing-large) 0 var(--spacing-medium) 0;
+}
+
+div.toc li {
+    padding: 0;
+    background: none;
+    line-height: var(--toc-font-size);
+    margin: var(--toc-font-size) 0 0 0;
+}
+
+div.toc li::before {
+    display: none;
+}
+
+div.toc ul {
+    margin-top: 0
+}
+
+div.toc li a {
+    font-size: var(--toc-font-size);
+    color: var(--page-foreground-color) !important;
+    text-decoration: none;
+}
+
+div.toc li a:hover, div.toc li a.active {
+    color: var(--primary-color) !important;
+}
+
+div.toc li a.aboveActive {
+    color: var(--page-secondary-foreground-color) !important;
+}
+
+
+@media screen and (max-width: 999px) {
+    div.contents .toc {
+        max-height: 45vh;
+        float: none;
+        width: auto;
+        margin: 0 0 var(--spacing-medium) 0;
+        position: relative;
+        top: 0;
+        position: relative;
+        border: 1px solid var(--separator-color);
+        border-radius: var(--border-radius-medium);
+        background-color: var(--toc-background);
+        box-shadow: var(--box-shadow);
+    }
+
+    div.contents .toc.interactive {
+        max-height: calc(var(--navigation-font-size) + 2 * var(--spacing-large));
+        overflow: hidden;
+    }
+
+    div.contents .toc > h3 {
+        -webkit-tap-highlight-color: transparent;
+        cursor: pointer;
+        position: sticky;
+        top: 0;
+        background-color: var(--toc-background);
+        margin: 0;
+        padding: var(--spacing-large) 0;
+        display: block;
+    }
+
+    div.contents .toc.interactive > h3::before {
+        content: "";
+        width: 0; 
+        height: 0; 
+        border-left: 4px solid transparent;
+        border-right: 4px solid transparent;
+        border-top: 5px solid var(--primary-color);
+        display: inline-block;
+        margin-right: var(--spacing-small);
+        margin-bottom: calc(var(--navigation-font-size) / 4);
+        transform: rotate(-90deg);
+        transition: transform var(--animation-duration) ease-out;
+    }
+
+    div.contents .toc.interactive.open > h3::before {
+        transform: rotate(0deg);
+    }
+
+    div.contents .toc.interactive.open {
+        max-height: 45vh;
+        overflow: auto;
+        transition: max-height 0.2s ease-in-out;
+    }
+
+    div.contents .toc a, div.contents .toc a.active {
+        color: var(--primary-color) !important;
+    }
+
+    div.contents .toc a:hover {
+        text-decoration: underline;
+    }
+}
+
+/*
+ Code & Fragments
+ */
+
+code, div.fragment, pre.fragment {
+    border-radius: var(--border-radius-small);
+    border: 1px solid var(--separator-color);
+    overflow: hidden;
+}
+
+code {
+    display: inline;
+    background: var(--code-background);
+    color: var(--code-foreground);
+    padding: 2px 6px;
+}
+
+div.fragment, pre.fragment {
+    margin: var(--spacing-medium) 0;
+    padding: calc(var(--spacing-large) - (var(--spacing-large) / 6)) var(--spacing-large);
+    background: var(--fragment-background);
+    color: var(--fragment-foreground);
+    overflow-x: auto;
+}
+
+@media screen and (max-width: 767px) {
+    div.fragment, pre.fragment {
+        border-top-right-radius: 0;
+        border-bottom-right-radius: 0;
+        border-right: 0;
+    }
+
+    .contents > div.fragment,
+    .textblock > div.fragment,
+    .textblock > pre.fragment,
+    .textblock > .tabbed > ul > li > div.fragment,
+    .textblock > .tabbed > ul > li > pre.fragment,
+    .contents > .doxygen-awesome-fragment-wrapper > div.fragment,
+    .textblock > .doxygen-awesome-fragment-wrapper > div.fragment,
+    .textblock > .doxygen-awesome-fragment-wrapper > pre.fragment,
+    .textblock > .tabbed > ul > li > .doxygen-awesome-fragment-wrapper > div.fragment,
+    .textblock > .tabbed > ul > li > .doxygen-awesome-fragment-wrapper > pre.fragment {
+        margin: var(--spacing-medium) calc(0px - var(--spacing-large));
+        border-radius: 0;
+        border-left: 0;
+    }
+
+    .textblock li > .fragment,
+    .textblock li > .doxygen-awesome-fragment-wrapper > .fragment {
+        margin: var(--spacing-medium) calc(0px - var(--spacing-large));
+    }
+
+    .memdoc li > .fragment,
+    .memdoc li > .doxygen-awesome-fragment-wrapper > .fragment {
+        margin: var(--spacing-medium) calc(0px - var(--spacing-medium));
+    }
+
+    .textblock ul, .memdoc ul {
+        overflow: initial;
+    }
+
+    .memdoc > div.fragment,
+    .memdoc > pre.fragment,
+    dl dd > div.fragment,
+    dl dd pre.fragment,
+    .memdoc > .doxygen-awesome-fragment-wrapper > div.fragment,
+    .memdoc > .doxygen-awesome-fragment-wrapper > pre.fragment,
+    dl dd > .doxygen-awesome-fragment-wrapper > div.fragment,
+    dl dd .doxygen-awesome-fragment-wrapper > pre.fragment {
+        margin: var(--spacing-medium) calc(0px - var(--spacing-medium));
+        border-radius: 0;
+        border-left: 0;
+    }
+}
+
+code, code a, pre.fragment, div.fragment, div.fragment .line, div.fragment span, div.fragment .line a, div.fragment .line span {
+    font-family: var(--font-family-monospace);
+    font-size: var(--code-font-size) !important;
+}
+
+div.line:after {
+    margin-right: var(--spacing-medium);
+}
+
+div.fragment .line, pre.fragment {
+    white-space: pre;
+    word-wrap: initial;
+    line-height: var(--fragment-lineheight);
+}
+
+div.fragment span.keyword {
+    color: var(--fragment-keyword);
+}
+
+div.fragment span.keywordtype {
+    color: var(--fragment-keywordtype);
+}
+
+div.fragment span.keywordflow {
+    color: var(--fragment-keywordflow);
+}
+
+div.fragment span.stringliteral {
+    color: var(--fragment-token)
+}
+
+div.fragment span.comment {
+    color: var(--fragment-comment);
+}
+
+div.fragment a.code {
+    color: var(--fragment-link) !important;
+}
+
+div.fragment span.preprocessor {
+    color: var(--fragment-preprocessor);
+}
+
+div.fragment span.lineno {
+    display: inline-block;
+    width: 27px;
+    border-right: none;
+    background: var(--fragment-linenumber-background);
+    color: var(--fragment-linenumber-color);
+}
+
+div.fragment span.lineno a {
+    background: none;
+    color: var(--fragment-link) !important;
+}
+
+div.fragment > .line:first-child .lineno {
+    box-shadow: -999999px 0px 0 999999px var(--fragment-linenumber-background), -999998px 0px 0 999999px var(--fragment-linenumber-border);
+    background-color: var(--fragment-linenumber-background) !important;
+}
+
+div.line {
+    border-radius: var(--border-radius-small);
+}
+
+div.line.glow {
+    background-color: var(--primary-light-color);
+    box-shadow: none;
+}
+
+/*
+ dl warning, attention, note, deprecated, bug, ...
+ */
+
+dl.bug dt a, dl.deprecated dt a, dl.todo dt a {
+    font-weight: bold !important;
+}
+
+dl.warning, dl.attention, dl.note, dl.deprecated, dl.bug, dl.invariant, dl.pre, dl.post, dl.todo, dl.remark {
+    padding: var(--spacing-medium);
+    margin: var(--spacing-medium) 0;
+    color: var(--page-background-color);
+    overflow: hidden;
+    margin-left: 0;
+    border-radius: var(--border-radius-small);
+}
+
+dl.section dd {
+    margin-bottom: 2px;
+}
+
+dl.warning, dl.attention {
+    background: var(--warning-color);
+    border-left: 8px solid var(--warning-color-dark);
+    color: var(--warning-color-darker);
+}
+
+dl.warning dt, dl.attention dt {
+    color: var(--warning-color-dark);
+}
+
+dl.note, dl.remark {
+    background: var(--note-color);
+    border-left: 8px solid var(--note-color-dark);
+    color: var(--note-color-darker);
+}
+
+dl.note dt, dl.remark dt {
+    color: var(--note-color-dark);
+}
+
+dl.todo {
+    background: var(--todo-color);
+    border-left: 8px solid var(--todo-color-dark);
+    color: var(--todo-color-darker);
+}
+
+dl.todo dt a {
+    color: var(--todo-color-dark) !important;
+}
+
+dl.bug dt a {
+    color: var(--todo-color-dark) !important;
+}
+
+dl.bug {
+    background: var(--bug-color);
+    border-left: 8px solid var(--bug-color-dark);
+    color: var(--bug-color-darker);
+}
+
+dl.bug dt a {
+    color: var(--bug-color-dark) !important;
+}
+
+dl.deprecated {
+    background: var(--deprecated-color);
+    border-left: 8px solid var(--deprecated-color-dark);
+    color: var(--deprecated-color-darker);
+}
+
+dl.deprecated dt a {
+    color: var(--deprecated-color-dark) !important;
+}
+
+dl.section dd, dl.bug dd, dl.deprecated dd, dl.todo dd {
+    margin-inline-start: 0px;
+}
+
+dl.invariant, dl.pre, dl.post {
+    background: var(--invariant-color);
+    border-left: 8px solid var(--invariant-color-dark);
+    color: var(--invariant-color-darker);
+}
+
+dl.invariant dt, dl.pre dt, dl.post dt {
+    color: var(--invariant-color-dark);
+}
+
+/*
+ memitem
+ */
+
+div.memdoc, div.memproto, h2.memtitle {
+    box-shadow: none;
+    background-image: none;
+    border: none;
+}
+
+div.memdoc {
+    padding: 0 var(--spacing-medium);
+    background: var(--page-background-color);
+}
+
+h2.memtitle, div.memitem {
+    border: 1px solid var(--separator-color);
+    box-shadow: var(--box-shadow);
+}
+
+h2.memtitle {
+    box-shadow: 0px var(--spacing-medium) 0 -1px var(--fragment-background), var(--box-shadow);
+}
+
+div.memitem {
+    transition: none;
+}
+
+div.memproto, h2.memtitle {
+    background: var(--fragment-background);
+}
+
+h2.memtitle {
+    font-weight: 500;
+    font-size: var(--memtitle-font-size);
+    font-family: var(--font-family-monospace);
+    border-bottom: none;
+    border-top-left-radius: var(--border-radius-medium);
+    border-top-right-radius: var(--border-radius-medium);
+    word-break: break-all;
+    position: relative;
+}
+
+h2.memtitle:after {
+    content: "";
+    display: block;
+    background: var(--fragment-background);
+    height: var(--spacing-medium);
+    bottom: calc(0px - var(--spacing-medium));
+    left: 0;
+    right: -14px;
+    position: absolute;
+    border-top-right-radius: var(--border-radius-medium);
+}
+
+h2.memtitle > span.permalink {
+    font-size: inherit;
+}
+
+h2.memtitle > span.permalink > a {
+    text-decoration: none;
+    padding-left: 3px;
+    margin-right: -4px;
+    user-select: none;
+    display: inline-block;
+    margin-top: -6px;
+}
+
+h2.memtitle > span.permalink > a:hover {
+    color: var(--primary-dark-color) !important;
+}
+
+a:target + h2.memtitle, a:target + h2.memtitle + div.memitem {
+    border-color: var(--primary-light-color);
+}
+
+div.memitem {
+    border-top-right-radius: var(--border-radius-medium);
+    border-bottom-right-radius: var(--border-radius-medium);
+    border-bottom-left-radius: var(--border-radius-medium);
+    overflow: hidden;
+    display: block !important;
+}
+
+div.memdoc {
+    border-radius: 0;
+}
+
+div.memproto {
+    border-radius: 0 var(--border-radius-small) 0 0;
+    overflow: auto;
+    border-bottom: 1px solid var(--separator-color);
+    padding: var(--spacing-medium);
+    margin-bottom: -1px;
+}
+
+div.memtitle {
+    border-top-right-radius: var(--border-radius-medium);
+    border-top-left-radius: var(--border-radius-medium);
+}
+
+div.memproto table.memname {
+    font-family: var(--font-family-monospace);
+    color: var(--page-foreground-color);
+    font-size: var(--memname-font-size);
+    text-shadow: none;
+}
+
+div.memproto div.memtemplate {
+    font-family: var(--font-family-monospace);
+    color: var(--primary-dark-color);
+    font-size: var(--memname-font-size);
+    margin-left: 2px;
+    text-shadow: none;
+}
+
+table.mlabels, table.mlabels > tbody {
+    display: block;
+}
+
+td.mlabels-left {
+    width: auto;
+}
+
+td.mlabels-right {
+    margin-top: 3px;
+    position: sticky;
+    left: 0;
+}
+
+table.mlabels > tbody > tr:first-child {
+    display: flex;
+    justify-content: space-between;
+    flex-wrap: wrap;
+}
+
+.memname, .memitem span.mlabels {
+    margin: 0
+}
+
+/*
+ reflist
+ */
+
+dl.reflist {
+    box-shadow: var(--box-shadow);
+    border-radius: var(--border-radius-medium);
+    border: 1px solid var(--separator-color);
+    overflow: hidden;
+    padding: 0;
+}
+
+
+dl.reflist dt, dl.reflist dd {
+    box-shadow: none;
+    text-shadow: none;
+    background-image: none;
+    border: none;
+    padding: 12px;
+}
+
+
+dl.reflist dt {
+    font-weight: 500;
+    border-radius: 0;
+    background: var(--code-background);
+    border-bottom: 1px solid var(--separator-color);
+    color: var(--page-foreground-color)
+}
+
+
+dl.reflist dd {
+    background: none;
+}
+
+/*
+ Table
+ */
+
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname),
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody {
+    display: inline-block;
+    max-width: 100%;
+}
+
+.contents > table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname):not(.classindex) {
+    margin-left: calc(0px - var(--spacing-large));
+    margin-right: calc(0px - var(--spacing-large));
+    max-width: calc(100% + 2 * var(--spacing-large));
+}
+
+table.fieldtable,
+table.markdownTable tbody,
+table.doxtable tbody {
+    border: none;
+    margin: var(--spacing-medium) 0;
+    box-shadow: 0 0 0 1px var(--separator-color);
+    border-radius: var(--border-radius-small);
+}
+
+table.markdownTable, table.doxtable, table.fieldtable {
+    padding: 1px;
+}
+
+table.doxtable caption {
+    display: block;
+}
+
+table.fieldtable {
+    border-collapse: collapse;
+    width: 100%;
+}
+
+th.markdownTableHeadLeft,
+th.markdownTableHeadRight,
+th.markdownTableHeadCenter,
+th.markdownTableHeadNone,
+table.doxtable th {
+    background: var(--tablehead-background);
+    color: var(--tablehead-foreground);
+    font-weight: 600;
+    font-size: var(--page-font-size);
+}
+
+th.markdownTableHeadLeft:first-child,
+th.markdownTableHeadRight:first-child,
+th.markdownTableHeadCenter:first-child,
+th.markdownTableHeadNone:first-child,
+table.doxtable tr th:first-child {
+    border-top-left-radius: var(--border-radius-small);
+}
+
+th.markdownTableHeadLeft:last-child,
+th.markdownTableHeadRight:last-child,
+th.markdownTableHeadCenter:last-child,
+th.markdownTableHeadNone:last-child,
+table.doxtable tr th:last-child {
+    border-top-right-radius: var(--border-radius-small);
+}
+
+table.markdownTable td,
+table.markdownTable th,
+table.fieldtable td,
+table.fieldtable th,
+table.doxtable td,
+table.doxtable th {
+    border: 1px solid var(--separator-color);
+    padding: var(--spacing-small) var(--spacing-medium);
+}
+
+table.markdownTable td:last-child,
+table.markdownTable th:last-child,
+table.fieldtable td:last-child,
+table.fieldtable th:last-child,
+table.doxtable td:last-child,
+table.doxtable th:last-child {
+    border-right: none;
+}
+
+table.markdownTable td:first-child,
+table.markdownTable th:first-child,
+table.fieldtable td:first-child,
+table.fieldtable th:first-child,
+table.doxtable td:first-child,
+table.doxtable th:first-child {
+    border-left: none;
+}
+
+table.markdownTable tr:first-child td,
+table.markdownTable tr:first-child th,
+table.fieldtable tr:first-child td,
+table.fieldtable tr:first-child th,
+table.doxtable tr:first-child td,
+table.doxtable tr:first-child th {
+    border-top: none;
+}
+
+table.markdownTable tr:last-child td,
+table.markdownTable tr:last-child th,
+table.fieldtable tr:last-child td,
+table.fieldtable tr:last-child th,
+table.doxtable tr:last-child td,
+table.doxtable tr:last-child th {
+    border-bottom: none;
+}
+
+table.markdownTable tr, table.doxtable tr {
+    border-bottom: 1px solid var(--separator-color);
+}
+
+table.markdownTable tr:last-child, table.doxtable tr:last-child {
+    border-bottom: none;
+}
+
+.full_width_table table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) {
+    display: block;
+}
+
+.full_width_table table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody {
+    display: table;
+    width: 100%;
+}
+
+table.fieldtable th {
+    font-size: var(--page-font-size);
+    font-weight: 600;
+    background-image: none;
+    background-color: var(--tablehead-background);
+    color: var(--tablehead-foreground);
+}
+
+table.fieldtable td.fieldtype, .fieldtable td.fieldname, .fieldtable td.fielddoc, .fieldtable th {
+    border-bottom: 1px solid var(--separator-color);
+    border-right: 1px solid var(--separator-color);
+}
+
+table.fieldtable tr:last-child td:first-child {
+    border-bottom-left-radius: var(--border-radius-small);
+}
+
+table.fieldtable tr:last-child td:last-child {
+    border-bottom-right-radius: var(--border-radius-small);
+}
+
+.memberdecls td.glow, .fieldtable tr.glow {
+    background-color: var(--primary-light-color);
+    box-shadow: none;
+}
+
+table.memberdecls {
+    display: block;
+    -webkit-tap-highlight-color: transparent;
+}
+
+table.memberdecls tr[class^='memitem'] {
+    font-family: var(--font-family-monospace);
+    font-size: var(--code-font-size);
+}
+
+table.memberdecls tr[class^='memitem'] .memTemplParams {
+    font-family: var(--font-family-monospace);
+    font-size: var(--code-font-size);
+    color: var(--primary-dark-color);
+    white-space: normal;
+}
+
+table.memberdecls .memItemLeft,
+table.memberdecls .memItemRight,
+table.memberdecls .memTemplItemLeft,
+table.memberdecls .memTemplItemRight,
+table.memberdecls .memTemplParams {
+    transition: none;
+    padding-top: var(--spacing-small);
+    padding-bottom: var(--spacing-small);
+    border-top: 1px solid var(--separator-color);
+    border-bottom: 1px solid var(--separator-color);
+    background-color: var(--fragment-background);
+}
+
+table.memberdecls .memTemplItemLeft,
+table.memberdecls .memTemplItemRight {
+    padding-top: 2px;
+}
+
+table.memberdecls .memTemplParams {
+    border-bottom: 0;
+    border-left: 1px solid var(--separator-color);
+    border-right: 1px solid var(--separator-color);
+    border-radius: var(--border-radius-small) var(--border-radius-small) 0 0;
+    padding-bottom: var(--spacing-small);
+}
+
+table.memberdecls .memTemplItemLeft {
+    border-radius: 0 0 0 var(--border-radius-small);
+    border-left: 1px solid var(--separator-color);
+    border-top: 0;
+}
+
+table.memberdecls .memTemplItemRight {
+    border-radius: 0 0 var(--border-radius-small) 0;
+    border-right: 1px solid var(--separator-color);
+    padding-left: 0;
+    border-top: 0;
+}
+
+table.memberdecls .memItemLeft {
+    border-radius: var(--border-radius-small) 0 0 var(--border-radius-small);
+    border-left: 1px solid var(--separator-color);
+    padding-left: var(--spacing-medium);
+    padding-right: 0;
+}
+
+table.memberdecls .memItemRight  {
+    border-radius: 0 var(--border-radius-small) var(--border-radius-small) 0;
+    border-right: 1px solid var(--separator-color);
+    padding-right: var(--spacing-medium);
+    padding-left: 0;
+
+}
+
+table.memberdecls .mdescLeft, table.memberdecls .mdescRight {
+    background: none;
+    color: var(--page-foreground-color);
+    padding: var(--spacing-small) 0;
+}
+
+table.memberdecls .memItemLeft,
+table.memberdecls .memTemplItemLeft {
+    padding-right: var(--spacing-medium);
+}
+
+table.memberdecls .memSeparator {
+    background: var(--page-background-color);
+    height: var(--spacing-large);
+    border: 0;
+    transition: none;
+}
+
+table.memberdecls .groupheader {
+    margin-bottom: var(--spacing-large);
+}
+
+table.memberdecls .inherit_header td {
+    padding: 0 0 var(--spacing-medium) 0;
+    text-indent: -12px;
+    color: var(--page-secondary-foreground-color);
+}
+
+table.memberdecls img[src="closed.png"],
+table.memberdecls img[src="open.png"],
+div.dynheader img[src="open.png"],
+div.dynheader img[src="closed.png"] {
+    width: 0; 
+    height: 0; 
+    border-left: 4px solid transparent;
+    border-right: 4px solid transparent;
+    border-top: 5px solid var(--primary-color);
+    margin-top: 8px;
+    display: block;
+    float: left;
+    margin-left: -10px;
+    transition: transform var(--animation-duration) ease-out;
+}
+
+table.memberdecls img {
+    margin-right: 10px;
+}
+
+table.memberdecls img[src="closed.png"],
+div.dynheader img[src="closed.png"] {
+    transform: rotate(-90deg);
+    
+}
+
+.compoundTemplParams {
+    font-family: var(--font-family-monospace);
+    color: var(--primary-dark-color);
+    font-size: var(--code-font-size);
+}
+
+@media screen and (max-width: 767px) {
+
+    table.memberdecls .memItemLeft,
+    table.memberdecls .memItemRight,
+    table.memberdecls .mdescLeft,
+    table.memberdecls .mdescRight,
+    table.memberdecls .memTemplItemLeft,
+    table.memberdecls .memTemplItemRight,
+    table.memberdecls .memTemplParams {
+        display: block;
+        text-align: left;
+        padding-left: var(--spacing-large);
+        margin: 0 calc(0px - var(--spacing-large)) 0 calc(0px - var(--spacing-large));
+        border-right: none;
+        border-left: none;
+        border-radius: 0;
+        white-space: normal;
+    }
+
+    table.memberdecls .memItemLeft,
+    table.memberdecls .mdescLeft,
+    table.memberdecls .memTemplItemLeft {
+        border-bottom: 0;
+        padding-bottom: 0;
+    }
+
+    table.memberdecls .memTemplItemLeft {
+        padding-top: 0;
+    }
+
+    table.memberdecls .mdescLeft {
+        margin-bottom: calc(0px - var(--page-font-size));
+    }
+
+    table.memberdecls .memItemRight, 
+    table.memberdecls .mdescRight,
+    table.memberdecls .memTemplItemRight {
+        border-top: 0;
+        padding-top: 0;
+        padding-right: var(--spacing-large);
+        overflow-x: auto;
+    }
+
+    table.memberdecls tr[class^='memitem']:not(.inherit) {
+        display: block;
+        width: calc(100vw - 2 * var(--spacing-large));
+    }
+
+    table.memberdecls .mdescRight {
+        color: var(--page-foreground-color);
+    }
+
+    table.memberdecls tr.inherit {
+        visibility: hidden;
+    }
+
+    table.memberdecls tr[style="display: table-row;"] {
+        display: block !important;
+        visibility: visible;
+        width: calc(100vw - 2 * var(--spacing-large));
+        animation: fade .5s;
+    }
+
+    @keyframes fade {
+        0% {
+            opacity: 0;
+            max-height: 0;
+        }
+
+        100% {
+            opacity: 1;
+            max-height: 200px;
+        }
+    }
+}
+
+
+/*
+ Horizontal Rule
+ */
+
+hr {
+    margin-top: var(--spacing-large);
+    margin-bottom: var(--spacing-large);
+    height: 1px;
+    background-color: var(--separator-color);
+    border: 0;
+}
+
+.contents hr {
+    box-shadow: 100px 0 0 var(--separator-color),
+                -100px 0 0 var(--separator-color),
+                500px 0 0 var(--separator-color),
+                -500px 0 0 var(--separator-color),
+                1500px 0 0 var(--separator-color),
+                -1500px 0 0 var(--separator-color),
+                2000px 0 0 var(--separator-color),
+                -2000px 0 0 var(--separator-color);
+}
+
+.contents img, .contents .center, .contents center, .contents div.image object {
+    max-width: 100%;
+    overflow: auto;
+}
+
+@media screen and (max-width: 767px) {
+    .contents .dyncontent > .center, .contents > center {
+        margin-left: calc(0px - var(--spacing-large));
+        margin-right: calc(0px - var(--spacing-large));
+        max-width: calc(100% + 2 * var(--spacing-large));
+    }
+}
+
+/*
+ Directories
+ */
+div.directory {
+    border-top: 1px solid var(--separator-color);
+    border-bottom: 1px solid var(--separator-color);
+    width: auto;
+}
+
+table.directory {
+    font-family: var(--font-family);
+    font-size: var(--page-font-size);
+    font-weight: normal;
+    width: 100%;
+}
+
+table.directory td.entry, table.directory td.desc {
+    padding: calc(var(--spacing-small) / 2) var(--spacing-small);
+    line-height: var(--table-line-height);
+}
+
+table.directory tr.even td:last-child {
+    border-radius: 0 var(--border-radius-small) var(--border-radius-small) 0;
+}
+
+table.directory tr.even td:first-child {
+    border-radius: var(--border-radius-small) 0 0 var(--border-radius-small);
+}
+
+table.directory tr.even:last-child td:last-child {
+    border-radius: 0 var(--border-radius-small) 0 0;
+}
+
+table.directory tr.even:last-child td:first-child {
+    border-radius: var(--border-radius-small) 0 0 0;
+}
+
+table.directory td.desc {
+    min-width: 250px;
+}
+
+table.directory tr.even {
+    background-color: var(--odd-color);
+}
+
+table.directory tr.odd {
+    background-color: transparent;
+}
+
+.icona {
+    width: auto;
+    height: auto;
+    margin: 0 var(--spacing-small);
+}
+
+.icon {
+    background: var(--primary-color);
+    border-radius: var(--border-radius-small);
+    font-size: var(--page-font-size);
+    padding: calc(var(--page-font-size) / 5);
+    line-height: var(--page-font-size);
+    transform: scale(0.8);
+    height: auto;
+    width: var(--page-font-size);
+    user-select: none;
+}
+
+.iconfopen, .icondoc, .iconfclosed {
+    background-position: center;
+    margin-bottom: 0;
+    height: var(--table-line-height);
+}
+
+.icondoc {
+    filter: saturate(0.2);
+}
+
+@media screen and (max-width: 767px) {
+    div.directory {
+        margin-left: calc(0px - var(--spacing-large));
+        margin-right: calc(0px - var(--spacing-large));
+    }
+}
+
+@media (prefers-color-scheme: dark) {
+    html:not(.light-mode) .iconfopen, html:not(.light-mode) .iconfclosed {
+        filter: hue-rotate(180deg) invert();
+    }
+}
+
+html.dark-mode .iconfopen, html.dark-mode .iconfclosed {
+    filter: hue-rotate(180deg) invert();
+}
+
+/*
+ Class list
+ */
+
+.classindex dl.odd {
+    background: var(--odd-color);
+    border-radius: var(--border-radius-small);
+}
+
+.classindex dl.even {
+    background-color: transparent;
+}
+
+/* 
+ Class Index Doxygen 1.8 
+*/
+
+table.classindex {
+    margin-left: 0;
+    margin-right: 0;
+    width: 100%;
+}
+
+table.classindex table div.ah {
+    background-image: none;
+    background-color: initial;
+    border-color: var(--separator-color);
+    color: var(--page-foreground-color);
+    box-shadow: var(--box-shadow);
+    border-radius: var(--border-radius-large);
+    padding: var(--spacing-small);
+}
+
+div.qindex {
+    background-color: var(--odd-color);
+    border-radius: var(--border-radius-small);
+    border: 1px solid var(--separator-color);
+    padding: var(--spacing-small) 0;
+}
+
+/*
+  Footer and nav-path
+ */
+
+#nav-path {
+    width: 100%;
+}
+
+#nav-path ul {
+    background-image: none;
+    background: var(--page-background-color);
+    border: none;
+    border-top: 1px solid var(--separator-color);
+    border-bottom: 1px solid var(--separator-color);
+    border-bottom: 0;
+    box-shadow: 0 0.75px 0 var(--separator-color);
+    font-size: var(--navigation-font-size);
+}
+
+img.footer {
+    width: 60px;
+}
+
+.navpath li.footer {
+    color: var(--page-secondary-foreground-color);
+}
+
+address.footer {
+    color: var(--page-secondary-foreground-color);
+    margin-bottom: var(--spacing-large);
+}
+
+#nav-path li.navelem {
+    background-image: none;
+    display: flex;
+    align-items: center;
+}
+
+.navpath li.navelem a {
+    text-shadow: none;
+    display: inline-block;
+    color: var(--primary-color) !important;
+}
+
+.navpath li.navelem b {
+    color: var(--primary-dark-color);
+    font-weight: 500;
+}
+
+li.navelem {
+    padding: 0;
+    margin-left: -8px;
+}
+
+li.navelem:first-child {
+    margin-left: var(--spacing-large);
+}
+
+li.navelem:first-child:before {
+    display: none;
+}
+
+#nav-path li.navelem:after {
+    content: '';
+    border: 5px solid var(--page-background-color);
+    border-bottom-color: transparent;
+    border-right-color: transparent;
+    border-top-color: transparent;
+    transform: translateY(-1px) scaleY(4.2);
+    z-index: 10;
+    margin-left: 6px;
+}
+
+#nav-path li.navelem:before {
+    content: '';
+    border: 5px solid var(--separator-color);
+    border-bottom-color: transparent;
+    border-right-color: transparent;
+    border-top-color: transparent;
+    transform: translateY(-1px) scaleY(3.2);
+    margin-right: var(--spacing-small);
+}
+
+.navpath li.navelem a:hover {
+    color: var(--primary-color);
+}
+
+/*
+ Scrollbars for Webkit
+*/
+
+#nav-tree::-webkit-scrollbar,
+div.fragment::-webkit-scrollbar,
+pre.fragment::-webkit-scrollbar,
+div.memproto::-webkit-scrollbar,
+.contents center::-webkit-scrollbar,
+.contents .center::-webkit-scrollbar,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody::-webkit-scrollbar,
+div.contents .toc::-webkit-scrollbar,
+.contents .dotgraph::-webkit-scrollbar,
+.contents .tabs-overview-container::-webkit-scrollbar {
+    background: transparent;
+    width: calc(var(--webkit-scrollbar-size) + var(--webkit-scrollbar-padding) + var(--webkit-scrollbar-padding));
+    height: calc(var(--webkit-scrollbar-size) + var(--webkit-scrollbar-padding) + var(--webkit-scrollbar-padding));
+}
+
+#nav-tree::-webkit-scrollbar-thumb,
+div.fragment::-webkit-scrollbar-thumb,
+pre.fragment::-webkit-scrollbar-thumb,
+div.memproto::-webkit-scrollbar-thumb,
+.contents center::-webkit-scrollbar-thumb,
+.contents .center::-webkit-scrollbar-thumb,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody::-webkit-scrollbar-thumb,
+div.contents .toc::-webkit-scrollbar-thumb,
+.contents .dotgraph::-webkit-scrollbar-thumb,
+.contents .tabs-overview-container::-webkit-scrollbar-thumb {
+    background-color: transparent;
+    border: var(--webkit-scrollbar-padding) solid transparent;
+    border-radius: calc(var(--webkit-scrollbar-padding) + var(--webkit-scrollbar-padding));
+    background-clip: padding-box;  
+}
+
+#nav-tree:hover::-webkit-scrollbar-thumb,
+div.fragment:hover::-webkit-scrollbar-thumb,
+pre.fragment:hover::-webkit-scrollbar-thumb,
+div.memproto:hover::-webkit-scrollbar-thumb,
+.contents center:hover::-webkit-scrollbar-thumb,
+.contents .center:hover::-webkit-scrollbar-thumb,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody:hover::-webkit-scrollbar-thumb,
+div.contents .toc:hover::-webkit-scrollbar-thumb,
+.contents .dotgraph:hover::-webkit-scrollbar-thumb,
+.contents .tabs-overview-container:hover::-webkit-scrollbar-thumb {
+    background-color: var(--webkit-scrollbar-color);
+}
+
+#nav-tree::-webkit-scrollbar-track,
+div.fragment::-webkit-scrollbar-track,
+pre.fragment::-webkit-scrollbar-track,
+div.memproto::-webkit-scrollbar-track,
+.contents center::-webkit-scrollbar-track,
+.contents .center::-webkit-scrollbar-track,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody::-webkit-scrollbar-track,
+div.contents .toc::-webkit-scrollbar-track,
+.contents .dotgraph::-webkit-scrollbar-track,
+.contents .tabs-overview-container::-webkit-scrollbar-track {
+    background: transparent;
+}
+
+#nav-tree::-webkit-scrollbar-corner {
+    background-color: var(--side-nav-background);
+}
+
+#nav-tree,
+div.fragment,
+pre.fragment,
+div.memproto,
+.contents center,
+.contents .center,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody,
+div.contents .toc {
+    overflow-x: auto;
+    overflow-x: overlay;
+}
+
+#nav-tree {
+    overflow-x: auto;
+    overflow-y: auto;
+    overflow-y: overlay;
+}
+
+/*
+ Scrollbars for Firefox
+*/
+
+#nav-tree,
+div.fragment,
+pre.fragment,
+div.memproto,
+.contents center,
+.contents .center,
+.contents table:not(.memberdecls):not(.mlabels):not(.fieldtable):not(.memname) tbody,
+div.contents .toc,
+.contents .dotgraph,
+.contents .tabs-overview-container {
+    scrollbar-width: thin;
+}
+
+/*
+  Optional Dark mode toggle button
+*/
+
+doxygen-awesome-dark-mode-toggle {
+    display: inline-block;
+    margin: 0 0 0 var(--spacing-small);
+    padding: 0;
+    width: var(--searchbar-height);
+    height: var(--searchbar-height);
+    background: none;
+    border: none;
+    border-radius: var(--searchbar-height);
+    vertical-align: middle;
+    text-align: center;
+    line-height: var(--searchbar-height);
+    font-size: 22px;
+    display: flex;
+    align-items: center;
+    justify-content: center;
+    user-select: none;
+    cursor: pointer;
+}
+
+doxygen-awesome-dark-mode-toggle > svg {
+    transition: transform var(--animation-duration) ease-in-out;
+}
+
+doxygen-awesome-dark-mode-toggle:active > svg {
+    transform: scale(.5);
+}
+
+doxygen-awesome-dark-mode-toggle:hover {
+    background-color: rgba(0,0,0,.03);
+}
+
+html.dark-mode doxygen-awesome-dark-mode-toggle:hover {
+    background-color: rgba(0,0,0,.18);
+}
+
+/*
+ Optional fragment copy button
+*/
+.doxygen-awesome-fragment-wrapper {
+    position: relative;
+}
+
+doxygen-awesome-fragment-copy-button {
+    opacity: 0;
+    background: var(--fragment-background);
+    width: 28px;
+    height: 28px;
+    position: absolute;
+    right: calc(var(--spacing-large) - (var(--spacing-large) / 2.5));
+    top: calc(var(--spacing-large) - (var(--spacing-large) / 2.5));
+    border: 1px solid var(--fragment-foreground);
+    cursor: pointer;
+    border-radius: var(--border-radius-small);
+    display: flex;
+    justify-content: center;
+    align-items: center;
+}
+
+.doxygen-awesome-fragment-wrapper:hover doxygen-awesome-fragment-copy-button, doxygen-awesome-fragment-copy-button.success {
+    opacity: .28;
+}
+
+doxygen-awesome-fragment-copy-button:hover, doxygen-awesome-fragment-copy-button.success {
+    opacity: 1 !important;
+}
+
+doxygen-awesome-fragment-copy-button:active:not([class~=success]) svg {
+    transform: scale(.91);
+}
+
+doxygen-awesome-fragment-copy-button svg {
+    fill: var(--fragment-foreground);
+    width: 18px;
+    height: 18px;
+}
+
+doxygen-awesome-fragment-copy-button.success svg {
+    fill: rgb(14, 168, 14);
+}
+
+doxygen-awesome-fragment-copy-button.success {
+    border-color: rgb(14, 168, 14);
+}
+
+@media screen and (max-width: 767px) {
+    .textblock > .doxygen-awesome-fragment-wrapper > doxygen-awesome-fragment-copy-button,
+    .textblock li > .doxygen-awesome-fragment-wrapper > doxygen-awesome-fragment-copy-button,
+    .memdoc li > .doxygen-awesome-fragment-wrapper > doxygen-awesome-fragment-copy-button,
+    .memdoc > .doxygen-awesome-fragment-wrapper > doxygen-awesome-fragment-copy-button,
+    dl dd > .doxygen-awesome-fragment-wrapper > doxygen-awesome-fragment-copy-button {
+        right: 0;
+    }
+}
+
+/*
+ Optional paragraph link button
+*/
+
+a.anchorlink {
+    font-size: 90%;
+    margin-left: var(--spacing-small);
+    color: var(--page-foreground-color) !important;
+    text-decoration: none;
+    opacity: .15;
+    display: none;
+    transition: opacity var(--animation-duration) ease-in-out, color var(--animation-duration) ease-in-out;
+}
+
+a.anchorlink svg {
+    fill: var(--page-foreground-color);
+}
+
+h3 a.anchorlink svg, h4 a.anchorlink svg {
+    margin-bottom: -3px;
+    margin-top: -4px;
+}
+
+a.anchorlink:hover {
+    opacity: .45;
+}
+
+h2:hover a.anchorlink, h1:hover a.anchorlink, h3:hover a.anchorlink, h4:hover a.anchorlink  {
+    display: inline-block;
+}
+
+/*
+ Optional tab feature
+*/
+
+.tabbed > ul {
+    padding-inline-start: 0px;
+    margin: 0;
+    padding: var(--spacing-small) 0;
+}
+
+.tabbed > ul > li {
+    display: none;
+}
+
+.tabbed > ul > li.selected {
+    display: block;
+}
+
+.tabs-overview-container {
+    overflow-x: auto;
+    display: block;
+    overflow-y: visible;
+}
+
+.tabs-overview {
+    border-bottom: 1px solid var(--separator-color);
+    display: flex;
+    flex-direction: row;
+}
+
+@media screen and (max-width: 767px) {
+    .tabs-overview-container {
+        margin: 0 calc(0px - var(--spacing-large));
+    }
+    .tabs-overview {
+        padding: 0 var(--spacing-large)
+    }
+}
+
+.tabs-overview button.tab-button {
+    color: var(--page-foreground-color);
+    margin: 0;
+    border: none;
+    background: transparent;
+    padding: calc(var(--spacing-large) / 2) 0;
+    display: inline-block;
+    font-size: var(--page-font-size);
+    cursor: pointer;
+    box-shadow: 0 1px 0 0 var(--separator-color);
+    position: relative;
+    
+    -webkit-tap-highlight-color: transparent;
+}
+
+.tabs-overview button.tab-button .tab-title::before {
+    display: block;
+    content: attr(title);
+    font-weight: 600;
+    height: 0;
+    overflow: hidden;
+    visibility: hidden;
+}
+
+.tabs-overview button.tab-button .tab-title {
+    float: left;
+    white-space: nowrap;
+    font-weight: normal;
+    padding: calc(var(--spacing-large) / 2) var(--spacing-large);
+    border-radius: var(--border-radius-medium);
+    transition: background-color var(--animation-duration) ease-in-out, font-weight var(--animation-duration) ease-in-out;
+}
+
+.tabs-overview button.tab-button:not(:last-child) .tab-title {
+    box-shadow: 8px 0 0 -7px var(--separator-color);
+}
+
+.tabs-overview button.tab-button:hover .tab-title {
+    background: var(--separator-color);
+    box-shadow: none;
+}
+
+.tabs-overview button.tab-button.active .tab-title {
+    font-weight: 600;
+}
+
+.tabs-overview button.tab-button::after {
+    content: '';
+    display: block;
+    position: absolute;
+    left: 0;
+    bottom: 0;
+    right: 0;
+    height: 0;
+    width: 0%;
+    margin: 0 auto;
+    border-radius: var(--border-radius-small) var(--border-radius-small) 0 0;
+    background-color: var(--primary-color);
+    transition: width var(--animation-duration) ease-in-out, height var(--animation-duration) ease-in-out;
+}
+
+.tabs-overview button.tab-button.active::after {
+    width: 100%;
+    box-sizing: border-box;
+    height: 3px;
+}
+
+
+/*
+ Navigation Buttons
+*/
+
+.section_buttons:not(:empty) {
+    margin-top: calc(var(--spacing-large) * 3);
+}
+
+.section_buttons table.markdownTable {
+    display: block;
+    width: 100%;
+}
+
+.section_buttons table.markdownTable tbody {
+    display: table !important;
+    width: 100%;
+    box-shadow: none;
+    border-spacing: 10px;
+}
+
+.section_buttons table.markdownTable td {
+    padding: 0;
+}
+
+.section_buttons table.markdownTable th {
+    display: none;
+}
+
+.section_buttons table.markdownTable tr.markdownTableHead {
+    border: none;
+}
+
+.section_buttons tr th, .section_buttons tr td {
+    background: none;
+    border: none;
+    padding: var(--spacing-large) 0 var(--spacing-small);
+}
+
+.section_buttons a {
+    display: inline-block;
+    border: 1px solid var(--separator-color);
+    border-radius: var(--border-radius-medium);
+    color: var(--page-secondary-foreground-color) !important;
+    text-decoration: none;
+    transition: color var(--animation-duration) ease-in-out, background-color var(--animation-duration) ease-in-out;
+}
+
+.section_buttons a:hover {
+    color: var(--page-foreground-color) !important;
+    background-color: var(--odd-color);
+}
+
+.section_buttons tr td.markdownTableBodyLeft a {
+    padding: var(--spacing-medium) var(--spacing-large) var(--spacing-medium) calc(var(--spacing-large) / 2);
+}
+
+.section_buttons tr td.markdownTableBodyRight a {
+    padding: var(--spacing-medium) calc(var(--spacing-large) / 2) var(--spacing-medium) var(--spacing-large);
+}
+
+.section_buttons tr td.markdownTableBodyLeft a::before,
+.section_buttons tr td.markdownTableBodyRight a::after {
+    color: var(--page-secondary-foreground-color) !important;
+    display: inline-block;
+    transition: color .08s ease-in-out, transform .09s ease-in-out;
+}
+
+.section_buttons tr td.markdownTableBodyLeft a::before {
+    content: '〈';
+    padding-right: var(--spacing-large);
+}
+
+
+.section_buttons tr td.markdownTableBodyRight a::after {
+    content: '〉';
+    padding-left: var(--spacing-large);
+}
+
+
+.section_buttons tr td.markdownTableBodyLeft a:hover::before {
+    color: var(--page-foreground-color) !important;
+    transform: translateX(-3px);
+}
+
+.section_buttons tr td.markdownTableBodyRight a:hover::after {
+    color: var(--page-foreground-color) !important;
+    transform: translateX(3px);
+}
+
+@media screen and (max-width: 450px) {
+    .section_buttons a {
+        width: 100%;
+        box-sizing: border-box;
+    }
+
+    .section_buttons tr td:nth-of-type(1).markdownTableBodyLeft a {
+        border-radius: var(--border-radius-medium) 0 0 var(--border-radius-medium);
+        border-right: none;
+    }
+
+    .section_buttons tr td:nth-of-type(2).markdownTableBodyRight a {
+        border-radius: 0 var(--border-radius-medium) var(--border-radius-medium) 0;
+    }
+}
diff --git a/docs/html/doxygen.css b/docs/html/doxygen.css
new file mode 100644
index 0000000..2010785
--- /dev/null
+++ b/docs/html/doxygen.css
@@ -0,0 +1,1841 @@
+/* The standard CSS for doxygen 1.9.4 */
+
+body, table, div, p, dl {
+	font: 400 14px/22px Roboto,sans-serif;
+}
+
+p.reference, p.definition {
+	font: 400 14px/22px Roboto,sans-serif;
+}
+
+/* @group Heading Levels */
+
+h1.groupheader {
+	font-size: 150%;
+}
+
+.title {
+	font: 400 14px/28px Roboto,sans-serif;
+	font-size: 150%;
+	font-weight: bold;
+	margin: 10px 2px;
+}
+
+h2.groupheader {
+	border-bottom: 1px solid #879ECB;
+	color: #354C7B;
+	font-size: 150%;
+	font-weight: normal;
+	margin-top: 1.75em;
+	padding-top: 8px;
+	padding-bottom: 4px;
+	width: 100%;
+}
+
+h3.groupheader {
+	font-size: 100%;
+}
+
+h1, h2, h3, h4, h5, h6 {
+	-webkit-transition: text-shadow 0.5s linear;
+	-moz-transition: text-shadow 0.5s linear;
+	-ms-transition: text-shadow 0.5s linear;
+	-o-transition: text-shadow 0.5s linear;
+	transition: text-shadow 0.5s linear;
+	margin-right: 15px;
+}
+
+h1.glow, h2.glow, h3.glow, h4.glow, h5.glow, h6.glow {
+	text-shadow: 0 0 15px cyan;
+}
+
+dt {
+	font-weight: bold;
+}
+
+ul.multicol {
+	-moz-column-gap: 1em;
+	-webkit-column-gap: 1em;
+	column-gap: 1em;
+	-moz-column-count: 3;
+	-webkit-column-count: 3;
+	column-count: 3;
+}
+
+p.startli, p.startdd {
+	margin-top: 2px;
+}
+
+th p.starttd, th p.intertd, th p.endtd {
+        font-size: 100%;
+        font-weight: 700;
+}
+
+p.starttd {
+	margin-top: 0px;
+}
+
+p.endli {
+	margin-bottom: 0px;
+}
+
+p.enddd {
+	margin-bottom: 4px;
+}
+
+p.endtd {
+	margin-bottom: 2px;
+}
+
+p.interli {
+}
+
+p.interdd {
+}
+
+p.intertd {
+}
+
+/* @end */
+
+caption {
+	font-weight: bold;
+}
+
+span.legend {
+	font-size: 70%;
+	text-align: center;
+}
+
+h3.version {
+	font-size: 90%;
+	text-align: center;
+}
+
+div.navtab {
+	border-right: 1px solid #A3B4D7;
+	padding-right: 15px;
+	text-align: right;
+	line-height: 110%;
+}
+
+div.navtab table {
+	border-spacing: 0;
+}
+
+td.navtab {
+	padding-right: 6px;
+	padding-left: 6px;
+}
+td.navtabHL {
+	background-image: url('tab_a.png');
+	background-repeat:repeat-x;
+	padding-right: 6px;
+	padding-left: 6px;
+}
+
+td.navtabHL a, td.navtabHL a:visited {
+	color: #fff;
+	text-shadow: 0px 1px 1px rgba(0, 0, 0, 1.0);
+}
+
+a.navtab {
+	font-weight: bold;
+}
+
+div.qindex{
+	text-align: center;
+	width: 100%;
+	line-height: 140%;
+	font-size: 130%;
+	color: #A0A0A0;
+}
+
+dt.alphachar{
+	font-size: 180%;
+	font-weight: bold;
+}
+
+.alphachar a{
+	color: black;
+}
+
+.alphachar a:hover, .alphachar a:visited{
+	text-decoration: none;
+}
+
+.classindex dl {
+	padding: 25px;
+	column-count:1
+}
+
+.classindex dd {
+	display:inline-block;
+	margin-left: 50px;
+	width: 90%;
+	line-height: 1.15em;
+}
+
+.classindex dl.odd {
+	background-color: #F8F9FC;
+}
+
+@media(min-width: 1120px) {
+	.classindex dl {
+		column-count:2
+	}
+}
+
+@media(min-width: 1320px) {
+	.classindex dl {
+		column-count:3
+	}
+}
+
+
+/* @group Link Styling */
+
+a {
+	color: #3D578C;
+	font-weight: normal;
+	text-decoration: none;
+}
+
+.contents a:visited {
+	color: #4665A2;
+}
+
+a:hover {
+	text-decoration: underline;
+}
+
+.contents a.qindexHL:visited {
+        color: #FFFFFF;
+}
+
+a.el {
+	font-weight: bold;
+}
+
+a.elRef {
+}
+
+a.code, a.code:visited, a.line, a.line:visited {
+	color: #4665A2; 
+}
+
+a.codeRef, a.codeRef:visited, a.lineRef, a.lineRef:visited {
+	color: #4665A2; 
+}
+
+a.code.hl_class { /* style for links to class names in code snippets */ }
+a.code.hl_struct { /* style for links to struct names in code snippets */ }
+a.code.hl_union { /* style for links to union names in code snippets */ }
+a.code.hl_interface { /* style for links to interface names in code snippets */ }
+a.code.hl_protocol { /* style for links to protocol names in code snippets */ }
+a.code.hl_category { /* style for links to category names in code snippets */ }
+a.code.hl_exception { /* style for links to exception names in code snippets */ }
+a.code.hl_service { /* style for links to service names in code snippets */ }
+a.code.hl_singleton { /* style for links to singleton names in code snippets */ }
+a.code.hl_concept { /* style for links to concept names in code snippets */ }
+a.code.hl_namespace { /* style for links to namespace names in code snippets */ }
+a.code.hl_package { /* style for links to package names in code snippets */ }
+a.code.hl_define { /* style for links to macro names in code snippets */ }
+a.code.hl_function { /* style for links to function names in code snippets */ }
+a.code.hl_variable { /* style for links to variable names in code snippets */ }
+a.code.hl_typedef { /* style for links to typedef names in code snippets */ }
+a.code.hl_enumvalue { /* style for links to enum value names in code snippets */ }
+a.code.hl_enumeration { /* style for links to enumeration names in code snippets */ }
+a.code.hl_signal { /* style for links to Qt signal names in code snippets */ }
+a.code.hl_slot { /* style for links to Qt slot names in code snippets */ }
+a.code.hl_friend { /* style for links to friend names in code snippets */ }
+a.code.hl_dcop { /* style for links to KDE3 DCOP names in code snippets */ }
+a.code.hl_property { /* style for links to property names in code snippets */ }
+a.code.hl_event { /* style for links to event names in code snippets */ }
+a.code.hl_sequence { /* style for links to sequence names in code snippets */ }
+a.code.hl_dictionary { /* style for links to dictionary names in code snippets */ }
+
+/* @end */
+
+dl.el {
+	margin-left: -1cm;
+}
+
+ul {
+  overflow: visible;
+}
+
+#side-nav ul {
+  overflow: visible; /* reset ul rule for scroll bar in GENERATE_TREEVIEW window */
+}
+
+#main-nav ul {
+  overflow: visible; /* reset ul rule for the navigation bar drop down lists */
+}
+
+.fragment {
+  text-align: left;
+  direction: ltr;
+  overflow-x: auto; /*Fixed: fragment lines overlap floating elements*/
+  overflow-y: hidden;
+}
+
+pre.fragment {
+        border: 1px solid #C4CFE5;
+        background-color: #FBFCFD;
+        padding: 4px 6px;
+        margin: 4px 8px 4px 2px;
+        overflow: auto;
+        word-wrap: break-word;
+        font-size:  9pt;
+        line-height: 125%;
+        font-family: monospace, fixed;
+        font-size: 105%;
+}
+
+div.fragment {
+  padding: 0 0 1px 0; /*Fixed: last line underline overlap border*/
+  margin: 4px 8px 4px 2px;
+	background-color: #FBFCFD;
+	border: 1px solid #C4CFE5;
+}
+
+div.line {
+	font-family: monospace, fixed;
+        font-size: 13px;
+	min-height: 13px;
+	line-height: 1.0;
+	text-wrap: unrestricted;
+	white-space: -moz-pre-wrap; /* Moz */
+	white-space: -pre-wrap;     /* Opera 4-6 */
+	white-space: -o-pre-wrap;   /* Opera 7 */
+	white-space: pre-wrap;      /* CSS3  */
+	word-wrap: break-word;      /* IE 5.5+ */
+	text-indent: -53px;
+	padding-left: 53px;
+	padding-bottom: 0px;
+	margin: 0px;
+	-webkit-transition-property: background-color, box-shadow;
+	-webkit-transition-duration: 0.5s;
+	-moz-transition-property: background-color, box-shadow;
+	-moz-transition-duration: 0.5s;
+	-ms-transition-property: background-color, box-shadow;
+	-ms-transition-duration: 0.5s;
+	-o-transition-property: background-color, box-shadow;
+	-o-transition-duration: 0.5s;
+	transition-property: background-color, box-shadow;
+	transition-duration: 0.5s;
+}
+
+div.line:after {
+    content:"\000A";
+    white-space: pre;
+}
+
+div.line.glow {
+	background-color: cyan;
+	box-shadow: 0 0 10px cyan;
+}
+
+
+span.lineno {
+	padding-right: 4px;
+        margin-right: 9px;
+	text-align: right;
+	border-right: 2px solid #0F0;
+	background-color: #E8E8E8;
+        white-space: pre;
+}
+span.lineno a {
+	background-color: #D8D8D8;
+}
+
+span.lineno a:hover {
+	background-color: #C8C8C8;
+}
+
+.lineno {
+	-webkit-touch-callout: none;
+	-webkit-user-select: none;
+	-khtml-user-select: none;
+	-moz-user-select: none;
+	-ms-user-select: none;
+	user-select: none;
+}
+
+div.ah, span.ah {
+	background-color: black;
+	font-weight: bold;
+	color: #FFFFFF;
+	margin-bottom: 3px;
+	margin-top: 3px;
+	padding: 0.2em;
+	border: solid thin #333;
+	border-radius: 0.5em;
+	-webkit-border-radius: .5em;
+	-moz-border-radius: .5em;
+	box-shadow: 2px 2px 3px #999;
+	-webkit-box-shadow: 2px 2px 3px #999;
+	-moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px;
+	background-image: -webkit-gradient(linear, left top, left bottom, from(#eee), to(#000),color-stop(0.3, #444));
+	background-image: -moz-linear-gradient(center top, #eee 0%, #444 40%, #000 110%);
+}
+
+div.classindex ul {
+        list-style: none;
+        padding-left: 0;
+}
+
+div.classindex span.ai {
+        display: inline-block;
+}
+
+div.groupHeader {
+	margin-left: 16px;
+	margin-top: 12px;
+	font-weight: bold;
+}
+
+div.groupText {
+	margin-left: 16px;
+	font-style: italic;
+}
+
+body {
+	background-color: white;
+	color: black;
+        margin: 0;
+}
+
+div.contents {
+	margin-top: 10px;
+	margin-left: 12px;
+	margin-right: 8px;
+}
+
+td.indexkey {
+	background-color: #EBEFF6;
+	font-weight: bold;
+	border: 1px solid #C4CFE5;
+	margin: 2px 0px 2px 0;
+	padding: 2px 10px;
+        white-space: nowrap;
+        vertical-align: top;
+}
+
+td.indexvalue {
+	background-color: #EBEFF6;
+	border: 1px solid #C4CFE5;
+	padding: 2px 10px;
+	margin: 2px 0px;
+}
+
+tr.memlist {
+	background-color: #EEF1F7;
+}
+
+p.formulaDsp {
+	text-align: center;
+}
+
+img.formulaDsp {
+	
+}
+
+img.formulaInl, img.inline {
+	vertical-align: middle;
+}
+
+div.center {
+	text-align: center;
+        margin-top: 0px;
+        margin-bottom: 0px;
+        padding: 0px;
+}
+
+div.center img {
+	border: 0px;
+}
+
+address.footer {
+	text-align: right;
+	padding-right: 12px;
+}
+
+img.footer {
+	border: 0px;
+	vertical-align: middle;
+}
+
+.compoundTemplParams {
+	color: #4665A2;
+	font-size: 80%;
+	line-height: 120%;
+}
+
+/* @group Code Colorization */
+
+span.keyword {
+	color: #008000
+}
+
+span.keywordtype {
+	color: #604020
+}
+
+span.keywordflow {
+	color: #e08000
+}
+
+span.comment {
+	color: #800000
+}
+
+span.preprocessor {
+	color: #806020
+}
+
+span.stringliteral {
+	color: #002080
+}
+
+span.charliteral {
+	color: #008080
+}
+
+span.vhdldigit { 
+	color: #ff00ff 
+}
+
+span.vhdlchar { 
+	color: #000000 
+}
+
+span.vhdlkeyword { 
+	color: #700070 
+}
+
+span.vhdllogic { 
+	color: #ff0000 
+}
+
+blockquote {
+        background-color: #F7F8FB;
+        border-left: 2px solid #9CAFD4;
+        margin: 0 24px 0 4px;
+        padding: 0 12px 0 16px;
+}
+
+blockquote.DocNodeRTL {
+   border-left: 0;
+   border-right: 2px solid #9CAFD4;
+   margin: 0 4px 0 24px;
+   padding: 0 16px 0 12px;
+}
+
+/* @end */
+
+/*
+.search {
+	color: #003399;
+	font-weight: bold;
+}
+
+form.search {
+	margin-bottom: 0px;
+	margin-top: 0px;
+}
+
+input.search {
+	font-size: 75%;
+	color: #000080;
+	font-weight: normal;
+	background-color: #e8eef2;
+}
+*/
+
+td.tiny {
+	font-size: 75%;
+}
+
+.dirtab {
+	padding: 4px;
+	border-collapse: collapse;
+	border: 1px solid #A3B4D7;
+}
+
+th.dirtab {
+	background: #EBEFF6;
+	font-weight: bold;
+}
+
+hr {
+	height: 0px;
+	border: none;
+	border-top: 1px solid #4A6AAA;
+}
+
+hr.footer {
+	height: 1px;
+}
+
+/* @group Member Descriptions */
+
+table.memberdecls {
+	border-spacing: 0px;
+	padding: 0px;
+}
+
+.memberdecls td, .fieldtable tr {
+	-webkit-transition-property: background-color, box-shadow;
+	-webkit-transition-duration: 0.5s;
+	-moz-transition-property: background-color, box-shadow;
+	-moz-transition-duration: 0.5s;
+	-ms-transition-property: background-color, box-shadow;
+	-ms-transition-duration: 0.5s;
+	-o-transition-property: background-color, box-shadow;
+	-o-transition-duration: 0.5s;
+	transition-property: background-color, box-shadow;
+	transition-duration: 0.5s;
+}
+
+.memberdecls td.glow, .fieldtable tr.glow {
+	background-color: cyan;
+	box-shadow: 0 0 15px cyan;
+}
+
+.mdescLeft, .mdescRight,
+.memItemLeft, .memItemRight,
+.memTemplItemLeft, .memTemplItemRight, .memTemplParams {
+	background-color: #F9FAFC;
+	border: none;
+	margin: 4px;
+	padding: 1px 0 0 8px;
+}
+
+.mdescLeft, .mdescRight {
+	padding: 0px 8px 4px 8px;
+	color: #555;
+}
+
+.memSeparator {
+        border-bottom: 1px solid #DEE4F0;
+        line-height: 1px;
+        margin: 0px;
+        padding: 0px;
+}
+
+.memItemLeft, .memTemplItemLeft {
+        white-space: nowrap;
+}
+
+.memItemRight, .memTemplItemRight {
+	width: 100%;
+}
+
+.memTemplParams {
+	color: #4665A2;
+        white-space: nowrap;
+	font-size: 80%;
+}
+
+/* @end */
+
+/* @group Member Details */
+
+/* Styles for detailed member documentation */
+
+.memtitle {
+	padding: 8px;
+	border-top: 1px solid #A8B8D9;
+	border-left: 1px solid #A8B8D9;
+	border-right: 1px solid #A8B8D9;
+	border-top-right-radius: 4px;
+	border-top-left-radius: 4px;
+	margin-bottom: -1px;
+	background-image: url('nav_f.png');
+	background-repeat: repeat-x;
+	background-color: #E2E8F2;
+	line-height: 1.25;
+	font-weight: 300;
+	float:left;
+}
+
+.permalink
+{
+        font-size: 65%;
+        display: inline-block;
+        vertical-align: middle;
+}
+
+.memtemplate {
+	font-size: 80%;
+	color: #4665A2;
+	font-weight: normal;
+	margin-left: 9px;
+}
+
+.memnav {
+	background-color: #EBEFF6;
+	border: 1px solid #A3B4D7;
+	text-align: center;
+	margin: 2px;
+	margin-right: 15px;
+	padding: 2px;
+}
+
+.mempage {
+	width: 100%;
+}
+
+.memitem {
+	padding: 0;
+	margin-bottom: 10px;
+	margin-right: 5px;
+        -webkit-transition: box-shadow 0.5s linear;
+        -moz-transition: box-shadow 0.5s linear;
+        -ms-transition: box-shadow 0.5s linear;
+        -o-transition: box-shadow 0.5s linear;
+        transition: box-shadow 0.5s linear;
+        display: table !important;
+        width: 100%;
+}
+
+.memitem.glow {
+         box-shadow: 0 0 15px cyan;
+}
+
+.memname {
+        font-weight: 400;
+        margin-left: 6px;
+}
+
+.memname td {
+	vertical-align: bottom;
+}
+
+.memproto, dl.reflist dt {
+        border-top: 1px solid #A8B8D9;
+        border-left: 1px solid #A8B8D9;
+        border-right: 1px solid #A8B8D9;
+        padding: 6px 0px 6px 0px;
+        color: #253555;
+        font-weight: bold;
+        text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9);
+        background-color: #DFE5F1;
+        /* opera specific markup */
+        box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        border-top-right-radius: 4px;
+        /* firefox specific markup */
+        -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px;
+        -moz-border-radius-topright: 4px;
+        /* webkit specific markup */
+        -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        -webkit-border-top-right-radius: 4px;
+
+}
+
+.overload {
+        font-family: "courier new",courier,monospace;
+	font-size: 65%;
+}
+
+.memdoc, dl.reflist dd {
+        border-bottom: 1px solid #A8B8D9;      
+        border-left: 1px solid #A8B8D9;      
+        border-right: 1px solid #A8B8D9; 
+        padding: 6px 10px 2px 10px;
+        background-color: #FBFCFD;
+        border-top-width: 0;
+        background-image:url('nav_g.png');
+        background-repeat:repeat-x;
+        background-color: #FFFFFF;
+        /* opera specific markup */
+        border-bottom-left-radius: 4px;
+        border-bottom-right-radius: 4px;
+        box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        /* firefox specific markup */
+        -moz-border-radius-bottomleft: 4px;
+        -moz-border-radius-bottomright: 4px;
+        -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px;
+        /* webkit specific markup */
+        -webkit-border-bottom-left-radius: 4px;
+        -webkit-border-bottom-right-radius: 4px;
+        -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+}
+
+dl.reflist dt {
+        padding: 5px;
+}
+
+dl.reflist dd {
+        margin: 0px 0px 10px 0px;
+        padding: 5px;
+}
+
+.paramkey {
+	text-align: right;
+}
+
+.paramtype {
+	white-space: nowrap;
+}
+
+.paramname {
+	color: #602020;
+	white-space: nowrap;
+}
+.paramname em {
+	font-style: normal;
+}
+.paramname code {
+        line-height: 14px;
+}
+
+.params, .retval, .exception, .tparams {
+        margin-left: 0px;
+        padding-left: 0px;
+}       
+
+.params .paramname, .retval .paramname, .tparams .paramname, .exception .paramname {
+        font-weight: bold;
+        vertical-align: top;
+}
+        
+.params .paramtype, .tparams .paramtype {
+        font-style: italic;
+        vertical-align: top;
+}       
+        
+.params .paramdir, .tparams .paramdir {
+        font-family: "courier new",courier,monospace;
+        vertical-align: top;
+}
+
+table.mlabels {
+	border-spacing: 0px;
+}
+
+td.mlabels-left {
+	width: 100%;
+	padding: 0px;
+}
+
+td.mlabels-right {
+	vertical-align: bottom;
+	padding: 0px;
+	white-space: nowrap;
+}
+
+span.mlabels {
+        margin-left: 8px;
+}
+
+span.mlabel {
+        background-color: #728DC1;
+        border-top:1px solid #5373B4;
+        border-left:1px solid #5373B4;
+        border-right:1px solid #C4CFE5;
+        border-bottom:1px solid #C4CFE5;
+	text-shadow: none;
+	color: white;
+	margin-right: 4px;
+	padding: 2px 3px;
+	border-radius: 3px;
+	font-size: 7pt;
+	white-space: nowrap;
+	vertical-align: middle;
+}
+
+
+
+/* @end */
+
+/* these are for tree view inside a (index) page */
+
+div.directory {
+        margin: 10px 0px;
+        border-top: 1px solid #9CAFD4;
+        border-bottom: 1px solid #9CAFD4;
+        width: 100%;
+}
+
+.directory table {
+        border-collapse:collapse;
+}
+
+.directory td {
+        margin: 0px;
+        padding: 0px;
+	vertical-align: top;
+}
+
+.directory td.entry {
+        white-space: nowrap;
+        padding-right: 6px;
+	padding-top: 3px;
+}
+
+.directory td.entry a {
+        outline:none;
+}
+
+.directory td.entry a img {
+        border: none;
+}
+
+.directory td.desc {
+        width: 100%;
+        padding-left: 6px;
+	padding-right: 6px;
+	padding-top: 3px;
+	border-left: 1px solid rgba(0,0,0,0.05);
+}
+
+.directory tr.even {
+	padding-left: 6px;
+	background-color: #F7F8FB;
+}
+
+.directory img {
+	vertical-align: -30%;
+}
+
+.directory .levels {
+        white-space: nowrap;
+        width: 100%;
+        text-align: right;
+        font-size: 9pt;
+}
+
+.directory .levels span {
+        cursor: pointer;
+        padding-left: 2px;
+        padding-right: 2px;
+	color: #3D578C;
+}
+
+.arrow {
+    color: #9CAFD4;
+    -webkit-user-select: none;
+    -khtml-user-select: none;
+    -moz-user-select: none;
+    -ms-user-select: none;
+    user-select: none;
+    cursor: pointer;
+    font-size: 80%;
+    display: inline-block;
+    width: 16px;
+    height: 22px;
+}
+
+.icon {
+    font-family: Arial, Helvetica;
+    font-weight: bold;
+    font-size: 12px;
+    height: 14px;
+    width: 16px;
+    display: inline-block;
+    background-color: #728DC1;
+    color: white;
+    text-align: center;
+    border-radius: 4px;
+    margin-left: 2px;
+    margin-right: 2px;
+}
+
+.icona {
+    width: 24px;
+    height: 22px;
+    display: inline-block;
+}
+
+.iconfopen {
+    width: 24px;
+    height: 18px;
+    margin-bottom: 4px;
+    background-image:url('folderopen.png');
+    background-position: 0px -4px;
+    background-repeat: repeat-y;
+    vertical-align:top;
+    display: inline-block;
+}
+
+.iconfclosed {
+    width: 24px;
+    height: 18px;
+    margin-bottom: 4px;
+    background-image:url('folderclosed.png');
+    background-position: 0px -4px;
+    background-repeat: repeat-y;
+    vertical-align:top;
+    display: inline-block;
+}
+
+.icondoc {
+    width: 24px;
+    height: 18px;
+    margin-bottom: 4px;
+    background-image:url('doc.png');
+    background-position: 0px -4px;
+    background-repeat: repeat-y;
+    vertical-align:top;
+    display: inline-block;
+}
+
+table.directory {
+    font: 400 14px Roboto,sans-serif;
+}
+
+/* @end */
+
+div.dynheader {
+        margin-top: 8px;
+	-webkit-touch-callout: none;
+	-webkit-user-select: none;
+	-khtml-user-select: none;
+	-moz-user-select: none;
+	-ms-user-select: none;
+	user-select: none;
+}
+
+address {
+	font-style: normal;
+	color: #2A3D61;
+}
+
+table.doxtable caption {
+	caption-side: top;
+}
+
+table.doxtable {
+	border-collapse:collapse;
+        margin-top: 4px;
+        margin-bottom: 4px;
+}
+
+table.doxtable td, table.doxtable th {
+	border: 1px solid #2D4068;
+	padding: 3px 7px 2px;
+}
+
+table.doxtable th {
+	background-color: #374F7F;
+	color: #FFFFFF;
+	font-size: 110%;
+	padding-bottom: 4px;
+	padding-top: 5px;
+}
+
+table.fieldtable {
+        /*width: 100%;*/
+        margin-bottom: 10px;
+        border: 1px solid #A8B8D9;
+        border-spacing: 0px;
+        -moz-border-radius: 4px;
+        -webkit-border-radius: 4px;
+        border-radius: 4px;
+        -moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px;
+        -webkit-box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15);
+        box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15);
+}
+
+.fieldtable td, .fieldtable th {
+        padding: 3px 7px 2px;
+}
+
+.fieldtable td.fieldtype, .fieldtable td.fieldname {
+        white-space: nowrap;
+        border-right: 1px solid #A8B8D9;
+        border-bottom: 1px solid #A8B8D9;
+        vertical-align: top;
+}
+
+.fieldtable td.fieldname {
+        padding-top: 3px;
+}
+
+.fieldtable td.fielddoc {
+        border-bottom: 1px solid #A8B8D9;
+        /*width: 100%;*/
+}
+
+.fieldtable td.fielddoc p:first-child {
+        margin-top: 0px;
+}       
+        
+.fieldtable td.fielddoc p:last-child {
+        margin-bottom: 2px;
+}
+
+.fieldtable tr:last-child td {
+        border-bottom: none;
+}
+
+.fieldtable th {
+        background-image:url('nav_f.png');
+        background-repeat:repeat-x;
+        background-color: #E2E8F2;
+        font-size: 90%;
+        color: #253555;
+        padding-bottom: 4px;
+        padding-top: 5px;
+        text-align:left;
+        font-weight: 400;
+        -moz-border-radius-topleft: 4px;
+        -moz-border-radius-topright: 4px;
+        -webkit-border-top-left-radius: 4px;
+        -webkit-border-top-right-radius: 4px;
+        border-top-left-radius: 4px;
+        border-top-right-radius: 4px;
+        border-bottom: 1px solid #A8B8D9;
+}
+
+
+.tabsearch {
+	top: 0px;
+	left: 10px;
+	height: 36px;
+	background-image: url('tab_b.png');
+	z-index: 101;
+	overflow: hidden;
+	font-size: 13px;
+}
+
+.navpath ul
+{
+	font-size: 11px;
+	background-image:url('tab_b.png');
+	background-repeat:repeat-x;
+	background-position: 0 -5px;
+	height:30px;
+	line-height:30px;
+	color:#8AA0CC;
+	border:solid 1px #C2CDE4;
+	overflow:hidden;
+	margin:0px;
+	padding:0px;
+}
+
+.navpath li
+{
+	list-style-type:none;
+	float:left;
+	padding-left:10px;
+	padding-right:15px;
+	background-image:url('bc_s.png');
+	background-repeat:no-repeat;
+	background-position:right;
+	color:#364D7C;
+}
+
+.navpath li.navelem a
+{
+	height:32px;
+	display:block;
+	text-decoration: none;
+	outline: none;
+	color: #283A5D;
+	font-family: 'Lucida Grande',Geneva,Helvetica,Arial,sans-serif;
+	text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9);
+	text-decoration: none;        
+}
+
+.navpath li.navelem a:hover
+{
+	color:#6884BD;
+}
+
+.navpath li.footer
+{
+        list-style-type:none;
+        float:right;
+        padding-left:10px;
+        padding-right:15px;
+        background-image:none;
+        background-repeat:no-repeat;
+        background-position:right;
+        color:#364D7C;
+        font-size: 8pt;
+}
+
+
+div.summary
+{
+	float: right;
+	font-size: 8pt;
+	padding-right: 5px;
+	width: 50%;
+	text-align: right;
+}       
+
+div.summary a
+{
+	white-space: nowrap;
+}
+
+table.classindex
+{
+        margin: 10px;
+        white-space: nowrap;
+        margin-left: 3%;
+        margin-right: 3%;
+        width: 94%;
+        border: 0;
+        border-spacing: 0; 
+        padding: 0;
+}
+
+div.ingroups
+{
+	font-size: 8pt;
+	width: 50%;
+	text-align: left;
+}
+
+div.ingroups a
+{
+	white-space: nowrap;
+}
+
+div.header
+{
+        background-image:url('nav_h.png');
+        background-repeat:repeat-x;
+	background-color: #F9FAFC;
+	margin:  0px;
+	border-bottom: 1px solid #C4CFE5;
+}
+
+div.headertitle
+{
+	padding: 5px 5px 5px 10px;
+}
+
+.PageDocRTL-title div.headertitle {
+  text-align: right;
+  direction: rtl;
+}
+
+dl {
+        padding: 0 0 0 0;
+}
+
+/* dl.note, dl.warning, dl.attention, dl.pre, dl.post, dl.invariant, dl.deprecated, dl.todo, dl.test, dl.bug, dl.examples */
+dl.section {
+	margin-left: 0px;
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+}
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+}
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+}
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+}
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+	padding-bottom: 4px;
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+}
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+}
+
+table.DocNodeLTR {
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+}
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+}
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+{
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+}
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new file mode 100644
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diff --git a/docs/html/dynsections.js b/docs/html/dynsections.js
new file mode 100644
index 0000000..3174bd7
--- /dev/null
+++ b/docs/html/dynsections.js
@@ -0,0 +1,121 @@
+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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+
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+</ul>
+
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+</ul>
+
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+</ul>
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+<h3><a id="index_s" name="index_s"></a>- s -</h3><ul>
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+</ul>
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+<h3><a id="index_u" name="index_u"></a>- u -</h3><ul>
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+<!-- HTML footer for doxygen 1.10.0-->
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+<script type="text/javascript" src="search/search.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="doxygen-awesome.css" rel="stylesheet" type="text/css"/>
+<link href="doxygen-awesome-sidebar-only.css" rel="stylesheet" type="text/css"/>
+<link href="doxygen-awesome-sidebar-only-darkmode-toggle.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<!-- https://tholman.com/github-corners/ -->
+<a href="https://github.com/jothepro/doxygen-awesome-css" class="github-corner" title="View source on GitHub" target="_blank" rel="noopener noreferrer">
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+    <path d="M0,0 L115,115 L130,115 L142,142 L250,250 L250,0 Z"></path><path d="M128.3,109.0 C113.8,99.7 119.0,89.6 119.0,89.6 C122.0,82.7 120.5,78.6 120.5,78.6 C119.2,72.0 123.4,76.3 123.4,76.3 C127.3,80.9 125.5,87.3 125.5,87.3 C122.9,97.6 130.6,101.9 134.4,103.2" fill="currentColor" style="transform-origin: 130px 106px;" class="octo-arm"></path><path d="M115.0,115.0 C114.9,115.1 118.7,116.5 119.8,115.4 L133.7,101.6 C136.9,99.2 139.9,98.4 142.2,98.6 C133.8,88.0 127.5,74.4 143.8,58.0 C148.5,53.4 154.0,51.2 159.7,51.0 C160.3,49.4 163.2,43.6 171.4,40.1 C171.4,40.1 176.1,42.5 178.8,56.2 C183.1,58.6 187.2,61.8 190.9,65.4 C194.5,69.0 197.7,73.2 200.1,77.6 C213.8,80.2 216.3,84.9 216.3,84.9 C212.7,93.1 206.9,96.0 205.4,96.6 C205.1,102.4 203.0,107.8 198.3,112.5 C181.9,128.9 168.3,122.5 157.7,114.1 C157.9,116.9 156.7,120.9 152.7,124.9 L141.0,136.5 C139.8,137.7 141.6,141.9 141.8,141.8 Z" fill="currentColor" class="octo-body"></path></svg></a><style>.github-corner:hover .octo-arm{animation:octocat-wave 560ms ease-in-out}@keyframes octocat-wave{0%,100%{transform:rotate(0)}20%,60%{transform:rotate(-25deg)}40%,80%{transform:rotate(10deg)}}@media (max-width:500px){.github-corner:hover .octo-arm{animation:none}.github-corner .octo-arm{animation:octocat-wave 560ms ease-in-out}}</style>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr style="height: 56px;">
+  <td id="projectalign" style="padding-left: 0.5em;">
+   <div id="projectname">penify-cli
+   </div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part --><!-- Generated by Doxygen 1.9.4 -->
+<script type="text/javascript">
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+var searchBox = new SearchBox("searchBox", "search",'Search','.html');
+/* @license-end */
+</script>
+<script type="text/javascript" src="menudata.js"></script>
+<script type="text/javascript" src="menu.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  $(document).ready(function() { init_search(); });
+});
+/* @license-end */
+</script>
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+</div><!-- top -->
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+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(document).ready(function(){initNavTree('functions_func.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
+     onkeydown="return searchBox.OnSearchSelectKey(event)">
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+
+<!-- iframe showing the search results (closed by default) -->
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+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div class="contents">
+&#160;
+
+<h3><a id="index__5F" name="index__5F"></a>- _ -</h3><ul>
+<li>__init__()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ad9cb741a8baf2d13f845e25a36311086">penify_hook.api_client.APIClient</a>, <a class="el" href="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.html#ab1296a3d1e9070d891801876b66f7344">penify_hook.base_analyzer.BaseAnalyzer</a>, <a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#af127d86729e226d74dbeb095b008db3e">penify_hook.commit_analyzer.CommitDocGenHook</a>, <a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a190c473090b2a07e7cb43073a3211c4b">penify_hook.file_analyzer.FileAnalyzerGenHook</a>, <a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a1bb0358140931d82c7616f12efe31821">penify_hook.folder_analyzer.FolderAnalyzerGenHook</a>, <a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a92275fddb43dbef6dfdb6c1ed6e96d0c">penify_hook.git_analyzer.GitDocGenHook</a>, <a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a47efc1ec07389c960f2dfb37ba8c09f5">penify_hook.jira_client.JiraClient</a>, <a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#a76d92354f585ab4bb291169f9f530764">penify_hook.llm_client.LLMClient</a></li>
+<li>_amend_commit()&#160;:&#160;<a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#ac999c5cbc852a7ec3b412ccb43c274ca">penify_hook.commit_analyzer.CommitDocGenHook</a></li>
+</ul>
+
+
+<h3><a id="index_a" name="index_a"></a>- a -</h3><ul>
+<li>add_comment()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aa1f374116c64cd5f1492ec7f7e40f9c1">penify_hook.jira_client.JiraClient</a></li>
+</ul>
+
+
+<h3><a id="index_e" name="index_e"></a>- e -</h3><ul>
+<li>enhance_commit_message()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a70d2c5a6432aa6f238da0ff65d49a760">penify_hook.jira_client.JiraClient</a></li>
+<li>extract_issue_keys()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#ad2823ad1d3baaedd38039913c3a97fd7">penify_hook.jira_client.JiraClient</a></li>
+<li>extract_issue_keys_from_branch()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a093d6456fe053ef7a7862d5d6851910c">penify_hook.jira_client.JiraClient</a></li>
+</ul>
+
+
+<h3><a id="index_f" name="index_f"></a>- f -</h3><ul>
+<li>format_commit_message_with_jira_info()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a49ea1149758f7f5212149d357b13cc23">penify_hook.jira_client.JiraClient</a></li>
+</ul>
+
+
+<h3><a id="index_g" name="index_g"></a>- g -</h3><ul>
+<li>generate_commit_summary()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a7ff74798e7d428b4e2f20095287eb2ce">penify_hook.api_client.APIClient</a>, <a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#a2ad3014dac466ee1d8e00306d0cf2000">penify_hook.llm_client.LLMClient</a></li>
+<li>generate_commit_summary_with_llm()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ac0ada470b897935f9fb372cd0e7e51e3">penify_hook.api_client.APIClient</a></li>
+<li>get_api_key()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ad15b790608e703c8c122aa2ead7dfa99">penify_hook.api_client.APIClient</a></li>
+<li>get_commit_context_from_issues()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#afb41ce6f13c30b1265d439ddf04bf2cd">penify_hook.jira_client.JiraClient</a></li>
+<li>get_detailed_issue_context()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aa967169a4b7970c67c0947b9ac56f746">penify_hook.jira_client.JiraClient</a></li>
+<li>get_issue_details()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a65f6924819084b7c8d268956a784804a">penify_hook.jira_client.JiraClient</a></li>
+<li>get_modified_files_in_last_commit()&#160;:&#160;<a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a17549766100e91eb94b5f1a1d34bf481">penify_hook.git_analyzer.GitDocGenHook</a></li>
+<li>get_modified_lines()&#160;:&#160;<a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a974d2f51315ed6a1965a7fd7e2ced0cd">penify_hook.git_analyzer.GitDocGenHook</a></li>
+<li>get_summary()&#160;:&#160;<a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a8496194276441fa2eb2fa014eaab9a37">penify_hook.commit_analyzer.CommitDocGenHook</a></li>
+<li>get_supported_file_types()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#a5d2b4a26b24352d951ea79ecc4ff3402">penify_hook.api_client.APIClient</a></li>
+</ul>
+
+
+<h3><a id="index_i" name="index_i"></a>- i -</h3><ul>
+<li>is_connected()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#a00d0f9ae006313a21576362d26ac5ec8">penify_hook.jira_client.JiraClient</a></li>
+</ul>
+
+
+<h3><a id="index_l" name="index_l"></a>- l -</h3><ul>
+<li>list_all_files_in_dir()&#160;:&#160;<a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#a70b845318fc7ac3b607daf26378e19ec">penify_hook.folder_analyzer.FolderAnalyzerGenHook</a></li>
+<li>litellm()&#160;:&#160;<a class="el" href="classpenify__hook_1_1llm__client_1_1LLMClient.html#ad6f06658ca922793f879474f2234518e">penify_hook.llm_client.LLMClient</a></li>
+</ul>
+
+
+<h3><a id="index_m" name="index_m"></a>- m -</h3><ul>
+<li>mock_api_client()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#abcd2354a2af4afe19e57877628d3acc2">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>mock_commit_doc_gen()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#aa9b25a4bf692b8736164695072a398f6">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>mock_git_folder_search()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a2842f456a8c0f1bf0f4def17c183c04e">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>mock_jira_client()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a05adaa9a713ff1be657455d0667bc6be">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>mock_llm_client()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a20e78370ff5bd6223cc1dd4323a86ea4">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>mock_print_functions()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#afafbae3c9aeb0e50a75996256c02c8be">tests.test_commit_commands.TestCommitCommands</a></li>
+</ul>
+
+
+<h3><a id="index_p" name="index_p"></a>- p -</h3><ul>
+<li>print_processing()&#160;:&#160;<a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a6ab39391dfb7686f2a2d21a702dd3073">penify_hook.file_analyzer.FileAnalyzerGenHook</a></li>
+<li>process_file()&#160;:&#160;<a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a2cc6c22ef588fccf3eed9bbc57fb6d6e">penify_hook.file_analyzer.FileAnalyzerGenHook</a>, <a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a05313caa22b173ce75638f0db08eeb85">penify_hook.git_analyzer.GitDocGenHook</a></li>
+<li>process_jira_integration()&#160;:&#160;<a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#adda13cc121d96342476ccf72b63a007f">penify_hook.commit_analyzer.CommitDocGenHook</a></li>
+</ul>
+
+
+<h3><a id="index_r" name="index_r"></a>- r -</h3><ul>
+<li>run()&#160;:&#160;<a class="el" href="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.html#a6370a03f7ed9175ef6f81e931a105ea9">penify_hook.commit_analyzer.CommitDocGenHook</a>, <a class="el" href="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.html#a4f4dffbc432fac3e259d957dd1e187f1">penify_hook.file_analyzer.FileAnalyzerGenHook</a>, <a class="el" href="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.html#afd189d1b8c773bf710a899eb21fd76cc">penify_hook.folder_analyzer.FolderAnalyzerGenHook</a>, <a class="el" href="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.html#a3beba14e92d717391a74bb70b1fab0ae">penify_hook.git_analyzer.GitDocGenHook</a></li>
+</ul>
+
+
+<h3><a id="index_s" name="index_s"></a>- s -</h3><ul>
+<li>send_file_for_docstring_generation()&#160;:&#160;<a class="el" href="classpenify__hook_1_1api__client_1_1APIClient.html#ac5aad61508c2cafdf6e88e6c7d6c82b3">penify_hook.api_client.APIClient</a></li>
+</ul>
+
+
+<h3><a id="index_t" name="index_t"></a>- t -</h3><ul>
+<li>test_commit_code_error_handling()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a43c2ff3707124aa48e8eb581106b8691">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>test_commit_code_with_jira_client()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#af9c09013055ec39ddde86b487aefcf8b">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>test_commit_code_with_jira_connection_failure()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#acea0d934ee0f2b914b0b893736e8fe4e">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>test_commit_code_with_llm_client()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#acc4b1e4189792a3f7c11d2a745f479c0">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>test_config_jira_web_server_setup()&#160;:&#160;<a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#a06e600222e426b003850509cb1d3190a">tests.test_web_config.TestWebConfig</a></li>
+<li>test_config_llm_web_server_setup()&#160;:&#160;<a class="el" href="classtests_1_1test__web__config_1_1TestWebConfig.html#afc6440352201d207ea8b4d26f8ccfa35">tests.test_web_config.TestWebConfig</a></li>
+<li>test_get_jira_config_exists()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#aee37b97432821d19758c6325d4c74bcf">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_llm_config_empty()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#abd12f028b89aa9cd1152c0b9ece5d3cd">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_llm_config_exists()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#adf9f2233a3f4cc5725b9d4f05758b167">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_llm_config_invalid_json()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a473984d31452b56acd6ce4011a1248bd">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_penify_config_existing_dir()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a2e8162082bcdd5652bb37bdb14cf453a">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_penify_config_new_dir()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a33d4760eee3b67e1cde3aed755ebb948">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_token_from_config()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a6c0207be563c3de59a6d16277805114c">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_token_from_env()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a3355f7d313bebaa71694387cf2bc5232">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_get_token_not_found()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a400ca5d9fcdc159714e8df54920f9436">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_handle_commit()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#ac13e368262340af98b30fd8ebdac6597">tests.test_commit_commands.TestCommitCommands</a></li>
+<li>test_save_jira_config_success()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#af8d62310da2d768e21770f8f01ff5375">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_save_llm_config_failure()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#a73a264dfb21e16003e095b79f6eab2ac">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_save_llm_config_success()&#160;:&#160;<a class="el" href="classtests_1_1test__config__commands_1_1TestConfigCommands.html#acd8df8219441b9e9871b903a681400d9">tests.test_config_commands.TestConfigCommands</a></li>
+<li>test_setup_commit_parser()&#160;:&#160;<a class="el" href="classtests_1_1test__commit__commands_1_1TestCommitCommands.html#a4d04b125e102190a768f65f1948f15bc">tests.test_commit_commands.TestCommitCommands</a></li>
+</ul>
+
+
+<h3><a id="index_u" name="index_u"></a>- u -</h3><ul>
+<li>update_issue_status()&#160;:&#160;<a class="el" href="classpenify__hook_1_1jira__client_1_1JiraClient.html#aca8837552d37bfd611de23441a240826">penify_hook.jira_client.JiraClient</a></li>
+</ul>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
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e||o.options.disabled!==!0&&!t(this).hasClass("ui-state-disabled")?("string"==typeof a?o[a]:a).apply(o,arguments):void 0}"string"!=typeof a&&(r.guid=a.guid=a.guid||r.guid||t.guid++);var h=s.match(/^([\w:-]*)\s*(.*)$/),l=h[1]+o.eventNamespace,c=h[2];c?n.on(l,c,r):i.on(l,r)})},_off:function(e,i){i=(i||"").split(" ").join(this.eventNamespace+" ")+this.eventNamespace,e.off(i).off(i),this.bindings=t(this.bindings.not(e).get()),this.focusable=t(this.focusable.not(e).get()),this.hoverable=t(this.hoverable.not(e).get())},_delay:function(t,e){function i(){return("string"==typeof t?s[t]:t).apply(s,arguments)}var s=this;return setTimeout(i,e||0)},_hoverable:function(e){this.hoverable=this.hoverable.add(e),this._on(e,{mouseenter:function(e){this._addClass(t(e.currentTarget),null,"ui-state-hover")},mouseleave:function(e){this._removeClass(t(e.currentTarget),null,"ui-state-hover")}})},_focusable:function(e){this.focusable=this.focusable.add(e),this._on(e,{focusin:function(e){this._addClass(t(e.currentTarget),null,"ui-state-focus")},focusout:function(e){this._removeClass(t(e.currentTarget),null,"ui-state-focus")}})},_trigger:function(e,i,s){var n,o,a=this.options[e];if(s=s||{},i=t.Event(i),i.type=(e===this.widgetEventPrefix?e:this.widgetEventPrefix+e).toLowerCase(),i.target=this.element[0],o=i.originalEvent)for(n in o)n in i||(i[n]=o[n]);return this.element.trigger(i,s),!(t.isFunction(a)&&a.apply(this.element[0],[i].concat(s))===!1||i.isDefaultPrevented())}},t.each({show:"fadeIn",hide:"fadeOut"},function(e,i){t.Widget.prototype["_"+e]=function(s,n,o){"string"==typeof n&&(n={effect:n});var a,r=n?n===!0||"number"==typeof n?i:n.effect||i:e;n=n||{},"number"==typeof n&&(n={duration:n}),a=!t.isEmptyObject(n),n.complete=o,n.delay&&s.delay(n.delay),a&&t.effects&&t.effects.effect[r]?s[e](n):r!==e&&s[r]?s[r](n.duration,n.easing,o):s.queue(function(i){t(this)[e](),o&&o.call(s[0]),i()})}}),t.widget,function(){function e(t,e,i){return[parseFloat(t[0])*(u.test(t[0])?e/100:1),parseFloat(t[1])*(u.test(t[1])?i/100:1)]}function i(e,i){return parseInt(t.css(e,i),10)||0}function s(e){var i=e[0];return 9===i.nodeType?{width:e.width(),height:e.height(),offset:{top:0,left:0}}:t.isWindow(i)?{width:e.width(),height:e.height(),offset:{top:e.scrollTop(),left:e.scrollLeft()}}:i.preventDefault?{width:0,height:0,offset:{top:i.pageY,left:i.pageX}}:{width:e.outerWidth(),height:e.outerHeight(),offset:e.offset()}}var n,o=Math.max,a=Math.abs,r=/left|center|right/,h=/top|center|bottom/,l=/[\+\-]\d+(\.[\d]+)?%?/,c=/^\w+/,u=/%$/,d=t.fn.position;t.position={scrollbarWidth:function(){if(void 0!==n)return n;var e,i,s=t("<div style='display:block;position:absolute;width:50px;height:50px;overflow:hidden;'><div style='height:100px;width:auto;'></div></div>"),o=s.children()[0];return t("body").append(s),e=o.offsetWidth,s.css("overflow","scroll"),i=o.offsetWidth,e===i&&(i=s[0].clientWidth),s.remove(),n=e-i},getScrollInfo:function(e){var i=e.isWindow||e.isDocument?"":e.element.css("overflow-x"),s=e.isWindow||e.isDocument?"":e.element.css("overflow-y"),n="scroll"===i||"auto"===i&&e.width<e.element[0].scrollWidth,o="scroll"===s||"auto"===s&&e.height<e.element[0].scrollHeight;return{width:o?t.position.scrollbarWidth():0,height:n?t.position.scrollbarWidth():0}},getWithinInfo:function(e){var i=t(e||window),s=t.isWindow(i[0]),n=!!i[0]&&9===i[0].nodeType,o=!s&&!n;return{element:i,isWindow:s,isDocument:n,offset:o?t(e).offset():{left:0,top:0},scrollLeft:i.scrollLeft(),scrollTop:i.scrollTop(),width:i.outerWidth(),height:i.outerHeight()}}},t.fn.position=function(n){if(!n||!n.of)return d.apply(this,arguments);n=t.extend({},n);var u,p,f,m,g,_,v=t(n.of),b=t.position.getWithinInfo(n.within),y=t.position.getScrollInfo(b),w=(n.collision||"flip").split(" "),x={};return _=s(v),v[0].preventDefault&&(n.at="left top"),p=_.width,f=_.height,m=_.offset,g=t.extend({},m),t.each(["my","at"],function(){var t,e,i=(n[this]||"").split(" ");1===i.length&&(i=r.test(i[0])?i.concat(["center"]):h.test(i[0])?["center"].concat(i):["center","center"]),i[0]=r.test(i[0])?i[0]:"center",i[1]=h.test(i[1])?i[1]:"center",t=l.exec(i[0]),e=l.exec(i[1]),x[this]=[t?t[0]:0,e?e[0]:0],n[this]=[c.exec(i[0])[0],c.exec(i[1])[0]]}),1===w.length&&(w[1]=w[0]),"right"===n.at[0]?g.left+=p:"center"===n.at[0]&&(g.left+=p/2),"bottom"===n.at[1]?g.top+=f:"center"===n.at[1]&&(g.top+=f/2),u=e(x.at,p,f),g.left+=u[0],g.top+=u[1],this.each(function(){var s,r,h=t(this),l=h.outerWidth(),c=h.outerHeight(),d=i(this,"marginLeft"),_=i(this,"marginTop"),k=l+d+i(this,"marginRight")+y.width,C=c+_+i(this,"marginBottom")+y.height,D=t.extend({},g),T=e(x.my,h.outerWidth(),h.outerHeight());"right"===n.my[0]?D.left-=l:"center"===n.my[0]&&(D.left-=l/2),"bottom"===n.my[1]?D.top-=c:"center"===n.my[1]&&(D.top-=c/2),D.left+=T[0],D.top+=T[1],s={marginLeft:d,marginTop:_},t.each(["left","top"],function(e,i){t.ui.position[w[e]]&&t.ui.position[w[e]][i](D,{targetWidth:p,targetHeight:f,elemWidth:l,elemHeight:c,collisionPosition:s,collisionWidth:k,collisionHeight:C,offset:[u[0]+T[0],u[1]+T[1]],my:n.my,at:n.at,within:b,elem:h})}),n.using&&(r=function(t){var e=m.left-D.left,i=e+p-l,s=m.top-D.top,r=s+f-c,u={target:{element:v,left:m.left,top:m.top,width:p,height:f},element:{element:h,left:D.left,top:D.top,width:l,height:c},horizontal:0>i?"left":e>0?"right":"center",vertical:0>r?"top":s>0?"bottom":"middle"};l>p&&p>a(e+i)&&(u.horizontal="center"),c>f&&f>a(s+r)&&(u.vertical="middle"),u.important=o(a(e),a(i))>o(a(s),a(r))?"horizontal":"vertical",n.using.call(this,t,u)}),h.offset(t.extend(D,{using:r}))})},t.ui.position={fit:{left:function(t,e){var i,s=e.within,n=s.isWindow?s.scrollLeft:s.offset.left,a=s.width,r=t.left-e.collisionPosition.marginLeft,h=n-r,l=r+e.collisionWidth-a-n;e.collisionWidth>a?h>0&&0>=l?(i=t.left+h+e.collisionWidth-a-n,t.left+=h-i):t.left=l>0&&0>=h?n:h>l?n+a-e.collisionWidth:n:h>0?t.left+=h:l>0?t.left-=l:t.left=o(t.left-r,t.left)},top:function(t,e){var i,s=e.within,n=s.isWindow?s.scrollTop:s.offset.top,a=e.within.height,r=t.top-e.collisionPosition.marginTop,h=n-r,l=r+e.collisionHeight-a-n;e.collisionHeight>a?h>0&&0>=l?(i=t.top+h+e.collisionHeight-a-n,t.top+=h-i):t.top=l>0&&0>=h?n:h>l?n+a-e.collisionHeight:n:h>0?t.top+=h:l>0?t.top-=l:t.top=o(t.top-r,t.top)}},flip:{left:function(t,e){var i,s,n=e.within,o=n.offset.left+n.scrollLeft,r=n.width,h=n.isWindow?n.scrollLeft:n.offset.left,l=t.left-e.collisionPosition.marginLeft,c=l-h,u=l+e.collisionWidth-r-h,d="left"===e.my[0]?-e.elemWidth:"right"===e.my[0]?e.elemWidth:0,p="left"===e.at[0]?e.targetWidth:"right"===e.at[0]?-e.targetWidth:0,f=-2*e.offset[0];0>c?(i=t.left+d+p+f+e.collisionWidth-r-o,(0>i||a(c)>i)&&(t.left+=d+p+f)):u>0&&(s=t.left-e.collisionPosition.marginLeft+d+p+f-h,(s>0||u>a(s))&&(t.left+=d+p+f))},top:function(t,e){var i,s,n=e.within,o=n.offset.top+n.scrollTop,r=n.height,h=n.isWindow?n.scrollTop:n.offset.top,l=t.top-e.collisionPosition.marginTop,c=l-h,u=l+e.collisionHeight-r-h,d="top"===e.my[1],p=d?-e.elemHeight:"bottom"===e.my[1]?e.elemHeight:0,f="top"===e.at[1]?e.targetHeight:"bottom"===e.at[1]?-e.targetHeight:0,m=-2*e.offset[1];0>c?(s=t.top+p+f+m+e.collisionHeight-r-o,(0>s||a(c)>s)&&(t.top+=p+f+m)):u>0&&(i=t.top-e.collisionPosition.marginTop+p+f+m-h,(i>0||u>a(i))&&(t.top+=p+f+m))}},flipfit:{left:function(){t.ui.position.flip.left.apply(this,arguments),t.ui.position.fit.left.apply(this,arguments)},top:function(){t.ui.position.flip.top.apply(this,arguments),t.ui.position.fit.top.apply(this,arguments)}}}}(),t.ui.position,t.extend(t.expr[":"],{data:t.expr.createPseudo?t.expr.createPseudo(function(e){return function(i){return!!t.data(i,e)}}):function(e,i,s){return!!t.data(e,s[3])}}),t.fn.extend({disableSelection:function(){var t="onselectstart"in 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i=e.data("ui-form-reset-instances");t.each(i,function(){this.refresh()})})},_bindFormResetHandler:function(){if(this.form=this.element.form(),this.form.length){var t=this.form.data("ui-form-reset-instances")||[];t.length||this.form.on("reset.ui-form-reset",this._formResetHandler),t.push(this),this.form.data("ui-form-reset-instances",t)}},_unbindFormResetHandler:function(){if(this.form.length){var e=this.form.data("ui-form-reset-instances");e.splice(t.inArray(this,e),1),e.length?this.form.data("ui-form-reset-instances",e):this.form.removeData("ui-form-reset-instances").off("reset.ui-form-reset")}}},"1.7"===t.fn.jquery.substring(0,3)&&(t.each(["Width","Height"],function(e,i){function s(e,i,s,o){return t.each(n,function(){i-=parseFloat(t.css(e,"padding"+this))||0,s&&(i-=parseFloat(t.css(e,"border"+this+"Width"))||0),o&&(i-=parseFloat(t.css(e,"margin"+this))||0)}),i}var n="Width"===i?["Left","Right"]:["Top","Bottom"],o=i.toLowerCase(),a={innerWidth:t.fn.innerWidth,innerHeight:t.fn.innerHeight,outerWidth:t.fn.outerWidth,outerHeight:t.fn.outerHeight};t.fn["inner"+i]=function(e){return void 0===e?a["inner"+i].call(this):this.each(function(){t(this).css(o,s(this,e)+"px")})},t.fn["outer"+i]=function(e,n){return"number"!=typeof e?a["outer"+i].call(this,e):this.each(function(){t(this).css(o,s(this,e,!0,n)+"px")})}}),t.fn.addBack=function(t){return this.add(null==t?this.prevObject:this.prevObject.filter(t))}),t.ui.keyCode={BACKSPACE:8,COMMA:188,DELETE:46,DOWN:40,END:35,ENTER:13,ESCAPE:27,HOME:36,LEFT:37,PAGE_DOWN:34,PAGE_UP:33,PERIOD:190,RIGHT:39,SPACE:32,TAB:9,UP:38},t.ui.escapeSelector=function(){var t=/([!"#$%&'()*+,./:;<=>?@[\]^`{|}~])/g;return function(e){return e.replace(t,"\\$1")}}(),t.fn.labels=function(){var e,i,s,n,o;return this[0].labels&&this[0].labels.length?this.pushStack(this[0].labels):(n=this.eq(0).parents("label"),s=this.attr("id"),s&&(e=this.eq(0).parents().last(),o=e.add(e.length?e.siblings():this.siblings()),i="label[for='"+t.ui.escapeSelector(s)+"']",n=n.add(o.find(i).addBack(i))),this.pushStack(n))},t.fn.scrollParent=function(e){var i=this.css("position"),s="absolute"===i,n=e?/(auto|scroll|hidden)/:/(auto|scroll)/,o=this.parents().filter(function(){var e=t(this);return s&&"static"===e.css("position")?!1:n.test(e.css("overflow")+e.css("overflow-y")+e.css("overflow-x"))}).eq(0);return"fixed"!==i&&o.length?o:t(this[0].ownerDocument||document)},t.extend(t.expr[":"],{tabbable:function(e){var i=t.attr(e,"tabindex"),s=null!=i;return(!s||i>=0)&&t.ui.focusable(e,s)}}),t.fn.extend({uniqueId:function(){var t=0;return function(){return this.each(function(){this.id||(this.id="ui-id-"+ ++t)})}}(),removeUniqueId:function(){return this.each(function(){/^ui-id-\d+$/.test(this.id)&&t(this).removeAttr("id")})}}),t.ui.ie=!!/msie [\w.]+/.exec(navigator.userAgent.toLowerCase());var n=!1;t(document).on("mouseup",function(){n=!1}),t.widget("ui.mouse",{version:"1.12.1",options:{cancel:"input, textarea, button, select, option",distance:1,delay:0},_mouseInit:function(){var e=this;this.element.on("mousedown."+this.widgetName,function(t){return e._mouseDown(t)}).on("click."+this.widgetName,function(i){return!0===t.data(i.target,e.widgetName+".preventClickEvent")?(t.removeData(i.target,e.widgetName+".preventClickEvent"),i.stopImmediatePropagation(),!1):void 0}),this.started=!1},_mouseDestroy:function(){this.element.off("."+this.widgetName),this._mouseMoveDelegate&&this.document.off("mousemove."+this.widgetName,this._mouseMoveDelegate).off("mouseup."+this.widgetName,this._mouseUpDelegate)},_mouseDown:function(e){if(!n){this._mouseMoved=!1,this._mouseStarted&&this._mouseUp(e),this._mouseDownEvent=e;var i=this,s=1===e.which,o="string"==typeof this.options.cancel&&e.target.nodeName?t(e.target).closest(this.options.cancel).length:!1;return s&&!o&&this._mouseCapture(e)?(this.mouseDelayMet=!this.options.delay,this.mouseDelayMet||(this._mouseDelayTimer=setTimeout(function(){i.mouseDelayMet=!0},this.options.delay)),this._mouseDistanceMet(e)&&this._mouseDelayMet(e)&&(this._mouseStarted=this._mouseStart(e)!==!1,!this._mouseStarted)?(e.preventDefault(),!0):(!0===t.data(e.target,this.widgetName+".preventClickEvent")&&t.removeData(e.target,this.widgetName+".preventClickEvent"),this._mouseMoveDelegate=function(t){return i._mouseMove(t)},this._mouseUpDelegate=function(t){return i._mouseUp(t)},this.document.on("mousemove."+this.widgetName,this._mouseMoveDelegate).on("mouseup."+this.widgetName,this._mouseUpDelegate),e.preventDefault(),n=!0,!0)):!0}},_mouseMove:function(e){if(this._mouseMoved){if(t.ui.ie&&(!document.documentMode||9>document.documentMode)&&!e.button)return this._mouseUp(e);if(!e.which)if(e.originalEvent.altKey||e.originalEvent.ctrlKey||e.originalEvent.metaKey||e.originalEvent.shiftKey)this.ignoreMissingWhich=!0;else if(!this.ignoreMissingWhich)return this._mouseUp(e)}return(e.which||e.button)&&(this._mouseMoved=!0),this._mouseStarted?(this._mouseDrag(e),e.preventDefault()):(this._mouseDistanceMet(e)&&this._mouseDelayMet(e)&&(this._mouseStarted=this._mouseStart(this._mouseDownEvent,e)!==!1,this._mouseStarted?this._mouseDrag(e):this._mouseUp(e)),!this._mouseStarted)},_mouseUp:function(e){this.document.off("mousemove."+this.widgetName,this._mouseMoveDelegate).off("mouseup."+this.widgetName,this._mouseUpDelegate),this._mouseStarted&&(this._mouseStarted=!1,e.target===this._mouseDownEvent.target&&t.data(e.target,this.widgetName+".preventClickEvent",!0),this._mouseStop(e)),this._mouseDelayTimer&&(clearTimeout(this._mouseDelayTimer),delete this._mouseDelayTimer),this.ignoreMissingWhich=!1,n=!1,e.preventDefault()},_mouseDistanceMet:function(t){return Math.max(Math.abs(this._mouseDownEvent.pageX-t.pageX),Math.abs(this._mouseDownEvent.pageY-t.pageY))>=this.options.distance},_mouseDelayMet:function(){return this.mouseDelayMet},_mouseStart:function(){},_mouseDrag:function(){},_mouseStop:function(){},_mouseCapture:function(){return!0}}),t.ui.plugin={add:function(e,i,s){var n,o=t.ui[e].prototype;for(n in s)o.plugins[n]=o.plugins[n]||[],o.plugins[n].push([i,s[n]])},call:function(t,e,i,s){var n,o=t.plugins[e];if(o&&(s||t.element[0].parentNode&&11!==t.element[0].parentNode.nodeType))for(n=0;o.length>n;n++)t.options[o[n][0]]&&o[n][1].apply(t.element,i)}},t.widget("ui.resizable",t.ui.mouse,{version:"1.12.1",widgetEventPrefix:"resize",options:{alsoResize:!1,animate:!1,animateDuration:"slow",animateEasing:"swing",aspectRatio:!1,autoHide:!1,classes:{"ui-resizable-se":"ui-icon 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+},_change:{e:function(t,e){return{width:this.originalSize.width+e}},w:function(t,e){var i=this.originalSize,s=this.originalPosition;return{left:s.left+e,width:i.width-e}},n:function(t,e,i){var s=this.originalSize,n=this.originalPosition;return{top:n.top+i,height:s.height-i}},s:function(t,e,i){return{height:this.originalSize.height+i}},se:function(e,i,s){return t.extend(this._change.s.apply(this,arguments),this._change.e.apply(this,[e,i,s]))},sw:function(e,i,s){return t.extend(this._change.s.apply(this,arguments),this._change.w.apply(this,[e,i,s]))},ne:function(e,i,s){return t.extend(this._change.n.apply(this,arguments),this._change.e.apply(this,[e,i,s]))},nw:function(e,i,s){return 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i=t(this).resizable("instance"),s=i.options,n=i._proportionallyResizeElements,o=n.length&&/textarea/i.test(n[0].nodeName),a=o&&i._hasScroll(n[0],"left")?0:i.sizeDiff.height,r=o?0:i.sizeDiff.width,h={width:i.size.width-r,height:i.size.height-a},l=parseFloat(i.element.css("left"))+(i.position.left-i.originalPosition.left)||null,c=parseFloat(i.element.css("top"))+(i.position.top-i.originalPosition.top)||null;i.element.animate(t.extend(h,c&&l?{top:c,left:l}:{}),{duration:s.animateDuration,easing:s.animateEasing,step:function(){var s={width:parseFloat(i.element.css("width")),height:parseFloat(i.element.css("height")),top:parseFloat(i.element.css("top")),left:parseFloat(i.element.css("left"))};n&&n.length&&t(n[0]).css({width:s.width,height:s.height}),i._updateCache(s),i._propagate("resize",e)}})}}),t.ui.plugin.add("resizable","containment",{start:function(){var e,i,s,n,o,a,r,h=t(this).resizable("instance"),l=h.options,c=h.element,u=l.containment,d=u instanceof 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s=t(this).resizable("instance"),n=s.options,o=s.originalSize,a=s.originalPosition,r={height:s.size.height-o.height||0,width:s.size.width-o.width||0,top:s.position.top-a.top||0,left:s.position.left-a.left||0};t(n.alsoResize).each(function(){var e=t(this),s=t(this).data("ui-resizable-alsoresize"),n={},o=e.parents(i.originalElement[0]).length?["width","height"]:["width","height","top","left"];t.each(o,function(t,e){var i=(s[e]||0)+(r[e]||0);i&&i>=0&&(n[e]=i||null)}),e.css(n)})},stop:function(){t(this).removeData("ui-resizable-alsoresize")}}),t.ui.plugin.add("resizable","ghost",{start:function(){var e=t(this).resizable("instance"),i=e.size;e.ghost=e.originalElement.clone(),e.ghost.css({opacity:.25,display:"block",position:"relative",height:i.height,width:i.width,margin:0,left:0,top:0}),e._addClass(e.ghost,"ui-resizable-ghost"),t.uiBackCompat!==!1&&"string"==typeof e.options.ghost&&e.ghost.addClass(this.options.ghost),e.ghost.appendTo(e.helper)},resize:function(){var 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s.grid?[s.grid,s.grid]:s.grid,l=h[0]||1,c=h[1]||1,u=Math.round((n.width-o.width)/l)*l,d=Math.round((n.height-o.height)/c)*c,p=o.width+u,f=o.height+d,m=s.maxWidth&&p>s.maxWidth,g=s.maxHeight&&f>s.maxHeight,_=s.minWidth&&s.minWidth>p,v=s.minHeight&&s.minHeight>f;s.grid=h,_&&(p+=l),v&&(f+=c),m&&(p-=l),g&&(f-=c),/^(se|s|e)$/.test(r)?(i.size.width=p,i.size.height=f):/^(ne)$/.test(r)?(i.size.width=p,i.size.height=f,i.position.top=a.top-d):/^(sw)$/.test(r)?(i.size.width=p,i.size.height=f,i.position.left=a.left-u):((0>=f-c||0>=p-l)&&(e=i._getPaddingPlusBorderDimensions(this)),f-c>0?(i.size.height=f,i.position.top=a.top-d):(f=c-e.height,i.size.height=f,i.position.top=a.top+o.height-f),p-l>0?(i.size.width=p,i.position.left=a.left-u):(p=l-e.width,i.size.width=p,i.position.left=a.left+o.width-p))}}),t.ui.resizable});/**
+ * Copyright (c) 2007 Ariel Flesler - aflesler ○ gmail • com | https://github.com/flesler
+ * Licensed under MIT
+ * @author Ariel Flesler
+ * @version 2.1.2
+ */
+;(function(f){"use strict";"function"===typeof define&&define.amd?define(["jquery"],f):"undefined"!==typeof module&&module.exports?module.exports=f(require("jquery")):f(jQuery)})(function($){"use strict";function n(a){return!a.nodeName||-1!==$.inArray(a.nodeName.toLowerCase(),["iframe","#document","html","body"])}function h(a){return $.isFunction(a)||$.isPlainObject(a)?a:{top:a,left:a}}var p=$.scrollTo=function(a,d,b){return $(window).scrollTo(a,d,b)};p.defaults={axis:"xy",duration:0,limit:!0};$.fn.scrollTo=function(a,d,b){"object"=== typeof d&&(b=d,d=0);"function"===typeof b&&(b={onAfter:b});"max"===a&&(a=9E9);b=$.extend({},p.defaults,b);d=d||b.duration;var u=b.queue&&1<b.axis.length;u&&(d/=2);b.offset=h(b.offset);b.over=h(b.over);return this.each(function(){function k(a){var k=$.extend({},b,{queue:!0,duration:d,complete:a&&function(){a.call(q,e,b)}});r.animate(f,k)}if(null!==a){var l=n(this),q=l?this.contentWindow||window:this,r=$(q),e=a,f={},t;switch(typeof e){case "number":case "string":if(/^([+-]=?)?\d+(\.\d+)?(px|%)?$/.test(e)){e= h(e);break}e=l?$(e):$(e,q);case "object":if(e.length===0)return;if(e.is||e.style)t=(e=$(e)).offset()}var v=$.isFunction(b.offset)&&b.offset(q,e)||b.offset;$.each(b.axis.split(""),function(a,c){var d="x"===c?"Left":"Top",m=d.toLowerCase(),g="scroll"+d,h=r[g](),n=p.max(q,c);t?(f[g]=t[m]+(l?0:h-r.offset()[m]),b.margin&&(f[g]-=parseInt(e.css("margin"+d),10)||0,f[g]-=parseInt(e.css("border"+d+"Width"),10)||0),f[g]+=v[m]||0,b.over[m]&&(f[g]+=e["x"===c?"width":"height"]()*b.over[m])):(d=e[m],f[g]=d.slice&& "%"===d.slice(-1)?parseFloat(d)/100*n:d);b.limit&&/^\d+$/.test(f[g])&&(f[g]=0>=f[g]?0:Math.min(f[g],n));!a&&1<b.axis.length&&(h===f[g]?f={}:u&&(k(b.onAfterFirst),f={}))});k(b.onAfter)}})};p.max=function(a,d){var b="x"===d?"Width":"Height",h="scroll"+b;if(!n(a))return a[h]-$(a)[b.toLowerCase()]();var b="client"+b,k=a.ownerDocument||a.document,l=k.documentElement,k=k.body;return Math.max(l[h],k[h])-Math.min(l[b],k[b])};$.Tween.propHooks.scrollLeft=$.Tween.propHooks.scrollTop={get:function(a){return $(a.elem)[a.prop]()}, set:function(a){var d=this.get(a);if(a.options.interrupt&&a._last&&a._last!==d)return $(a.elem).stop();var b=Math.round(a.now);d!==b&&($(a.elem)[a.prop](b),a._last=this.get(a))}};return p});
+/*!
+ PowerTip v1.3.1 (2018-04-15)
+ https://stevenbenner.github.io/jquery-powertip/
+ Copyright (c) 2018 Steven Benner (http://stevenbenner.com/).
+ Released under MIT license.
+ https://raw.github.com/stevenbenner/jquery-powertip/master/LICENSE.txt
+*/
+(function(root,factory){if(typeof define==="function"&&define.amd){define(["jquery"],factory)}else if(typeof module==="object"&&module.exports){module.exports=factory(require("jquery"))}else{factory(root.jQuery)}})(this,function($){var $document=$(document),$window=$(window),$body=$("body");var DATA_DISPLAYCONTROLLER="displayController",DATA_HASACTIVEHOVER="hasActiveHover",DATA_FORCEDOPEN="forcedOpen",DATA_HASMOUSEMOVE="hasMouseMove",DATA_MOUSEONTOTIP="mouseOnToPopup",DATA_ORIGINALTITLE="originalTitle",DATA_POWERTIP="powertip",DATA_POWERTIPJQ="powertipjq",DATA_POWERTIPTARGET="powertiptarget",EVENT_NAMESPACE=".powertip",RAD2DEG=180/Math.PI,MOUSE_EVENTS=["click","dblclick","mousedown","mouseup","mousemove","mouseover","mouseout","mouseenter","mouseleave","contextmenu"];var session={tooltips:null,isTipOpen:false,isFixedTipOpen:false,isClosing:false,tipOpenImminent:false,activeHover:null,currentX:0,currentY:0,previousX:0,previousY:0,desyncTimeout:null,closeDelayTimeout:null,mouseTrackingActive:false,delayInProgress:false,windowWidth:0,windowHeight:0,scrollTop:0,scrollLeft:0};var Collision={none:0,top:1,bottom:2,left:4,right:8};$.fn.powerTip=function(opts,arg){var targetElements=this,options,tipController;if(!targetElements.length){return targetElements}if($.type(opts)==="string"&&$.powerTip[opts]){return $.powerTip[opts].call(targetElements,targetElements,arg)}options=$.extend({},$.fn.powerTip.defaults,opts);tipController=new TooltipController(options);initTracking();targetElements.each(function elementSetup(){var $this=$(this),dataPowertip=$this.data(DATA_POWERTIP),dataElem=$this.data(DATA_POWERTIPJQ),dataTarget=$this.data(DATA_POWERTIPTARGET),title=$this.attr("title");if(!dataPowertip&&!dataTarget&&!dataElem&&title){$this.data(DATA_POWERTIP,title);$this.data(DATA_ORIGINALTITLE,title);$this.removeAttr("title")}$this.data(DATA_DISPLAYCONTROLLER,new DisplayController($this,options,tipController))});if(!options.manual){$.each(options.openEvents,function(idx,evt){if($.inArray(evt,options.closeEvents)>-1){targetElements.on(evt+EVENT_NAMESPACE,function elementToggle(event){$.powerTip.toggle(this,event)})}else{targetElements.on(evt+EVENT_NAMESPACE,function elementOpen(event){$.powerTip.show(this,event)})}});$.each(options.closeEvents,function(idx,evt){if($.inArray(evt,options.openEvents)<0){targetElements.on(evt+EVENT_NAMESPACE,function elementClose(event){$.powerTip.hide(this,!isMouseEvent(event))})}});targetElements.on("keydown"+EVENT_NAMESPACE,function elementKeyDown(event){if(event.keyCode===27){$.powerTip.hide(this,true)}})}return targetElements};$.fn.powerTip.defaults={fadeInTime:200,fadeOutTime:100,followMouse:false,popupId:"powerTip",popupClass:null,intentSensitivity:7,intentPollInterval:100,closeDelay:100,placement:"n",smartPlacement:false,offset:10,mouseOnToPopup:false,manual:false,openEvents:["mouseenter","focus"],closeEvents:["mouseleave","blur"]};$.fn.powerTip.smartPlacementLists={n:["n","ne","nw","s"],e:["e","ne","se","w","nw","sw","n","s","e"],s:["s","se","sw","n"],w:["w","nw","sw","e","ne","se","n","s","w"],nw:["nw","w","sw","n","s","se","nw"],ne:["ne","e","se","n","s","sw","ne"],sw:["sw","w","nw","s","n","ne","sw"],se:["se","e","ne","s","n","nw","se"],"nw-alt":["nw-alt","n","ne-alt","sw-alt","s","se-alt","w","e"],"ne-alt":["ne-alt","n","nw-alt","se-alt","s","sw-alt","e","w"],"sw-alt":["sw-alt","s","se-alt","nw-alt","n","ne-alt","w","e"],"se-alt":["se-alt","s","sw-alt","ne-alt","n","nw-alt","e","w"]};$.powerTip={show:function apiShowTip(element,event){if(isMouseEvent(event)){trackMouse(event);session.previousX=event.pageX;session.previousY=event.pageY;$(element).data(DATA_DISPLAYCONTROLLER).show()}else{$(element).first().data(DATA_DISPLAYCONTROLLER).show(true,true)}return element},reposition:function apiResetPosition(element){$(element).first().data(DATA_DISPLAYCONTROLLER).resetPosition();return element},hide:function apiCloseTip(element,immediate){var displayController;immediate=element?immediate:true;if(element){displayController=$(element).first().data(DATA_DISPLAYCONTROLLER)}else if(session.activeHover){displayController=session.activeHover.data(DATA_DISPLAYCONTROLLER)}if(displayController){displayController.hide(immediate)}return element},toggle:function apiToggle(element,event){if(session.activeHover&&session.activeHover.is(element)){$.powerTip.hide(element,!isMouseEvent(event))}else{$.powerTip.show(element,event)}return element}};$.powerTip.showTip=$.powerTip.show;$.powerTip.closeTip=$.powerTip.hide;function CSSCoordinates(){var me=this;me.top="auto";me.left="auto";me.right="auto";me.bottom="auto";me.set=function(property,value){if($.isNumeric(value)){me[property]=Math.round(value)}}}function DisplayController(element,options,tipController){var hoverTimer=null,myCloseDelay=null;function openTooltip(immediate,forceOpen){cancelTimer();if(!element.data(DATA_HASACTIVEHOVER)){if(!immediate){session.tipOpenImminent=true;hoverTimer=setTimeout(function intentDelay(){hoverTimer=null;checkForIntent()},options.intentPollInterval)}else{if(forceOpen){element.data(DATA_FORCEDOPEN,true)}closeAnyDelayed();tipController.showTip(element)}}else{cancelClose()}}function closeTooltip(disableDelay){if(myCloseDelay){myCloseDelay=session.closeDelayTimeout=clearTimeout(myCloseDelay);session.delayInProgress=false}cancelTimer();session.tipOpenImminent=false;if(element.data(DATA_HASACTIVEHOVER)){element.data(DATA_FORCEDOPEN,false);if(!disableDelay){session.delayInProgress=true;session.closeDelayTimeout=setTimeout(function closeDelay(){session.closeDelayTimeout=null;tipController.hideTip(element);session.delayInProgress=false;myCloseDelay=null},options.closeDelay);myCloseDelay=session.closeDelayTimeout}else{tipController.hideTip(element)}}}function checkForIntent(){var xDifference=Math.abs(session.previousX-session.currentX),yDifference=Math.abs(session.previousY-session.currentY),totalDifference=xDifference+yDifference;if(totalDifference<options.intentSensitivity){cancelClose();closeAnyDelayed();tipController.showTip(element)}else{session.previousX=session.currentX;session.previousY=session.currentY;openTooltip()}}function cancelTimer(stopClose){hoverTimer=clearTimeout(hoverTimer);if(session.closeDelayTimeout&&myCloseDelay===session.closeDelayTimeout||stopClose){cancelClose()}}function cancelClose(){session.closeDelayTimeout=clearTimeout(session.closeDelayTimeout);session.delayInProgress=false}function closeAnyDelayed(){if(session.delayInProgress&&session.activeHover&&!session.activeHover.is(element)){session.activeHover.data(DATA_DISPLAYCONTROLLER).hide(true)}}function repositionTooltip(){tipController.resetPosition(element)}this.show=openTooltip;this.hide=closeTooltip;this.cancel=cancelTimer;this.resetPosition=repositionTooltip}function PlacementCalculator(){function computePlacementCoords(element,placement,tipWidth,tipHeight,offset){var placementBase=placement.split("-")[0],coords=new CSSCoordinates,position;if(isSvgElement(element)){position=getSvgPlacement(element,placementBase)}else{position=getHtmlPlacement(element,placementBase)}switch(placement){case"n":coords.set("left",position.left-tipWidth/2);coords.set("bottom",session.windowHeight-position.top+offset);break;case"e":coords.set("left",position.left+offset);coords.set("top",position.top-tipHeight/2);break;case"s":coords.set("left",position.left-tipWidth/2);coords.set("top",position.top+offset);break;case"w":coords.set("top",position.top-tipHeight/2);coords.set("right",session.windowWidth-position.left+offset);break;case"nw":coords.set("bottom",session.windowHeight-position.top+offset);coords.set("right",session.windowWidth-position.left-20);break;case"nw-alt":coords.set("left",position.left);coords.set("bottom",session.windowHeight-position.top+offset);break;case"ne":coords.set("left",position.left-20);coords.set("bottom",session.windowHeight-position.top+offset);break;case"ne-alt":coords.set("bottom",session.windowHeight-position.top+offset);coords.set("right",session.windowWidth-position.left);break;case"sw":coords.set("top",position.top+offset);coords.set("right",session.windowWidth-position.left-20);break;case"sw-alt":coords.set("left",position.left);coords.set("top",position.top+offset);break;case"se":coords.set("left",position.left-20);coords.set("top",position.top+offset);break;case"se-alt":coords.set("top",position.top+offset);coords.set("right",session.windowWidth-position.left);break}return coords}function getHtmlPlacement(element,placement){var objectOffset=element.offset(),objectWidth=element.outerWidth(),objectHeight=element.outerHeight(),left,top;switch(placement){case"n":left=objectOffset.left+objectWidth/2;top=objectOffset.top;break;case"e":left=objectOffset.left+objectWidth;top=objectOffset.top+objectHeight/2;break;case"s":left=objectOffset.left+objectWidth/2;top=objectOffset.top+objectHeight;break;case"w":left=objectOffset.left;top=objectOffset.top+objectHeight/2;break;case"nw":left=objectOffset.left;top=objectOffset.top;break;case"ne":left=objectOffset.left+objectWidth;top=objectOffset.top;break;case"sw":left=objectOffset.left;top=objectOffset.top+objectHeight;break;case"se":left=objectOffset.left+objectWidth;top=objectOffset.top+objectHeight;break}return{top:top,left:left}}function getSvgPlacement(element,placement){var svgElement=element.closest("svg")[0],domElement=element[0],point=svgElement.createSVGPoint(),boundingBox=domElement.getBBox(),matrix=domElement.getScreenCTM(),halfWidth=boundingBox.width/2,halfHeight=boundingBox.height/2,placements=[],placementKeys=["nw","n","ne","e","se","s","sw","w"],coords,rotation,steps,x;function pushPlacement(){placements.push(point.matrixTransform(matrix))}point.x=boundingBox.x;point.y=boundingBox.y;pushPlacement();point.x+=halfWidth;pushPlacement();point.x+=halfWidth;pushPlacement();point.y+=halfHeight;pushPlacement();point.y+=halfHeight;pushPlacement();point.x-=halfWidth;pushPlacement();point.x-=halfWidth;pushPlacement();point.y-=halfHeight;pushPlacement();if(placements[0].y!==placements[1].y||placements[0].x!==placements[7].x){rotation=Math.atan2(matrix.b,matrix.a)*RAD2DEG;steps=Math.ceil((rotation%360-22.5)/45);if(steps<1){steps+=8}while(steps--){placementKeys.push(placementKeys.shift())}}for(x=0;x<placements.length;x++){if(placementKeys[x]===placement){coords=placements[x];break}}return{top:coords.y+session.scrollTop,left:coords.x+session.scrollLeft}}this.compute=computePlacementCoords}function TooltipController(options){var placementCalculator=new 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tipMouseEnter(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).cancel()}});tipElement.on("mouseleave"+EVENT_NAMESPACE,function tipMouseLeave(){if(session.activeHover){session.activeHover.data(DATA_DISPLAYCONTROLLER).hide()}})}tipElement.fadeIn(options.fadeInTime,function fadeInCallback(){if(!session.desyncTimeout){session.desyncTimeout=setInterval(closeDesyncedTip,500)}element.trigger("powerTipOpen")})}function hideTip(element){session.isClosing=true;session.isTipOpen=false;session.desyncTimeout=clearInterval(session.desyncTimeout);element.data(DATA_HASACTIVEHOVER,false);element.data(DATA_FORCEDOPEN,false);$document.off("click"+EVENT_NAMESPACE);tipElement.off(EVENT_NAMESPACE);tipElement.fadeOut(options.fadeOutTime,function fadeOutCallback(){var coords=new CSSCoordinates;session.activeHover=null;session.isClosing=false;session.isFixedTipOpen=false;tipElement.removeClass();coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);tipElement.css(coords);element.trigger("powerTipClose")})}function positionTipOnCursor(){var tipWidth,tipHeight,coords,collisions,collisionCount;if(!session.isFixedTipOpen&&(session.isTipOpen||session.tipOpenImminent&&tipElement.data(DATA_HASMOUSEMOVE))){tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=new CSSCoordinates;coords.set("top",session.currentY+options.offset);coords.set("left",session.currentX+options.offset);collisions=getViewportCollisions(coords,tipWidth,tipHeight);if(collisions!==Collision.none){collisionCount=countFlags(collisions);if(collisionCount===1){if(collisions===Collision.right){coords.set("left",session.scrollLeft+session.windowWidth-tipWidth)}else if(collisions===Collision.bottom){coords.set("top",session.scrollTop+session.windowHeight-tipHeight)}}else{coords.set("left",session.currentX-tipWidth-options.offset);coords.set("top",session.currentY-tipHeight-options.offset)}}tipElement.css(coords)}}function positionTipOnElement(element){var priorityList,finalPlacement;if(options.smartPlacement||options.followMouse&&element.data(DATA_FORCEDOPEN)){priorityList=$.fn.powerTip.smartPlacementLists[options.placement];$.each(priorityList,function(idx,pos){var collisions=getViewportCollisions(placeTooltip(element,pos),tipElement.outerWidth(),tipElement.outerHeight());finalPlacement=pos;return collisions!==Collision.none})}else{placeTooltip(element,options.placement);finalPlacement=options.placement}tipElement.removeClass("w nw sw e ne se n s w se-alt sw-alt ne-alt nw-alt");tipElement.addClass(finalPlacement)}function placeTooltip(element,placement){var iterationCount=0,tipWidth,tipHeight,coords=new CSSCoordinates;coords.set("top",0);coords.set("left",0);tipElement.css(coords);do{tipWidth=tipElement.outerWidth();tipHeight=tipElement.outerHeight();coords=placementCalculator.compute(element,placement,tipWidth,tipHeight,options.offset);tipElement.css(coords)}while(++iterationCount<=5&&(tipWidth!==tipElement.outerWidth()||tipHeight!==tipElement.outerHeight()));return coords}function closeDesyncedTip(){var isDesynced=false,hasDesyncableCloseEvent=$.grep(["mouseleave","mouseout","blur","focusout"],function(eventType){return $.inArray(eventType,options.closeEvents)!==-1}).length>0;if(session.isTipOpen&&!session.isClosing&&!session.delayInProgress&&hasDesyncableCloseEvent){if(session.activeHover.data(DATA_HASACTIVEHOVER)===false||session.activeHover.is(":disabled")){isDesynced=true}else 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+ * jQuery UI Touch Punch 0.2.3
+ *
+ * Copyright 2011–2014, Dave Furfero
+ * Dual licensed under the MIT or GPL Version 2 licenses.
+ *
+ * Depends:
+ *  jquery.ui.widget.js
+ *  jquery.ui.mouse.js
+ */
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+ * http://www.smartmenus.org/
+ * Copyright Vasil Dinkov, Vadikom Web Ltd. http://vadikom.com; Licensed MIT */(function(t){"function"==typeof define&&define.amd?define(["jquery"],t):"object"==typeof module&&"object"==typeof module.exports?module.exports=t(require("jquery")):t(jQuery)})(function($){function initMouseDetection(t){var e=".smartmenus_mouse";if(mouseDetectionEnabled||t)mouseDetectionEnabled&&t&&($(document).off(e),mouseDetectionEnabled=!1);else{var i=!0,s=null,o={mousemove:function(t){var e={x:t.pageX,y:t.pageY,timeStamp:(new Date).getTime()};if(s){var o=Math.abs(s.x-e.x),a=Math.abs(s.y-e.y);if((o>0||a>0)&&2>=o&&2>=a&&300>=e.timeStamp-s.timeStamp&&(mouse=!0,i)){var n=$(t.target).closest("a");n.is("a")&&$.each(menuTrees,function(){return $.contains(this.$root[0],n[0])?(this.itemEnter({currentTarget:n[0]}),!1):void 0}),i=!1}}s=e}};o[touchEvents?"touchstart":"pointerover pointermove pointerout MSPointerOver MSPointerMove 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\ No newline at end of file
diff --git a/docs/html/llm__client_8py.html b/docs/html/llm__client_8py.html
new file mode 100644
index 0000000..c970d46
--- /dev/null
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+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
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+       class="ui-resizable-handle">
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+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+/* @license-end */
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+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
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+
+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI Tool </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p ><img src="https://github.com/yourorganization/penify-cli/workflows/Tests/badge.svg" alt="Tests" style="pointer-events: none;" class="inline"/> <img src="./coverage.svg" alt="Coverage" style="pointer-events: none;" class="inline"/></p>
+<p >A CLI tool to generate smart commit messages, code documentation, and more.</p>
+<h1><a class="anchor" id="autotoc_md157"></a>
+Features</h1>
+<ul>
+<li>Automatically generate documentation for your code</li>
+<li>Support for multiple programming languages</li>
+<li>Git hook integration for automatic documentation on commits</li>
+<li>Folder and file analysis</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md158"></a>
+Installation</h1>
+<p >Install from PyPI:</p>
+<div class="fragment"><div class="line">pip install penify</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md159"></a>
+Usage</h1>
+<p >Penify CLI provides several subcommands for different functionalities, organized into basic commands (no login required) and advanced commands (login required).</p>
+<h1><a class="anchor" id="autotoc_md160"></a>
+Basic Commands (No login required)</h1>
+<h2><a class="anchor" id="autotoc_md161"></a>
+Commit</h2>
+<p >Generate smart commit messages using local LLM:</p>
+<div class="fragment"><div class="line">penify commit [-m &quot;Optional message&quot;] [-e] [-d]</div>
+</div><!-- fragment --><p >Options:</p><ul>
+<li><code>-m, --message</code>: Optional custom commit message</li>
+<li><code>-e, --terminal</code>: Open editor to modify commit message before committing</li>
+<li><code>-d, --description</code>: Generate commit message with both title and description (without this flag, only title is generated)</li>
+</ul>
+<h2><a class="anchor" id="autotoc_md162"></a>
+Config</h2>
+<p >Configure local LLM and JIRA settings:</p>
+<div class="fragment"><div class="line"># Configure LLM settings</div>
+<div class="line">penify config llm --model MODEL_NAME [--api-base API_URL] [--api-key API_KEY]</div>
+<div class="line"> </div>
+<div class="line"># Configure LLM settings through web interface</div>
+<div class="line">penify config llm-web</div>
+<div class="line"> </div>
+<div class="line"># Configure JIRA settings</div>
+<div class="line">penify config jira --url JIRA_URL --username USERNAME --api-token TOKEN [--verify]</div>
+<div class="line"> </div>
+<div class="line"># Configure JIRA settings through web interface</div>
+<div class="line">penify config jira-web</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md163"></a>
+Advanced Commands (Login required)</h1>
+<h2><a class="anchor" id="autotoc_md164"></a>
+Login</h2>
+<p >To log in and obtain an API token:</p>
+<div class="fragment"><div class="line">penify login</div>
+</div><!-- fragment --><p >This command will open a browser window for authentication. After successful login, the API key will be saved locally for future use.</p>
+<h2><a class="anchor" id="autotoc_md165"></a>
+Documentation Generation</h2>
+<p >Generate documentation for Git diff, files or folders:</p>
+<div class="fragment"><div class="line"># Generate documentation for latest Git commit diff</div>
+<div class="line">penify docgen</div>
+<div class="line"> </div>
+<div class="line"># Generate documentation for specific file or folder</div>
+<div class="line">penify docgen -l /path/to/file/or/folder</div>
+</div><!-- fragment --><p >Options:</p><ul>
+<li><code>-l, --location</code>: Path to specific file or folder for documentation generation (defaults to current directory)</li>
+</ul>
+<h2><a class="anchor" id="autotoc_md166"></a>
+Git Hook Management</h2>
+<p >Install or uninstall Git post-commit hooks:</p>
+<div class="fragment"><div class="line"># Install Git hook</div>
+<div class="line">penify docgen install-hook [-l /path/to/repo]</div>
+<div class="line"> </div>
+<div class="line"># Uninstall Git hook</div>
+<div class="line">penify docgen uninstall-hook [-l /path/to/repo]</div>
+</div><!-- fragment --><p >Options:</p><ul>
+<li><code>-l, --location</code>: Path to the Git repository (defaults to current directory)</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md167"></a>
+Authentication</h1>
+<p >Penify CLI uses an API token for authentication with advanced features.</p>
+<p >If no token is available and you try to access an advanced feature, you'll be prompted to log in.</p>
+<h1><a class="anchor" id="autotoc_md168"></a>
+Local LLM Configuration</h1>
+<p >For commit message generation, Penify can use a local LLM. Configure it using:</p>
+<div class="fragment"><div class="line">penify config llm --model MODEL_NAME --api-base API_URL --api-key API_KEY</div>
+</div><!-- fragment --><p >Common configurations:</p><ul>
+<li>OpenAI: <code>--model gpt-3.5-turbo --api-base <a href="https://api.openai.com/v1">https://api.openai.com/v1</a> --api-key YOUR_KEY</code></li>
+<li>Anthropic: <code>--model claude-2 --api-base <a href="https://api.anthropic.com">https://api.anthropic.com</a> --api-key YOUR_KEY</code></li>
+</ul>
+<h1><a class="anchor" id="autotoc_md169"></a>
+JIRA Integration</h1>
+<p >Configure JIRA integration to enhance commit messages with issue details:</p>
+<div class="fragment"><div class="line">penify config jira --url https://your-domain.atlassian.net --username your-email@example.com --api-token YOUR_API_TOKEN</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md170"></a>
+Development</h1>
+<p >To set up the development environment:</p>
+<ol type="1">
+<li>Clone the repository: <div class="fragment"><div class="line">git clone https://github.com/SingularityX-ai/penify-cli.git</div>
+</div><!-- fragment --></li>
+<li>Install the package in editable mode: <div class="fragment"><div class="line">pip install -e .</div>
+</div><!-- fragment --></li>
+</ol>
+<h2><a class="anchor" id="autotoc_md171"></a>
+Running Tests</h2>
+<div class="fragment"><div class="line">pytest</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md172"></a>
+License</h1>
+<p >This project is licensed under the MIT License.</p>
+<h1><a class="anchor" id="autotoc_md173"></a>
+Author</h1>
+<p >Suman Saurabh (<a href="#" onclick="location.href='mai'+'lto:'+'ss.'+'su'+'man'+'sa'+'ura'+'bh'+'92@'+'gm'+'ail'+'.c'+'om'; return false;">ss.su<span class="obfuscator">.nosp@m.</span>mans<span class="obfuscator">.nosp@m.</span>aurab<span class="obfuscator">.nosp@m.</span>h92@<span class="obfuscator">.nosp@m.</span>gmail<span class="obfuscator">.nosp@m.</span>.com</a>)</p>
+<h1><a class="anchor" id="autotoc_md174"></a>
+Contributing</h1>
+<p >Contributions are welcome! Please feel free to submit a Pull Request.</p>
+<h1><a class="anchor" id="autotoc_md175"></a>
+Issues</h1>
+<p >If you encounter any problems or have suggestions, please file an issue on the <a href="https://github.com/SingularityX-ai/penify/issues">GitHub repository</a>.</p>
+<h1><a class="anchor" id="autotoc_md176"></a>
+Support</h1>
+<p >For automated API Documentation, Architecture Documentation, Code Documentation, Pull Request Documentation, or if you need a demo, please join our <a href="https://discord.gg/wqrc8JeV">Discord support channel</a>. </p>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html b/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html
new file mode 100644
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+
+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI - Commit Commands </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p >The <code>commit</code> command allows you to generate smart, AI-powered commit messages for your Git changes. This document explains all available options and combinations.</p>
+<h1><a class="anchor" id="autotoc_md1"></a>
+Basic Usage</h1>
+<div class="fragment"><div class="line">penify commit</div>
+</div><!-- fragment --><p >By default, this command:</p><ul>
+<li>Analyzes your staged Git changes</li>
+<li>Generates a concise commit title only</li>
+<li>Uses local LLM if configured, or falls back to Penify API</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md2"></a>
+Command Options</h1>
+<h2><a class="anchor" id="autotoc_md3"></a>
+&lt;tt&gt;-m, --message&lt;/tt&gt;</h2>
+<p >Provide context for the commit message generation:</p>
+<div class="fragment"><div class="line">penify commit -m &quot;Fix login flow&quot;</div>
+</div><!-- fragment --><p >This hint helps the AI understand your intention and improves the quality of the generated message.</p>
+<h2><a class="anchor" id="autotoc_md4"></a>
+&lt;tt&gt;-e, --terminal&lt;/tt&gt;</h2>
+<p >Open an editor to review and edit the generated commit message before committing:</p>
+<div class="fragment"><div class="line">penify commit -e</div>
+</div><!-- fragment --><p >This opens your default Git editor with the generated message for review.</p>
+<h2><a class="anchor" id="autotoc_md5"></a>
+&lt;tt&gt;-d, --description&lt;/tt&gt;</h2>
+<p >Generate a detailed commit message with both title and description:</p>
+<div class="fragment"><div class="line">penify commit -d</div>
+</div><!-- fragment --><p >Without this flag, only the commit title is generated.</p>
+<h1><a class="anchor" id="autotoc_md6"></a>
+Option Combinations</h1>
+<p >You can combine these options for different workflows:</p>
+<h2><a class="anchor" id="autotoc_md7"></a>
+Generate Title Only with Context</h2>
+<div class="fragment"><div class="line">penify commit -m &quot;Update login UI&quot;</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md8"></a>
+Generate Title and Description with Context</h2>
+<div class="fragment"><div class="line">penify commit -m &quot;Update login UI&quot; -d</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md9"></a>
+Generate and Edit Full Commit Message</h2>
+<div class="fragment"><div class="line">penify commit -d -e</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md10"></a>
+Generate, Edit, and Provide Context</h2>
+<div class="fragment"><div class="line">penify commit -m &quot;Refactor authentication&quot; -d -e</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md11"></a>
+LLM and JIRA Integration</h1>
+<h2><a class="anchor" id="autotoc_md12"></a>
+Using Local LLM</h2>
+<p >If you've configured a local LLM using <code>penify config llm</code>, the commit command will automatically use it for message generation.</p>
+<p >Benefits:</p><ul>
+<li>Privacy: your code changes don't leave your machine</li>
+<li>Speed: no network latency</li>
+<li>Works offline</li>
+</ul>
+<h2><a class="anchor" id="autotoc_md13"></a>
+JIRA Enhancement</h2>
+<p >If you've configured JIRA integration using <code>penify config jira</code>, the commit command will:</p>
+<ol type="1">
+<li>Detect JIRA issue references in your changes</li>
+<li>Fetch issue details from your JIRA instance</li>
+<li>Include issue information in the commit message</li>
+<li>Format the commit message according to JIRA's smart commit format</li>
+</ol>
+<p >Example output: </p><div class="fragment"><div class="line">PROJ-123: Fix authentication bug in login flow</div>
+<div class="line"> </div>
+<div class="line">- Updated OAuth token validation</div>
+<div class="line">- Fixed session timeout handling</div>
+<div class="line">- Added unit tests for edge cases</div>
+<div class="line"> </div>
+<div class="line">[PROJ-123]</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md14"></a>
+Configuration Requirements</h1>
+<p >For the <code>commit</code> command to work:</p>
+<ol type="1">
+<li>You must have configured either:<ul>
+<li>Local LLM via <code>penify config llm</code>, OR</li>
+<li>Logged in via <code>penify login</code></li>
+</ul>
+</li>
+<li>For JIRA enhancement (optional):<ul>
+<li>Configure JIRA via <code>penify config jira</code></li>
+</ul>
+</li>
+</ol>
+<h1><a class="anchor" id="autotoc_md15"></a>
+Examples</h1>
+<h2><a class="anchor" id="autotoc_md16"></a>
+Basic Commit with Default Settings</h2>
+<div class="fragment"><div class="line"># Stage your changes</div>
+<div class="line">git add .</div>
+<div class="line"> </div>
+<div class="line"># Generate commit message</div>
+<div class="line">penify commit</div>
+<div class="line"> </div>
+<div class="line"># Commit with the generated message</div>
+<div class="line">git commit -m &quot;Generated message here&quot;</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md17"></a>
+Full Workflow with All Features</h2>
+<div class="fragment"><div class="line"># Stage your changes</div>
+<div class="line">git add .</div>
+<div class="line"> </div>
+<div class="line"># Generate detailed commit message with JIRA integration, </div>
+<div class="line"># provide context, and open editor for review</div>
+<div class="line">penify commit -m &quot;Fix login issue&quot; -d -e</div>
+<div class="line"> </div>
+<div class="line"># The commit is automatically completed after you save and exit the editor</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md18"></a>
+Troubleshooting</h1>
+<h2><a class="anchor" id="autotoc_md19"></a>
+Common Issues</h2>
+<ol type="1">
+<li>**"No LLM model or API token provided"**<ul>
+<li>Run <code>penify config llm</code> to configure a local LLM, or</li>
+<li>Run <code>penify login</code> to authenticate with Penify</li>
+</ul>
+</li>
+<li>**"Failed to connect to JIRA"**<ul>
+<li>Check your JIRA configuration with <code>cat ~/.penify</code></li>
+<li>Verify your network connection</li>
+<li>Ensure your JIRA credentials are valid</li>
+</ul>
+</li>
+<li>**"Error initializing LLM client"**<ul>
+<li>Verify your LLM configuration settings</li>
+<li>Ensure the LLM API is accessible </li>
+</ul>
+</li>
+</ol>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
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+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html b/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html
new file mode 100644
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+   </div>
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+    </div>
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+       class="ui-resizable-handle">
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+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
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+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI - Configuration Commands </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p >The <code>config</code> command allows you to set up and manage configuration settings for Penify CLI. This document explains all available configuration options and how to use them.</p>
+<h1><a class="anchor" id="autotoc_md21"></a>
+Configuration Overview</h1>
+<p >Penify CLI stores configuration in a JSON file at <code>~/.penify/config.json</code>. The configuration includes:</p>
+<ul>
+<li>LLM (Large Language Model) settings for local commit message generation</li>
+<li>JIRA integration settings for enhanced commit messages</li>
+<li>API tokens and other credentials</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md22"></a>
+Basic Usage</h1>
+<div class="fragment"><div class="line"># Configure LLM settings</div>
+<div class="line">penify config llm</div>
+<div class="line"> </div>
+<div class="line"># Configure JIRA integration</div>
+<div class="line">penify config jira</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md23"></a>
+LLM Configuration</h1>
+<h2><a class="anchor" id="autotoc_md24"></a>
+Web Interface</h2>
+<p >Running <code>penify config llm</code> opens a web interface in your browser where you can configure:</p>
+<ol type="1">
+<li><b>Model</b>: The LLM model to use (e.g., <code>gpt-3.5-turbo</code>)</li>
+<li><b>API Base URL</b>: The endpoint URL for your LLM API (e.g., <code><a href="https://api.openai.com/v1">https://api.openai.com/v1</a></code>)</li>
+<li><b>API Key</b>: Your authentication key for the LLM API</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md25"></a>
+Supported LLMs</h2>
+<p >Penify CLI supports various LLM providers:</p>
+<h3><a class="anchor" id="autotoc_md26"></a>
+OpenAI</h3>
+<ul>
+<li>Model: <code>gpt-3.5-turbo</code> or <code>gpt-4</code></li>
+<li>API Base: <code><a href="https://api.openai.com/v1">https://api.openai.com/v1</a></code></li>
+<li>API Key: Your OpenAI API key</li>
+</ul>
+<h3><a class="anchor" id="autotoc_md27"></a>
+Anthropic</h3>
+<ul>
+<li>Model: <code>claude-instant-1</code> or <code>claude-2</code></li>
+<li>API Base: <code><a href="https://api.anthropic.com/v1">https://api.anthropic.com/v1</a></code></li>
+<li>API Key: Your Anthropic API key</li>
+</ul>
+<h3><a class="anchor" id="autotoc_md28"></a>
+Ollama (Local)</h3>
+<ul>
+<li>Model: <code>llama2</code> or any model you have installed</li>
+<li>API Base: <code><a href="http://localhost:11434">http://localhost:11434</a></code></li>
+<li>API Key: (leave blank)</li>
+</ul>
+<h3><a class="anchor" id="autotoc_md29"></a>
+Azure OpenAI</h3>
+<ul>
+<li>Model: Your deployed model name</li>
+<li>API Base: Your Azure endpoint</li>
+<li>API Key: Your Azure API key</li>
+</ul>
+<h2><a class="anchor" id="autotoc_md30"></a>
+Configuration File Structure</h2>
+<p >After configuration, your <code>~/.penify/config.json</code> will contain:</p>
+<div class="fragment"><div class="line">{</div>
+<div class="line">  &quot;llm&quot;: {</div>
+<div class="line">    &quot;model&quot;: &quot;gpt-3.5-turbo&quot;,</div>
+<div class="line">    &quot;api_base&quot;: &quot;https://api.openai.com/v1&quot;,</div>
+<div class="line">    &quot;api_key&quot;: &quot;sk-...&quot;</div>
+<div class="line">  }</div>
+<div class="line">}</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md31"></a>
+JIRA Configuration</h1>
+<h2><a class="anchor" id="autotoc_md32"></a>
+Web Interface</h2>
+<p >Running <code>penify config jira</code> opens a web interface where you can configure:</p>
+<ol type="1">
+<li><b>JIRA URL</b>: Your JIRA instance URL (e.g., <code><a href="https://yourcompany.atlassian.net">https://yourcompany.atlassian.net</a></code>)</li>
+<li><b>Username</b>: Your JIRA username (typically your email)</li>
+<li><b>API Token</b>: Your JIRA API token</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md33"></a>
+Creating a JIRA API Token</h2>
+<ol type="1">
+<li>Log in to <a href="https://id.atlassian.com/manage-profile/security/api-tokens">https://id.atlassian.com/manage-profile/security/api-tokens</a></li>
+<li>Click "Create API token"</li>
+<li>Give it a name (e.g., "Penify CLI")</li>
+<li>Copy the generated token and paste it into the configuration</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md34"></a>
+Configuration File Structure</h2>
+<p >After configuration, your <code>~/.penify/config.json</code> will contain:</p>
+<div class="fragment"><div class="line">{</div>
+<div class="line">  &quot;jira&quot;: {</div>
+<div class="line">    &quot;url&quot;: &quot;https://yourcompany.atlassian.net&quot;,</div>
+<div class="line">    &quot;username&quot;: &quot;your.email@example.com&quot;,</div>
+<div class="line">    &quot;api_token&quot;: &quot;your-jira-api-token&quot;</div>
+<div class="line">  }</div>
+<div class="line">}</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md35"></a>
+Configuration Locations</h1>
+<p >Penify CLI looks for configuration in multiple locations:</p>
+<ol type="1">
+<li>Project-specific: <code>.penify/config.json</code> in the Git repository root</li>
+<li>User-specific: <code>~/.penify/config.json</code> in your home directory</li>
+</ol>
+<p >The project-specific configuration takes precedence if both exist.</p>
+<h1><a class="anchor" id="autotoc_md36"></a>
+Environment Variables</h1>
+<p >You can override configuration settings using environment variables:</p>
+<ul>
+<li><code>PENIFY_API_TOKEN</code>: Override the stored API token</li>
+<li><code>PENIFY_LLM_MODEL</code>: Override the configured LLM model</li>
+<li><code>PENIFY_LLM_API_BASE</code>: Override the configured LLM API base URL</li>
+<li><code>PENIFY_LLM_API_KEY</code>: Override the configured LLM API key</li>
+<li><code>PENIFY_JIRA_URL</code>: Override the configured JIRA URL</li>
+<li><code>PENIFY_JIRA_USER</code>: Override the configured JIRA username</li>
+<li><code>PENIFY_JIRA_TOKEN</code>: Override the configured JIRA API token</li>
+</ul>
+<p >Example: </p><div class="fragment"><div class="line">export PENIFY_LLM_MODEL=&quot;gpt-4&quot;</div>
+<div class="line">penify commit</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md37"></a>
+Command-Line Configuration</h1>
+<p >For advanced users or scripting, you can directly edit the configuration file:</p>
+<div class="fragment"><div class="line"># View current configuration</div>
+<div class="line">cat ~/.penify/config.json</div>
+<div class="line"> </div>
+<div class="line"># Edit configuration with your preferred editor</div>
+<div class="line">nano ~/.penify/config.json</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md38"></a>
+Sharing Configuration</h1>
+<p >You can share configuration between machines by copying the <code>.penify/config.json</code> file. However, be cautious with API keys and credentials.</p>
+<p >For team settings, consider:</p><ol type="1">
+<li>Using a project-specific <code>.penify/config.json</code> with shared settings</li>
+<li>Excluding API keys from shared configuration</li>
+<li>Using environment variables for sensitive credentials</li>
+</ol>
+<h1><a class="anchor" id="autotoc_md39"></a>
+Troubleshooting</h1>
+<h2><a class="anchor" id="autotoc_md40"></a>
+Common Issues</h2>
+<ol type="1">
+<li>**"Error reading configuration file"**<ul>
+<li>Check if the file exists: <code>ls -la ~/.penify</code></li>
+<li>Ensure it contains valid JSON: <code>cat ~/.penify/config.json</code></li>
+</ul>
+</li>
+<li>**"Failed to connect to LLM API"**<ul>
+<li>Verify API base URL and API key</li>
+<li>Check network connectivity to the API endpoint</li>
+<li>Ensure your account has access to the specified model</li>
+</ul>
+</li>
+<li>**"Failed to connect to JIRA"**<ul>
+<li>Check JIRA URL format (should include <code><a href="https://">https://</a></code>)</li>
+<li>Verify username and API token</li>
+<li>Ensure your JIRA account has API access permissions </li>
+</ul>
+</li>
+</ol>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
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+     onmouseover="return searchBox.OnSearchSelectShow()"
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+
+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI - Detailed Usage Guide </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p >This document provides in-depth information about all features and capabilities of the Penify CLI tool.</p>
+<h1><a class="anchor" id="autotoc_md42"></a>
+Table of Contents</h1>
+<ul>
+<li>Penify CLI - Detailed Usage Guide<ul>
+<li>Table of Contents</li>
+<li>Authentication<ul>
+<li>Login Process</li>
+<li>API Token Storage</li>
+<li>Token Precedence</li>
+</ul>
+</li>
+<li>Command Overview</li>
+<li>Commit Message Generation</li>
+<li>Code Documentation Generation<ul>
+<li>Use Cases</li>
+<li>Authentication Requirement</li>
+</ul>
+</li>
+<li>Configuration Settings</li>
+<li>Git Hooks<ul>
+<li>Post-Commit Hook</li>
+<li>Custom Hook Location</li>
+</ul>
+</li>
+<li>Advanced Use Cases<ul>
+<li>CI/CD Integration</li>
+<li>Remote Repository Documentation</li>
+</ul>
+</li>
+<li>Troubleshooting<ul>
+<li>Common Issues</li>
+<li>Logs</li>
+<li>Support</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md43"></a>
+Authentication</h1>
+<h2><a class="anchor" id="autotoc_md44"></a>
+Login Process</h2>
+<p >When you run <code>penify login</code>, the tool:</p>
+<ol type="1">
+<li>Opens your default web browser</li>
+<li>Redirects you to Penify's login page</li>
+<li>Captures the authentication token after successful login</li>
+<li>Saves the token in <code>~/.penify</code> file</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md45"></a>
+API Token Storage</h2>
+<p >API tokens are stored in your home directory in the <code>.penify</code> file. This JSON file contains:</p>
+<div class="fragment"><div class="line">{</div>
+<div class="line">  &quot;api_keys&quot;: &quot;your-api-token&quot;,</div>
+<div class="line">  &quot;llm&quot;: { &quot;model&quot;: &quot;...&quot;, &quot;api_base&quot;: &quot;...&quot;, &quot;api_key&quot;: &quot;...&quot; },</div>
+<div class="line">  &quot;jira&quot;: { &quot;url&quot;: &quot;...&quot;, &quot;username&quot;: &quot;...&quot;, &quot;api_token&quot;: &quot;...&quot; }</div>
+<div class="line">}</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md46"></a>
+Token Precedence</h2>
+<ol type="1">
+<li>Environment variable <code>PENIFY_API_TOKEN</code> (highest priority)</li>
+<li>Token in <code>~/.penify</code> file</li>
+</ol>
+<h1><a class="anchor" id="autotoc_md47"></a>
+Command Overview</h1>
+<div class="fragment"><div class="line">penify</div>
+<div class="line">├── commit        Generate smart commit messages</div>
+<div class="line">├── config        Configure local LLM and JIRA</div>
+<div class="line">│   ├── llm       Configure local LLM settings</div>
+<div class="line">│   └── jira      Configure JIRA integration</div>
+<div class="line">├── login         Log in to Penify account</div>
+<div class="line">└── docgen        Generate code documentation</div>
+<div class="line">    ├── install-hook     Install Git post-commit hook</div>
+<div class="line">    └── uninstall-hook   Remove Git post-commit hook</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md48"></a>
+Commit Message Generation</h1>
+<p >The <code>commit</code> command analyzes your staged changes and generates meaningful commit messages. It can:</p>
+<ul>
+<li>Use a local LLM if configured</li>
+<li>Enhance messages with JIRA issue details</li>
+<li>Provide both title and description</li>
+</ul>
+<p >For specific options and examples, see <a class="el" href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html">docs/commit-commands.md</a>.</p>
+<h1><a class="anchor" id="autotoc_md49"></a>
+Code Documentation Generation</h1>
+<p >The <code>docgen</code> command generates documentation for your code:</p>
+<h2><a class="anchor" id="autotoc_md50"></a>
+Use Cases</h2>
+<ol type="1">
+<li><b>Current Git Diff</b>: Default behavior, documents only changed files</li>
+<li><b>Specific File</b>: Pass a file path with <code>-l path/to/file.py</code></li>
+<li><b>Entire Folder</b>: Pass a folder path with <code>-l path/to/folder</code></li>
+</ol>
+<h2><a class="anchor" id="autotoc_md51"></a>
+Authentication Requirement</h2>
+<p >This feature requires authentication with a Penify account. Run <code>penify login</code> before using documentation features.</p>
+<h1><a class="anchor" id="autotoc_md52"></a>
+Configuration Settings</h1>
+<p >Configure local settings using the <code>config</code> command:</p>
+<ul>
+<li><b>LLM Settings</b>: Configure a local LLM for commit message generation</li>
+<li><b>JIRA Settings</b>: Set up JIRA integration for enhanced commit messages</li>
+</ul>
+<p >For detailed configuration options, see <a class="el" href="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html">docs/config-commands.md</a>.</p>
+<h1><a class="anchor" id="autotoc_md53"></a>
+Git Hooks</h1>
+<p >Penify can install Git hooks to automate documentation generation:</p>
+<h2><a class="anchor" id="autotoc_md54"></a>
+Post-Commit Hook</h2>
+<ul>
+<li><b>Install</b>: <code>penify docgen install-hook</code></li>
+<li><b>What it does</b>: Automatically generates documentation for changed files after each commit</li>
+<li><b>Uninstall</b>: <code>penify docgen uninstall-hook</code></li>
+</ul>
+<h2><a class="anchor" id="autotoc_md55"></a>
+Custom Hook Location</h2>
+<p >You can specify a custom location for Git hooks:</p>
+<div class="fragment"><div class="line">penify docgen install-hook -l /path/to/git/repo</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md56"></a>
+Advanced Use Cases</h1>
+<h2><a class="anchor" id="autotoc_md57"></a>
+CI/CD Integration</h2>
+<p >For CI/CD pipelines:</p>
+<ol type="1">
+<li>Set <code>PENIFY_API_TOKEN</code> as an environment variable</li>
+<li>Run commands without requiring interactive login</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md58"></a>
+Remote Repository Documentation</h2>
+<p >Generate documentation for an entire repository:</p>
+<div class="fragment"><div class="line">git clone https://github.com/user/repo</div>
+<div class="line">cd repo</div>
+<div class="line">penify docgen -l .</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md59"></a>
+Troubleshooting</h1>
+<h2><a class="anchor" id="autotoc_md60"></a>
+Common Issues</h2>
+<ol type="1">
+<li><b>API Key Errors</b>: Ensure you've run <code>penify login</code> or set <code>PENIFY_API_TOKEN</code></li>
+<li><b>LLM Configuration</b>: Check your LLM settings with <code>cat ~/.penify</code></li>
+<li><b>JIRA Integration</b>: Verify JIRA credentials in your configuration</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md61"></a>
+Logs</h2>
+<p >For more detailed logs, you can set the environment variable:</p>
+<div class="fragment"><div class="line">export PENIFY_DEBUG=1</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md62"></a>
+Support</h2>
+<p >For additional help, visit <a href="https://docs.penify.dev/">https://docs.penify.dev/</a> or contact <a href="#" onclick="location.href='mai'+'lto:'+'sup'+'po'+'rt@'+'pe'+'nif'+'y.'+'dev'; return false;">suppo<span class="obfuscator">.nosp@m.</span>rt@p<span class="obfuscator">.nosp@m.</span>enify<span class="obfuscator">.nosp@m.</span>.dev</a> </p>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
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+  </ul>
+</div>
+</body>
+</html>
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+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI - Documentation Generation Commands </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p >This document provides a detailed guide to all permutations and combinations of the <code>docgen</code> command, including extensive information about Git hook commands for automating documentation generation.</p>
+<h1><a class="anchor" id="autotoc_md64"></a>
+Table of Contents</h1>
+<ul>
+<li>Basic Usage</li>
+<li>Command Options</li>
+<li>Option Combinations</li>
+<li>Git Hook Commands<ul>
+<li>Hook Installation</li>
+<li>Hook Customization</li>
+<li>Hook Uninstallation</li>
+</ul>
+</li>
+<li>Advanced Use Cases</li>
+<li>Troubleshooting</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md65"></a>
+Basic Usage</h1>
+<div class="fragment"><div class="line">penify docgen</div>
+</div><!-- fragment --><p >By default, this command:</p><ul>
+<li>Analyzes the current Git diff (changes since last commit)</li>
+<li>Generates documentation for changed files only</li>
+<li>Requires authentication via <code>penify login</code></li>
+</ul>
+<h1><a class="anchor" id="autotoc_md66"></a>
+Command Options</h1>
+<h2><a class="anchor" id="autotoc_md67"></a>
+&lt;tt&gt;-l, --location&lt;/tt&gt;</h2>
+<p >Specify a target for documentation generation:</p>
+<div class="fragment"><div class="line"># Generate documentation for a specific file</div>
+<div class="line">penify docgen -l path/to/file.py</div>
+<div class="line"> </div>
+<div class="line"># Generate documentation for a specific folder</div>
+<div class="line">penify docgen -l path/to/folder</div>
+</div><!-- fragment --><p >Without this flag, Penify analyzes only Git-tracked modified files.</p>
+<h2><a class="anchor" id="autotoc_md68"></a>
+Subcommands</h2>
+<h3><a class="anchor" id="autotoc_md69"></a>
+&lt;tt&gt;install-hook&lt;/tt&gt;</h3>
+<p >Install a Git post-commit hook to automatically generate documentation:</p>
+<div class="fragment"><div class="line">penify docgen install-hook</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md70"></a>
+&lt;tt&gt;uninstall-hook&lt;/tt&gt;</h3>
+<p >Remove the Git post-commit hook:</p>
+<div class="fragment"><div class="line">penify docgen uninstall-hook</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md71"></a>
+Option Combinations</h1>
+<h2><a class="anchor" id="autotoc_md72"></a>
+Generate Documentation for Current Git Diff</h2>
+<div class="fragment"><div class="line"># Basic usage - current Git diff</div>
+<div class="line">penify docgen</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md73"></a>
+Generate Documentation for a Specific File</h2>
+<div class="fragment"><div class="line"># Single file documentation</div>
+<div class="line">penify docgen -l src/main.py</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md74"></a>
+Generate Documentation for a Folder</h2>
+<div class="fragment"><div class="line"># Folder documentation</div>
+<div class="line">penify docgen -l src/models/</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md75"></a>
+Install Hook in Current Repository</h2>
+<div class="fragment"><div class="line"># Install hook in current Git repository</div>
+<div class="line">penify docgen install-hook</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md76"></a>
+Install Hook in Specific Repository</h2>
+<div class="fragment"><div class="line"># Install hook in a specific Git repository</div>
+<div class="line">penify docgen install-hook -l /path/to/repo</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md77"></a>
+Uninstall Hook from Current Repository</h2>
+<div class="fragment"><div class="line"># Uninstall hook from current Git repository</div>
+<div class="line">penify docgen uninstall-hook</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md78"></a>
+Uninstall Hook from Specific Repository</h2>
+<div class="fragment"><div class="line"># Uninstall hook from a specific Git repository</div>
+<div class="line">penify docgen uninstall-hook -l /path/to/repo</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md79"></a>
+Git Hook Commands</h1>
+<p >Penify provides Git hook commands to automate documentation generation as part of your Git workflow.</p>
+<h2><a class="anchor" id="autotoc_md80"></a>
+Hook Installation</h2>
+<h3><a class="anchor" id="autotoc_md81"></a>
+How Hooks Work</h3>
+<p >When you install a Git hook with <code>penify docgen install-hook</code>, Penify:</p>
+<ol type="1">
+<li>Creates a post-commit hook script in the <code>.git/hooks</code> directory</li>
+<li>Makes the script executable</li>
+<li>Configures the hook to run <code>penify docgen</code> after each commit</li>
+</ol>
+<h3><a class="anchor" id="autotoc_md82"></a>
+Hook Script Content</h3>
+<p >The generated post-commit hook contains:</p>
+<div class="fragment"><div class="line">#!/bin/sh</div>
+<div class="line"># This is a post-commit hook generated by penify.</div>
+<div class="line"># Automatically generates documentation for changed files after each commit.</div>
+<div class="line"> </div>
+<div class="line">penify docgen -gf /path/to/git/repository -t your_api_token</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md83"></a>
+Installation Location</h3>
+<p >By default, hooks are installed in the current Git repository. You can specify a different location:</p>
+<div class="fragment"><div class="line">penify docgen install-hook -l /path/to/repo</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md84"></a>
+Installation Requirements</h3>
+<p >To install hooks, you need:</p><ul>
+<li>A valid Penify API token (login first with <code>penify login</code>)</li>
+<li>Write permissions to the <code>.git/hooks</code> directory</li>
+</ul>
+<h3><a class="anchor" id="autotoc_md85"></a>
+Verifying Installation</h3>
+<p >After installation, you can verify that the hook is installed:</p>
+<div class="fragment"><div class="line">cat .git/hooks/post-commit</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md86"></a>
+Hook Customization</h2>
+<p >You can customize the post-commit hook after installation:</p>
+<h3><a class="anchor" id="autotoc_md87"></a>
+Modifying Hook Behavior</h3>
+<ol type="1">
+<li>Edit the <code>.git/hooks/post-commit</code> file</li>
+<li>Add additional options to the <code>penify docgen</code> command</li>
+<li>Add other commands to run after commit</li>
+</ol>
+<p >Example of a customized hook:</p>
+<div class="fragment"><div class="line">#!/bin/sh</div>
+<div class="line"># This is a post-commit hook generated by penify.</div>
+<div class="line"># Automatically generates documentation for changed files after each commit.</div>
+<div class="line"> </div>
+<div class="line"># Generate documentation</div>
+<div class="line">penify docgen -gf /path/to/git/repository -t your_api_token</div>
+<div class="line"> </div>
+<div class="line"># Additional custom commands</div>
+<div class="line">echo &quot;Documentation generation complete!&quot;</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md88"></a>
+Advanced Hook Scenarios</h3>
+<p ><b>Conditional Documentation Generation</b>:</p>
+<div class="fragment"><div class="line">#!/bin/sh</div>
+<div class="line"># Only generate documentation for commits to the main branch</div>
+<div class="line">BRANCH=$(git rev-parse --abbrev-ref HEAD)</div>
+<div class="line">if [ &quot;$BRANCH&quot; = &quot;main&quot; ]; then</div>
+<div class="line">  penify docgen -gf /path/to/git/repository -t your_api_token</div>
+<div class="line">fi</div>
+</div><!-- fragment --><p ><b>Documenting Specific Files/Folders</b>:</p>
+<div class="fragment"><div class="line">#!/bin/sh</div>
+<div class="line"># Only document Python files in the src directory</div>
+<div class="line">penify docgen -l src/ -gf /path/to/git/repository -t your_api_token</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md89"></a>
+Hook Uninstallation</h2>
+<h3><a class="anchor" id="autotoc_md90"></a>
+Standard Uninstallation</h3>
+<p >To remove a hook from the current repository:</p>
+<div class="fragment"><div class="line">penify docgen uninstall-hook</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md91"></a>
+Specific Repository Uninstallation</h3>
+<p >To remove a hook from a specific repository:</p>
+<div class="fragment"><div class="line">penify docgen uninstall-hook -l /path/to/repo</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md92"></a>
+Manual Hook Removal</h3>
+<p >If needed, you can manually remove the hook:</p>
+<div class="fragment"><div class="line">rm .git/hooks/post-commit</div>
+</div><!-- fragment --><h3><a class="anchor" id="autotoc_md93"></a>
+Verifying Uninstallation</h3>
+<p >Check that the hook was successfully removed:</p>
+<div class="fragment"><div class="line">ls -la .git/hooks/post-commit  # Should return &quot;No such file or directory&quot;</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md94"></a>
+Advanced Use Cases</h1>
+<h2><a class="anchor" id="autotoc_md95"></a>
+Continuous Integration</h2>
+<p >Run documentation generation in CI pipelines:</p>
+<div class="fragment"><div class="line"># In your CI script</div>
+<div class="line">export PENIFY_API_TOKEN=your_api_token</div>
+<div class="line">penify docgen -l src/</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md96"></a>
+Batch Documentation</h2>
+<p >Generate documentation for multiple repositories:</p>
+<div class="fragment"><div class="line"># Bash script for batch documentation</div>
+<div class="line">for repo in repo1 repo2 repo3; do</div>
+<div class="line">  cd /path/to/$repo</div>
+<div class="line">  penify docgen -l .</div>
+<div class="line">done</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md97"></a>
+Custom Git Hook Integration</h2>
+<p >Integrate with other Git hooks:</p>
+<div class="fragment"><div class="line"># In .git/hooks/pre-push</div>
+<div class="line">penify docgen -l src/</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md98"></a>
+Documenting Release Tags</h2>
+<p >Generate documentation when creating a release tag:</p>
+<div class="fragment"><div class="line"># Document everything when creating a tag</div>
+<div class="line">git tag -a v1.0.0</div>
+<div class="line">penify docgen -l .  # Document entire codebase</div>
+<div class="line">git commit --amend -m &quot;Release v1.0.0 with updated documentation&quot;</div>
+</div><!-- fragment --><h1><a class="anchor" id="autotoc_md99"></a>
+Troubleshooting</h1>
+<h2><a class="anchor" id="autotoc_md100"></a>
+Common Issues</h2>
+<ol type="1">
+<li>**"Authentication required"**<ul>
+<li>Run <code>penify login</code> before using documentation features</li>
+<li>Check your API token with <code>cat ~/.penify</code></li>
+</ul>
+</li>
+<li>**"Permission denied when installing hook"**<ul>
+<li>Check Git repository permissions</li>
+<li>Try running with sudo (if appropriate for your environment)</li>
+<li>Ensure the <code>.git/hooks</code> directory exists</li>
+</ul>
+</li>
+<li>**"Hook installed but not running"**<ul>
+<li>Check if the hook is executable: <code>ls -la .git/hooks/post-commit</code></li>
+<li>Make it executable if needed: <code>chmod +x .git/hooks/post-commit</code></li>
+<li>Check for syntax errors in the hook script</li>
+</ul>
+</li>
+<li>**"File or directory not found"**<ul>
+<li>Verify the path provided to the <code>-l</code> option</li>
+<li>Ensure you're running the command from the correct directory</li>
+</ul>
+</li>
+<li>**"Hook uninstallation failed"**<ul>
+<li>Check permissions on the <code>.git/hooks</code> directory</li>
+<li>Try manual removal: <code>rm .git/hooks/post-commit</code></li>
+</ul>
+</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md101"></a>
+Debugging</h2>
+<p >For detailed output when running documentation commands:</p>
+<div class="fragment"><div class="line">export PENIFY_DEBUG=1</div>
+<div class="line">penify docgen -l src/</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md102"></a>
+Getting Help</h2>
+<p >For command-specific help:</p>
+<div class="fragment"><div class="line">penify docgen --help</div>
+<div class="line">penify docgen install-hook --help</div>
+<div class="line">penify docgen uninstall-hook --help</div>
+</div><!-- fragment --> </div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html b/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html
new file mode 100644
index 0000000..4ca255e
--- /dev/null
+++ b/docs/html/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html
@@ -0,0 +1,239 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
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+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<!-- BEGIN opengraph metadata -->
+<meta property="og:title" content="penify-cli " />
+<meta property="og:image" content="https://repository-images.githubusercontent.com/348492097/4f16df80-88fb-11eb-9d31-4015ff22c452" />
+<meta property="og:description" content="penify-cli - Custom CSS theme for html-documentation with lots of customization parameters." />
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+<!-- END opengraph metadata -->
+<!-- BEGIN twitter metadata -->
+<meta name="twitter:image:src" content="https://repository-images.githubusercontent.com/348492097/4f16df80-88fb-11eb-9d31-4015ff22c452" />
+<meta name="twitter:title" content="Doxygen Awesome" />
+<meta name="twitter:description" content="Custom CSS theme for doxygen html-documentation with lots of customization parameters." />
+<!-- END twitter metadata -->
+<title>penify-cli: Penify CLI Example Workflows</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
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+/* @license-end */
+</script>
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+</iframe>
+</div>
+
+<div><div class="header">
+  <div class="headertitle"><div class="title">Penify CLI Example Workflows </div></div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><p >This document demonstrates how to use Penify CLI in real-world development workflows to improve your productivity.</p>
+<h1><a class="anchor" id="autotoc_md104"></a>
+Workflow 1: Efficient Git Commits with AI</h1>
+<h2><a class="anchor" id="autotoc_md105"></a>
+Setup</h2>
+<p >First, configure your local LLM for offline operation:</p>
+<div class="fragment"><div class="line">penify config llm</div>
+</div><!-- fragment --><p >Configure your JIRA integration for enhanced commit messages:</p>
+<div class="fragment"><div class="line">penify config jira</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md106"></a>
+Daily Workflow</h2>
+<ol type="1">
+<li>Make your code changes as usual</li>
+<li>When ready to commit, use Penify to generate a smart commit message:</li>
+</ol>
+<div class="fragment"><div class="line">penify commit</div>
+</div><!-- fragment --><ol type="1">
+<li>Review and confirm the generated commit message</li>
+<li>Git commit and push as usual</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md107"></a>
+Benefits</h2>
+<ul>
+<li>Consistent and descriptive commit messages</li>
+<li>Automatic inclusion of relevant JIRA ticket information</li>
+<li>Time saved from writing detailed commit messages</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md108"></a>
+Workflow 2: Documentation Generation Pipeline</h1>
+<h2><a class="anchor" id="autotoc_md109"></a>
+Setup</h2>
+<p >Login to Penify to access advanced documentation features:</p>
+<div class="fragment"><div class="line">penify login</div>
+</div><!-- fragment --><p >Install the Git hook for automatic documentation generation:</p>
+<div class="fragment"><div class="line">penify docgen install-hook</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md110"></a>
+Daily Workflow</h2>
+<ol type="1">
+<li>Make your code changes as usual</li>
+<li>Commit your changes</li>
+<li>Documentation is automatically generated for changed files</li>
+<li>Review the generated documentation</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md111"></a>
+Manual Documentation</h2>
+<p >For specific files or folders:</p>
+<div class="fragment"><div class="line">penify docgen -l src/components/authentication</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md112"></a>
+Benefits</h2>
+<ul>
+<li>Always up-to-date documentation</li>
+<li>Consistent documentation style</li>
+<li>Time saved from writing detailed documentation</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md113"></a>
+Workflow 3: Code Review Enhancement</h1>
+<h2><a class="anchor" id="autotoc_md114"></a>
+Setup</h2>
+<p >Ensure you're logged into Penify:</p>
+<div class="fragment"><div class="line">penify login</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md115"></a>
+Workflow</h2>
+<ol type="1">
+<li>Before submitting a PR, generate documentation for changed files:</li>
+</ol>
+<div class="fragment"><div class="line">penify docgen</div>
+</div><!-- fragment --><ol type="1">
+<li>Include the generated documentation in your PR</li>
+<li>Reviewers can better understand your changes with the AI-generated explanations</li>
+</ol>
+<h2><a class="anchor" id="autotoc_md116"></a>
+Benefits</h2>
+<ul>
+<li>Improved PR quality</li>
+<li>Faster code reviews</li>
+<li>Better team understanding of code changes</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md117"></a>
+Workflow 4: Onboarding New Team Members</h1>
+<h2><a class="anchor" id="autotoc_md118"></a>
+For Team Leads</h2>
+<p >Generate comprehensive documentation for the entire codebase:</p>
+<div class="fragment"><div class="line">penify docgen -l .</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md119"></a>
+For New Team Members</h2>
+<p >Generate focused documentation for components you're working on:</p>
+<div class="fragment"><div class="line">penify docgen -l src/components/my-feature</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md120"></a>
+Benefits</h2>
+<ul>
+<li>Faster onboarding</li>
+<li>Better understanding of code structure</li>
+<li>Reduced questions to senior team members</li>
+</ul>
+<h1><a class="anchor" id="autotoc_md121"></a>
+Workflow 5: Legacy Code Understanding</h1>
+<p >When working with unfamiliar legacy code:</p>
+<div class="fragment"><div class="line"># Document a specific complex file</div>
+<div class="line">penify docgen -l src/legacy/complex_module.py</div>
+<div class="line"> </div>
+<div class="line"># Document an entire legacy component</div>
+<div class="line">penify docgen -l src/legacy/old_component</div>
+</div><!-- fragment --><h2><a class="anchor" id="autotoc_md122"></a>
+Benefits</h2>
+<ul>
+<li>Quickly understand complex legacy systems</li>
+<li>Reduce time spent deciphering undocumented code</li>
+<li>Make safer changes to legacy systems </li>
+</ul>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
+</div>
+</body>
+</html>
diff --git a/docs/html/menu.js b/docs/html/menu.js
new file mode 100644
index 0000000..818b859
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+++ b/docs/html/menu.js
@@ -0,0 +1,135 @@
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+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+ DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
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+        if (link.substring(0,1)=='^') {
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+        }
+        result+='<li><a href="'+url+'">'+
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+                                makeTree(data.children[i],relPath)+'</li>';
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+      result+='</ul>';
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+    return result;
+  }
+  var searchBox;
+  if (searchEnabled) {
+    if (serverSide) {
+      searchBox='<div id="MSearchBox" class="MSearchBoxInactive">'+
+                 '<div class="left">'+
+                  '<form id="FSearchBox" action="'+relPath+searchPage+
+                    '" method="get"><img id="MSearchSelect" src="'+
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+/* @license-end */
diff --git a/docs/html/menudata.js b/docs/html/menudata.js
new file mode 100644
index 0000000..314c51a
--- /dev/null
+++ b/docs/html/menudata.js
@@ -0,0 +1,117 @@
+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+ DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
+*/
+var menudata={children:[
+{text:"Main Page",url:"index.html"},
+{text:"Related Pages",url:"pages.html"},
+{text:"Namespaces",url:"namespaces.html",children:[
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+{text:"Namespace Members",url:"namespacemembers.html",children:[
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+{text:"t",url:"namespacemembers.html#index_t"},
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+{text:"v",url:"namespacemembers.html#index_v"},
+{text:"w",url:"namespacemembers.html#index_w"}]},
+{text:"Functions",url:"namespacemembers_func.html",children:[
+{text:"c",url:"namespacemembers_func.html#index_c"},
+{text:"f",url:"namespacemembers_func.html#index_f"},
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+{text:"Class Index",url:"classes.html"},
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+{text:"Class Members",url:"functions.html",children:[
+{text:"All",url:"functions.html",children:[
+{text:"_",url:"functions.html#index__5F"},
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+{text:"u",url:"functions_func.html#index_u"}]},
+{text:"Variables",url:"functions_vars.html"}]}]},
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+{text:"File List",url:"files.html"}]}]}
diff --git a/docs/html/namespacemembers.html b/docs/html/namespacemembers.html
new file mode 100644
index 0000000..03dba31
--- /dev/null
+++ b/docs/html/namespacemembers.html
@@ -0,0 +1,289 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<meta name="viewport" content="width=device-width, initial-scale=1"/>
+<!-- BEGIN opengraph metadata -->
+<meta property="og:title" content="penify-cli " />
+<meta property="og:image" content="https://repository-images.githubusercontent.com/348492097/4f16df80-88fb-11eb-9d31-4015ff22c452" />
+<meta property="og:description" content="penify-cli - Custom CSS theme for html-documentation with lots of customization parameters." />
+<meta property="og:url" content="https://jothepro.github.io/doxygen-awesome-css/" />
+<!-- END opengraph metadata -->
+<!-- BEGIN twitter metadata -->
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+<meta name="twitter:title" content="Doxygen Awesome" />
+<meta name="twitter:description" content="Custom CSS theme for doxygen html-documentation with lots of customization parameters." />
+<!-- END twitter metadata -->
+<title>penify-cli: Namespace Members</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<link rel="icon" type="image/svg+xml" href="logo.drawio.svg"/>
+<script type="text/javascript" src="jquery.js"></script>
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+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" cellpadding="0">
+ <tbody>
+ <tr style="height: 56px;">
+  <td id="projectalign" style="padding-left: 0.5em;">
+   <div id="projectname">penify-cli
+   </div>
+  </td>
+ </tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part --><!-- Generated by Doxygen 1.9.4 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+var searchBox = new SearchBox("searchBox", "search",'Search','.html');
+/* @license-end */
+</script>
+<script type="text/javascript" src="menudata.js"></script>
+<script type="text/javascript" src="menu.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
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+  initMenu('',true,false,'search.php','Search');
+  $(document).ready(function() { init_search(); });
+});
+/* @license-end */
+</script>
+<div id="main-nav"></div>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
+  <div id="nav-tree">
+    <div id="nav-tree-contents">
+      <div id="nav-sync" class="sync"></div>
+    </div>
+  </div>
+  <div id="splitbar" style="-moz-user-select:none;" 
+       class="ui-resizable-handle">
+  </div>
+</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+$(document).ready(function(){initNavTree('namespacemembers.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
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+        name="MSearchResults" id="MSearchResults">
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+
+<div class="contents">
+<div class="textblock">Here is a list of all namespace members with links to the namespace documentation for each member:</div>
+
+<h3><a id="index_a" name="index_a"></a>- a -</h3><ul>
+<li>API_URL&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1constants.html#af198b5d1fc2f44657a2061aa324af3e0">penify_hook.constants</a></li>
+<li>author&#160;:&#160;<a class="el" href="namespacesetup.html#a3a57a4772d418a06835249cbade0d86a">setup</a></li>
+<li>author_email&#160;:&#160;<a class="el" href="namespacesetup.html#a5b08034343aa2be607722a8b315f3625">setup</a></li>
+<li>autoreset&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#ab560cfade398ac1e0bd47befb52d9f71">penify_hook.ui_utils</a></li>
+</ul>
+
+
+<h3><a id="index_c" name="index_c"></a>- c -</h3><ul>
+<li>classifiers&#160;:&#160;<a class="el" href="namespacesetup.html#abe96a9c38c1c61f9f0fdb002c482f785">setup</a></li>
+<li>commit_code()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html#a62564c4e8ad59fc46d56cb0f9122a71a">penify_hook.commands.commit_commands</a></li>
+<li>config_jira_web()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#af115198ea5d6808ccb98733957f50b06">penify_hook.commands.config_commands</a></li>
+<li>config_llm_web()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a185dfc34a655ed80e6c95939b6f3c35c">penify_hook.commands.config_commands</a></li>
+<li>create_progress_bar()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#a12b92532b1458af94f3649d411b5505c">penify_hook.ui_utils</a></li>
+<li>create_stage_progress_bar()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#a3da02cd1140179a9ce60f62c85fccfef">penify_hook.ui_utils</a></li>
+</ul>
+
+
+<h3><a id="index_d" name="index_d"></a>- d -</h3><ul>
+<li>DASHBOARD_URL&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1constants.html#a316c5a606e4440fb8224c6544c3a15f0">penify_hook.constants</a></li>
+<li>description&#160;:&#160;<a class="el" href="namespacesetup.html#aedf461ec52a946bda975938ba0b93ec0">setup</a></li>
+<li>docgen_description&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a3e42540047da37565afffeaf106cb948">penify_hook.commands.doc_commands</a></li>
+<li>DOTENV_AVAILABLE&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a152642ab83cf6219b604bda6122aba67">penify_hook.commands.config_commands</a></li>
+</ul>
+
+
+<h3><a id="index_e" name="index_e"></a>- e -</h3><ul>
+<li>entry_points&#160;:&#160;<a class="el" href="namespacesetup.html#ada7058afc98897f073d3f3b8b9157059">setup</a></li>
+<li>ERROR_COLOR&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#a4ab4e61dfab7973c87bef59c6e1977fe">penify_hook.ui_utils</a></li>
+<li>ERROR_SYMBOL&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#aa564e1e1d016c8227d076542e74cecb0">penify_hook.ui_utils</a></li>
+</ul>
+
+
+<h3><a id="index_f" name="index_f"></a>- f -</h3><ul>
+<li>find_git_parent()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1utils.html#a4ec5335a4026c22a34a3a8ccf665a5f2">penify_hook.utils</a></li>
+<li>format_error()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#a4dd934568897433fa73f9cc182ac4a3e">penify_hook.ui_utils</a></li>
+<li>format_file_path()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#af3441fb3c2c3850b8b3b6455a9fdaba4">penify_hook.ui_utils</a></li>
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+<h3><a id="index_g" name="index_g"></a>- g -</h3><ul>
+<li>generate_doc()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a4daac68bc563432bf25c85dc78081a25">penify_hook.commands.doc_commands</a></li>
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+<li>get_penify_config()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a6559a82d0bf727703d550d1003d3ed20">penify_hook.commands.config_commands</a></li>
+<li>get_repo_details()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1utils.html#ae236f3c4c8bf5dcddbb92b4c2065eea3">penify_hook.utils</a></li>
+<li>get_token()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a5503d51c905e2f1b299b12d2a73bd812">penify_hook.commands.config_commands</a></li>
+</ul>
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+<h3><a id="index_h" name="index_h"></a>- h -</h3><ul>
+<li>handle_commit()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html#af4f739f524c38b437e4e47673d683e23">penify_hook.commands.commit_commands</a></li>
+<li>handle_config()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1config__command.html#a240e5331681eb574ac319d7458783bde">penify_hook.config_command</a></li>
+<li>handle_docgen()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a2006ab13bff718ef783868a910c0b704">penify_hook.commands.doc_commands</a></li>
+<li>handle_login()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1login__command.html#ae4bf932fbafeff834b0a0c5a37f74ccd">penify_hook.login_command</a></li>
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+<li>install_requires&#160;:&#160;<a class="el" href="namespacesetup.html#abead4f26b530856f858f0d44c7cf2588">setup</a></li>
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+<li>long_description&#160;:&#160;<a class="el" href="namespacesetup.html#a4cda9dbfb952875376a0749fe08a5bde">setup</a></li>
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+<li>main()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1main.html#a16838b20df4bd14ee4b5e1dd2906738f">penify_hook.main</a></li>
+</ul>
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+<li>print_error()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1ui__utils.html#a6f0acd7dd91abfe67d0807803bc3b65f">penify_hook.ui_utils</a></li>
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+<li>python_requires&#160;:&#160;<a class="el" href="namespacesetup.html#aa7ca7bc9391b217e81efeb03689d8dbf">setup</a></li>
+</ul>
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+<h3><a id="index_r" name="index_r"></a>- r -</h3><ul>
+<li>recursive_search_git_folder()&#160;:&#160;<a class="el" href="namespacepenify__hook_1_1utils.html#a95c3f9c80860d6a2e2d061d2fb660a3f">penify_hook.utils</a></li>
+</ul>
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+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commands.auth_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:aa3956ca1749d4218ea1dc6e5b6218b24"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1auth__commands.html#aa3956ca1749d4218ea1dc6e5b6218b24">save_credentials</a> (api_key)</td></tr>
+<tr class="separator:aa3956ca1749d4218ea1dc6e5b6218b24"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a78f375c58bb6f69f98675e6a9ac84655"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1auth__commands.html#a78f375c58bb6f69f98675e6a9ac84655">login</a> (api_url, dashboard_url)</td></tr>
+<tr class="separator:a78f375c58bb6f69f98675e6a9ac84655"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a78f375c58bb6f69f98675e6a9ac84655" name="a78f375c58bb6f69f98675e6a9ac84655"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a78f375c58bb6f69f98675e6a9ac84655">&#9670;&nbsp;</a></span>login()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.auth_commands.login </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_url</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>dashboard_url</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Open the login page in a web browser and capture the token via redirect.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
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+
+<div class="memitem">
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+        <tr>
+          <td class="memname">def penify_hook.commands.auth_commands.save_credentials </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_key</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Save the API key in a priority-based manner.
+
+This function attempts to save the API key in two locations, based on priority:
+1. In a `.env` file located in the root of the Git repository if one is found.
+2. In a global `.penify` file located in the user's home directory as a
+fallback.  The function first tries to locate the Git repository using
+`recursive_search_git_folder`. If a Git repository is found, it reads the
+existing `.env` file (if present), updates or adds the API key under the key
+`PENIFY_API_TOKEN`, and writes the updated content back. If any error occurs
+during this process, it falls back to saving the credentials in the global
+`.penify` file. The function handles exceptions and prints appropriate error
+messages.
+
+Args:
+    api_key (str): The API key to save.
+
+Returns:
+    bool: True if the API key is saved successfully, False otherwise.
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+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commands.commit_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a62564c4e8ad59fc46d56cb0f9122a71a"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html#a62564c4e8ad59fc46d56cb0f9122a71a">commit_code</a> (api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)</td></tr>
+<tr class="separator:a62564c4e8ad59fc46d56cb0f9122a71a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a8627583116eb78e31a4d3cdc16d2f15c"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html#a8627583116eb78e31a4d3cdc16d2f15c">setup_commit_parser</a> (parser)</td></tr>
+<tr class="separator:a8627583116eb78e31a4d3cdc16d2f15c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af4f739f524c38b437e4e47673d683e23"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html#af4f739f524c38b437e4e47673d683e23">handle_commit</a> (args)</td></tr>
+<tr class="separator:af4f739f524c38b437e4e47673d683e23"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a62564c4e8ad59fc46d56cb0f9122a71a" name="a62564c4e8ad59fc46d56cb0f9122a71a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a62564c4e8ad59fc46d56cb0f9122a71a">&#9670;&nbsp;</a></span>commit_code()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.commit_commands.commit_code </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_url</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>open_terminal</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>generate_description</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>llm_model</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>llm_api_base</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>llm_api_key</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>jira_url</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>jira_user</em> = <code>None</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>jira_api_token</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Enhance Git commits with AI-powered commit messages.
+
+This function allows for the generation of enhanced commit messages using
+natural language processing models and optionally integrates with JIRA for
+additional context. It processes the current Git folder to find relevant files
+and generates a detailed commit message based on the provided parameters.
+
+Args:
+    api_url (str): URL of the API endpoint.
+    token (str): Authentication token for the API.
+    message (str): Initial commit message provided by the user.
+    open_terminal (bool): Whether to open the terminal after committing.
+    generate_description (bool): Whether to generate a detailed description in the commit message.
+    llm_model (str?): The language model to use for generating the commit message. Defaults to None.
+    llm_api_base (str?): Base URL of the LLM API. Defaults to None.
+    llm_api_key (str?): API key for accessing the LLM service. Defaults to None.
+    jira_url (str?): URL of the JIRA instance. Defaults to None.
+    jira_user (str?): Username for authenticating with JIRA. Defaults to None.
+    jira_api_token (str?): API token for accessing JIRA. Defaults to None.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_cgraph.svg" width="100%" height="494"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
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+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="af4f739f524c38b437e4e47673d683e23" name="af4f739f524c38b437e4e47673d683e23"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af4f739f524c38b437e4e47673d683e23">&#9670;&nbsp;</a></span>handle_commit()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.commit_commands.handle_commit </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>args</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Handle commit functionality by processing arguments and invoking the
+appropriate commands.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_cgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_icgraph.svg" width="512" height="142"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a8627583116eb78e31a4d3cdc16d2f15c" name="a8627583116eb78e31a4d3cdc16d2f15c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a8627583116eb78e31a4d3cdc16d2f15c">&#9670;&nbsp;</a></span>setup_commit_parser()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.commit_commands.setup_commit_parser </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>parser</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Sets up an argument parser for generating smart commit messages.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1commit__commands_a8627583116eb78e31a4d3cdc16d2f15c_icgraph.svg" width="528" height="142"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
+<!-- start footer part -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="namespacepenify__hook.html">penify_hook</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1commands.html">commands</a></li><li class="navelem"><a class="el" href="namespacepenify__hook_1_1commands_1_1commit__commands.html">commit_commands</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
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+<a href="#func-members">Functions</a> &#124;
+<a href="#var-members">Variables</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commands.config_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:aabe277132ce0bc0aacef951cf1dee2ae"><td class="memItemLeft" align="right" valign="top">None&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#aabe277132ce0bc0aacef951cf1dee2ae">load_env_files</a> ()</td></tr>
+<tr class="separator:aabe277132ce0bc0aacef951cf1dee2ae"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6559a82d0bf727703d550d1003d3ed20"><td class="memItemLeft" align="right" valign="top">Path&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a6559a82d0bf727703d550d1003d3ed20">get_penify_config</a> ()</td></tr>
+<tr class="separator:a6559a82d0bf727703d550d1003d3ed20"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3caf2b062dd33b1f1d7ddc7224f0ff87"><td class="memItemLeft" align="right" valign="top">Any&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a3caf2b062dd33b1f1d7ddc7224f0ff87">get_env_var_or_default</a> (str env_var, Any default=None)</td></tr>
+<tr class="separator:a3caf2b062dd33b1f1d7ddc7224f0ff87"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4617bc5956e502c9555dc0dda0376df4"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a4617bc5956e502c9555dc0dda0376df4">save_llm_config</a> (model, api_base, api_key)</td></tr>
+<tr class="separator:a4617bc5956e502c9555dc0dda0376df4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab2486ac2bf16b4a671e49625bfa4f9b4"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#ab2486ac2bf16b4a671e49625bfa4f9b4">save_jira_config</a> (url, username, api_token)</td></tr>
+<tr class="separator:ab2486ac2bf16b4a671e49625bfa4f9b4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6492bc8e7df6e38bb06ad05e572d4cc0"><td class="memItemLeft" align="right" valign="top">Dict[str, str]&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a6492bc8e7df6e38bb06ad05e572d4cc0">get_llm_config</a> ()</td></tr>
+<tr class="separator:a6492bc8e7df6e38bb06ad05e572d4cc0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a15bf3685c4dcb5c15ba6a4055e484cf2"><td class="memItemLeft" align="right" valign="top">Dict[str, str]&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a15bf3685c4dcb5c15ba6a4055e484cf2">get_jira_config</a> ()</td></tr>
+<tr class="separator:a15bf3685c4dcb5c15ba6a4055e484cf2"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a185dfc34a655ed80e6c95939b6f3c35c"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a185dfc34a655ed80e6c95939b6f3c35c">config_llm_web</a> ()</td></tr>
+<tr class="separator:a185dfc34a655ed80e6c95939b6f3c35c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af115198ea5d6808ccb98733957f50b06"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#af115198ea5d6808ccb98733957f50b06">config_jira_web</a> ()</td></tr>
+<tr class="separator:af115198ea5d6808ccb98733957f50b06"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a5503d51c905e2f1b299b12d2a73bd812"><td class="memItemLeft" align="right" valign="top">Optional[str]&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a5503d51c905e2f1b299b12d2a73bd812">get_token</a> ()</td></tr>
+<tr class="separator:a5503d51c905e2f1b299b12d2a73bd812"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:a152642ab83cf6219b604bda6122aba67"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a152642ab83cf6219b604bda6122aba67">DOTENV_AVAILABLE</a> = True</td></tr>
+<tr class="separator:a152642ab83cf6219b604bda6122aba67"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4b202072a3a3b8515c9c254622e9c880"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1config__commands.html#a4b202072a3a3b8515c9c254622e9c880">path</a></td></tr>
+<tr class="separator:a4b202072a3a3b8515c9c254622e9c880"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="af115198ea5d6808ccb98733957f50b06" name="af115198ea5d6808ccb98733957f50b06"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af115198ea5d6808ccb98733957f50b06">&#9670;&nbsp;</a></span>config_jira_web()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.config_commands.config_jira_web </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Starts a web server for configuring JIRA settings.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_cgraph.svg" width="100%" height="462"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_icgraph.svg" width="100%" height="412"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a185dfc34a655ed80e6c95939b6f3c35c" name="a185dfc34a655ed80e6c95939b6f3c35c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a185dfc34a655ed80e6c95939b6f3c35c">&#9670;&nbsp;</a></span>config_llm_web()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.config_commands.config_llm_web </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Starts an HTTP server for configuring LLM settings via a web interface.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a185dfc34a655ed80e6c95939b6f3c35c_icgraph.svg" width="100%" height="412"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a3caf2b062dd33b1f1d7ddc7224f0ff87" name="a3caf2b062dd33b1f1d7ddc7224f0ff87"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3caf2b062dd33b1f1d7ddc7224f0ff87">&#9670;&nbsp;</a></span>get_env_var_or_default()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Any penify_hook.commands.config_commands.get_env_var_or_default </td>
+          <td>(</td>
+          <td class="paramtype">str&#160;</td>
+          <td class="paramname"><em>env_var</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">Any &#160;</td>
+          <td class="paramname"><em>default</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Get environment variable or return default value.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a3caf2b062dd33b1f1d7ddc7224f0ff87_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a15bf3685c4dcb5c15ba6a4055e484cf2" name="a15bf3685c4dcb5c15ba6a4055e484cf2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a15bf3685c4dcb5c15ba6a4055e484cf2">&#9670;&nbsp;</a></span>get_jira_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Dict[str, str] penify_hook.commands.config_commands.get_jira_config </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieve JIRA configuration from environment variables.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_icgraph.svg" width="100%" height="504"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a6492bc8e7df6e38bb06ad05e572d4cc0" name="a6492bc8e7df6e38bb06ad05e572d4cc0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6492bc8e7df6e38bb06ad05e572d4cc0">&#9670;&nbsp;</a></span>get_llm_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Dict[str, str] penify_hook.commands.config_commands.get_llm_config </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieve LLM configuration from environment variables.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_cgraph.svg" width="100%" height="418"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_icgraph.svg" width="100%" height="556"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a6559a82d0bf727703d550d1003d3ed20" name="a6559a82d0bf727703d550d1003d3ed20"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6559a82d0bf727703d550d1003d3ed20">&#9670;&nbsp;</a></span>get_penify_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Path penify_hook.commands.config_commands.get_penify_config </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Returns the path to the `config.json` file within the `.penify` directory,
+creating it if necessary.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_cgraph.svg" width="476" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a5503d51c905e2f1b299b12d2a73bd812" name="a5503d51c905e2f1b299b12d2a73bd812"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5503d51c905e2f1b299b12d2a73bd812">&#9670;&nbsp;</a></span>get_token()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> Optional[str] penify_hook.commands.config_commands.get_token </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Retrieves an API token using a prioritized method.
+
+This function first attempts to load environment variables from all `.env`
+files and checks if the `PENIFY_API_TOKEN` environment variable is set. If
+found, it returns the token. If not, it looks for the API key in a
+configuration file named 'api_keys'. If both methods fail, it returns None.
+
+Returns:
+    str or None: The API token if found, otherwise None.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_cgraph.svg" width="100%" height="467"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="aabe277132ce0bc0aacef951cf1dee2ae" name="aabe277132ce0bc0aacef951cf1dee2ae"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aabe277132ce0bc0aacef951cf1dee2ae">&#9670;&nbsp;</a></span>load_env_files()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname"> None penify_hook.commands.config_commands.load_env_files </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Load environment variables from .env files in various locations with proper
+priority.
+
+This function loads environment variables from .env files located in different
+directories, prioritizing the current directory over the Git repo root and the
+user home directory. The loading process ensures that later files override
+earlier ones.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_cgraph.svg" width="476" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ab2486ac2bf16b4a671e49625bfa4f9b4" name="ab2486ac2bf16b4a671e49625bfa4f9b4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab2486ac2bf16b4a671e49625bfa4f9b4">&#9670;&nbsp;</a></span>save_jira_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.config_commands.save_jira_config </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>url</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>username</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_token</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Save JIRA configuration settings to a .env file.
+
+This function saves JIRA configuration following these steps: 1. Determine the
+target .env file location based on whether the current directory is inside a
+Git repository. 2. If inside a Git repo, use the Git repo root's .env file;
+otherwise, use the user home directory's .env file. 3. Read the existing
+content of the .env file (if it exists) to preserve other settings. 4. Update
+the .env content with the new JIRA configuration. 5. Write the updated content
+back to the .env file. 6. Optionally, reload environment variables to make
+changes immediately available.
+
+Args:
+    url (str): The JIRA URL to be saved in the .env file.
+    username (str): The JIRA username to be saved in the .env file.
+    api_token (str): The JIRA API token to be saved in the .env file.
+
+Returns:
+    bool: True if the configuration was successfully saved, False otherwise.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1config__commands_ab2486ac2bf16b4a671e49625bfa4f9b4_cgraph.svg" width="476" height="76"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
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+</div>
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+
+</div>
+</div>
+<a id="a4617bc5956e502c9555dc0dda0376df4" name="a4617bc5956e502c9555dc0dda0376df4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4617bc5956e502c9555dc0dda0376df4">&#9670;&nbsp;</a></span>save_llm_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.config_commands.save_llm_config </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>model</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_base</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_key</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Save LLM configuration settings to an .env file.
+
+This function saves the LLM configuration following a specific priority: 1. Git
+repo root .env (if inside a git repo) 2. User home directory .env  It handles
+the detection of the Git repo root, reads the existing .env content, updates it
+with the new LLM configuration, and writes it back to the file. It also reloads
+the environment variables to make changes immediately available.
+
+Args:
+    model (str): The name of the language model.
+    api_base (str): The base URL for the API.
+    api_key (str): The API key for authentication.
+
+Returns:
+    bool: True if the configuration is saved successfully, False otherwise.
+</pre> <div class="dynheader">
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+</div>
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+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Variable Documentation</h2>
+<a id="a152642ab83cf6219b604bda6122aba67" name="a152642ab83cf6219b604bda6122aba67"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a152642ab83cf6219b604bda6122aba67">&#9670;&nbsp;</a></span>DOTENV_AVAILABLE</h2>
+
+<div class="memitem">
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+        <tr>
+          <td class="memname">bool penify_hook.commands.config_commands.DOTENV_AVAILABLE = True</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a4b202072a3a3b8515c9c254622e9c880">&#9670;&nbsp;</a></span>path</h2>
+
+<div class="memitem">
+<div class="memproto">
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+          <td class="memname">penify_hook.commands.config_commands.path</td>
+        </tr>
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+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a> &#124;
+<a href="#var-members">Variables</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commands.doc_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a4daac68bc563432bf25c85dc78081a25"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a4daac68bc563432bf25c85dc78081a25">generate_doc</a> (api_url, token, location=None)</td></tr>
+<tr class="separator:a4daac68bc563432bf25c85dc78081a25"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:acc7f4ead1b11951d885fa5c151c2cbe0"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#acc7f4ead1b11951d885fa5c151c2cbe0">setup_docgen_parser</a> (parser)</td></tr>
+<tr class="separator:acc7f4ead1b11951d885fa5c151c2cbe0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a2006ab13bff718ef783868a910c0b704"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a2006ab13bff718ef783868a910c0b704">handle_docgen</a> (args)</td></tr>
+<tr class="separator:a2006ab13bff718ef783868a910c0b704"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:a3e42540047da37565afffeaf106cb948"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1doc__commands.html#a3e42540047da37565afffeaf106cb948">docgen_description</a></td></tr>
+<tr class="separator:a3e42540047da37565afffeaf106cb948"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a4daac68bc563432bf25c85dc78081a25" name="a4daac68bc563432bf25c85dc78081a25"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4daac68bc563432bf25c85dc78081a25">&#9670;&nbsp;</a></span>generate_doc()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.doc_commands.generate_doc </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>api_url</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>location</em> = <code>None</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generates documentation based on the given parameters.
+
+This function initializes an API client using the provided API URL and token.
+It then generates documentation by analyzing the specified location, which can
+be a folder, a file, or the current working directory if no location is
+provided. The function handles different types of analysis based on the input
+location and reports any errors encountered during the process.
+
+Args:
+    api_url (str): The URL of the API to connect to for documentation generation.
+    token (str): The authentication token for accessing the API.
+    location (str?): The path to a specific file or folder to analyze. If not provided,
+        the current working directory is used.
+</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1doc__commands_a4daac68bc563432bf25c85dc78081a25_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a2006ab13bff718ef783868a910c0b704" name="a2006ab13bff718ef783868a910c0b704"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2006ab13bff718ef783868a910c0b704">&#9670;&nbsp;</a></span>handle_docgen()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.doc_commands.handle_docgen </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>args</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Handle document generation and hook management based on subcommands.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_cgraph.svg" width="100%" height="498"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_icgraph.svg" width="492" height="324"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="acc7f4ead1b11951d885fa5c151c2cbe0" name="acc7f4ead1b11951d885fa5c151c2cbe0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#acc7f4ead1b11951d885fa5c151c2cbe0">&#9670;&nbsp;</a></span>setup_docgen_parser()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.doc_commands.setup_docgen_parser </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>parser</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Configure a parser for generating documentation using Git commands.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1doc__commands_acc7f4ead1b11951d885fa5c151c2cbe0_icgraph.svg" width="523" height="128"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Variable Documentation</h2>
+<a id="a3e42540047da37565afffeaf106cb948" name="a3e42540047da37565afffeaf106cb948"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3e42540047da37565afffeaf106cb948">&#9670;&nbsp;</a></span>docgen_description</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">string penify_hook.commands.doc_commands.docgen_description</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<b>Initial value:</b><div class="fragment"><div class="line"><span class="lineno">    1</span>=  <span class="stringliteral">&quot;&quot;&quot;Generate code documentation using Penify.</span></div>
+<div class="line"><span class="lineno">    2</span><span class="stringliteral"></span> </div>
+<div class="line"><span class="lineno">    3</span><span class="stringliteral">This command requires you to be logged in to your Penify account.</span></div>
+<div class="line"><span class="lineno">    4</span><span class="stringliteral">You can generate documentation for:</span></div>
+<div class="line"><span class="lineno">    5</span><span class="stringliteral">- Current Git diff (default)</span></div>
+<div class="line"><span class="lineno">    6</span><span class="stringliteral">- Specific file</span></div>
+<div class="line"><span class="lineno">    7</span><span class="stringliteral">- Specific folder</span></div>
+<div class="line"><span class="lineno">    8</span><span class="stringliteral">&quot;&quot;&quot;</span></div>
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+
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a> &#124;
+<a href="#var-members">Variables</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.commands.hook_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:adff8f5d3bf1c3795974a391ee95b72b2"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1hook__commands.html#adff8f5d3bf1c3795974a391ee95b72b2">install_git_hook</a> (location, token)</td></tr>
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+<tr class="memitem:a81543eb5fa835fd1237f24e8bce6201d"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1hook__commands.html#a81543eb5fa835fd1237f24e8bce6201d">uninstall_git_hook</a> (location)</td></tr>
+<tr class="separator:a81543eb5fa835fd1237f24e8bce6201d"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
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+<tr class="memitem:ae82fd46e5a9219da1478b0476b8214b1"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1hook__commands.html#ae82fd46e5a9219da1478b0476b8214b1">HOOK_FILENAME</a> = &quot;post-commit&quot;</td></tr>
+<tr class="separator:ae82fd46e5a9219da1478b0476b8214b1"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6a45aad71c8d32ce11a6dff8cee8bee7"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1commands_1_1hook__commands.html#a6a45aad71c8d32ce11a6dff8cee8bee7">HOOK_TEMPLATE</a></td></tr>
+<tr class="separator:a6a45aad71c8d32ce11a6dff8cee8bee7"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="adff8f5d3bf1c3795974a391ee95b72b2" name="adff8f5d3bf1c3795974a391ee95b72b2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adff8f5d3bf1c3795974a391ee95b72b2">&#9670;&nbsp;</a></span>install_git_hook()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.commands.hook_commands.install_git_hook </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>location</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>token</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Install a post-commit Git hook that generates documentation for changed files.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1commands_1_1hook__commands_adff8f5d3bf1c3795974a391ee95b72b2_icgraph.svg" width="100%" height="543"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a81543eb5fa835fd1237f24e8bce6201d" name="a81543eb5fa835fd1237f24e8bce6201d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a81543eb5fa835fd1237f24e8bce6201d">&#9670;&nbsp;</a></span>uninstall_git_hook()</h2>
+
+<div class="memitem">
+<div class="memproto">
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+        <tr>
+          <td class="memname">def penify_hook.commands.hook_commands.uninstall_git_hook </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>location</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Uninstalls the post-commit hook from the specified location.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
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+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Variable Documentation</h2>
+<a id="ae82fd46e5a9219da1478b0476b8214b1" name="ae82fd46e5a9219da1478b0476b8214b1"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae82fd46e5a9219da1478b0476b8214b1">&#9670;&nbsp;</a></span>HOOK_FILENAME</h2>
+
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+          <td class="memname">string penify_hook.commands.hook_commands.HOOK_FILENAME = &quot;post-commit&quot;</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a6a45aad71c8d32ce11a6dff8cee8bee7">&#9670;&nbsp;</a></span>HOOK_TEMPLATE</h2>
+
+<div class="memitem">
+<div class="memproto">
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+          <td class="memname">string penify_hook.commands.hook_commands.HOOK_TEMPLATE</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<b>Initial value:</b><div class="fragment"><div class="line"><span class="lineno">    1</span>=  <span class="stringliteral">&quot;&quot;&quot;#!/bin/sh</span></div>
+<div class="line"><span class="lineno">    2</span><span class="stringliteral"># This is a post-commit hook generated by penify.</span></div>
+<div class="line"><span class="lineno">    3</span><span class="stringliteral"># Automatically generates documentation for changed files after each commit.</span></div>
+<div class="line"><span class="lineno">    4</span><span class="stringliteral"></span> </div>
+<div class="line"><span class="lineno">    5</span><span class="stringliteral">penify docgen -gf {git_folder_path} -t {token}</span></div>
+<div class="line"><span class="lineno">    6</span><span class="stringliteral">&quot;&quot;&quot;</span></div>
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+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.config_command Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
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+<tr class="memitem:a4f3eb92164a69df1446d745f8a09285e"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1config__command.html#a4f3eb92164a69df1446d745f8a09285e">setup_config_parser</a> (parent_parser)</td></tr>
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+<tr class="memitem:a240e5331681eb574ac319d7458783bde"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1config__command.html#a240e5331681eb574ac319d7458783bde">handle_config</a> (args)</td></tr>
+<tr class="separator:a240e5331681eb574ac319d7458783bde"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
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+<h2 class="memtitle"><span class="permalink"><a href="#a240e5331681eb574ac319d7458783bde">&#9670;&nbsp;</a></span>handle_config()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.config_command.handle_config </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>args</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Handle configuration settings based on the specified config type.
+
+This function processes different types of configurations such as LLM (Language
+Model) and JIRA. It saves configurations, sets up web-based configurations, and
+verifies JIRA connections. Depending on the `args.config_type`, it imports
+necessary modules, handles configuration saving or setup, and optionally
+verifies JIRA connectivity.
+
+Args:
+    args (argparse.Namespace): Command-line arguments containing the type of configuration to handle.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_cgraph.svg" width="100%" height="508"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
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+</div>
+</div>
+
+</div>
+</div>
+<a id="a4f3eb92164a69df1446d745f8a09285e" name="a4f3eb92164a69df1446d745f8a09285e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4f3eb92164a69df1446d745f8a09285e">&#9670;&nbsp;</a></span>setup_config_parser()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.config_command.setup_config_parser </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>parent_parser</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Set up configuration parsers with subcommands for LLM and JIRA settings.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
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+</div>
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+
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+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
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+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.login_command Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:aae63db4c484797bead34b7d874020c6a"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1login__command.html#aae63db4c484797bead34b7d874020c6a">setup_login_parser</a> (parser)</td></tr>
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+          <td class="memname">def penify_hook.login_command.handle_login </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>args</em></td><td>)</td>
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+          <td class="paramname"><em>parser</em></td><td>)</td>
+          <td></td>
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+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">penify_hook.main Namespace Reference</div></div>
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+Functions</h2></td></tr>
+<tr class="memitem:a16838b20df4bd14ee4b5e1dd2906738f"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1main.html#a16838b20df4bd14ee4b5e1dd2906738f">main</a> ()</td></tr>
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+<h2 class="memtitle"><span class="permalink"><a href="#a16838b20df4bd14ee4b5e1dd2906738f">&#9670;&nbsp;</a></span>main()</h2>
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+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
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+<pre class="fragment">Main function to handle command-line interface (CLI) interactions with Penify
+services.
+
+This tool provides a command-line interface for generating smart commit
+messages, configuring local-LLM and JIRA, and generating code documentation. It
+supports basic commands that do not require login and advanced commands that
+require user authentication. The `--version` flag can be used to display the
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+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="var-members" name="var-members"></a>
+Variables</h2></td></tr>
+<tr class="memitem:ab560cfade398ac1e0bd47befb52d9f71"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#ab560cfade398ac1e0bd47befb52d9f71">autoreset</a></td></tr>
+<tr class="separator:ab560cfade398ac1e0bd47befb52d9f71"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a9fdcb180915696f5d217032a62c3857c"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a9fdcb180915696f5d217032a62c3857c">INFO_COLOR</a> = Fore.CYAN</td></tr>
+<tr class="separator:a9fdcb180915696f5d217032a62c3857c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a22c450c5e2b5394618ecf9b636560df4"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a22c450c5e2b5394618ecf9b636560df4">SUCCESS_COLOR</a> = Fore.GREEN</td></tr>
+<tr class="separator:a22c450c5e2b5394618ecf9b636560df4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a177bc9b44157844c999e0c1c2c6936ff"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a177bc9b44157844c999e0c1c2c6936ff">WARNING_COLOR</a> = Fore.YELLOW</td></tr>
+<tr class="separator:a177bc9b44157844c999e0c1c2c6936ff"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4ab4e61dfab7973c87bef59c6e1977fe"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a4ab4e61dfab7973c87bef59c6e1977fe">ERROR_COLOR</a> = Fore.RED</td></tr>
+<tr class="separator:a4ab4e61dfab7973c87bef59c6e1977fe"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aba01b8259f0d66cdc2b4a1b58f9736fc"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#aba01b8259f0d66cdc2b4a1b58f9736fc">HIGHLIGHT_COLOR</a> = Fore.BLUE</td></tr>
+<tr class="separator:aba01b8259f0d66cdc2b4a1b58f9736fc"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aca0fcee81606857497520ae4290bc9f5"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#aca0fcee81606857497520ae4290bc9f5">NEUTRAL_COLOR</a> = Fore.WHITE</td></tr>
+<tr class="separator:aca0fcee81606857497520ae4290bc9f5"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3c6fe4bd17c1a5fe76587225ae4beb3e"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a3c6fe4bd17c1a5fe76587225ae4beb3e">SUCCESS_SYMBOL</a> = &quot;✓&quot;</td></tr>
+<tr class="separator:a3c6fe4bd17c1a5fe76587225ae4beb3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a6eaea98f1a8cbe16a181647da2fc0a16"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a6eaea98f1a8cbe16a181647da2fc0a16">WARNING_SYMBOL</a> = &quot;○&quot;</td></tr>
+<tr class="separator:a6eaea98f1a8cbe16a181647da2fc0a16"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aa564e1e1d016c8227d076542e74cecb0"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#aa564e1e1d016c8227d076542e74cecb0">ERROR_SYMBOL</a> = &quot;✗&quot;</td></tr>
+<tr class="separator:aa564e1e1d016c8227d076542e74cecb0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a3b208e2750a38dd09467a73e4afd9756"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepenify__hook_1_1ui__utils.html#a3b208e2750a38dd09467a73e4afd9756">PROCESSING_SYMBOL</a> = &quot;⟳&quot;</td></tr>
+<tr class="separator:a3b208e2750a38dd09467a73e4afd9756"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
+<div class="textblock"><pre class="fragment">UI utilities for Penify CLI.
+
+This module provides utility functions for consistent UI formatting,
+colored output, and progress indicators across the Penify CLI application.
+</pre> </div><h2 class="groupheader">Function Documentation</h2>
+<a id="a12b92532b1458af94f3649d411b5505c" name="a12b92532b1458af94f3649d411b5505c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a12b92532b1458af94f3649d411b5505c">&#9670;&nbsp;</a></span>create_progress_bar()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.create_progress_bar </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>total</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>desc</em> = <code>&quot;Processing&quot;</code>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>unit</em> = <code>&quot;item&quot;</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Create a tqdm progress bar with consistent styling.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_cgraph.svg" width="488" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_icgraph.svg" width="444" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a3da02cd1140179a9ce60f62c85fccfef" name="a3da02cd1140179a9ce60f62c85fccfef"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3da02cd1140179a9ce60f62c85fccfef">&#9670;&nbsp;</a></span>create_stage_progress_bar()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.create_stage_progress_bar </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>stages</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>desc</em> = <code>&quot;Processing&quot;</code>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Create a tqdm progress bar for processing stages with consistent styling.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_cgraph.svg" width="488" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_icgraph.svg" width="447" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a4dd934568897433fa73f9cc182ac4a3e" name="a4dd934568897433fa73f9cc182ac4a3e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4dd934568897433fa73f9cc182ac4a3e">&#9670;&nbsp;</a></span>format_error()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_error </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format an error message with the specified error color.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a4dd934568897433fa73f9cc182ac4a3e_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="af3441fb3c2c3850b8b3b6455a9fdaba4" name="af3441fb3c2c3850b8b3b6455a9fdaba4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af3441fb3c2c3850b8b3b6455a9fdaba4">&#9670;&nbsp;</a></span>format_file_path()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_file_path </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_path</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format a file path with a warning color.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_af3441fb3c2c3850b8b3b6455a9fdaba4_icgraph.svg" width="100%" height="400"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="adcb97fc26b405d2b9cdf5eb7aecc5452" name="adcb97fc26b405d2b9cdf5eb7aecc5452"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adcb97fc26b405d2b9cdf5eb7aecc5452">&#9670;&nbsp;</a></span>format_highlight()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_highlight </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format a highlighted message with appropriate color.</pre> 
+</div>
+</div>
+<a id="a92c3e466d1912058167be2eacf85b9f6" name="a92c3e466d1912058167be2eacf85b9f6"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a92c3e466d1912058167be2eacf85b9f6">&#9670;&nbsp;</a></span>format_info()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_info </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format an informational message with appropriate color.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a92c3e466d1912058167be2eacf85b9f6_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a532cdb4de7c679ce8b29c3e9116c4776" name="a532cdb4de7c679ce8b29c3e9116c4776"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a532cdb4de7c679ce8b29c3e9116c4776">&#9670;&nbsp;</a></span>format_success()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_success </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Formats a success message with green color and reset style.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a532cdb4de7c679ce8b29c3e9116c4776_icgraph.svg" width="100%" height="437"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a0a6fd2613c6fe053b6e4356cd9e5cda2" name="a0a6fd2613c6fe053b6e4356cd9e5cda2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0a6fd2613c6fe053b6e4356cd9e5cda2">&#9670;&nbsp;</a></span>format_warning()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.format_warning </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Format a warning message with appropriate color.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a0a6fd2613c6fe053b6e4356cd9e5cda2_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a6f0acd7dd91abfe67d0807803bc3b65f" name="a6f0acd7dd91abfe67d0807803bc3b65f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6f0acd7dd91abfe67d0807803bc3b65f">&#9670;&nbsp;</a></span>print_error()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_error </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Print an error message with appropriate formatting.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_cgraph.svg" width="446" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a811f0adf6e9bf71510c379b6fa155e44" name="a811f0adf6e9bf71510c379b6fa155e44"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a811f0adf6e9bf71510c379b6fa155e44">&#9670;&nbsp;</a></span>print_info()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_info </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Prints an informational message with formatting.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_cgraph.svg" width="510" height="38"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="adfcbbfe39029ab6d1dd33e7bf75ae115" name="adfcbbfe39029ab6d1dd33e7bf75ae115"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#adfcbbfe39029ab6d1dd33e7bf75ae115">&#9670;&nbsp;</a></span>print_processing()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_processing </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>file_path</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Print a processing message for a specified file.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_cgraph.svg" width="446" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_icgraph.svg" width="434" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="aa6e684c00e26199440137a87ed9b195c" name="aa6e684c00e26199440137a87ed9b195c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa6e684c00e26199440137a87ed9b195c">&#9670;&nbsp;</a></span>print_status()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_status </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>status</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Print a status message with an appropriate symbol.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_aa6e684c00e26199440137a87ed9b195c_icgraph.svg" width="436" height="118"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a2b16aa6b68a9edea5f29f84f1c4be79a" name="a2b16aa6b68a9edea5f29f84f1c4be79a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a2b16aa6b68a9edea5f29f84f1c4be79a">&#9670;&nbsp;</a></span>print_success()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_success </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Prints a formatted success message.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_cgraph.svg" width="446" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_icgraph.svg" width="496" height="183"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
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+</div>
+
+</div>
+</div>
+<a id="a1ffbb9671dbe233770268e2dd66a67fa" name="a1ffbb9671dbe233770268e2dd66a67fa"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1ffbb9671dbe233770268e2dd66a67fa">&#9670;&nbsp;</a></span>print_warning()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.print_warning </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>message</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Prints a warning message with formatted output.</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_cgraph.svg" width="446" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+<div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_icgraph.svg" width="100%" height="600"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a5a7340d0fc60fb80f17514d60bf45f1d" name="a5a7340d0fc60fb80f17514d60bf45f1d"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a5a7340d0fc60fb80f17514d60bf45f1d">&#9670;&nbsp;</a></span>update_stage()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.ui_utils.update_stage </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>pbar</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>stage_name</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Update the progress bar with a new stage name.</pre> <div class="dynheader">
+Here is the caller graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacepenify__hook_1_1ui__utils_a5a7340d0fc60fb80f17514d60bf45f1d_icgraph.svg" width="100%" height="388"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<h2 class="groupheader">Variable Documentation</h2>
+<a id="ab560cfade398ac1e0bd47befb52d9f71" name="ab560cfade398ac1e0bd47befb52d9f71"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab560cfade398ac1e0bd47befb52d9f71">&#9670;&nbsp;</a></span>autoreset</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.autoreset</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a4ab4e61dfab7973c87bef59c6e1977fe" name="a4ab4e61dfab7973c87bef59c6e1977fe"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4ab4e61dfab7973c87bef59c6e1977fe">&#9670;&nbsp;</a></span>ERROR_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.ERROR_COLOR = Fore.RED</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aa564e1e1d016c8227d076542e74cecb0" name="aa564e1e1d016c8227d076542e74cecb0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aa564e1e1d016c8227d076542e74cecb0">&#9670;&nbsp;</a></span>ERROR_SYMBOL</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">string penify_hook.ui_utils.ERROR_SYMBOL = &quot;✗&quot;</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aba01b8259f0d66cdc2b4a1b58f9736fc" name="aba01b8259f0d66cdc2b4a1b58f9736fc"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aba01b8259f0d66cdc2b4a1b58f9736fc">&#9670;&nbsp;</a></span>HIGHLIGHT_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.HIGHLIGHT_COLOR = Fore.BLUE</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a9fdcb180915696f5d217032a62c3857c" name="a9fdcb180915696f5d217032a62c3857c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a9fdcb180915696f5d217032a62c3857c">&#9670;&nbsp;</a></span>INFO_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.INFO_COLOR = Fore.CYAN</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="aca0fcee81606857497520ae4290bc9f5" name="aca0fcee81606857497520ae4290bc9f5"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aca0fcee81606857497520ae4290bc9f5">&#9670;&nbsp;</a></span>NEUTRAL_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.NEUTRAL_COLOR = Fore.WHITE</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a3b208e2750a38dd09467a73e4afd9756" name="a3b208e2750a38dd09467a73e4afd9756"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3b208e2750a38dd09467a73e4afd9756">&#9670;&nbsp;</a></span>PROCESSING_SYMBOL</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">string penify_hook.ui_utils.PROCESSING_SYMBOL = &quot;⟳&quot;</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a22c450c5e2b5394618ecf9b636560df4" name="a22c450c5e2b5394618ecf9b636560df4"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a22c450c5e2b5394618ecf9b636560df4">&#9670;&nbsp;</a></span>SUCCESS_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.SUCCESS_COLOR = Fore.GREEN</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a3c6fe4bd17c1a5fe76587225ae4beb3e" name="a3c6fe4bd17c1a5fe76587225ae4beb3e"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a3c6fe4bd17c1a5fe76587225ae4beb3e">&#9670;&nbsp;</a></span>SUCCESS_SYMBOL</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">string penify_hook.ui_utils.SUCCESS_SYMBOL = &quot;✓&quot;</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a177bc9b44157844c999e0c1c2c6936ff" name="a177bc9b44157844c999e0c1c2c6936ff"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a177bc9b44157844c999e0c1c2c6936ff">&#9670;&nbsp;</a></span>WARNING_COLOR</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">penify_hook.ui_utils.WARNING_COLOR = Fore.YELLOW</td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+
+</div>
+</div>
+<a id="a6eaea98f1a8cbe16a181647da2fc0a16" name="a6eaea98f1a8cbe16a181647da2fc0a16"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a6eaea98f1a8cbe16a181647da2fc0a16">&#9670;&nbsp;</a></span>WARNING_SYMBOL</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
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+</table><table class="memberdecls">
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+<tr class="separator:a0c0c1ed6b197038085c94a90ceedfb01"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a4ec5335a4026c22a34a3a8ccf665a5f2" name="a4ec5335a4026c22a34a3a8ccf665a5f2"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4ec5335a4026c22a34a3a8ccf665a5f2">&#9670;&nbsp;</a></span>find_git_parent()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.utils.find_git_parent </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>path</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Traverse up from the given path to find the nearest directory containing a .git
+subdirectory.</pre> 
+</div>
+</div>
+<a id="ae236f3c4c8bf5dcddbb92b4c2065eea3" name="ae236f3c4c8bf5dcddbb92b4c2065eea3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ae236f3c4c8bf5dcddbb92b4c2065eea3">&#9670;&nbsp;</a></span>get_repo_details()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.utils.get_repo_details </td>
+          <td>(</td>
+          <td class="paramtype">Repo&#160;</td>
+          <td class="paramname"><em>repo</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Determine the details of a repository including its remote URL, hosting
+service, organization name, and repository name.
+
+This function extracts the remote URL from the given Git repository object and
+determines the hosting service (e.g., GitHub, Azure DevOps, Bitbucket, GitLab).
+It then parses the URL to extract the organization name and repository name. If
+the URL does not match any known hosting service pattern, it sets the hosting
+service as "Unknown". The function handles exceptions that may occur during
+this process and logs an error message if needed.
+
+Args:
+    repo (Repo): A GitPython Repo object representing the local git repository.
+
+Returns:
+    dict: A dictionary containing the organization name, repository name, and hosting
+        service.
+</pre> 
+</div>
+</div>
+<a id="a95c3f9c80860d6a2e2d061d2fb660a3f" name="a95c3f9c80860d6a2e2d061d2fb660a3f"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a95c3f9c80860d6a2e2d061d2fb660a3f">&#9670;&nbsp;</a></span>recursive_search_git_folder()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def penify_hook.utils.recursive_search_git_folder </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>folder_path</em></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Recursively searches for a .git folder starting from the given directory.</pre> <div class="dynheader">
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+<div class="dyncontent">
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+</div>
+</div>
+
+</div>
+</div>
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+<h2 class="memtitle"><span class="permalink"><a href="#a0c0c1ed6b197038085c94a90ceedfb01">&#9670;&nbsp;</a></span>logger</h2>
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+    [ "GitRepoNotFoundError", "classpenify__hook_1_1utils_1_1GitRepoNotFoundError.html", null ],
+    [ "find_git_parent", "namespacepenify__hook_1_1utils.html#a4ec5335a4026c22a34a3a8ccf665a5f2", null ],
+    [ "get_repo_details", "namespacepenify__hook_1_1utils.html#ae236f3c4c8bf5dcddbb92b4c2065eea3", null ],
+    [ "recursive_search_git_folder", "namespacepenify__hook_1_1utils.html#a95c3f9c80860d6a2e2d061d2fb660a3f", null ],
+    [ "logger", "namespacepenify__hook_1_1utils.html#a0c0c1ed6b197038085c94a90ceedfb01", null ]
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+$(document).ready(function(){initNavTree('namespacetests_1_1test__doc__commands.html',''); initResizable(); });
+/* @license-end */
+</script>
+<div id="doc-content">
+<!-- window showing the filter options -->
+<div id="MSearchSelectWindow"
+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
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+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle"><div class="title">tests.test_doc_commands Namespace Reference</div></div>
+</div><!--header-->
+<div class="contents">
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a806110833eb0aad547156faf014b31d8"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a806110833eb0aad547156faf014b31d8">test_generate_doc_no_location</a> (mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</td></tr>
+<tr class="separator:a806110833eb0aad547156faf014b31d8"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0e74c920f258f442914771164fe26b45"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a0e74c920f258f442914771164fe26b45">test_generate_doc_file_location</a> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</td></tr>
+<tr class="separator:a0e74c920f258f442914771164fe26b45"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a4bb75610e40d94d42bc169b25403c186"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a4bb75610e40d94d42bc169b25403c186">test_generate_doc_folder_location</a> (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</td></tr>
+<tr class="separator:a4bb75610e40d94d42bc169b25403c186"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:aec76cc25c23476794234cdadbcaef0c0"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#aec76cc25c23476794234cdadbcaef0c0">test_generate_doc_error_handling</a> (mock_api_client, mock_git_analyzer, mock_exit)</td></tr>
+<tr class="separator:aec76cc25c23476794234cdadbcaef0c0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0f27751d0ba2acfe40ef7e85bccf47d7"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a0f27751d0ba2acfe40ef7e85bccf47d7">test_setup_docgen_parser</a> ()</td></tr>
+<tr class="separator:a0f27751d0ba2acfe40ef7e85bccf47d7"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab74688baa8c9b5ba302c2877a9789d05"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#ab74688baa8c9b5ba302c2877a9789d05">test_handle_docgen_install_hook</a> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</td></tr>
+<tr class="separator:ab74688baa8c9b5ba302c2877a9789d05"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a1458af9ad0128c3ca1263b552fd5e482"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a1458af9ad0128c3ca1263b552fd5e482">test_handle_docgen_uninstall_hook</a> (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</td></tr>
+<tr class="separator:a1458af9ad0128c3ca1263b552fd5e482"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:ab158ffa48469b6c097a7a55fcb20c21a"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#ab158ffa48469b6c097a7a55fcb20c21a">test_handle_docgen_generate</a> (mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</td></tr>
+<tr class="separator:ab158ffa48469b6c097a7a55fcb20c21a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:af9b01e5fc89255cac96747fa081c442c"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#af9b01e5fc89255cac96747fa081c442c">test_handle_docgen_no_token</a> (mock_exit, mock_get_token)</td></tr>
+<tr class="separator:af9b01e5fc89255cac96747fa081c442c"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a335e7fd4912192c7276cf31bbebc6eb0"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a335e7fd4912192c7276cf31bbebc6eb0">test_generate_doc_with_file_exception</a> (mock_api_client, mock_getcwd)</td></tr>
+<tr class="separator:a335e7fd4912192c7276cf31bbebc6eb0"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a64165ddfdb3071a88422f080f0e529a3"><td class="memItemLeft" align="right" valign="top">def&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacetests_1_1test__doc__commands.html#a64165ddfdb3071a88422f080f0e529a3">test_generate_doc_with_folder_exception</a> (mock_api_client, mock_getcwd)</td></tr>
+<tr class="separator:a64165ddfdb3071a88422f080f0e529a3"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="aec76cc25c23476794234cdadbcaef0c0" name="aec76cc25c23476794234cdadbcaef0c0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#aec76cc25c23476794234cdadbcaef0c0">&#9670;&nbsp;</a></span>test_generate_doc_error_handling()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_error_handling </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_exit</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generate a documentation string for the provided code snippet using
+Google Docstring style.
+
+Short one line description: Test function to ensure proper error
+handling during API calls with GitAnalyzer.  Multiline long description:
+This test function is designed to verify that the generate_doc function
+handles exceptions correctly when an error occurs during API interaction
+with GitAnalyzer. It sets up a mock API client and a mock Git analyzer,
+causing the analyzer to raise an exception to simulate a failure
+condition. The function then asserts that the exit code is set to 1 when
+the error handling mechanism is invoked.
+
+Args:
+    mock_api_client (MagicMock): A mock object simulating the API client.
+    mock_git_analyzer (MagicMock): A mock object simulating the Git analyzer, configured to raise an
+        exception.
+    mock_exit (MagicMock): A mock object representing the exit function, which should be called
+        with an error code.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_aec76cc25c23476794234cdadbcaef0c0_cgraph.svg" width="484" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a0e74c920f258f442914771164fe26b45" name="a0e74c920f258f442914771164fe26b45"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0e74c920f258f442914771164fe26b45">&#9670;&nbsp;</a></span>test_generate_doc_file_location()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_file_location </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_folder_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_analyzer</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test generating a documentation file location.
+
+This function tests the process of generating a documentation file
+location using mock objects for API client, folder analyzer, file
+analyzer, and Git analyzer. It sets up the necessary mocks, calls the
+`generate_doc` function with specified parameters, and asserts that the
+appropriate methods on the mock objects are called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg" width="484" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a4bb75610e40d94d42bc169b25403c186" name="a4bb75610e40d94d42bc169b25403c186"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a4bb75610e40d94d42bc169b25403c186">&#9670;&nbsp;</a></span>test_generate_doc_folder_location()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_folder_location </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_folder_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_analyzer</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the function to generate documentation for a folder location.
+
+It sets up mock objects for API client, folder analyzer, file analyzer,
+and Git analyzer, then calls the `generate_doc` function with specified
+parameters. Finally, it asserts that the correct methods on the mock
+objects were called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a4bb75610e40d94d42bc169b25403c186_cgraph.svg" width="484" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a806110833eb0aad547156faf014b31d8" name="a806110833eb0aad547156faf014b31d8"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a806110833eb0aad547156faf014b31d8">&#9670;&nbsp;</a></span>test_generate_doc_no_location()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_no_location </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getcwd</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_folder_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_file_analyzer</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_git_analyzer</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test function to generate documentation without location information.
+
+This function sets up mocks for the API client, current working
+directory, and Git analyzer. It then calls the `generate_doc` function
+with a fake API URL and token. The function is expected to initialize
+the API client, configure the Git analyzer, and run it without any
+location information.
+
+Args:
+    mock_getcwd (MagicMock): Mock for os.getcwd().
+    mock_api_client (MagicMock): Mock for creating an API client.
+    mock_folder_analyzer (MagicMock): Mock for folder analysis.
+    mock_file_analyzer (MagicMock): Mock for file analysis.
+    mock_git_analyzer (MagicMock): Mock for Git analyzer setup.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a806110833eb0aad547156faf014b31d8_cgraph.svg" width="484" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a335e7fd4912192c7276cf31bbebc6eb0" name="a335e7fd4912192c7276cf31bbebc6eb0"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a335e7fd4912192c7276cf31bbebc6eb0">&#9670;&nbsp;</a></span>test_generate_doc_with_file_exception()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_with_file_exception </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getcwd</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generate documentation from a Python source file.
+
+This function reads a Python file and generates a docstring based on its
+content. It uses mock objects to simulate API calls and directory
+operations during testing.
+
+Args:
+    mock_api_client (unittest.mock.MagicMock): A mock object for simulating API client behavior.
+    mock_getcwd (unittest.mock.MagicMock): A mock object for simulating the current working directory function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a335e7fd4912192c7276cf31bbebc6eb0_cgraph.svg" width="514" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a64165ddfdb3071a88422f080f0e529a3" name="a64165ddfdb3071a88422f080f0e529a3"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a64165ddfdb3071a88422f080f0e529a3">&#9670;&nbsp;</a></span>test_generate_doc_with_folder_exception()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_generate_doc_with_folder_exception </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_api_client</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_getcwd</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Generate documentation from a given API endpoint and save it to a
+folder.
+
+This function fetches data from the specified API endpoint, processes
+it, and saves the generated documentation in the provided folder. If an
+error occurs during the fetching process, a SystemExit exception is
+raised with an appropriate message.
+
+Args:
+    api_url (str): The URL of the API endpoint from which data will be fetched.
+    token (str): The authentication token required to access the API.
+    folder_path (str): The path to the folder where the documentation will be saved.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a64165ddfdb3071a88422f080f0e529a3_cgraph.svg" width="484" height="67"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ab158ffa48469b6c097a7a55fcb20c21a" name="ab158ffa48469b6c097a7a55fcb20c21a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab158ffa48469b6c097a7a55fcb20c21a">&#9670;&nbsp;</a></span>test_handle_docgen_generate()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_handle_docgen_generate </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_generate_doc</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_uninstall_hook</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_install_hook</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the direct documentation generation functionality.
+
+This function tests the `handle_docgen` function when no subcommand is
+provided. It verifies that the document generation hook is called and
+the uninstall and install hooks are not called.
+
+Args:
+    mock_get_token (MagicMock): Mocked function to get authentication token.
+    mock_generate_doc (MagicMock): Mocked function for generating documentation.
+    mock_uninstall_hook (MagicMock): Mocked function for uninstalling the document generation hook.
+    mock_install_hook (MagicMock): Mocked function for installing the document generation hook.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_ab158ffa48469b6c097a7a55fcb20c21a_cgraph.svg" width="100%" height="498"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="ab74688baa8c9b5ba302c2877a9789d05" name="ab74688baa8c9b5ba302c2877a9789d05"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#ab74688baa8c9b5ba302c2877a9789d05">&#9670;&nbsp;</a></span>test_handle_docgen_install_hook()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_handle_docgen_install_hook </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_exit</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_generate_doc</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_uninstall_hook</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_install_hook</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the handling of the 'install-hook' subcommand.
+
+This function sets up a mock environment where it simulates the
+execution of the 'install-hook' subcommand. It verifies that the
+`mock_install_hook` is called with the correct arguments, while
+`mock_generate_doc` and `mock_uninstall_hook` are not called.
+
+Args:
+    mock_exit (MagicMock): Mock object for sys.exit.
+    mock_get_token (MagicMock): Mock object to simulate fetching a token.
+    mock_generate_doc (MagicMock): Mock object to simulate generating documentation.
+    mock_uninstall_hook (MagicMock): Mock object to simulate uninstalling a hook.
+    mock_install_hook (MagicMock): Mock object to simulate installing a hook.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_ab74688baa8c9b5ba302c2877a9789d05_cgraph.svg" width="100%" height="498"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="af9b01e5fc89255cac96747fa081c442c" name="af9b01e5fc89255cac96747fa081c442c"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#af9b01e5fc89255cac96747fa081c442c">&#9670;&nbsp;</a></span>test_handle_docgen_no_token()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_handle_docgen_no_token </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_exit</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_token</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the behavior of the `handle_docgen` function when no token is
+provided.
+
+This function asserts that if no token is returned by `mock_get_token`,
+the `handle_docgen` function will call `mock_exit` with a status code of
+1.
+
+Args:
+    mock_exit (MagicMock): A MagicMock object simulating the `exit` function.
+    mock_get_token (MagicMock): A MagicMock object simulating the `get_token` function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_af9b01e5fc89255cac96747fa081c442c_cgraph.svg" width="100%" height="498"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a1458af9ad0128c3ca1263b552fd5e482" name="a1458af9ad0128c3ca1263b552fd5e482"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a1458af9ad0128c3ca1263b552fd5e482">&#9670;&nbsp;</a></span>test_handle_docgen_uninstall_hook()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_handle_docgen_uninstall_hook </td>
+          <td>(</td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_exit</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_get_token</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_generate_doc</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_uninstall_hook</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">&#160;</td>
+          <td class="paramname"><em>mock_install_hook</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the uninstall-hook subcommand of the handle_docgen function.
+This test case sets up a mock environment and verifies that the
+uninstall-hook is called with the correct location, while generate_doc
+and install_hook are not called.
+
+Args:
+    mock_exit (MagicMock): A mock for the exit function.
+    mock_get_token (MagicMock): A mock for the get_token function.
+    mock_generate_doc (MagicMock): A mock for the generate_doc function.
+    mock_uninstall_hook (MagicMock): A mock for the uninstall_hook function.
+    mock_install_hook (MagicMock): A mock for the install_hook function.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
+<div class="dyncontent">
+<div class="center"><div class="zoom"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a1458af9ad0128c3ca1263b552fd5e482_cgraph.svg" width="100%" height="498"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe></div>
+</div>
+</div>
+
+</div>
+</div>
+<a id="a0f27751d0ba2acfe40ef7e85bccf47d7" name="a0f27751d0ba2acfe40ef7e85bccf47d7"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a0f27751d0ba2acfe40ef7e85bccf47d7">&#9670;&nbsp;</a></span>test_setup_docgen_parser()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">def tests.test_doc_commands.test_setup_docgen_parser </td>
+          <td>(</td>
+          <td class="paramname"></td><td>)</td>
+          <td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<pre class="fragment">Test the setup_docgen_parser function to ensure it properly configures
+the ArgumentParser for docgen options.
+
+It verifies that the parser correctly sets up docgen options and handles
+different subcommands like 'install-hook' and 'uninstall-hook'.
+</pre> <div class="dynheader">
+Here is the call graph for this function:</div>
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+<div class="center"><iframe scrolling="no" frameborder="0" src="namespacetests_1_1test__doc__commands_a0f27751d0ba2acfe40ef7e85bccf47d7_cgraph.svg" width="523" height="52"><p><b>This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead.</b></p></iframe>
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+#nav-tree .children_ul {
+  margin:0;
+  padding:4px;
+}
+
+#nav-tree ul {
+  list-style:none outside none;
+  margin:0px;
+  padding:0px;
+}
+
+#nav-tree li {
+  white-space:nowrap;
+  margin:0px;
+  padding:0px;
+}
+
+#nav-tree .plus {
+  margin:0px;
+}
+
+#nav-tree .selected {
+  background-image: url('tab_a.png');
+  background-repeat:repeat-x;
+  color: #fff;
+  text-shadow: 0px 1px 1px rgba(0, 0, 0, 1.0);
+}
+
+#nav-tree img {
+  margin:0px;
+  padding:0px;
+  border:0px;
+  vertical-align: middle;
+}
+
+#nav-tree a {
+  text-decoration:none;
+  padding:0px;
+  margin:0px;
+  outline:none;
+}
+
+#nav-tree .label {
+  margin:0px;
+  padding:0px;
+  font: 12px 'Lucida Grande',Geneva,Helvetica,Arial,sans-serif;
+}
+
+#nav-tree .label a {
+  padding:2px;
+}
+
+#nav-tree .selected a {
+  text-decoration:none;
+  color:#fff;
+}
+
+#nav-tree .children_ul {
+  margin:0px;
+  padding:0px;
+}
+
+#nav-tree .item {
+  margin:0px;
+  padding:0px;
+}
+
+#nav-tree {
+  padding: 0px 0px;
+  background-color: #FAFAFF; 
+  font-size:14px;
+  overflow:auto;
+}
+
+#doc-content {
+  overflow:auto;
+  display:block;
+  padding:0px;
+  margin:0px;
+  -webkit-overflow-scrolling : touch; /* iOS 5+ */
+}
+
+#side-nav {
+  padding:0 6px 0 0;
+  margin: 0px;
+  display:block;
+  position: absolute;
+  left: 0px;
+  width: 250px;
+  overflow : hidden;
+}
+
+.ui-resizable .ui-resizable-handle {
+  display:block;
+}
+
+.ui-resizable-e {
+  background-image:url("splitbar.png");
+  background-size:100%;
+  background-repeat:repeat-y;
+  background-attachment: scroll;
+  cursor:ew-resize;
+  height:100%;
+  right:0;
+  top:0;
+  width:6px;
+}
+
+.ui-resizable-handle {
+  display:none;
+  font-size:0.1px;
+  position:absolute;
+  z-index:1;
+}
+
+#nav-tree-contents {
+  margin: 6px 0px 0px 0px;
+}
+
+#nav-tree {
+  background-image:url('nav_h.png');
+  background-repeat:repeat-x;
+  background-color: #F9FAFC;
+  -webkit-overflow-scrolling : touch; /* iOS 5+ */
+}
+
+#nav-sync {
+  position:absolute;
+  top:5px;
+  right:24px;
+  z-index:0;
+}
+
+#nav-sync img {
+  opacity:0.3;
+}
+
+#nav-sync img:hover {
+  opacity:0.9;
+}
+
+@media print
+{
+  #nav-tree { display: none; }
+  div.ui-resizable-handle { display: none; position: relative; }
+}
+
diff --git a/docs/html/navtree.js b/docs/html/navtree.js
new file mode 100644
index 0000000..2798368
--- /dev/null
+++ b/docs/html/navtree.js
@@ -0,0 +1,549 @@
+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+ DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
+ */
+var navTreeSubIndices = new Array();
+var arrowDown = '&#9660;';
+var arrowRight = '&#9658;';
+
+function getData(varName)
+{
+  var i = varName.lastIndexOf('/');
+  var n = i>=0 ? varName.substring(i+1) : varName;
+  return eval(n.replace(/\-/g,'_'));
+}
+
+function stripPath(uri)
+{
+  return uri.substring(uri.lastIndexOf('/')+1);
+}
+
+function stripPath2(uri)
+{
+  var i = uri.lastIndexOf('/');
+  var s = uri.substring(i+1);
+  var m = uri.substring(0,i+1).match(/\/d\w\/d\w\w\/$/);
+  return m ? uri.substring(i-6) : s;
+}
+
+function hashValue()
+{
+  return $(location).attr('hash').substring(1).replace(/[^\w\-]/g,'');
+}
+
+function hashUrl()
+{
+  return '#'+hashValue();
+}
+
+function pathName()
+{
+  return $(location).attr('pathname').replace(/[^-A-Za-z0-9+&@#/%?=~_|!:,.;\(\)]/g, '');
+}
+
+function localStorageSupported()
+{
+  try {
+    return 'localStorage' in window && window['localStorage'] !== null && window.localStorage.getItem;
+  }
+  catch(e) {
+    return false;
+  }
+}
+
+function storeLink(link)
+{
+  if (!$("#nav-sync").hasClass('sync') && localStorageSupported()) {
+      window.localStorage.setItem('navpath',link);
+  }
+}
+
+function deleteLink()
+{
+  if (localStorageSupported()) {
+    window.localStorage.setItem('navpath','');
+  }
+}
+
+function cachedLink()
+{
+  if (localStorageSupported()) {
+    return window.localStorage.getItem('navpath');
+  } else {
+    return '';
+  }
+}
+
+function getScript(scriptName,func,show)
+{
+  var head = document.getElementsByTagName("head")[0];
+  var script = document.createElement('script');
+  script.id = scriptName;
+  script.type = 'text/javascript';
+  script.onload = func;
+  script.src = scriptName+'.js';
+  head.appendChild(script);
+}
+
+function createIndent(o,domNode,node,level)
+{
+  var level=-1;
+  var n = node;
+  while (n.parentNode) { level++; n=n.parentNode; }
+  if (node.childrenData) {
+    var imgNode = document.createElement("span");
+    imgNode.className = 'arrow';
+    imgNode.style.paddingLeft=(16*level).toString()+'px';
+    imgNode.innerHTML=arrowRight;
+    node.plus_img = imgNode;
+    node.expandToggle = document.createElement("a");
+    node.expandToggle.href = "javascript:void(0)";
+    node.expandToggle.onclick = function() {
+      if (node.expanded) {
+        $(node.getChildrenUL()).slideUp("fast");
+        node.plus_img.innerHTML=arrowRight;
+        node.expanded = false;
+      } else {
+        expandNode(o, node, false, false);
+      }
+    }
+    node.expandToggle.appendChild(imgNode);
+    domNode.appendChild(node.expandToggle);
+  } else {
+    var span = document.createElement("span");
+    span.className = 'arrow';
+    span.style.width   = 16*(level+1)+'px';
+    span.innerHTML = '&#160;';
+    domNode.appendChild(span);
+  }
+}
+
+var animationInProgress = false;
+
+function gotoAnchor(anchor,aname,updateLocation)
+{
+  var pos, docContent = $('#doc-content');
+  var ancParent = $(anchor.parent());
+  if (ancParent.hasClass('memItemLeft') ||
+      ancParent.hasClass('memtitle') ||
+      ancParent.hasClass('fieldname') ||
+      ancParent.hasClass('fieldtype') ||
+      ancParent.is(':header'))
+  {
+    pos = ancParent.position().top;
+  } else if (anchor.position()) {
+    pos = anchor.position().top;
+  }
+  if (pos) {
+    var dist = Math.abs(Math.min(
+               pos-docContent.offset().top,
+               docContent[0].scrollHeight-
+               docContent.height()-docContent.scrollTop()));
+    animationInProgress=true;
+    docContent.animate({
+      scrollTop: pos + docContent.scrollTop() - docContent.offset().top
+    },Math.max(50,Math.min(500,dist)),function(){
+      if (updateLocation) window.location.href=aname;
+      animationInProgress=false;
+    });
+  }
+}
+
+function newNode(o, po, text, link, childrenData, lastNode)
+{
+  var node = new Object();
+  node.children = Array();
+  node.childrenData = childrenData;
+  node.depth = po.depth + 1;
+  node.relpath = po.relpath;
+  node.isLast = lastNode;
+
+  node.li = document.createElement("li");
+  po.getChildrenUL().appendChild(node.li);
+  node.parentNode = po;
+
+  node.itemDiv = document.createElement("div");
+  node.itemDiv.className = "item";
+
+  node.labelSpan = document.createElement("span");
+  node.labelSpan.className = "label";
+
+  createIndent(o,node.itemDiv,node,0);
+  node.itemDiv.appendChild(node.labelSpan);
+  node.li.appendChild(node.itemDiv);
+
+  var a = document.createElement("a");
+  node.labelSpan.appendChild(a);
+  node.label = document.createTextNode(text);
+  node.expanded = false;
+  a.appendChild(node.label);
+  if (link) {
+    var url;
+    if (link.substring(0,1)=='^') {
+      url = link.substring(1);
+      link = url;
+    } else {
+      url = node.relpath+link;
+    }
+    a.className = stripPath(link.replace('#',':'));
+    if (link.indexOf('#')!=-1) {
+      var aname = '#'+link.split('#')[1];
+      var srcPage = stripPath(pathName());
+      var targetPage = stripPath(link.split('#')[0]);
+      a.href = srcPage!=targetPage ? url : "javascript:void(0)";
+      a.onclick = function(){
+        storeLink(link);
+        if (!$(a).parent().parent().hasClass('selected'))
+        {
+          $('.item').removeClass('selected');
+          $('.item').removeAttr('id');
+          $(a).parent().parent().addClass('selected');
+          $(a).parent().parent().attr('id','selected');
+        }
+        var anchor = $(aname);
+        gotoAnchor(anchor,aname,true);
+      };
+    } else {
+      a.href = url;
+      a.onclick = function() { storeLink(link); }
+    }
+  } else {
+    if (childrenData != null)
+    {
+      a.className = "nolink";
+      a.href = "javascript:void(0)";
+      a.onclick = node.expandToggle.onclick;
+    }
+  }
+
+  node.childrenUL = null;
+  node.getChildrenUL = function() {
+    if (!node.childrenUL) {
+      node.childrenUL = document.createElement("ul");
+      node.childrenUL.className = "children_ul";
+      node.childrenUL.style.display = "none";
+      node.li.appendChild(node.childrenUL);
+    }
+    return node.childrenUL;
+  };
+
+  return node;
+}
+
+function showRoot()
+{
+  var headerHeight = $("#top").height();
+  var footerHeight = $("#nav-path").height();
+  var windowHeight = $(window).height() - headerHeight - footerHeight;
+  (function (){ // retry until we can scroll to the selected item
+    try {
+      var navtree=$('#nav-tree');
+      navtree.scrollTo('#selected',100,{offset:-windowHeight/2});
+    } catch (err) {
+      setTimeout(arguments.callee, 0);
+    }
+  })();
+}
+
+function expandNode(o, node, imm, showRoot)
+{
+  if (node.childrenData && !node.expanded) {
+    if (typeof(node.childrenData)==='string') {
+      var varName    = node.childrenData;
+      getScript(node.relpath+varName,function(){
+        node.childrenData = getData(varName);
+        expandNode(o, node, imm, showRoot);
+      }, showRoot);
+    } else {
+      if (!node.childrenVisited) {
+        getNode(o, node);
+      }
+      $(node.getChildrenUL()).slideDown("fast");
+      node.plus_img.innerHTML = arrowDown;
+      node.expanded = true;
+    }
+  }
+}
+
+function glowEffect(n,duration)
+{
+  n.addClass('glow').delay(duration).queue(function(next){
+    $(this).removeClass('glow');next();
+  });
+}
+
+function highlightAnchor()
+{
+  var aname = hashUrl();
+  var anchor = $(aname);
+  if (anchor.parent().attr('class')=='memItemLeft'){
+    var rows = $('.memberdecls tr[class$="'+hashValue()+'"]');
+    glowEffect(rows.children(),300); // member without details
+  } else if (anchor.parent().attr('class')=='fieldname'){
+    glowEffect(anchor.parent().parent(),1000); // enum value
+  } else if (anchor.parent().attr('class')=='fieldtype'){
+    glowEffect(anchor.parent().parent(),1000); // struct field
+  } else if (anchor.parent().is(":header")) {
+    glowEffect(anchor.parent(),1000); // section header
+  } else {
+    glowEffect(anchor.next(),1000); // normal member
+  }
+}
+
+function selectAndHighlight(hash,n)
+{
+  var a;
+  if (hash) {
+    var link=stripPath(pathName())+':'+hash.substring(1);
+    a=$('.item a[class$="'+link+'"]');
+  }
+  if (a && a.length) {
+    a.parent().parent().addClass('selected');
+    a.parent().parent().attr('id','selected');
+    highlightAnchor();
+  } else if (n) {
+    $(n.itemDiv).addClass('selected');
+    $(n.itemDiv).attr('id','selected');
+  }
+  var topOffset=5;
+  if (typeof page_layout!=='undefined' && page_layout==1) {
+    topOffset+=$('#top').outerHeight();
+  }
+  if ($('#nav-tree-contents .item:first').hasClass('selected')) {
+    topOffset+=25;
+  }
+  $('#nav-sync').css('top',topOffset+'px');
+  showRoot();
+}
+
+function showNode(o, node, index, hash)
+{
+  if (node && node.childrenData) {
+    if (typeof(node.childrenData)==='string') {
+      var varName    = node.childrenData;
+      getScript(node.relpath+varName,function(){
+        node.childrenData = getData(varName);
+        showNode(o,node,index,hash);
+      },true);
+    } else {
+      if (!node.childrenVisited) {
+        getNode(o, node);
+      }
+      $(node.getChildrenUL()).css({'display':'block'});
+      node.plus_img.innerHTML = arrowDown;
+      node.expanded = true;
+      var n = node.children[o.breadcrumbs[index]];
+      if (index+1<o.breadcrumbs.length) {
+        showNode(o,n,index+1,hash);
+      } else {
+        if (typeof(n.childrenData)==='string') {
+          var varName = n.childrenData;
+          getScript(n.relpath+varName,function(){
+            n.childrenData = getData(varName);
+            node.expanded=false;
+            showNode(o,node,index,hash); // retry with child node expanded
+          },true);
+        } else {
+          var rootBase = stripPath(o.toroot.replace(/\..+$/, ''));
+          if (rootBase=="index" || rootBase=="pages" || rootBase=="search") {
+            expandNode(o, n, true, true);
+          }
+          selectAndHighlight(hash,n);
+        }
+      }
+    }
+  } else {
+    selectAndHighlight(hash);
+  }
+}
+
+function removeToInsertLater(element) {
+  var parentNode = element.parentNode;
+  var nextSibling = element.nextSibling;
+  parentNode.removeChild(element);
+  return function() {
+    if (nextSibling) {
+      parentNode.insertBefore(element, nextSibling);
+    } else {
+      parentNode.appendChild(element);
+    }
+  };
+}
+
+function getNode(o, po)
+{
+  var insertFunction = removeToInsertLater(po.li);
+  po.childrenVisited = true;
+  var l = po.childrenData.length-1;
+  for (var i in po.childrenData) {
+    var nodeData = po.childrenData[i];
+    po.children[i] = newNode(o, po, nodeData[0], nodeData[1], nodeData[2],
+      i==l);
+  }
+  insertFunction();
+}
+
+function gotoNode(o,subIndex,root,hash,relpath)
+{
+  var nti = navTreeSubIndices[subIndex][root+hash];
+  o.breadcrumbs = $.extend(true, [], nti ? nti : navTreeSubIndices[subIndex][root]);
+  if (!o.breadcrumbs && root!=NAVTREE[0][1]) { // fallback: show index
+    navTo(o,NAVTREE[0][1],"",relpath);
+    $('.item').removeClass('selected');
+    $('.item').removeAttr('id');
+  }
+  if (o.breadcrumbs) {
+    o.breadcrumbs.unshift(0); // add 0 for root node
+    showNode(o, o.node, 0, hash);
+  }
+}
+
+function navTo(o,root,hash,relpath)
+{
+  var link = cachedLink();
+  if (link) {
+    var parts = link.split('#');
+    root = parts[0];
+    if (parts.length>1) hash = '#'+parts[1].replace(/[^\w\-]/g,'');
+    else hash='';
+  }
+  if (hash.match(/^#l\d+$/)) {
+    var anchor=$('a[name='+hash.substring(1)+']');
+    glowEffect(anchor.parent(),1000); // line number
+    hash=''; // strip line number anchors
+  }
+  var url=root+hash;
+  var i=-1;
+  while (NAVTREEINDEX[i+1]<=url) i++;
+  if (i==-1) { i=0; root=NAVTREE[0][1]; } // fallback: show index
+  if (navTreeSubIndices[i]) {
+    gotoNode(o,i,root,hash,relpath)
+  } else {
+    getScript(relpath+'navtreeindex'+i,function(){
+      navTreeSubIndices[i] = eval('NAVTREEINDEX'+i);
+      if (navTreeSubIndices[i]) {
+        gotoNode(o,i,root,hash,relpath);
+      }
+    },true);
+  }
+}
+
+function showSyncOff(n,relpath)
+{
+    n.html('<img src="'+relpath+'sync_off.png" title="'+SYNCOFFMSG+'"/>');
+}
+
+function showSyncOn(n,relpath)
+{
+    n.html('<img src="'+relpath+'sync_on.png" title="'+SYNCONMSG+'"/>');
+}
+
+function toggleSyncButton(relpath)
+{
+  var navSync = $('#nav-sync');
+  if (navSync.hasClass('sync')) {
+    navSync.removeClass('sync');
+    showSyncOff(navSync,relpath);
+    storeLink(stripPath2(pathName())+hashUrl());
+  } else {
+    navSync.addClass('sync');
+    showSyncOn(navSync,relpath);
+    deleteLink();
+  }
+}
+
+var loadTriggered = false;
+var readyTriggered = false;
+var loadObject,loadToRoot,loadUrl,loadRelPath;
+
+$(window).on('load',function(){
+  if (readyTriggered) { // ready first
+    navTo(loadObject,loadToRoot,loadUrl,loadRelPath);
+    showRoot();
+  }
+  loadTriggered=true;
+});
+
+function initNavTree(toroot,relpath)
+{
+  var o = new Object();
+  o.toroot = toroot;
+  o.node = new Object();
+  o.node.li = document.getElementById("nav-tree-contents");
+  o.node.childrenData = NAVTREE;
+  o.node.children = new Array();
+  o.node.childrenUL = document.createElement("ul");
+  o.node.getChildrenUL = function() { return o.node.childrenUL; };
+  o.node.li.appendChild(o.node.childrenUL);
+  o.node.depth = 0;
+  o.node.relpath = relpath;
+  o.node.expanded = false;
+  o.node.isLast = true;
+  o.node.plus_img = document.createElement("span");
+  o.node.plus_img.className = 'arrow';
+  o.node.plus_img.innerHTML = arrowRight;
+
+  if (localStorageSupported()) {
+    var navSync = $('#nav-sync');
+    if (cachedLink()) {
+      showSyncOff(navSync,relpath);
+      navSync.removeClass('sync');
+    } else {
+      showSyncOn(navSync,relpath);
+    }
+    navSync.click(function(){ toggleSyncButton(relpath); });
+  }
+
+  if (loadTriggered) { // load before ready
+    navTo(o,toroot,hashUrl(),relpath);
+    showRoot();
+  } else { // ready before load
+    loadObject  = o;
+    loadToRoot  = toroot;
+    loadUrl     = hashUrl();
+    loadRelPath = relpath;
+    readyTriggered=true;
+  }
+
+  $(window).bind('hashchange', function(){
+     if (window.location.hash && window.location.hash.length>1){
+       var a;
+       if ($(location).attr('hash')){
+         var clslink=stripPath(pathName())+':'+hashValue();
+         a=$('.item a[class$="'+clslink.replace(/</g,'\\3c ')+'"]');
+       }
+       if (a==null || !$(a).parent().parent().hasClass('selected')){
+         $('.item').removeClass('selected');
+         $('.item').removeAttr('id');
+       }
+       var link=stripPath2(pathName());
+       navTo(o,link,hashUrl(),relpath);
+     } else if (!animationInProgress) {
+       $('#doc-content').scrollTop(0);
+       $('.item').removeClass('selected');
+       $('.item').removeAttr('id');
+       navTo(o,toroot,hashUrl(),relpath);
+     }
+  })
+}
+/* @license-end */
diff --git a/docs/html/navtreedata.js b/docs/html/navtreedata.js
new file mode 100644
index 0000000..5ab42ab
--- /dev/null
+++ b/docs/html/navtreedata.js
@@ -0,0 +1,241 @@
+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+ DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
+*/
+var NAVTREE =
+[
+  [ "penify-cli", "index.html", [
+    [ "Penify CLI - Commit Commands", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html", [
+      [ "Basic Usage", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md1", null ],
+      [ "Command Options", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md2", [
+        [ "<tt>-m, --message</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md3", null ],
+        [ "<tt>-e, --terminal</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md4", null ],
+        [ "<tt>-d, --description</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md5", null ]
+      ] ],
+      [ "Option Combinations", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md6", [
+        [ "Generate Title Only with Context", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md7", null ],
+        [ "Generate Title and Description with Context", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md8", null ],
+        [ "Generate and Edit Full Commit Message", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md9", null ],
+        [ "Generate, Edit, and Provide Context", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md10", null ]
+      ] ],
+      [ "LLM and JIRA Integration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md11", [
+        [ "Using Local LLM", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md12", null ],
+        [ "JIRA Enhancement", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md13", null ]
+      ] ],
+      [ "Configuration Requirements", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md14", null ],
+      [ "Examples", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md15", [
+        [ "Basic Commit with Default Settings", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md16", null ],
+        [ "Full Workflow with All Features", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md17", null ]
+      ] ],
+      [ "Troubleshooting", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md18", [
+        [ "Common Issues", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.html#autotoc_md19", null ]
+      ] ]
+    ] ],
+    [ "Penify CLI - Configuration Commands", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html", [
+      [ "Configuration Overview", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md21", null ],
+      [ "Basic Usage", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md22", null ],
+      [ "LLM Configuration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md23", [
+        [ "Web Interface", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md24", null ],
+        [ "Supported LLMs", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md25", [
+          [ "OpenAI", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md26", null ],
+          [ "Anthropic", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md27", null ],
+          [ "Ollama (Local)", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md28", null ],
+          [ "Azure OpenAI", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md29", null ]
+        ] ],
+        [ "Configuration File Structure", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md30", null ]
+      ] ],
+      [ "JIRA Configuration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md31", [
+        [ "Web Interface", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md32", null ],
+        [ "Creating a JIRA API Token", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md33", null ],
+        [ "Configuration File Structure", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md34", null ]
+      ] ],
+      [ "Configuration Locations", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md35", null ],
+      [ "Environment Variables", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md36", null ],
+      [ "Command-Line Configuration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md37", null ],
+      [ "Sharing Configuration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md38", null ],
+      [ "Troubleshooting", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md39", [
+        [ "Common Issues", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html#autotoc_md40", null ]
+      ] ]
+    ] ],
+    [ "Penify CLI - Detailed Usage Guide", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html", [
+      [ "Table of Contents", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md42", null ],
+      [ "Authentication", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md43", [
+        [ "Login Process", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md44", null ],
+        [ "API Token Storage", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md45", null ],
+        [ "Token Precedence", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md46", null ]
+      ] ],
+      [ "Command Overview", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md47", null ],
+      [ "Commit Message Generation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md48", null ],
+      [ "Code Documentation Generation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md49", [
+        [ "Use Cases", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md50", null ],
+        [ "Authentication Requirement", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md51", null ]
+      ] ],
+      [ "Configuration Settings", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md52", null ],
+      [ "Git Hooks", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md53", [
+        [ "Post-Commit Hook", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md54", null ],
+        [ "Custom Hook Location", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md55", null ]
+      ] ],
+      [ "Advanced Use Cases", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md56", [
+        [ "CI/CD Integration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md57", null ],
+        [ "Remote Repository Documentation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md58", null ]
+      ] ],
+      [ "Troubleshooting", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md59", [
+        [ "Common Issues", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md60", null ],
+        [ "Logs", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md61", null ],
+        [ "Support", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html#autotoc_md62", null ]
+      ] ]
+    ] ],
+    [ "Penify CLI - Documentation Generation Commands", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html", [
+      [ "Table of Contents", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md64", null ],
+      [ "Basic Usage", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md65", null ],
+      [ "Command Options", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md66", [
+        [ "<tt>-l, --location</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md67", null ],
+        [ "Subcommands", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md68", [
+          [ "<tt>install-hook</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md69", null ],
+          [ "<tt>uninstall-hook</tt>", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md70", null ]
+        ] ]
+      ] ],
+      [ "Option Combinations", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md71", [
+        [ "Generate Documentation for Current Git Diff", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md72", null ],
+        [ "Generate Documentation for a Specific File", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md73", null ],
+        [ "Generate Documentation for a Folder", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md74", null ],
+        [ "Install Hook in Current Repository", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md75", null ],
+        [ "Install Hook in Specific Repository", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md76", null ],
+        [ "Uninstall Hook from Current Repository", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md77", null ],
+        [ "Uninstall Hook from Specific Repository", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md78", null ]
+      ] ],
+      [ "Git Hook Commands", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md79", [
+        [ "Hook Installation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md80", [
+          [ "How Hooks Work", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md81", null ],
+          [ "Hook Script Content", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md82", null ],
+          [ "Installation Location", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md83", null ],
+          [ "Installation Requirements", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md84", null ],
+          [ "Verifying Installation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md85", null ]
+        ] ],
+        [ "Hook Customization", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md86", [
+          [ "Modifying Hook Behavior", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md87", null ],
+          [ "Advanced Hook Scenarios", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md88", null ]
+        ] ],
+        [ "Hook Uninstallation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md89", [
+          [ "Standard Uninstallation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md90", null ],
+          [ "Specific Repository Uninstallation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md91", null ],
+          [ "Manual Hook Removal", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md92", null ],
+          [ "Verifying Uninstallation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md93", null ]
+        ] ]
+      ] ],
+      [ "Advanced Use Cases", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md94", [
+        [ "Continuous Integration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md95", null ],
+        [ "Batch Documentation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md96", null ],
+        [ "Custom Git Hook Integration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md97", null ],
+        [ "Documenting Release Tags", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md98", null ]
+      ] ],
+      [ "Troubleshooting", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md99", [
+        [ "Common Issues", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md100", null ],
+        [ "Debugging", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md101", null ],
+        [ "Getting Help", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html#autotoc_md102", null ]
+      ] ]
+    ] ],
+    [ "Penify CLI Example Workflows", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html", [
+      [ "Workflow 1: Efficient Git Commits with AI", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md104", [
+        [ "Setup", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md105", null ],
+        [ "Daily Workflow", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md106", null ],
+        [ "Benefits", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md107", null ]
+      ] ],
+      [ "Workflow 2: Documentation Generation Pipeline", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md108", [
+        [ "Setup", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md109", null ],
+        [ "Daily Workflow", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md110", null ],
+        [ "Manual Documentation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md111", null ],
+        [ "Benefits", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md112", null ]
+      ] ],
+      [ "Workflow 3: Code Review Enhancement", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md113", [
+        [ "Setup", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md114", null ],
+        [ "Workflow", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md115", null ],
+        [ "Benefits", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md116", null ]
+      ] ],
+      [ "Workflow 4: Onboarding New Team Members", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md117", [
+        [ "For Team Leads", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md118", null ],
+        [ "For New Team Members", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md119", null ],
+        [ "Benefits", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md120", null ]
+      ] ],
+      [ "Workflow 5: Legacy Code Understanding", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md121", [
+        [ "Benefits", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html#autotoc_md122", null ]
+      ] ]
+    ] ],
+    [ "Penify CLI Tool", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html", [
+      [ "Features", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md157", null ],
+      [ "Installation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md158", null ],
+      [ "Usage", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md159", null ],
+      [ "Basic Commands (No login required)", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md160", [
+        [ "Commit", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md161", null ],
+        [ "Config", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md162", null ]
+      ] ],
+      [ "Advanced Commands (Login required)", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md163", [
+        [ "Login", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md164", null ],
+        [ "Documentation Generation", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md165", null ],
+        [ "Git Hook Management", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md166", null ]
+      ] ],
+      [ "Authentication", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md167", null ],
+      [ "Local LLM Configuration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md168", null ],
+      [ "JIRA Integration", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md169", null ],
+      [ "Development", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md170", [
+        [ "Running Tests", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md171", null ]
+      ] ],
+      [ "License", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md172", null ],
+      [ "Author", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md173", null ],
+      [ "Contributing", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md174", null ],
+      [ "Issues", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md175", null ],
+      [ "Support", "md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.html#autotoc_md176", null ]
+    ] ],
+    [ "Namespaces", "namespaces.html", [
+      [ "Namespace List", "namespaces.html", "namespaces_dup" ],
+      [ "Namespace Members", "namespacemembers.html", [
+        [ "All", "namespacemembers.html", null ],
+        [ "Functions", "namespacemembers_func.html", null ],
+        [ "Variables", "namespacemembers_vars.html", null ]
+      ] ]
+    ] ],
+    [ "Classes", "annotated.html", [
+      [ "Class List", "annotated.html", "annotated_dup" ],
+      [ "Class Index", "classes.html", null ],
+      [ "Class Hierarchy", "hierarchy.html", "hierarchy" ],
+      [ "Class Members", "functions.html", [
+        [ "All", "functions.html", null ],
+        [ "Functions", "functions_func.html", null ],
+        [ "Variables", "functions_vars.html", null ]
+      ] ]
+    ] ],
+    [ "Files", "files.html", [
+      [ "File List", "files.html", "files_dup" ]
+    ] ]
+  ] ]
+];
+
+var NAVTREEINDEX =
+[
+"annotated.html",
+"jira__client_8py.html#a5593ea3415081eca1eea92e4c1ad1aa2",
+"namespacesetup.html#abead4f26b530856f858f0d44c7cf2588"
+];
+
+var SYNCONMSG = 'click to disable panel synchronisation';
+var SYNCOFFMSG = 'click to enable panel synchronisation';
\ No newline at end of file
diff --git a/docs/html/navtreeindex0.js b/docs/html/navtreeindex0.js
new file mode 100644
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new file mode 100644
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new file mode 100644
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new file mode 100644
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new file mode 100644
index 0000000..03626f6
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new file mode 100644
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+<head><title></title>
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+</head>
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+var searchResults = new SearchResults("searchResults");
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+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
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+/* @license-end */
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+</html>
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new file mode 100644
index 0000000..3a1e6d3
--- /dev/null
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+var searchData=
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+  ['base_5fanalyzer_2',['base_analyzer',['../namespacepenify__hook_1_1base__analyzer.html',1,'penify_hook']]],
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+  ['commit_5fcommands_5',['commit_commands',['../namespacepenify__hook_1_1commands_1_1commit__commands.html',1,'penify_hook::commands']]],
+  ['config_5fcommand_6',['config_command',['../namespacepenify__hook_1_1config__command.html',1,'penify_hook']]],
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new file mode 100644
index 0000000..a4b1530
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+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
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+/* @license-end */
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+</body>
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new file mode 100644
index 0000000..fdca1a8
--- /dev/null
+++ b/docs/html/search/namespaces_1.js
@@ -0,0 +1,4 @@
+var searchData=
+[
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+];
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new file mode 100644
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+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="namespaces_2.js"></script>
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+<script type="text/javascript">
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+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
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+/* @license-end */
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new file mode 100644
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new file mode 100644
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+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="search.js"></script>
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+<div id="SRIndex">
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new file mode 100644
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+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
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+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="pages_0.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/pages_0.js b/docs/html/search/pages_0.js
new file mode 100644
index 0000000..3cd36ca
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+++ b/docs/html/search/pages_0.js
@@ -0,0 +1,9 @@
+var searchData=
+[
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+  ['penify_20cli_20_2d_20configuration_20commands_1',['Penify CLI - Configuration Commands',['../md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.html',1,'']]],
+  ['penify_20cli_20_2d_20detailed_20usage_20guide_2',['Penify CLI - Detailed Usage Guide',['../md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.html',1,'']]],
+  ['penify_20cli_20_2d_20documentation_20generation_20commands_3',['Penify CLI - Documentation Generation Commands',['../md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.html',1,'']]],
+  ['penify_20cli_20example_20workflows_4',['Penify CLI Example Workflows',['../md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.html',1,'']]],
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new file mode 100644
index 0000000..648a792
--- /dev/null
+++ b/docs/html/search/search.css
@@ -0,0 +1,263 @@
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+#MSearchBox {
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+    z-index: 102;
+}
+
+#MSearchBox .left {
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+    vertical-align: middle;
+    height: 1.4em;
+}
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+    vertical-align: middle;
+    height: 19px;
+    padding: 0 0 0 0.3em;
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+    display: inline-block;
+    vertical-align: middle;
+    width: 7.5em;
+    height: 19px;
+    margin: 0 0.15em;
+    padding: 0;
+    line-height: 1em;
+    border:none;
+    color: #909090;
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+    font-family: Arial, Verdana, sans-serif;
+    -webkit-border-radius: 0px;
+    border-radius: 0px;
+    background: none;
+}
+
+@media(hover: none) {
+    /* to avoid zooming on iOS */
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+#MSearchBox .right {
+    display: inline-block;
+    vertical-align: middle;
+    width: 1.4em;
+    height: 1.4em;
+}
+
+#MSearchClose {
+    display: none;
+    font-size: inherit;
+    background : none;
+    border: none;
+    margin: 0;
+    padding: 0;
+    outline: none;
+
+}
+
+#MSearchCloseImg {
+    height: 1.4em;
+    padding: 0.3em;
+    margin: 0;
+}
+
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+}
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+}
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+}
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+    border: 1px solid #000;
+    background-color: #EEF1F7;
+    z-index:10000;
+}
+
+/* ----------------------------------- */
+
+
+#SRIndex {
+    clear:both; 
+    padding-bottom: 15px;
+}
+
+.SREntry {
+    font-size: 10pt;
+    padding-left: 1ex;
+}
+
+.SRPage .SREntry {
+    font-size: 8pt;
+    padding: 1px 5px;
+}
+
+body.SRPage {
+    margin: 5px 2px;
+}
+
+.SRChildren {
+    padding-left: 3ex; padding-bottom: .5em 
+}
+
+.SRPage .SRChildren {
+    display: none;
+}
+
+.SRSymbol {
+    font-weight: bold; 
+    color: #425E97;
+    font-family: Arial, Verdana, sans-serif;
+    text-decoration: none;
+    outline: none;
+}
+
+a.SRScope {
+    display: block;
+    color: #425E97; 
+    font-family: Arial, Verdana, sans-serif;
+    text-decoration: none;
+    outline: none;
+}
+
+a.SRSymbol:focus, a.SRSymbol:active,
+a.SRScope:focus, a.SRScope:active {
+    text-decoration: underline;
+}
+
+span.SRScope {
+    padding-left: 4px;
+    font-family: Arial, Verdana, sans-serif;
+}
+
+.SRPage .SRStatus {
+    padding: 2px 5px;
+    font-size: 8pt;
+    font-style: italic;
+    font-family: Arial, Verdana, sans-serif;
+}
+
+.SRResult {
+    display: none;
+}
+
+div.searchresults {
+    margin-left: 10px;
+    margin-right: 10px;
+}
+
+/*---------------- External search page results */
+
+.searchresult {
+    background-color: #F0F3F8;
+}
+
+.pages b {
+   color: white;
+   padding: 5px 5px 3px 5px;
+   background-image: url("../tab_a.png");
+   background-repeat: repeat-x;
+   text-shadow: 0 1px 1px #000000;
+}
+
+.pages {
+    line-height: 17px;
+    margin-left: 4px;
+    text-decoration: none;
+}
+
+.hl {
+    font-weight: bold;
+}
+
+#searchresults {
+    margin-bottom: 20px;
+}
+
+.searchpages {
+    margin-top: 10px;
+}
+
diff --git a/docs/html/search/search.js b/docs/html/search/search.js
new file mode 100644
index 0000000..607f4e1
--- /dev/null
+++ b/docs/html/search/search.js
@@ -0,0 +1,802 @@
+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+
+ The MIT License (MIT)
+
+ Copyright (C) 1997-2020 by Dimitri van Heesch
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+ and associated documentation files (the "Software"), to deal in the Software without restriction,
+ including without limitation the rights to use, copy, modify, merge, publish, distribute,
+ sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all copies or
+ substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
+ BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+ DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
+ */
+function convertToId(search)
+{
+  var result = '';
+  for (i=0;i<search.length;i++)
+  {
+    var c = search.charAt(i);
+    var cn = c.charCodeAt(0);
+    if (c.match(/[a-z0-9\u0080-\uFFFF]/))
+    {
+      result+=c;
+    }
+    else if (cn<16)
+    {
+      result+="_0"+cn.toString(16);
+    }
+    else
+    {
+      result+="_"+cn.toString(16);
+    }
+  }
+  return result;
+}
+
+function getXPos(item)
+{
+  var x = 0;
+  if (item.offsetWidth)
+  {
+    while (item && item!=document.body)
+    {
+      x   += item.offsetLeft;
+      item = item.offsetParent;
+    }
+  }
+  return x;
+}
+
+function getYPos(item)
+{
+  var y = 0;
+  if (item.offsetWidth)
+  {
+     while (item && item!=document.body)
+     {
+       y   += item.offsetTop;
+       item = item.offsetParent;
+     }
+  }
+  return y;
+}
+
+/* A class handling everything associated with the search panel.
+
+   Parameters:
+   name - The name of the global variable that will be
+          storing this instance.  Is needed to be able to set timeouts.
+   resultPath - path to use for external files
+*/
+function SearchBox(name, resultsPath, label, extension)
+{
+  if (!name || !resultsPath) {  alert("Missing parameters to SearchBox."); }
+  if (!extension || extension == "") { extension = ".html"; }
+
+  // ---------- Instance variables
+  this.name                  = name;
+  this.resultsPath           = resultsPath;
+  this.keyTimeout            = 0;
+  this.keyTimeoutLength      = 500;
+  this.closeSelectionTimeout = 300;
+  this.lastSearchValue       = "";
+  this.lastResultsPage       = "";
+  this.hideTimeout           = 0;
+  this.searchIndex           = 0;
+  this.searchActive          = false;
+  this.searchLabel           = label;
+  this.extension             = extension;
+
+  // ----------- DOM Elements
+
+  this.DOMSearchField = function()
+  {  return document.getElementById("MSearchField");  }
+
+  this.DOMSearchSelect = function()
+  {  return document.getElementById("MSearchSelect");  }
+
+  this.DOMSearchSelectWindow = function()
+  {  return document.getElementById("MSearchSelectWindow");  }
+
+  this.DOMPopupSearchResults = function()
+  {  return document.getElementById("MSearchResults");  }
+
+  this.DOMPopupSearchResultsWindow = function()
+  {  return document.getElementById("MSearchResultsWindow");  }
+
+  this.DOMSearchClose = function()
+  {  return document.getElementById("MSearchClose"); }
+
+  this.DOMSearchBox = function()
+  {  return document.getElementById("MSearchBox");  }
+
+  // ------------ Event Handlers
+
+  // Called when focus is added or removed from the search field.
+  this.OnSearchFieldFocus = function(isActive)
+  {
+    this.Activate(isActive);
+  }
+
+  this.OnSearchSelectShow = function()
+  {
+    var searchSelectWindow = this.DOMSearchSelectWindow();
+    var searchField        = this.DOMSearchSelect();
+
+    var left = getXPos(searchField);
+    var top  = getYPos(searchField);
+    top += searchField.offsetHeight;
+
+    // show search selection popup
+    searchSelectWindow.style.display='block';
+    searchSelectWindow.style.left =  left + 'px';
+    searchSelectWindow.style.top  =  top  + 'px';
+
+    // stop selection hide timer
+    if (this.hideTimeout)
+    {
+      clearTimeout(this.hideTimeout);
+      this.hideTimeout=0;
+    }
+    return false; // to avoid "image drag" default event
+  }
+
+  this.OnSearchSelectHide = function()
+  {
+    this.hideTimeout = setTimeout(this.name +".CloseSelectionWindow()",
+                                  this.closeSelectionTimeout);
+  }
+
+  // Called when the content of the search field is changed.
+  this.OnSearchFieldChange = function(evt)
+  {
+    if (this.keyTimeout) // kill running timer
+    {
+      clearTimeout(this.keyTimeout);
+      this.keyTimeout = 0;
+    }
+
+    var e  = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==40 || e.keyCode==13)
+    {
+      if (e.shiftKey==1)
+      {
+        this.OnSearchSelectShow();
+        var win=this.DOMSearchSelectWindow();
+        for (i=0;i<win.childNodes.length;i++)
+        {
+          var child = win.childNodes[i]; // get span within a
+          if (child.className=='SelectItem')
+          {
+            child.focus();
+            return;
+          }
+        }
+        return;
+      }
+      else
+      {
+        window.frames.MSearchResults.postMessage("take_focus", "*");
+      }
+    }
+    else if (e.keyCode==27) // Escape out of the search field
+    {
+      this.DOMSearchField().blur();
+      this.DOMPopupSearchResultsWindow().style.display = 'none';
+      this.DOMSearchClose().style.display = 'none';
+      this.lastSearchValue = '';
+      this.Activate(false);
+      return;
+    }
+
+    // strip whitespaces
+    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
+
+    if (searchValue != this.lastSearchValue) // search value has changed
+    {
+      if (searchValue != "") // non-empty search
+      {
+        // set timer for search update
+        this.keyTimeout = setTimeout(this.name + '.Search()',
+                                     this.keyTimeoutLength);
+      }
+      else // empty search field
+      {
+        this.DOMPopupSearchResultsWindow().style.display = 'none';
+        this.DOMSearchClose().style.display = 'none';
+        this.lastSearchValue = '';
+      }
+    }
+  }
+
+  this.SelectItemCount = function(id)
+  {
+    var count=0;
+    var win=this.DOMSearchSelectWindow();
+    for (i=0;i<win.childNodes.length;i++)
+    {
+      var child = win.childNodes[i]; // get span within a
+      if (child.className=='SelectItem')
+      {
+        count++;
+      }
+    }
+    return count;
+  }
+
+  this.SelectItemSet = function(id)
+  {
+    var i,j=0;
+    var win=this.DOMSearchSelectWindow();
+    for (i=0;i<win.childNodes.length;i++)
+    {
+      var child = win.childNodes[i]; // get span within a
+      if (child.className=='SelectItem')
+      {
+        var node = child.firstChild;
+        if (j==id)
+        {
+          node.innerHTML='&#8226;';
+        }
+        else
+        {
+          node.innerHTML='&#160;';
+        }
+        j++;
+      }
+    }
+  }
+
+  // Called when an search filter selection is made.
+  // set item with index id as the active item
+  this.OnSelectItem = function(id)
+  {
+    this.searchIndex = id;
+    this.SelectItemSet(id);
+    var searchValue = this.DOMSearchField().value.replace(/ +/g, "");
+    if (searchValue!="" && this.searchActive) // something was found -> do a search
+    {
+      this.Search();
+    }
+  }
+
+  this.OnSearchSelectKey = function(evt)
+  {
+    var e = (evt) ? evt : window.event; // for IE
+    if (e.keyCode==40 && this.searchIndex<this.SelectItemCount()) // Down
+    {
+      this.searchIndex++;
+      this.OnSelectItem(this.searchIndex);
+    }
+    else if (e.keyCode==38 && this.searchIndex>0) // Up
+    {
+      this.searchIndex--;
+      this.OnSelectItem(this.searchIndex);
+    }
+    else if (e.keyCode==13 || e.keyCode==27)
+    {
+      this.OnSelectItem(this.searchIndex);
+      this.CloseSelectionWindow();
+      this.DOMSearchField().focus();
+    }
+    return false;
+  }
+
+  // --------- Actions
+
+  // Closes the results window.
+  this.CloseResultsWindow = function()
+  {
+    this.DOMPopupSearchResultsWindow().style.display = 'none';
+    this.DOMSearchClose().style.display = 'none';
+    this.Activate(false);
+  }
+
+  this.CloseSelectionWindow = function()
+  {
+    this.DOMSearchSelectWindow().style.display = 'none';
+  }
+
+  // Performs a search.
+  this.Search = function()
+  {
+    this.keyTimeout = 0;
+
+    // strip leading whitespace
+    var searchValue = this.DOMSearchField().value.replace(/^ +/, "");
+
+    var code = searchValue.toLowerCase().charCodeAt(0);
+    var idxChar = searchValue.substr(0, 1).toLowerCase();
+    if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) // surrogate pair
+    {
+      idxChar = searchValue.substr(0, 2);
+    }
+
+    var resultsPage;
+    var resultsPageWithSearch;
+    var hasResultsPage;
+
+    var idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar);
+    if (idx!=-1)
+    {
+       var hexCode=idx.toString(16);
+       resultsPage = this.resultsPath + '/' + indexSectionNames[this.searchIndex] + '_' + hexCode + this.extension;
+       resultsPageWithSearch = resultsPage+'?'+escape(searchValue);
+       hasResultsPage = true;
+    }
+    else // nothing available for this search term
+    {
+       resultsPage = this.resultsPath + '/nomatches' + this.extension;
+       resultsPageWithSearch = resultsPage;
+       hasResultsPage = false;
+    }
+
+    window.frames.MSearchResults.location = resultsPageWithSearch;
+    var domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow();
+
+    if (domPopupSearchResultsWindow.style.display!='block')
+    {
+       var domSearchBox = this.DOMSearchBox();
+       this.DOMSearchClose().style.display = 'inline-block';
+       var domPopupSearchResults = this.DOMPopupSearchResults();
+       var left = getXPos(domSearchBox) + 150; // domSearchBox.offsetWidth;
+       var top  = getYPos(domSearchBox) + 20;  // domSearchBox.offsetHeight + 1;
+       domPopupSearchResultsWindow.style.display = 'block';
+       left -= domPopupSearchResults.offsetWidth;
+       var maxWidth = document.body.clientWidth;
+       var width = 400;
+       if (left<10) left=10;
+       if (width+left+8>maxWidth) width=maxWidth-left-8;
+       domPopupSearchResultsWindow.style.top     = top  + 'px';
+       domPopupSearchResultsWindow.style.left    = left + 'px';
+       domPopupSearchResultsWindow.style.width   = width + 'px';
+    }
+
+    this.lastSearchValue = searchValue;
+    this.lastResultsPage = resultsPage;
+  }
+
+  // -------- Activation Functions
+
+  // Activates or deactivates the search panel, resetting things to
+  // their default values if necessary.
+  this.Activate = function(isActive)
+  {
+    if (isActive || // open it
+        this.DOMPopupSearchResultsWindow().style.display == 'block'
+       )
+    {
+      this.DOMSearchBox().className = 'MSearchBoxActive';
+
+      var searchField = this.DOMSearchField();
+
+      if (searchField.value == this.searchLabel) // clear "Search" term upon entry
+      {
+        searchField.value = '';
+        this.searchActive = true;
+      }
+    }
+    else if (!isActive) // directly remove the panel
+    {
+      this.DOMSearchBox().className = 'MSearchBoxInactive';
+      this.DOMSearchField().value   = this.searchLabel;
+      this.searchActive             = false;
+      this.lastSearchValue          = ''
+      this.lastResultsPage          = '';
+    }
+  }
+}
+
+// -----------------------------------------------------------------------
+
+// The class that handles everything on the search results page.
+function SearchResults(name)
+{
+    // The number of matches from the last run of <Search()>.
+    this.lastMatchCount = 0;
+    this.lastKey = 0;
+    this.repeatOn = false;
+
+    // Toggles the visibility of the passed element ID.
+    this.FindChildElement = function(id)
+    {
+      var parentElement = document.getElementById(id);
+      var element = parentElement.firstChild;
+
+      while (element && element!=parentElement)
+      {
+        if (element.nodeName.toLowerCase() == 'div' && element.className == 'SRChildren')
+        {
+          return element;
+        }
+
+        if (element.nodeName.toLowerCase() == 'div' && element.hasChildNodes())
+        {
+           element = element.firstChild;
+        }
+        else if (element.nextSibling)
+        {
+           element = element.nextSibling;
+        }
+        else
+        {
+          do
+          {
+            element = element.parentNode;
+          }
+          while (element && element!=parentElement && !element.nextSibling);
+
+          if (element && element!=parentElement)
+          {
+            element = element.nextSibling;
+          }
+        }
+      }
+    }
+
+    this.Toggle = function(id)
+    {
+      var element = this.FindChildElement(id);
+      if (element)
+      {
+        if (element.style.display == 'block')
+        {
+          element.style.display = 'none';
+        }
+        else
+        {
+          element.style.display = 'block';
+        }
+      }
+    }
+
+    // Searches for the passed string.  If there is no parameter,
+    // it takes it from the URL query.
+    //
+    // Always returns true, since other documents may try to call it
+    // and that may or may not be possible.
+    this.Search = function(search)
+    {
+      if (!search) // get search word from URL
+      {
+        search = window.location.search;
+        search = search.substring(1);  // Remove the leading '?'
+        search = unescape(search);
+      }
+
+      search = search.replace(/^ +/, ""); // strip leading spaces
+      search = search.replace(/ +$/, ""); // strip trailing spaces
+      search = search.toLowerCase();
+      search = convertToId(search);
+
+      var resultRows = document.getElementsByTagName("div");
+      var matches = 0;
+
+      var i = 0;
+      while (i < resultRows.length)
+      {
+        var row = resultRows.item(i);
+        if (row.className == "SRResult")
+        {
+          var rowMatchName = row.id.toLowerCase();
+          rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_'
+
+          if (search.length<=rowMatchName.length &&
+             rowMatchName.substr(0, search.length)==search)
+          {
+            row.style.display = 'block';
+            matches++;
+          }
+          else
+          {
+            row.style.display = 'none';
+          }
+        }
+        i++;
+      }
+      document.getElementById("Searching").style.display='none';
+      if (matches == 0) // no results
+      {
+        document.getElementById("NoMatches").style.display='block';
+      }
+      else // at least one result
+      {
+        document.getElementById("NoMatches").style.display='none';
+      }
+      this.lastMatchCount = matches;
+      return true;
+    }
+
+    // return the first item with index index or higher that is visible
+    this.NavNext = function(index)
+    {
+      var focusItem;
+      while (1)
+      {
+        var focusName = 'Item'+index;
+        focusItem = document.getElementById(focusName);
+        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
+        {
+          break;
+        }
+        else if (!focusItem) // last element
+        {
+          break;
+        }
+        focusItem=null;
+        index++;
+      }
+      return focusItem;
+    }
+
+    this.NavPrev = function(index)
+    {
+      var focusItem;
+      while (1)
+      {
+        var focusName = 'Item'+index;
+        focusItem = document.getElementById(focusName);
+        if (focusItem && focusItem.parentNode.parentNode.style.display=='block')
+        {
+          break;
+        }
+        else if (!focusItem) // last element
+        {
+          break;
+        }
+        focusItem=null;
+        index--;
+      }
+      return focusItem;
+    }
+
+    this.ProcessKeys = function(e)
+    {
+      if (e.type == "keydown")
+      {
+        this.repeatOn = false;
+        this.lastKey = e.keyCode;
+      }
+      else if (e.type == "keypress")
+      {
+        if (!this.repeatOn)
+        {
+          if (this.lastKey) this.repeatOn = true;
+          return false; // ignore first keypress after keydown
+        }
+      }
+      else if (e.type == "keyup")
+      {
+        this.lastKey = 0;
+        this.repeatOn = false;
+      }
+      return this.lastKey!=0;
+    }
+
+    this.Nav = function(evt,itemIndex)
+    {
+      var e  = (evt) ? evt : window.event; // for IE
+      if (e.keyCode==13) return true;
+      if (!this.ProcessKeys(e)) return false;
+
+      if (this.lastKey==38) // Up
+      {
+        var newIndex = itemIndex-1;
+        var focusItem = this.NavPrev(newIndex);
+        if (focusItem)
+        {
+          var child = this.FindChildElement(focusItem.parentNode.parentNode.id);
+          if (child && child.style.display == 'block') // children visible
+          {
+            var n=0;
+            var tmpElem;
+            while (1) // search for last child
+            {
+              tmpElem = document.getElementById('Item'+newIndex+'_c'+n);
+              if (tmpElem)
+              {
+                focusItem = tmpElem;
+              }
+              else // found it!
+              {
+                break;
+              }
+              n++;
+            }
+          }
+        }
+        if (focusItem)
+        {
+          focusItem.focus();
+        }
+        else // return focus to search field
+        {
+           parent.document.getElementById("MSearchField").focus();
+        }
+      }
+      else if (this.lastKey==40) // Down
+      {
+        var newIndex = itemIndex+1;
+        var focusItem;
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem && elem.style.display == 'block') // children visible
+        {
+          focusItem = document.getElementById('Item'+itemIndex+'_c0');
+        }
+        if (!focusItem) focusItem = this.NavNext(newIndex);
+        if (focusItem)  focusItem.focus();
+      }
+      else if (this.lastKey==39) // Right
+      {
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem) elem.style.display = 'block';
+      }
+      else if (this.lastKey==37) // Left
+      {
+        var item = document.getElementById('Item'+itemIndex);
+        var elem = this.FindChildElement(item.parentNode.parentNode.id);
+        if (elem) elem.style.display = 'none';
+      }
+      else if (this.lastKey==27) // Escape
+      {
+        parent.searchBox.CloseResultsWindow();
+        parent.document.getElementById("MSearchField").focus();
+      }
+      else if (this.lastKey==13) // Enter
+      {
+        return true;
+      }
+      return false;
+    }
+
+    this.NavChild = function(evt,itemIndex,childIndex)
+    {
+      var e  = (evt) ? evt : window.event; // for IE
+      if (e.keyCode==13) return true;
+      if (!this.ProcessKeys(e)) return false;
+
+      if (this.lastKey==38) // Up
+      {
+        if (childIndex>0)
+        {
+          var newIndex = childIndex-1;
+          document.getElementById('Item'+itemIndex+'_c'+newIndex).focus();
+        }
+        else // already at first child, jump to parent
+        {
+          document.getElementById('Item'+itemIndex).focus();
+        }
+      }
+      else if (this.lastKey==40) // Down
+      {
+        var newIndex = childIndex+1;
+        var elem = document.getElementById('Item'+itemIndex+'_c'+newIndex);
+        if (!elem) // last child, jump to parent next parent
+        {
+          elem = this.NavNext(itemIndex+1);
+        }
+        if (elem)
+        {
+          elem.focus();
+        }
+      }
+      else if (this.lastKey==27) // Escape
+      {
+        parent.searchBox.CloseResultsWindow();
+        parent.document.getElementById("MSearchField").focus();
+      }
+      else if (this.lastKey==13) // Enter
+      {
+        return true;
+      }
+      return false;
+    }
+}
+
+function setKeyActions(elem,action)
+{
+  elem.setAttribute('onkeydown',action);
+  elem.setAttribute('onkeypress',action);
+  elem.setAttribute('onkeyup',action);
+}
+
+function setClassAttr(elem,attr)
+{
+  elem.setAttribute('class',attr);
+  elem.setAttribute('className',attr);
+}
+
+function createResults()
+{
+  var results = document.getElementById("SRResults");
+  for (var e=0; e<searchData.length; e++)
+  {
+    var id = searchData[e][0];
+    var srResult = document.createElement('div');
+    srResult.setAttribute('id','SR_'+id);
+    setClassAttr(srResult,'SRResult');
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+    setClassAttr(srEntry,'SREntry');
+    var srLink = document.createElement('a');
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+    setClassAttr(srLink,'SRSymbol');
+    srLink.innerHTML = searchData[e][1][0];
+    srEntry.appendChild(srLink);
+    if (searchData[e][1].length==2) // single result
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+      srLink.setAttribute('href',searchData[e][1][1][0]);
+      srLink.setAttribute('onclick','parent.searchBox.CloseResultsWindow()');
+      if (searchData[e][1][1][1])
+      {
+       srLink.setAttribute('target','_parent');
+      }
+      else
+      {
+       srLink.setAttribute('target','_blank');
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+      setClassAttr(srScope,'SRScope');
+      srScope.innerHTML = searchData[e][1][1][2];
+      srEntry.appendChild(srScope);
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+    else // multiple results
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+      srLink.setAttribute('href','javascript:searchResults.Toggle("SR_'+id+'")');
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+      }
+      srEntry.appendChild(srChildren);
+    }
+    srResult.appendChild(srEntry);
+    results.appendChild(srResult);
+  }
+}
+
+function init_search()
+{
+  var results = document.getElementById("MSearchSelectWindow");
+  for (var key in indexSectionLabels)
+  {
+    var link = document.createElement('a');
+    link.setAttribute('class','SelectItem');
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+    link.href='javascript:void(0)';
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+    results.appendChild(link);
+  }
+  searchBox.OnSelectItem(0);
+}
+/* @license-end */
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diff --git a/docs/html/search/searchdata.js b/docs/html/search/searchdata.js
new file mode 100644
index 0000000..37552a5
--- /dev/null
+++ b/docs/html/search/searchdata.js
@@ -0,0 +1,33 @@
+var indexSectionsWithContent =
+{
+  0: "_abcdefghijlmnprstuvw",
+  1: "abcefgjlt",
+  2: "pst",
+  3: "_abcdefghjlmprstu",
+  4: "_acefghilmprstu",
+  5: "_abcdefhijlmnprsuvw",
+  6: "p"
+};
+
+var indexSectionNames =
+{
+  0: "all",
+  1: "classes",
+  2: "namespaces",
+  3: "files",
+  4: "functions",
+  5: "variables",
+  6: "pages"
+};
+
+var indexSectionLabels =
+{
+  0: "All",
+  1: "Classes",
+  2: "Namespaces",
+  3: "Files",
+  4: "Functions",
+  5: "Variables",
+  6: "Pages"
+};
+
diff --git a/docs/html/search/variables_0.html b/docs/html/search/variables_0.html
new file mode 100644
index 0000000..fd893a6
--- /dev/null
+++ b/docs/html/search/variables_0.html
@@ -0,0 +1,37 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_0.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/variables_0.js b/docs/html/search/variables_0.js
new file mode 100644
index 0000000..ee0a9ff
--- /dev/null
+++ b/docs/html/search/variables_0.js
@@ -0,0 +1,4 @@
+var searchData=
+[
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+];
diff --git a/docs/html/search/variables_1.html b/docs/html/search/variables_1.html
new file mode 100644
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+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_1.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/variables_1.js b/docs/html/search/variables_1.js
new file mode 100644
index 0000000..a34ece5
--- /dev/null
+++ b/docs/html/search/variables_1.js
@@ -0,0 +1,10 @@
+var searchData=
+[
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+  ['api_5furl_1',['api_url',['../classpenify__hook_1_1api__client_1_1APIClient.html#a130cf688ed35dc0e8cbd8320b6b2d872',1,'penify_hook::api_client::APIClient']]],
+  ['api_5furl_2',['API_URL',['../namespacepenify__hook_1_1constants.html#af198b5d1fc2f44657a2061aa324af3e0',1,'penify_hook::constants']]],
+  ['auth_5ftoken_3',['AUTH_TOKEN',['../classpenify__hook_1_1api__client_1_1APIClient.html#a5bb502603717946ad710b49ad9d95237',1,'penify_hook::api_client::APIClient']]],
+  ['author_4',['author',['../namespacesetup.html#a3a57a4772d418a06835249cbade0d86a',1,'setup']]],
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+];
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new file mode 100644
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+++ b/docs/html/search/variables_10.html
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+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_10.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/variables_10.js b/docs/html/search/variables_10.js
new file mode 100644
index 0000000..28d0871
--- /dev/null
+++ b/docs/html/search/variables_10.js
@@ -0,0 +1,4 @@
+var searchData=
+[
+  ['url_0',['url',['../namespacesetup.html#afc13124aa5c0124e84e1d965e3f4b0fb',1,'setup']]]
+];
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new file mode 100644
index 0000000..47f1ec5
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_11.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/variables_11.js b/docs/html/search/variables_11.js
new file mode 100644
index 0000000..d9621d9
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+var searchData=
+[
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+];
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new file mode 100644
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+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_12.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
+</script>
+<div class="SRStatus" id="Searching">Searching...</div>
+<div class="SRStatus" id="NoMatches">No Matches</div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+document.getElementById("Loading").style.display="none";
+document.getElementById("NoMatches").style.display="none";
+var searchResults = new SearchResults("searchResults");
+searchResults.Search();
+window.addEventListener("message", function(event) {
+  if (event.data == "take_focus") {
+    var elem = searchResults.NavNext(0);
+    if (elem) elem.focus();
+  }
+});
+/* @license-end */
+</script>
+</div>
+</body>
+</html>
diff --git a/docs/html/search/variables_12.js b/docs/html/search/variables_12.js
new file mode 100644
index 0000000..10d696f
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+++ b/docs/html/search/variables_12.js
@@ -0,0 +1,5 @@
+var searchData=
+[
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+  ['warning_5fsymbol_1',['WARNING_SYMBOL',['../namespacepenify__hook_1_1ui__utils.html#a6eaea98f1a8cbe16a181647da2fc0a16',1,'penify_hook::ui_utils']]]
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new file mode 100644
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head><title></title>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta name="generator" content="Doxygen 1.9.4"/>
+<link rel="stylesheet" type="text/css" href="search.css"/>
+<script type="text/javascript" src="variables_2.js"></script>
+<script type="text/javascript" src="search.js"></script>
+</head>
+<body class="SRPage">
+<div id="SRIndex">
+<div class="SRStatus" id="Loading">Loading...</div>
+<div id="SRResults"></div>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&amp;dn=expat.txt MIT */
+createResults();
+/* @license-end */
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+<div class="SRStatus" id="Searching">Searching...</div>
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+</div><!-- contents -->
+</div><!-- doc-content -->
+<!-- HTML footer for doxygen 1.10.0-->
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+    <li class="navelem"><a class="el" href="dir_b3b22d2ab7966b65f6b237e3231b41be.html">penify-cli</a></li><li class="navelem"><a class="el" href="setup_8py.html">setup.py</a></li>
+    <li class="footer">Generated by <a href="https://penify.dev/"><img class="footer" src="https://www.penify.dev/_next/static/media/snorkell-dark-logo.9fa414f5.svg" width="104" height="31" alt="doxygen"/></a> </li>
+  </ul>
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+</body>
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+    [ "entry_points", "setup_8py.html#ada7058afc98897f073d3f3b8b9157059", null ],
+    [ "install_requires", "setup_8py.html#abead4f26b530856f858f0d44c7cf2588", null ],
+    [ "long_description", "setup_8py.html#a4cda9dbfb952875376a0749fe08a5bde", null ],
+    [ "long_description_content_type", "setup_8py.html#a3796ea10c998699d07d391414ff5d720", null ],
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+    [ "url", "setup_8py.html#afc13124aa5c0124e84e1d965e3f4b0fb", null ],
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diff --git a/docs/html/svgpan.js b/docs/html/svgpan.js
new file mode 100644
index 0000000..2678d38
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+++ b/docs/html/svgpan.js
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+/*
+ @licstart  The following is the entire license notice for the JavaScript code in this file.
+ The code below is based on SVGPan Library 1.2 and was modified for doxygen
+ to support both zooming and panning via the mouse and via embedded buttons.
+
+ This code is licensed under the following BSD license:
+
+ Copyright 2009-2010 Andrea Leofreddi <a.leofreddi@itcharm.com>. All rights reserved.
+
+ Redistribution and use in source and binary forms, with or without modification, are
+ permitted provided that the following conditions are met:
+
+    1. Redistributions of source code must retain the above copyright notice, this list of
+       conditions and the following disclaimer.
+
+    2. Redistributions in binary form must reproduce the above copyright notice, this list
+       of conditions and the following disclaimer in the documentation and/or other materials
+       provided with the distribution.
+
+ THIS SOFTWARE IS PROVIDED BY Andrea Leofreddi ``AS IS'' AND ANY EXPRESS OR IMPLIED
+ WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND
+ FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL Andrea Leofreddi OR
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
+ ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+ The views and conclusions contained in the software and documentation are those of the
+ authors and should not be interpreted as representing official policies, either expressed
+ or implied, of Andrea Leofreddi.
+
+ @licend  The above is the entire license notice for the JavaScript code in this file
+ */
+
+var root = document.documentElement;
+var state = 'none';
+var stateOrigin;
+var stateTf = root.createSVGMatrix();
+var cursorGrab = ' url("data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAA4AAAAOCAMAAAAolt3jAAAAGXRFWHRTb2Z0d2FyZQBBZG9iZSBJbWFnZVJlYWR5ccllPAAAAAlQTFRFAAAA////////c3ilYwAAAAN0Uk5T//8A18oNQQAAAD1JREFUeNp0zlEKACAIA9Bt9z90bZBZkQj29qFBEuBOzQHSnWTTyckEfqUuZgFvslH4ch3qLCO/Kr8cAgwATw4Ax6XRCcoAAAAASUVORK5CYII="), move';
+var zoomSteps = 10;
+var zoomInFactor;
+var zoomOutFactor;
+var windowWidth;
+var windowHeight;
+var svgDoc;
+var minZoom;
+var maxZoom;
+if (!window) window=this;
+
+/**
+ * Show the graph in the middle of the view, scaled to fit
+ */
+function show()
+{
+  if (window.innerHeight) // Firefox
+  {
+    windowWidth = window.innerWidth;
+    windowHeight = window.innerHeight;
+  }
+  else if (document.documentElement.clientWidth) // Chrome/Safari
+  {
+    windowWidth = document.documentElement.clientWidth
+    windowHeight = document.documentElement.clientHeight
+  }
+  if (!windowWidth || !windowHeight) // failsafe
+  {
+    windowWidth = 800;
+    windowHeight = 600;
+  }
+  minZoom = Math.min(Math.min(viewHeight,windowHeight)/viewHeight,Math.min(viewWidth,windowWidth)/viewWidth);
+  maxZoom = minZoom+1.5;
+  zoomInFactor = Math.pow(maxZoom/minZoom,1.0/zoomSteps);
+  zoomOutFactor = 1.0/zoomInFactor;
+
+  var g = svgDoc.getElementById('viewport');
+  try
+  {
+    var bb = g.getBBox(); // this can throw an exception if css { display: none }
+    var tx = (windowWidth-viewWidth*minZoom+8)/(2*minZoom);
+    var ty = viewHeight+(windowHeight-viewHeight*minZoom)/(2*minZoom);
+    var a = 'scale('+minZoom+') rotate(0) translate('+tx+' '+ty+')';
+    g.setAttribute('transform',a);
+  }
+  catch(e) {}
+}
+
+/**
+ * Register handlers
+ */
+function init(evt)
+{
+  svgDoc = evt.target.ownerDocument;
+  try {
+    if (top.window && top.window.registerShow) { // register show function in html doc for dynamic sections
+      top.window.registerShow(sectionId,show);
+    }
+  } catch(e) {
+    // ugh, we are not allowed to talk to the parent; can happen with Chrome when viewing pages
+    // locally, since they treat every local page as having a different origin
+  }
+  show();
+
+  setAttributes(root, {
+     "onmousedown" : "handleMouseDown(evt)",
+     "onmousemove" : "handleMouseMove(evt)",
+     "onmouseup"   : "handleMouseUp(evt)"
+  });
+
+  if (window.addEventListener)
+  {
+    if (navigator.userAgent.toLowerCase().indexOf('webkit') >= 0 ||
+        navigator.userAgent.toLowerCase().indexOf("opera") >= 0 ||
+        navigator.appVersion.indexOf("MSIE") != -1)
+    {
+      window.addEventListener('mousewheel', handleMouseWheel, false); // Chrome/Safari/IE9
+    }
+    else
+    {
+      window.addEventListener('DOMMouseScroll', handleMouseWheel, false); // Others
+    }
+  }
+}
+
+window.onresize=function()
+{
+  if (svgDoc) { show(); }
+}
+
+/**
+ * Instance an SVGPoint object with given event coordinates.
+ */
+function getEventPoint(evt)
+{
+  var p = root.createSVGPoint();
+  p.x = evt.clientX;
+  p.y = evt.clientY;
+  return p;
+}
+
+/**
+ * Sets the current transform matrix of an element.
+ */
+function setCTM(element, matrix)
+{
+  var s = "matrix(" + matrix.a + "," + matrix.b + "," + matrix.c + "," + matrix.d + "," + matrix.e + "," + matrix.f + ")";
+  element.setAttribute("transform", s);
+}
+
+/**
+ * Sets attributes of an element.
+ */
+function setAttributes(element, attributes)
+{
+  for (i in attributes)
+    element.setAttributeNS(null, i, attributes[i]);
+}
+
+function doZoom(g,point,zoomFactor)
+{
+  var p = point.matrixTransform(g.getCTM().inverse());
+  var k = root.createSVGMatrix().translate(p.x, p.y).scale(zoomFactor).translate(-p.x, -p.y);
+  var n = g.getCTM().multiply(k);
+  var s = Math.max(n.a,n.d);
+  if      (s>maxZoom) n=n.translate(p.x,p.y).scale(maxZoom/s).translate(-p.x,-p.y);
+  else if (s<minZoom) n=n.translate(p.x,p.y).scale(minZoom/s).translate(-p.x,-p.y);
+  setCTM(g, n);
+  stateTf = stateTf.multiply(n.inverse());
+}
+
+/**
+ * Handle mouse move event.
+ */
+function handleMouseWheel(evt)
+{
+  if (!evt) evt = window.evt;
+  if (!evt.shiftKey) return; // only zoom when shift is pressed
+  if (evt.preventDefault) evt.preventDefault();
+  evt.returnValue = false;
+
+  if (state!='pan')
+  {
+    var delta;
+    if (evt.wheelDelta)
+    {
+      delta = evt.wheelDelta / 7200; // Opera/Chrome/IE9/Safari
+    }
+    else
+    {
+      delta = evt.detail / -180; // Mozilla
+    }
+    var svgDoc = evt.target.ownerDocument;
+    var g = svgDoc.getElementById("viewport");
+    var p = getEventPoint(evt);
+    doZoom(g,p,1+delta);
+  }
+}
+
+/**
+ * Handle mouse move event.
+ */
+function handleMouseMove(evt)
+{
+  if(evt.preventDefault)
+    evt.preventDefault();
+
+  evt.returnValue = false;
+
+  var g = svgDoc.getElementById("viewport");
+
+  if (state == 'pan')
+  {
+    // Pan mode
+    var p = getEventPoint(evt).matrixTransform(stateTf);
+    setCTM(g,stateTf.inverse().translate(p.x - stateOrigin.x, p.y - stateOrigin.y));
+  }
+}
+
+/**
+ * Handle click event.
+ */
+function handleMouseDown(evt)
+{
+  if(evt.preventDefault)
+    evt.preventDefault();
+  evt.returnValue = false;
+  var g = svgDoc.getElementById("viewport");
+  state = 'pan';
+  stateTf = g.getCTM().inverse();
+  stateOrigin = getEventPoint(evt).matrixTransform(stateTf);
+  g.style.cursor = cursorGrab;
+}
+
+/**
+ * Handle mouse button release event.
+ */
+function handleMouseUp(evt)
+{
+  if (evt.preventDefault) evt.preventDefault();
+  evt.returnValue = false;
+  var g = svgDoc.getElementById("viewport");
+  g.style.cursor = "default";
+  // Quit pan mode
+  state = '';
+}
+
+/**
+ * Dumps a matrix to a string (useful for debug).
+ */
+function dumpMatrix(matrix)
+{
+  var s = "[ " + matrix.a + ", " + matrix.c + ", " + matrix.e + "\n  " + matrix.b + ", " + matrix.d + ", " + matrix.f + "\n  0, 0, 1 ]";
+  return s;
+}
+
+/**
+ * Handler for pan buttons
+ */
+function handlePan(x,y)
+{
+  var g = svgDoc.getElementById("viewport");
+  setCTM(g,g.getCTM().translate(x*20/minZoom,y*20/minZoom));
+}
+
+/**
+ * Handle reset button
+ */
+function handleReset()
+{
+  show();
+}
+
+/**
+ * Handler for zoom buttons
+ */
+function handleZoom(evt,direction)
+{
+  var g = svgDoc.getElementById("viewport");
+  var factor = direction=='in' ? zoomInFactor : zoomOutFactor;
+  var m = g.getCTM();
+  var p = root.createSVGPoint();
+  p.x = windowWidth/2;
+  p.y = windowHeight/2;
+  doZoom(g,p,factor);
+}
+
+function serializeXmlNode(xmlNode)
+{
+  if (typeof window.XMLSerializer != "undefined") {
+    return (new window.XMLSerializer()).serializeToString(xmlNode);
+  } else if (typeof xmlNode.xml != "undefined") {
+    return xmlNode.xml;
+  }
+  return "";
+}
+
+/**
+ * Handler for print function
+ */
+function handlePrint(evt)
+{
+  evt.returnValue = false;
+  var g = svgDoc.getElementById("graph");
+  var xs = serializeXmlNode(g);
+  try {
+    var w = window.open('about:blank','_blank','width='+windowWidth+',height='+windowHeight+
+                        ',toolbar=0,status=0,menubar=0,scrollbars=0,resizable=0,location=0,directories=0');
+    var d = w.document;
+    d.write('<html xmlns="http://www.w3.org/1999/xhtml" '+
+            'xmlns:svg="http://www.w3.org/2000/svg" '+
+            'xmlns:xlink="http://www.w3.org/1999/xlink">');
+    d.write('<head><title>Print SVG</title></head>');
+    d.write('<body style="margin: 0px; padding: 0px;" onload="window.print();">');
+    d.write('<div id="svg" style="width:'+windowWidth+'px; height:'+windowHeight+'px;">'+xs+'</div>');
+    d.write('</body>');
+    d.write('</html>');
+    d.close();
+  } catch(e) {
+    alert('Failed to open popup window needed for printing!\n'+e.message);
+  }
+}
+/* @license-end */
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new file mode 100644
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new file mode 100644
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+<!-- Node1 -->
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diff --git a/docs/rtf/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5 b/docs/rtf/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5
new file mode 100644
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+++ b/docs/rtf/classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.md5
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new file mode 100644
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+<!-- Node1&#45;&gt;Node2 -->
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diff --git a/docs/rtf/classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_icgraph.md5 b/docs/rtf/classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_icgraph.md5
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diff --git a/docs/rtf/classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_cgraph.md5 b/docs/rtf/classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_cgraph.md5
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+}
+{\info 
+{\title {\comment penify-cli }penify-cli}
+{\comment Generated by doxygen 1.9.4.}
+{\creatim \yr2025\mo5\dy15\hr8\min8\sec59}
+}\pard\plain 
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+\par
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+\pard\plain \s16\qc\sa60\widctlpar\outlinelevel1\adjustright \f1\cgrid 
+{\field\fldedit {\*\fldinst AUTHOR \\*MERGEFORMAT}{\fldrslt AUTHOR}}\par
+Version \par{\field\fldedit {\*\fldinst CREATEDATE \\*MERGEFORMAT}{\fldrslt Thu May 15 2025 }}\par
+\page\page\vertalt
+\pard\plain 
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid Table of Contents\par
+\pard\plain \par
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+
+\pard\plain \sect\sbkpage
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+Penify CLI - Commit Commands{\tc \v Penify CLI - Commit Commands}\par \pard\plain 
+{\bkmkstart AAAAAAAAPB}
+{\bkmkend AAAAAAAAPB}
+\par \pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+The {\f2 commit}  command allows you to generate smart, AI-powered commit messages for your Git changes. This document explains all available options and combinations.\par
+{\bkmkstart AAAAAAAABJ}
+{\bkmkend AAAAAAAABJ}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Basic Usage
+\par}
+{\tc\tcl2 \v Basic Usage}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit\par
+}
+\par
+By default, this command:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Analyzes your staged Git changes\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Generates a concise commit title only\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Uses local LLM if configured, or falls back to Penify API\par}
+\par
+\par}
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+{\bkmkend AAAAAAAABK}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Command Options
+\par}
+{\tc\tcl2 \v Command Options}
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+{\bkmkend AAAAAAAABL}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+<tt>-m, --message</tt>
+\par}
+{\tc\tcl3 \v <tt>-m, --message</tt>}
+Provide context for the commit message generation:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -m "Fix login flow"\par
+}
+\par
+This hint helps the AI understand your intention and improves the quality of the generated message.\par}
+{\bkmkstart AAAAAAAABM}
+{\bkmkend AAAAAAAABM}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+<tt>-e, --terminal</tt>
+\par}
+{\tc\tcl3 \v <tt>-e, --terminal</tt>}
+Open an editor to review and edit the generated commit message before committing:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -e\par
+}
+\par
+This opens your default Git editor with the generated message for review.\par}
+{\bkmkstart AAAAAAAABN}
+{\bkmkend AAAAAAAABN}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+<tt>-d, --description</tt>
+\par}
+{\tc\tcl3 \v <tt>-d, --description</tt>}
+Generate a detailed commit message with both title and description:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -d\par
+}
+\par
+Without this flag, only the commit title is generated.\par}
+\par}
+{\bkmkstart AAAAAAAABO}
+{\bkmkend AAAAAAAABO}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Option Combinations
+\par}
+{\tc\tcl2 \v Option Combinations}
+You can combine these options for different workflows:\par
+{\bkmkstart AAAAAAAABP}
+{\bkmkend AAAAAAAABP}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate Title Only with Context
+\par}
+{\tc\tcl3 \v Generate Title Only with Context}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -m "Update login UI"\par
+}
+\par}
+{\bkmkstart AAAAAAAABQ}
+{\bkmkend AAAAAAAABQ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate Title and Description with Context
+\par}
+{\tc\tcl3 \v Generate Title and Description with Context}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -m "Update login UI" -d\par
+}
+\par}
+{\bkmkstart AAAAAAAABR}
+{\bkmkend AAAAAAAABR}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate and Edit Full Commit Message
+\par}
+{\tc\tcl3 \v Generate and Edit Full Commit Message}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -d -e\par
+}
+\par}
+{\bkmkstart AAAAAAAABS}
+{\bkmkend AAAAAAAABS}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate, Edit, and Provide Context
+\par}
+{\tc\tcl3 \v Generate, Edit, and Provide Context}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit -m "Refactor authentication" -d -e\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAABT}
+{\bkmkend AAAAAAAABT}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+LLM and JIRA Integration
+\par}
+{\tc\tcl2 \v LLM and JIRA Integration}
+{\bkmkstart AAAAAAAABU}
+{\bkmkend AAAAAAAABU}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Using Local LLM
+\par}
+{\tc\tcl3 \v Using Local LLM}
+If you've configured a local LLM using {\f2 penify config llm} , the commit command will automatically use it for message generation.\par
+Benefits:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Privacy: your code changes don't leave your machine\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Speed: no network latency\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Works offline\par}
+\par
+\par}
+{\bkmkstart AAAAAAAABV}
+{\bkmkend AAAAAAAABV}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+JIRA Enhancement
+\par}
+{\tc\tcl3 \v JIRA Enhancement}
+If you've configured JIRA integration using {\f2 penify config jira} , the commit command will:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Detect JIRA issue references in your changes\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Fetch issue details from your JIRA instance\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Include issue information in the commit message\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+4.\tab Format the commit message according to JIRA's smart commit format\par}
+\par
+Example output: {
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid PROJ-123: Fix authentication bug in login flow\par
+\par
+- Updated OAuth token validation\par
+- Fixed session timeout handling\par
+- Added unit tests for edge cases\par
+\par
+[PROJ-123]\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAABW}
+{\bkmkend AAAAAAAABW}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Configuration Requirements
+\par}
+{\tc\tcl2 \v Configuration Requirements}
+For the {\f2 commit}  command to work:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab You must have configured either:{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Local LLM via {\f2 penify config llm} , OR\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Logged in via {\f2 penify login} \par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab For JIRA enhancement (optional):{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Configure JIRA via {\f2 penify config jira} \par}
+}
+\par
+\par}
+{\bkmkstart AAAAAAAABX}
+{\bkmkend AAAAAAAABX}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Examples
+\par}
+{\tc\tcl2 \v Examples}
+{\bkmkstart AAAAAAAABY}
+{\bkmkend AAAAAAAABY}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Basic Commit with Default Settings
+\par}
+{\tc\tcl3 \v Basic Commit with Default Settings}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Stage your changes\par
+git add .\par
+\par
+# Generate commit message\par
+penify commit\par
+\par
+# Commit with the generated message\par
+git commit -m "Generated message here"\par
+}
+\par}
+{\bkmkstart AAAAAAAABZ}
+{\bkmkend AAAAAAAABZ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Full Workflow with All Features
+\par}
+{\tc\tcl3 \v Full Workflow with All Features}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Stage your changes\par
+git add .\par
+\par
+# Generate detailed commit message with JIRA integration, \par
+# provide context, and open editor for review\par
+penify commit -m "Fix login issue" -d -e\par
+\par
+# The commit is automatically completed after you save and exit the editor\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAACA}
+{\bkmkend AAAAAAAACA}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Troubleshooting
+\par}
+{\tc\tcl2 \v Troubleshooting}
+{\bkmkstart AAAAAAAACB}
+{\bkmkend AAAAAAAACB}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Common Issues
+\par}
+{\tc\tcl3 \v Common Issues}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab **"No LLM model or API token provided"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Run {\f2 penify config llm}  to configure a local LLM, or\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Run {\f2 penify login}  to authenticate with Penify\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab **"Failed to connect to JIRA"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check your JIRA configuration with {\f2 cat ~/.penify} \par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Verify your network connection\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure your JIRA credentials are valid\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab **"Error initializing LLM client"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Verify your LLM configuration settings\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure the LLM API is accessible \par}
+}
+\par
+\par}
+\par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Penify CLI - Configuration Commands{\tc \v Penify CLI - Configuration Commands}\par \pard\plain 
+{\bkmkstart AAAAAAAAPC}
+{\bkmkend AAAAAAAAPC}
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+The {\f2 config}  command allows you to set up and manage configuration settings for Penify CLI. This document explains all available configuration options and how to use them.\par
+{\bkmkstart AAAAAAAACC}
+{\bkmkend AAAAAAAACC}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Configuration Overview
+\par}
+{\tc\tcl2 \v Configuration Overview}
+Penify CLI stores configuration in a JSON file at {\f2 ~/.penify/config.json} . The configuration includes:\par
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+LLM (Large Language Model) settings for local commit message generation\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+JIRA integration settings for enhanced commit messages\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API tokens and other credentials\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACD}
+{\bkmkend AAAAAAAACD}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Basic Usage
+\par}
+{\tc\tcl2 \v Basic Usage}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Configure LLM settings\par
+penify config llm\par
+\par
+# Configure JIRA integration\par
+penify config jira\par
+}
+\par}
+{\bkmkstart AAAAAAAACE}
+{\bkmkend AAAAAAAACE}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+LLM Configuration
+\par}
+{\tc\tcl2 \v LLM Configuration}
+{\bkmkstart AAAAAAAACF}
+{\bkmkend AAAAAAAACF}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Web Interface
+\par}
+{\tc\tcl3 \v Web Interface}
+Running {\f2 penify config llm}  opens a web interface in your browser where you can configure:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab {\b Model} : The LLM model to use (e.g., {\f2 gpt-3.5-turbo} )\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab {\b API Base URL} : The endpoint URL for your LLM API (e.g., {\f2 {\f2 https://api.openai.com/v1}} )\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab {\b API Key} : Your authentication key for the LLM API\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACG}
+{\bkmkend AAAAAAAACG}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Supported LLMs
+\par}
+{\tc\tcl3 \v Supported LLMs}
+Penify CLI supports various LLM providers:\par
+{\bkmkstart AAAAAAAACH}
+{\bkmkend AAAAAAAACH}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+OpenAI
+\par}
+{\tc\tcl4 \v OpenAI}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Model: {\f2 gpt-3.5-turbo}  or {\f2 gpt-4} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Base: {\f2 {\f2 https://api.openai.com/v1}} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Key: Your OpenAI API key\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACI}
+{\bkmkend AAAAAAAACI}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Anthropic
+\par}
+{\tc\tcl4 \v Anthropic}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Model: {\f2 claude-instant-1}  or {\f2 claude-2} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Base: {\f2 {\f2 https://api.anthropic.com/v1}} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Key: Your Anthropic API key\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACJ}
+{\bkmkend AAAAAAAACJ}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Ollama (Local)
+\par}
+{\tc\tcl4 \v Ollama (Local)}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Model: {\f2 llama2}  or any model you have installed\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Base: {\f2 {\f2 http://localhost:11434}} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Key: (leave blank)\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACK}
+{\bkmkend AAAAAAAACK}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Azure OpenAI
+\par}
+{\tc\tcl4 \v Azure OpenAI}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Model: Your deployed model name\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Base: Your Azure endpoint\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Key: Your Azure API key\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAACL}
+{\bkmkend AAAAAAAACL}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Configuration File Structure
+\par}
+{\tc\tcl3 \v Configuration File Structure}
+After configuration, your {\f2 ~/.penify/config.json}  will contain:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid \{\par
+  "llm": \{\par
+    "model": "gpt-3.5-turbo",\par
+    "api_base": "https://api.openai.com/v1",\par
+    "api_key": "sk-..."\par
+  \}\par
+\}\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAACM}
+{\bkmkend AAAAAAAACM}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+JIRA Configuration
+\par}
+{\tc\tcl2 \v JIRA Configuration}
+{\bkmkstart AAAAAAAACN}
+{\bkmkend AAAAAAAACN}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Web Interface
+\par}
+{\tc\tcl3 \v Web Interface}
+Running {\f2 penify config jira}  opens a web interface where you can configure:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab {\b JIRA URL} : Your JIRA instance URL (e.g., {\f2 {\f2 https://yourcompany.atlassian.net}} )\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab {\b Username} : Your JIRA username (typically your email)\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab {\b API Token} : Your JIRA API token\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACO}
+{\bkmkend AAAAAAAACO}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Creating a JIRA API Token
+\par}
+{\tc\tcl3 \v Creating a JIRA API Token}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Log in to {\f2 https://id.atlassian.com/manage-profile/security/api-tokens}\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Click "Create API token"\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Give it a name (e.g., "Penify CLI")\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+4.\tab Copy the generated token and paste it into the configuration\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACP}
+{\bkmkend AAAAAAAACP}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Configuration File Structure
+\par}
+{\tc\tcl3 \v Configuration File Structure}
+After configuration, your {\f2 ~/.penify/config.json}  will contain:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid \{\par
+  "jira": \{\par
+    "url": "https://yourcompany.atlassian.net",\par
+    "username": "your.email@example.com",\par
+    "api_token": "your-jira-api-token"\par
+  \}\par
+\}\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAACQ}
+{\bkmkend AAAAAAAACQ}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Configuration Locations
+\par}
+{\tc\tcl2 \v Configuration Locations}
+Penify CLI looks for configuration in multiple locations:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Project-specific: {\f2 .penify/config.json}  in the Git repository root\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab User-specific: {\f2 ~/.penify/config.json}  in your home directory\par}
+\par
+The project-specific configuration takes precedence if both exist.\par}
+{\bkmkstart AAAAAAAACR}
+{\bkmkend AAAAAAAACR}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Environment Variables
+\par}
+{\tc\tcl2 \v Environment Variables}
+You can override configuration settings using environment variables:\par
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_API_TOKEN} : Override the stored API token\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_LLM_MODEL} : Override the configured LLM model\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_LLM_API_BASE} : Override the configured LLM API base URL\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_LLM_API_KEY} : Override the configured LLM API key\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_JIRA_URL} : Override the configured JIRA URL\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_JIRA_USER} : Override the configured JIRA username\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 PENIFY_JIRA_TOKEN} : Override the configured JIRA API token\par}
+\par
+Example: {
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid export PENIFY_LLM_MODEL="gpt-4"\par
+penify commit\par
+}
+\par}
+{\bkmkstart AAAAAAAACS}
+{\bkmkend AAAAAAAACS}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Command-Line Configuration
+\par}
+{\tc\tcl2 \v Command-Line Configuration}
+For advanced users or scripting, you can directly edit the configuration file:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # View current configuration\par
+cat ~/.penify/config.json\par
+\par
+# Edit configuration with your preferred editor\par
+nano ~/.penify/config.json\par
+}
+\par}
+{\bkmkstart AAAAAAAACT}
+{\bkmkend AAAAAAAACT}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Sharing Configuration
+\par}
+{\tc\tcl2 \v Sharing Configuration}
+You can share configuration between machines by copying the {\f2 .penify/config.json}  file. However, be cautious with API keys and credentials.\par
+For team settings, consider:{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Using a project-specific {\f2 .penify/config.json}  with shared settings\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Excluding API keys from shared configuration\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Using environment variables for sensitive credentials\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACU}
+{\bkmkend AAAAAAAACU}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Troubleshooting
+\par}
+{\tc\tcl2 \v Troubleshooting}
+{\bkmkstart AAAAAAAACV}
+{\bkmkend AAAAAAAACV}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Common Issues
+\par}
+{\tc\tcl3 \v Common Issues}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab **"Error reading configuration file"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check if the file exists: {\f2 ls -la ~/.penify} \par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure it contains valid JSON: {\f2 cat ~/.penify/config.json} \par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab **"Failed to connect to LLM API"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Verify API base URL and API key\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check network connectivity to the API endpoint\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure your account has access to the specified model\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab **"Failed to connect to JIRA"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check JIRA URL format (should include {\f2 {\f2 https://}} )\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Verify username and API token\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure your JIRA account has API access permissions \par}
+}
+\par
+\par}
+\par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Penify CLI - Detailed Usage Guide{\tc \v Penify CLI - Detailed Usage Guide}\par \pard\plain 
+{\bkmkstart AAAAAAAAPD}
+{\bkmkend AAAAAAAAPD}
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+This document provides in-depth information about all features and capabilities of the Penify CLI tool.\par
+{\bkmkstart AAAAAAAACW}
+{\bkmkend AAAAAAAACW}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Table of Contents
+\par}
+{\tc\tcl2 \v Table of Contents}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Penify CLI - Detailed Usage Guide{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Table of Contents\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Authentication{
+\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Login Process\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+API Token Storage\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Token Precedence\par}
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Command Overview\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Commit Message Generation\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Code Documentation Generation{
+\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Use Cases\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Authentication Requirement\par}
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Configuration Settings\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Git Hooks{
+\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Post-Commit Hook\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Custom Hook Location\par}
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Advanced Use Cases{
+\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+CI/CD Integration\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Remote Repository Documentation\par}
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Troubleshooting{
+\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Common Issues\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Logs\par
+\pard\plain \s122\fi-360\li1080\widctlpar\jclisttab\tx1080{\*\pn \pnlvlbody\ilvl0\ls3\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Support\par}
+}
+}
+\par
+\par}
+{\bkmkstart AAAAAAAACX}
+{\bkmkend AAAAAAAACX}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Authentication
+\par}
+{\tc\tcl2 \v Authentication}
+{\bkmkstart AAAAAAAACY}
+{\bkmkend AAAAAAAACY}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Login Process
+\par}
+{\tc\tcl3 \v Login Process}
+When you run {\f2 penify login} , the tool:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Opens your default web browser\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Redirects you to Penify's login page\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Captures the authentication token after successful login\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+4.\tab Saves the token in {\f2 ~/.penify}  file\par}
+\par
+\par}
+{\bkmkstart AAAAAAAACZ}
+{\bkmkend AAAAAAAACZ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+API Token Storage
+\par}
+{\tc\tcl3 \v API Token Storage}
+API tokens are stored in your home directory in the {\f2 .penify}  file. This JSON file contains:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid \{\par
+  "api_keys": "your-api-token",\par
+  "llm": \{ "model": "...", "api_base": "...", "api_key": "..." \},\par
+  "jira": \{ "url": "...", "username": "...", "api_token": "..." \}\par
+\}\par
+}
+\par}
+{\bkmkstart AAAAAAAADA}
+{\bkmkend AAAAAAAADA}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Token Precedence
+\par}
+{\tc\tcl3 \v Token Precedence}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Environment variable {\f2 PENIFY_API_TOKEN}  (highest priority)\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Token in {\f2 ~/.penify}  file\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAADB}
+{\bkmkend AAAAAAAADB}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Command Overview
+\par}
+{\tc\tcl2 \v Command Overview}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify\par
+\'E2\'94\'9C\'E2\'94\'80\'E2\'94\'80 commit        Generate smart commit messages\par
+\'E2\'94\'9C\'E2\'94\'80\'E2\'94\'80 config        Configure local LLM and JIRA\par
+\'E2\'94\'82   \'E2\'94\'9C\'E2\'94\'80\'E2\'94\'80 llm       Configure local LLM settings\par
+\'E2\'94\'82   \'E2\'94\'94\'E2\'94\'80\'E2\'94\'80 jira      Configure JIRA integration\par
+\'E2\'94\'9C\'E2\'94\'80\'E2\'94\'80 login         Log in to Penify account\par
+\'E2\'94\'94\'E2\'94\'80\'E2\'94\'80 docgen        Generate code documentation\par
+    \'E2\'94\'9C\'E2\'94\'80\'E2\'94\'80 install-hook     Install Git post-commit hook\par
+    \'E2\'94\'94\'E2\'94\'80\'E2\'94\'80 uninstall-hook   Remove Git post-commit hook\par
+}
+\par}
+{\bkmkstart AAAAAAAADC}
+{\bkmkend AAAAAAAADC}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Commit Message Generation
+\par}
+{\tc\tcl2 \v Commit Message Generation}
+The {\f2 commit}  command analyzes your staged changes and generates meaningful commit messages. It can:\par
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Use a local LLM if configured\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Enhance messages with JIRA issue details\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Provide both title and description\par}
+\par
+For specific options and examples, see {\b docs/commit-commands.md}.\par}
+{\bkmkstart AAAAAAAADD}
+{\bkmkend AAAAAAAADD}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Code Documentation Generation
+\par}
+{\tc\tcl2 \v Code Documentation Generation}
+The {\f2 docgen}  command generates documentation for your code:\par
+{\bkmkstart AAAAAAAADE}
+{\bkmkend AAAAAAAADE}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Use Cases
+\par}
+{\tc\tcl3 \v Use Cases}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab {\b Current Git Diff} : Default behavior, documents only changed files\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab {\b Specific File} : Pass a file path with {\f2 -l path/to/file.py} \par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab {\b Entire Folder} : Pass a folder path with {\f2 -l path/to/folder} \par}
+\par
+\par}
+{\bkmkstart AAAAAAAADF}
+{\bkmkend AAAAAAAADF}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Authentication Requirement
+\par}
+{\tc\tcl3 \v Authentication Requirement}
+This feature requires authentication with a Penify account. Run {\f2 penify login}  before using documentation features.\par}
+\par}
+{\bkmkstart AAAAAAAADG}
+{\bkmkend AAAAAAAADG}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Configuration Settings
+\par}
+{\tc\tcl2 \v Configuration Settings}
+Configure local settings using the {\f2 config}  command:\par
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b LLM Settings} : Configure a local LLM for commit message generation\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b JIRA Settings} : Set up JIRA integration for enhanced commit messages\par}
+\par
+For detailed configuration options, see {\b docs/config-commands.md}.\par}
+{\bkmkstart AAAAAAAADH}
+{\bkmkend AAAAAAAADH}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Git Hooks
+\par}
+{\tc\tcl2 \v Git Hooks}
+Penify can install Git hooks to automate documentation generation:\par
+{\bkmkstart AAAAAAAADI}
+{\bkmkend AAAAAAAADI}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Post-Commit Hook
+\par}
+{\tc\tcl3 \v Post-Commit Hook}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b Install} : {\f2 penify docgen install-hook} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b What it does} : Automatically generates documentation for changed files after each commit\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b Uninstall} : {\f2 penify docgen uninstall-hook} \par}
+\par
+\par}
+{\bkmkstart AAAAAAAADJ}
+{\bkmkend AAAAAAAADJ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Custom Hook Location
+\par}
+{\tc\tcl3 \v Custom Hook Location}
+You can specify a custom location for Git hooks:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen install-hook -l /path/to/git/repo\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAADK}
+{\bkmkend AAAAAAAADK}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Advanced Use Cases
+\par}
+{\tc\tcl2 \v Advanced Use Cases}
+{\bkmkstart AAAAAAAADL}
+{\bkmkend AAAAAAAADL}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+CI/CD Integration
+\par}
+{\tc\tcl3 \v CI/CD Integration}
+For CI/CD pipelines:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Set {\f2 PENIFY_API_TOKEN}  as an environment variable\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Run commands without requiring interactive login\par}
+\par
+\par}
+{\bkmkstart AAAAAAAADM}
+{\bkmkend AAAAAAAADM}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Remote Repository Documentation
+\par}
+{\tc\tcl3 \v Remote Repository Documentation}
+Generate documentation for an entire repository:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid git clone https://github.com/user/repo\par
+cd repo\par
+penify docgen -l .\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAADN}
+{\bkmkend AAAAAAAADN}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Troubleshooting
+\par}
+{\tc\tcl2 \v Troubleshooting}
+{\bkmkstart AAAAAAAADO}
+{\bkmkend AAAAAAAADO}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Common Issues
+\par}
+{\tc\tcl3 \v Common Issues}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab {\b API Key Errors} : Ensure you've run {\f2 penify login}  or set {\f2 PENIFY_API_TOKEN} \par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab {\b LLM Configuration} : Check your LLM settings with {\f2 cat ~/.penify} \par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab {\b JIRA Integration} : Verify JIRA credentials in your configuration\par}
+\par
+\par}
+{\bkmkstart AAAAAAAADP}
+{\bkmkend AAAAAAAADP}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Logs
+\par}
+{\tc\tcl3 \v Logs}
+For more detailed logs, you can set the environment variable:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid export PENIFY_DEBUG=1\par
+}
+\par}
+{\bkmkstart AAAAAAAADQ}
+{\bkmkend AAAAAAAADQ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Support
+\par}
+{\tc\tcl3 \v Support}
+For additional help, visit {\f2 https://docs.penify.dev/} or contact {\f2 support@penify.dev} \par}
+\par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Penify CLI - Documentation Generation Commands{\tc \v Penify CLI - Documentation Generation Commands}\par \pard\plain 
+{\bkmkstart AAAAAAAAPE}
+{\bkmkend AAAAAAAAPE}
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+This document provides a detailed guide to all permutations and combinations of the {\f2 docgen}  command, including extensive information about Git hook commands for automating documentation generation.\par
+{\bkmkstart AAAAAAAADR}
+{\bkmkend AAAAAAAADR}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Table of Contents
+\par}
+{\tc\tcl2 \v Table of Contents}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Basic Usage\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Command Options\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Option Combinations\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Git Hook Commands{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Hook Installation\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Hook Customization\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Hook Uninstallation\par}
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Advanced Use Cases\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Troubleshooting\par}
+\par
+\par}
+{\bkmkstart AAAAAAAADS}
+{\bkmkend AAAAAAAADS}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Basic Usage
+\par}
+{\tc\tcl2 \v Basic Usage}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen\par
+}
+\par
+By default, this command:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Analyzes the current Git diff (changes since last commit)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Generates documentation for changed files only\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Requires authentication via {\f2 penify login} \par}
+\par
+\par}
+{\bkmkstart AAAAAAAADT}
+{\bkmkend AAAAAAAADT}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Command Options
+\par}
+{\tc\tcl2 \v Command Options}
+{\bkmkstart AAAAAAAADU}
+{\bkmkend AAAAAAAADU}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+<tt>-l, --location</tt>
+\par}
+{\tc\tcl3 \v <tt>-l, --location</tt>}
+Specify a target for documentation generation:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Generate documentation for a specific file\par
+penify docgen -l path/to/file.py\par
+\par
+# Generate documentation for a specific folder\par
+penify docgen -l path/to/folder\par
+}
+\par
+Without this flag, Penify analyzes only Git-tracked modified files.\par}
+{\bkmkstart AAAAAAAADV}
+{\bkmkend AAAAAAAADV}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Subcommands
+\par}
+{\tc\tcl3 \v Subcommands}
+{\bkmkstart AAAAAAAADW}
+{\bkmkend AAAAAAAADW}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+<tt>install-hook</tt>
+\par}
+{\tc\tcl4 \v <tt>install-hook</tt>}
+Install a Git post-commit hook to automatically generate documentation:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen install-hook\par
+}
+\par}
+{\bkmkstart AAAAAAAADX}
+{\bkmkend AAAAAAAADX}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+<tt>uninstall-hook</tt>
+\par}
+{\tc\tcl4 \v <tt>uninstall-hook</tt>}
+Remove the Git post-commit hook:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen uninstall-hook\par
+}
+\par}
+\par}
+\par}
+{\bkmkstart AAAAAAAADY}
+{\bkmkend AAAAAAAADY}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Option Combinations
+\par}
+{\tc\tcl2 \v Option Combinations}
+{\bkmkstart AAAAAAAADZ}
+{\bkmkend AAAAAAAADZ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate Documentation for Current Git Diff
+\par}
+{\tc\tcl3 \v Generate Documentation for Current Git Diff}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Basic usage - current Git diff\par
+penify docgen\par
+}
+\par}
+{\bkmkstart AAAAAAAAEA}
+{\bkmkend AAAAAAAAEA}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate Documentation for a Specific File
+\par}
+{\tc\tcl3 \v Generate Documentation for a Specific File}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Single file documentation\par
+penify docgen -l src/main.py\par
+}
+\par}
+{\bkmkstart AAAAAAAAEB}
+{\bkmkend AAAAAAAAEB}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Generate Documentation for a Folder
+\par}
+{\tc\tcl3 \v Generate Documentation for a Folder}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Folder documentation\par
+penify docgen -l src/models/\par
+}
+\par}
+{\bkmkstart AAAAAAAAEC}
+{\bkmkend AAAAAAAAEC}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Install Hook in Current Repository
+\par}
+{\tc\tcl3 \v Install Hook in Current Repository}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Install hook in current Git repository\par
+penify docgen install-hook\par
+}
+\par}
+{\bkmkstart AAAAAAAAED}
+{\bkmkend AAAAAAAAED}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Install Hook in Specific Repository
+\par}
+{\tc\tcl3 \v Install Hook in Specific Repository}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Install hook in a specific Git repository\par
+penify docgen install-hook -l /path/to/repo\par
+}
+\par}
+{\bkmkstart AAAAAAAAEE}
+{\bkmkend AAAAAAAAEE}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Uninstall Hook from Current Repository
+\par}
+{\tc\tcl3 \v Uninstall Hook from Current Repository}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Uninstall hook from current Git repository\par
+penify docgen uninstall-hook\par
+}
+\par}
+{\bkmkstart AAAAAAAAEF}
+{\bkmkend AAAAAAAAEF}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Uninstall Hook from Specific Repository
+\par}
+{\tc\tcl3 \v Uninstall Hook from Specific Repository}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Uninstall hook from a specific Git repository\par
+penify docgen uninstall-hook -l /path/to/repo\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAEG}
+{\bkmkend AAAAAAAAEG}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Git Hook Commands
+\par}
+{\tc\tcl2 \v Git Hook Commands}
+Penify provides Git hook commands to automate documentation generation as part of your Git workflow.\par
+{\bkmkstart AAAAAAAAEH}
+{\bkmkend AAAAAAAAEH}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Hook Installation
+\par}
+{\tc\tcl3 \v Hook Installation}
+{\bkmkstart AAAAAAAAEI}
+{\bkmkend AAAAAAAAEI}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+How Hooks Work
+\par}
+{\tc\tcl4 \v How Hooks Work}
+When you install a Git hook with {\f2 penify docgen install-hook} , Penify:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Creates a post-commit hook script in the {\f2 .git/hooks}  directory\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Makes the script executable\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Configures the hook to run {\f2 penify docgen}  after each commit\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAEJ}
+{\bkmkend AAAAAAAAEJ}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Hook Script Content
+\par}
+{\tc\tcl4 \v Hook Script Content}
+The generated post-commit hook contains:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid #!/bin/sh\par
+# This is a post-commit hook generated by penify.\par
+# Automatically generates documentation for changed files after each commit.\par
+\par
+penify docgen -gf /path/to/git/repository -t your_api_token\par
+}
+\par}
+{\bkmkstart AAAAAAAAEK}
+{\bkmkend AAAAAAAAEK}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Installation Location
+\par}
+{\tc\tcl4 \v Installation Location}
+By default, hooks are installed in the current Git repository. You can specify a different location:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen install-hook -l /path/to/repo\par
+}
+\par}
+{\bkmkstart AAAAAAAAEL}
+{\bkmkend AAAAAAAAEL}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Installation Requirements
+\par}
+{\tc\tcl4 \v Installation Requirements}
+To install hooks, you need:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+A valid Penify API token (login first with {\f2 penify login} )\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Write permissions to the {\f2 .git/hooks}  directory\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAEM}
+{\bkmkend AAAAAAAAEM}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Verifying Installation
+\par}
+{\tc\tcl4 \v Verifying Installation}
+After installation, you can verify that the hook is installed:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid cat .git/hooks/post-commit\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAEN}
+{\bkmkend AAAAAAAAEN}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Hook Customization
+\par}
+{\tc\tcl3 \v Hook Customization}
+You can customize the post-commit hook after installation:\par
+{\bkmkstart AAAAAAAAEO}
+{\bkmkend AAAAAAAAEO}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Modifying Hook Behavior
+\par}
+{\tc\tcl4 \v Modifying Hook Behavior}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Edit the {\f2 .git/hooks/post-commit}  file\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Add additional options to the {\f2 penify docgen}  command\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Add other commands to run after commit\par}
+\par
+Example of a customized hook:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid #!/bin/sh\par
+# This is a post-commit hook generated by penify.\par
+# Automatically generates documentation for changed files after each commit.\par
+\par
+# Generate documentation\par
+penify docgen -gf /path/to/git/repository -t your_api_token\par
+\par
+# Additional custom commands\par
+echo "Documentation generation complete!"\par
+}
+\par}
+{\bkmkstart AAAAAAAAEP}
+{\bkmkend AAAAAAAAEP}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Advanced Hook Scenarios
+\par}
+{\tc\tcl4 \v Advanced Hook Scenarios}
+{\b Conditional Documentation Generation} :\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid #!/bin/sh\par
+# Only generate documentation for commits to the main branch\par
+BRANCH=$(git rev-parse --abbrev-ref HEAD)\par
+if [ "$BRANCH" = "main" ]; then\par
+  penify docgen -gf /path/to/git/repository -t your_api_token\par
+fi\par
+}
+\par
+{\b Documenting Specific Files/Folders} :\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid #!/bin/sh\par
+# Only document Python files in the src directory\par
+penify docgen -l src/ -gf /path/to/git/repository -t your_api_token\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAEQ}
+{\bkmkend AAAAAAAAEQ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Hook Uninstallation
+\par}
+{\tc\tcl3 \v Hook Uninstallation}
+{\bkmkstart AAAAAAAAER}
+{\bkmkend AAAAAAAAER}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Standard Uninstallation
+\par}
+{\tc\tcl4 \v Standard Uninstallation}
+To remove a hook from the current repository:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen uninstall-hook\par
+}
+\par}
+{\bkmkstart AAAAAAAAES}
+{\bkmkend AAAAAAAAES}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Specific Repository Uninstallation
+\par}
+{\tc\tcl4 \v Specific Repository Uninstallation}
+To remove a hook from a specific repository:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen uninstall-hook -l /path/to/repo\par
+}
+\par}
+{\bkmkstart AAAAAAAAET}
+{\bkmkend AAAAAAAAET}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Manual Hook Removal
+\par}
+{\tc\tcl4 \v Manual Hook Removal}
+If needed, you can manually remove the hook:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid rm .git/hooks/post-commit\par
+}
+\par}
+{\bkmkstart AAAAAAAAEU}
+{\bkmkend AAAAAAAAEU}
+{{\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid 
+Verifying Uninstallation
+\par}
+{\tc\tcl4 \v Verifying Uninstallation}
+Check that the hook was successfully removed:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid ls -la .git/hooks/post-commit  # Should return "No such file or directory"\par
+}
+\par}
+\par}
+\par}
+{\bkmkstart AAAAAAAAEV}
+{\bkmkend AAAAAAAAEV}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Advanced Use Cases
+\par}
+{\tc\tcl2 \v Advanced Use Cases}
+{\bkmkstart AAAAAAAAEW}
+{\bkmkend AAAAAAAAEW}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Continuous Integration
+\par}
+{\tc\tcl3 \v Continuous Integration}
+Run documentation generation in CI pipelines:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # In your CI script\par
+export PENIFY_API_TOKEN=your_api_token\par
+penify docgen -l src/\par
+}
+\par}
+{\bkmkstart AAAAAAAAEX}
+{\bkmkend AAAAAAAAEX}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Batch Documentation
+\par}
+{\tc\tcl3 \v Batch Documentation}
+Generate documentation for multiple repositories:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Bash script for batch documentation\par
+for repo in repo1 repo2 repo3; do\par
+  cd /path/to/$repo\par
+  penify docgen -l .\par
+done\par
+}
+\par}
+{\bkmkstart AAAAAAAAEY}
+{\bkmkend AAAAAAAAEY}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Custom Git Hook Integration
+\par}
+{\tc\tcl3 \v Custom Git Hook Integration}
+Integrate with other Git hooks:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # In .git/hooks/pre-push\par
+penify docgen -l src/\par
+}
+\par}
+{\bkmkstart AAAAAAAAEZ}
+{\bkmkend AAAAAAAAEZ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Documenting Release Tags
+\par}
+{\tc\tcl3 \v Documenting Release Tags}
+Generate documentation when creating a release tag:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Document everything when creating a tag\par
+git tag -a v1.0.0\par
+penify docgen -l .  # Document entire codebase\par
+git commit --amend -m "Release v1.0.0 with updated documentation"\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAFA}
+{\bkmkend AAAAAAAAFA}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Troubleshooting
+\par}
+{\tc\tcl2 \v Troubleshooting}
+{\bkmkstart AAAAAAAAFB}
+{\bkmkend AAAAAAAAFB}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Common Issues
+\par}
+{\tc\tcl3 \v Common Issues}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab **"Authentication required"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Run {\f2 penify login}  before using documentation features\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check your API token with {\f2 cat ~/.penify} \par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab **"Permission denied when installing hook"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check Git repository permissions\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Try running with sudo (if appropriate for your environment)\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure the {\f2 .git/hooks}  directory exists\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab **"Hook installed but not running"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check if the hook is executable: {\f2 ls -la .git/hooks/post-commit} \par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Make it executable if needed: {\f2 chmod +x .git/hooks/post-commit} \par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check for syntax errors in the hook script\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+4.\tab **"File or directory not found"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Verify the path provided to the {\f2 -l}  option\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Ensure you're running the command from the correct directory\par}
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+5.\tab **"Hook uninstallation failed"**{
+\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Check permissions on the {\f2 .git/hooks}  directory\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Try manual removal: {\f2 rm .git/hooks/post-commit} \par}
+}
+\par
+\par}
+{\bkmkstart AAAAAAAAFC}
+{\bkmkend AAAAAAAAFC}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Debugging
+\par}
+{\tc\tcl3 \v Debugging}
+For detailed output when running documentation commands:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid export PENIFY_DEBUG=1\par
+penify docgen -l src/\par
+}
+\par}
+{\bkmkstart AAAAAAAAFD}
+{\bkmkend AAAAAAAAFD}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Getting Help
+\par}
+{\tc\tcl3 \v Getting Help}
+For command-specific help:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen --help\par
+penify docgen install-hook --help\par
+penify docgen uninstall-hook --help\par
+}
+ \par}
+\par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Penify CLI Example Workflows{\tc \v Penify CLI Example Workflows}\par \pard\plain 
+{\bkmkstart AAAAAAAAPF}
+{\bkmkend AAAAAAAAPF}
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+This document demonstrates how to use Penify CLI in real-world development workflows to improve your productivity.\par
+{\bkmkstart AAAAAAAAFE}
+{\bkmkend AAAAAAAAFE}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Workflow 1: Efficient Git Commits with AI
+\par}
+{\tc\tcl2 \v Workflow 1: Efficient Git Commits with AI}
+{\bkmkstart AAAAAAAAFF}
+{\bkmkend AAAAAAAAFF}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Setup
+\par}
+{\tc\tcl3 \v Setup}
+First, configure your local LLM for offline operation:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify config llm\par
+}
+\par
+Configure your JIRA integration for enhanced commit messages:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify config jira\par
+}
+\par}
+{\bkmkstart AAAAAAAAFG}
+{\bkmkend AAAAAAAAFG}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Daily Workflow
+\par}
+{\tc\tcl3 \v Daily Workflow}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Make your code changes as usual\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab When ready to commit, use Penify to generate a smart commit message:\par}
+\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit\par
+}
+\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Review and confirm the generated commit message\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Git commit and push as usual\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAFH}
+{\bkmkend AAAAAAAAFH}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Benefits
+\par}
+{\tc\tcl3 \v Benefits}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Consistent and descriptive commit messages\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Automatic inclusion of relevant JIRA ticket information\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Time saved from writing detailed commit messages\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAAFI}
+{\bkmkend AAAAAAAAFI}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Workflow 2: Documentation Generation Pipeline
+\par}
+{\tc\tcl2 \v Workflow 2: Documentation Generation Pipeline}
+{\bkmkstart AAAAAAAAFJ}
+{\bkmkend AAAAAAAAFJ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Setup
+\par}
+{\tc\tcl3 \v Setup}
+Login to Penify to access advanced documentation features:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify login\par
+}
+\par
+Install the Git hook for automatic documentation generation:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen install-hook\par
+}
+\par}
+{\bkmkstart AAAAAAAAFK}
+{\bkmkend AAAAAAAAFK}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Daily Workflow
+\par}
+{\tc\tcl3 \v Daily Workflow}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Make your code changes as usual\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Commit your changes\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+3.\tab Documentation is automatically generated for changed files\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+4.\tab Review the generated documentation\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAFL}
+{\bkmkend AAAAAAAAFL}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Manual Documentation
+\par}
+{\tc\tcl3 \v Manual Documentation}
+For specific files or folders:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen -l src/components/authentication\par
+}
+\par}
+{\bkmkstart AAAAAAAAFM}
+{\bkmkend AAAAAAAAFM}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Benefits
+\par}
+{\tc\tcl3 \v Benefits}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Always up-to-date documentation\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Consistent documentation style\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Time saved from writing detailed documentation\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAAFN}
+{\bkmkend AAAAAAAAFN}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Workflow 3: Code Review Enhancement
+\par}
+{\tc\tcl2 \v Workflow 3: Code Review Enhancement}
+{\bkmkstart AAAAAAAAFO}
+{\bkmkend AAAAAAAAFO}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Setup
+\par}
+{\tc\tcl3 \v Setup}
+Ensure you're logged into Penify:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify login\par
+}
+\par}
+{\bkmkstart AAAAAAAAFP}
+{\bkmkend AAAAAAAAFP}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Workflow
+\par}
+{\tc\tcl3 \v Workflow}
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Before submitting a PR, generate documentation for changed files:\par}
+\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen\par
+}
+\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Include the generated documentation in your PR\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Reviewers can better understand your changes with the AI-generated explanations\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAFQ}
+{\bkmkend AAAAAAAAFQ}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Benefits
+\par}
+{\tc\tcl3 \v Benefits}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Improved PR quality\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Faster code reviews\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Better team understanding of code changes\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAAFR}
+{\bkmkend AAAAAAAAFR}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Workflow 4: Onboarding New Team Members
+\par}
+{\tc\tcl2 \v Workflow 4: Onboarding New Team Members}
+{\bkmkstart AAAAAAAAFS}
+{\bkmkend AAAAAAAAFS}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+For Team Leads
+\par}
+{\tc\tcl3 \v For Team Leads}
+Generate comprehensive documentation for the entire codebase:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen -l .\par
+}
+\par}
+{\bkmkstart AAAAAAAAFT}
+{\bkmkend AAAAAAAAFT}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+For New Team Members
+\par}
+{\tc\tcl3 \v For New Team Members}
+Generate focused documentation for components you're working on:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify docgen -l src/components/my-feature\par
+}
+\par}
+{\bkmkstart AAAAAAAAFU}
+{\bkmkend AAAAAAAAFU}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Benefits
+\par}
+{\tc\tcl3 \v Benefits}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Faster onboarding\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Better understanding of code structure\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Reduced questions to senior team members\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAAFV}
+{\bkmkend AAAAAAAAFV}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Workflow 5: Legacy Code Understanding
+\par}
+{\tc\tcl2 \v Workflow 5: Legacy Code Understanding}
+When working with unfamiliar legacy code:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Document a specific complex file\par
+penify docgen -l src/legacy/complex_module.py\par
+\par
+# Document an entire legacy component\par
+penify docgen -l src/legacy/old_component\par
+}
+\par
+{\bkmkstart AAAAAAAAFW}
+{\bkmkend AAAAAAAAFW}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Benefits
+\par}
+{\tc\tcl3 \v Benefits}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Quickly understand complex legacy systems\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Reduce time spent deciphering undocumented code\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Make safer changes to legacy systems \par}
+\par
+\par}
+\par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Penify CLI Tool{\tc \v Penify CLI Tool}\par \pard\plain 
+{\bkmkstart AAAAAAAAPG}
+{\bkmkend AAAAAAAAPG}
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+ \par
+A CLI tool to generate smart commit messages, code documentation, and more.\par
+{\bkmkstart AAAAAAAAFX}
+{\bkmkend AAAAAAAAFX}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Features
+\par}
+{\tc\tcl2 \v Features}
+{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Automatically generate documentation for your code\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Support for multiple programming languages\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Git hook integration for automatic documentation on commits\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Folder and file analysis\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAFY}
+{\bkmkend AAAAAAAAFY}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Installation
+\par}
+{\tc\tcl2 \v Installation}
+Install from PyPI:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid pip install penify\par
+}
+\par}
+{\bkmkstart AAAAAAAAFZ}
+{\bkmkend AAAAAAAAFZ}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Usage
+\par}
+{\tc\tcl2 \v Usage}
+Penify CLI provides several subcommands for different functionalities, organized into basic commands (no login required) and advanced commands (login required).\par}
+{\bkmkstart AAAAAAAAGA}
+{\bkmkend AAAAAAAAGA}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Basic Commands (No login required)
+\par}
+{\tc\tcl2 \v Basic Commands (No login required)}
+{\bkmkstart AAAAAAAAGB}
+{\bkmkend AAAAAAAAGB}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Commit
+\par}
+{\tc\tcl3 \v Commit}
+Generate smart commit messages using local LLM:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify commit [-m "Optional message"] [-e] [-d]\par
+}
+\par
+Options:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 -m, --message} : Optional custom commit message\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 -e, --terminal} : Open editor to modify commit message before committing\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 -d, --description} : Generate commit message with both title and description (without this flag, only title is generated)\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAGC}
+{\bkmkend AAAAAAAAGC}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Config
+\par}
+{\tc\tcl3 \v Config}
+Configure local LLM and JIRA settings:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Configure LLM settings\par
+penify config llm --model MODEL_NAME [--api-base API_URL] [--api-key API_KEY]\par
+\par
+# Configure LLM settings through web interface\par
+penify config llm-web\par
+\par
+# Configure JIRA settings\par
+penify config jira --url JIRA_URL --username USERNAME --api-token TOKEN [--verify]\par
+\par
+# Configure JIRA settings through web interface\par
+penify config jira-web\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAGD}
+{\bkmkend AAAAAAAAGD}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Advanced Commands (Login required)
+\par}
+{\tc\tcl2 \v Advanced Commands (Login required)}
+{\bkmkstart AAAAAAAAGE}
+{\bkmkend AAAAAAAAGE}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Login
+\par}
+{\tc\tcl3 \v Login}
+To log in and obtain an API token:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify login\par
+}
+\par
+This command will open a browser window for authentication. After successful login, the API key will be saved locally for future use.\par}
+{\bkmkstart AAAAAAAAGF}
+{\bkmkend AAAAAAAAGF}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Documentation Generation
+\par}
+{\tc\tcl3 \v Documentation Generation}
+Generate documentation for Git diff, files or folders:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Generate documentation for latest Git commit diff\par
+penify docgen\par
+\par
+# Generate documentation for specific file or folder\par
+penify docgen -l /path/to/file/or/folder\par
+}
+\par
+Options:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 -l, --location} : Path to specific file or folder for documentation generation (defaults to current directory)\par}
+\par
+\par}
+{\bkmkstart AAAAAAAAGG}
+{\bkmkend AAAAAAAAGG}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Git Hook Management
+\par}
+{\tc\tcl3 \v Git Hook Management}
+Install or uninstall Git post-commit hooks:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid # Install Git hook\par
+penify docgen install-hook [-l /path/to/repo]\par
+\par
+# Uninstall Git hook\par
+penify docgen uninstall-hook [-l /path/to/repo]\par
+}
+\par
+Options:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\f2 -l, --location} : Path to the Git repository (defaults to current directory)\par}
+\par
+\par}
+\par}
+{\bkmkstart AAAAAAAAGH}
+{\bkmkend AAAAAAAAGH}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Authentication
+\par}
+{\tc\tcl2 \v Authentication}
+Penify CLI uses an API token for authentication with advanced features.\par
+If no token is available and you try to access an advanced feature, you'll be prompted to log in.\par}
+{\bkmkstart AAAAAAAAGI}
+{\bkmkend AAAAAAAAGI}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Local LLM Configuration
+\par}
+{\tc\tcl2 \v Local LLM Configuration}
+For commit message generation, Penify can use a local LLM. Configure it using:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify config llm --model MODEL_NAME --api-base API_URL --api-key API_KEY\par
+}
+\par
+Common configurations:{
+\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+OpenAI: {\f2 --model gpt-3.5-turbo --api-base {\f2 https://api.openai.com/v1} --api-key YOUR_KEY} \par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Anthropic: {\f2 --model claude-2 --api-base {\f2 https://api.anthropic.com} --api-key YOUR_KEY} \par}
+\par
+\par}
+{\bkmkstart AAAAAAAAGJ}
+{\bkmkend AAAAAAAAGJ}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+JIRA Integration
+\par}
+{\tc\tcl2 \v JIRA Integration}
+Configure JIRA integration to enhance commit messages with issue details:\par
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid penify config jira --url https://your-domain.atlassian.net --username your-email@example.com --api-token YOUR_API_TOKEN\par
+}
+\par}
+{\bkmkstart AAAAAAAAGK}
+{\bkmkend AAAAAAAAGK}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Development
+\par}
+{\tc\tcl2 \v Development}
+To set up the development environment:\par
+{
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+1.\tab Clone the repository: {
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid git clone https://github.com/SingularityX-ai/penify-cli.git\par
+}
+\par
+\pard\plain \s140\fi-360\li360\widctlpar\fs20\cgrid 
+2.\tab Install the package in editable mode: {
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid pip install -e .\par
+}
+\par}
+\par
+{\bkmkstart AAAAAAAAGL}
+{\bkmkend AAAAAAAAGL}
+{{\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Running Tests
+\par}
+{\tc\tcl3 \v Running Tests}
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid pytest\par
+}
+\par}
+\par}
+{\bkmkstart AAAAAAAAGM}
+{\bkmkend AAAAAAAAGM}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+License
+\par}
+{\tc\tcl2 \v License}
+This project is licensed under the MIT License.\par}
+{\bkmkstart AAAAAAAAGN}
+{\bkmkend AAAAAAAAGN}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Author
+\par}
+{\tc\tcl2 \v Author}
+Suman Saurabh ({\f2 ss.sumansaurabh92@gmail.com})\par}
+{\bkmkstart AAAAAAAAGO}
+{\bkmkend AAAAAAAAGO}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Contributing
+\par}
+{\tc\tcl2 \v Contributing}
+Contributions are welcome! Please feel free to submit a Pull Request.\par}
+{\bkmkstart AAAAAAAAGP}
+{\bkmkend AAAAAAAAGP}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Issues
+\par}
+{\tc\tcl2 \v Issues}
+If you encounter any problems or have suggestions, please file an issue on the {\f2 GitHub repository}.\par}
+{\bkmkstart AAAAAAAAGQ}
+{\bkmkend AAAAAAAAGQ}
+{{\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Support
+\par}
+{\tc\tcl2 \v Support}
+For automated API Documentation, Architecture Documentation, Code Documentation, Pull Request Documentation, or if you need a demo, please join our {\f2 Discord support channel}. \par}
+}}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Namespace Index\par \pard\plain 
+{\tc \v Namespace Index}
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Namespace List\par \pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid Here is a list of all namespaces with brief descriptions:}
+{
+\par
+\pard\plain \s101\li360\sa27\sb27\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+{\b {\b penify_hook} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.api_client} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.base_analyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHE \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands.auth_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands.commit_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHW \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands.config_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIA \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands.doc_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIN \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commands.hook_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commit_analyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIX \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.config_command} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJE \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.constants} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJH \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.file_analyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJK \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.folder_analyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJR \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.git_analyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJW \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.jira_client} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKD \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.llm_client} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKV \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.login_command} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAALC \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.main} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAALF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.ui_utils} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAALH \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.utils} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAMI \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b setup} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAMO \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANC \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.conftest} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAND \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_commit_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANE \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_config_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_doc_commands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAOG \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_web_config} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAOS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+\par}
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Hierarchical Index\par \pard\plain 
+{\tc \v Hierarchical Index}
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Class Hierarchy\par \pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid This inheritance list is sorted roughly, but not completely, alphabetically:}
+{
+\par
+\pard\plain \s101\li360\sa27\sb27\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+penify_hook.api_client.APIClient\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGU \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+penify_hook.base_analyzer.BaseAnalyzer\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHF \\*MERGEFORMAT}{\fldrslt pagenum}}
+{
+\par
+\pard\plain \s102\li720\sa24\sb24\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+penify_hook.commit_analyzer.CommitDocGenHook\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIY \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+penify_hook.file_analyzer.FileAnalyzerGenHook\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJM \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+penify_hook.folder_analyzer.FolderAnalyzerGenHook\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+penify_hook.git_analyzer.GitDocGenHook\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJY \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+}\par
+Exception\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGR \\*MERGEFORMAT}{\fldrslt pagenum}}
+{
+\par
+\pard\plain \s102\li720\sa24\sb24\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+penify_hook.utils.GitRepoNotFoundError\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAMN \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+}\par
+penify_hook.jira_client.JiraClient\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+penify_hook.llm_client.LLMClient\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKW \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+tests.test_commit_commands.TestCommitCommands\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+tests.test_config_commands.TestConfigCommands\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+tests.test_web_config.TestWebConfig\tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAOT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+}
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Class Index\par \pard\plain 
+{\tc \v Class Index}
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Class List\par \pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid Here are the classes, structs, unions and interfaces with brief descriptions:}
+{
+\par
+\pard\plain \s101\li360\sa27\sb27\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+{\b {\b penify_hook.api_client.APIClient} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGU \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.base_analyzer.BaseAnalyzer} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.commit_analyzer.CommitDocGenHook} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAIY \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b Exception} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAGR \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.file_analyzer.FileAnalyzerGenHook} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJM \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.folder_analyzer.FolderAnalyzerGenHook} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.git_analyzer.GitDocGenHook} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAJY \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.utils.GitRepoNotFoundError} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAMN \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.jira_client.JiraClient} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b penify_hook.llm_client.LLMClient} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAKW \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_commit_commands.TestCommitCommands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_config_commands.TestConfigCommands} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAANT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b {\b tests.test_web_config.TestWebConfig} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAOT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+\par}
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+File Index\par \pard\plain 
+{\tc \v File Index}
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+File List\par \pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid Here is a list of all files with brief descriptions:}
+{
+\par
+\pard\plain \s101\li360\sa27\sb27\widctlpar\tqr\tldot\tx8640\adjustright \fs20\cgrid 
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/{\b setup.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABD \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b __init__.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAI \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b api_client.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAG \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b base_analyzer.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAH \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b commit_analyzer.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAQ \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b config_command.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAR \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b constants.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAS \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b file_analyzer.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAT \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b folder_analyzer.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAU \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b git_analyzer.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAV \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b jira_client.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAW \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b llm_client.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAX \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b login_command.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAY \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b main.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAZ \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b ui_utils.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABA \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b utils.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABB \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b __init__.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAJ \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b auth_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAL \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b commit_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAM \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b config_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAN \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b doc_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAO \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/{\b hook_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAP \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b __init__.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAAAK \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b conftest.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABE \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_commit_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABF \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_config_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABG \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_doc_commands.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABH \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+{\b /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_web_config.py} } \tab {\field\fldedit {\*\fldinst PAGEREF AAAAAAAABI \\*MERGEFORMAT}{\fldrslt pagenum}}
+\par
+\par}
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Namespace Documentation\par \pard\plain 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook}
+{\xe \v penify_hook}
+{\bkmkstart AAAAAAAAGS}
+{\bkmkend AAAAAAAAGS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b api_client}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b base_analyzer}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b commit_analyzer}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b config_command}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b constants}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b file_analyzer}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b folder_analyzer}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b git_analyzer}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b jira_client}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b llm_client}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b login_command}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b main}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b ui_utils}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b utils}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.api_client Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.api_client}
+{\xe \v penify_hook.api_client}
+{\bkmkstart AAAAAAAAGT}
+{\bkmkend AAAAAAAAGT}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b APIClient}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.base_analyzer Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.base_analyzer}
+{\xe \v penify_hook.base_analyzer}
+{\bkmkstart AAAAAAAAHE}
+{\bkmkend AAAAAAAAHE}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b BaseAnalyzer}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands}
+{\xe \v penify_hook.commands}
+{\bkmkstart AAAAAAAAHS}
+{\bkmkend AAAAAAAAHS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b auth_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b commit_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b config_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b doc_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b hook_commands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands.auth_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands.auth_commands}
+{\xe \v penify_hook.commands.auth_commands}
+{\bkmkstart AAAAAAAAHT}
+{\bkmkend AAAAAAAAHT}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b save_credentials} (api_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b login} (api_url, dashboard_url)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v login\:penify_hook.commands.auth_commands}
+{\xe \v penify_hook.commands.auth_commands\:login}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.auth_commands.login (  {\i api_url},   {\i dashboard_url})}}
+\par
+{\bkmkstart AAAAAAAAHU}
+{\bkmkend AAAAAAAAHU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Open the login page in a web browser and capture the token via redirect.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1auth__commands_a78f375c58bb6f69f98675e6a9ac84655_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v save_credentials\:penify_hook.commands.auth_commands}
+{\xe \v penify_hook.commands.auth_commands\:save_credentials}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.auth_commands.save_credentials (  {\i api_key})}}
+\par
+{\bkmkstart AAAAAAAAHV}
+{\bkmkend AAAAAAAAHV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Save the API key in a priority-based manner.\par
+\par
+This function attempts to save the API key in two locations, based on priority:\par
+1. In a `.env` file located in the root of the Git repository if one is found.\par
+2. In a global `.penify` file located in the user's home directory as a\par
+fallback.  The function first tries to locate the Git repository using\par
+`recursive_search_git_folder`. If a Git repository is found, it reads the\par
+existing `.env` file (if present), updates or adds the API key under the key\par
+`PENIFY_API_TOKEN`, and writes the updated content back. If any error occurs\par
+during this process, it falls back to saving the credentials in the global\par
+`.penify` file. The function handles exceptions and prints appropriate error\par
+messages.\par
+\par
+Args:\par
+    api_key (str): The API key to save.\par
+\par
+Returns:\par
+    bool: True if the API key is saved successfully, False otherwise.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1auth__commands_aa3956ca1749d4218ea1dc6e5b6218b24_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1auth__commands_aa3956ca1749d4218ea1dc6e5b6218b24_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands.commit_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands.commit_commands}
+{\xe \v penify_hook.commands.commit_commands}
+{\bkmkstart AAAAAAAAHW}
+{\bkmkend AAAAAAAAHW}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b commit_code} (api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b setup_commit_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b handle_commit} (args)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v commit_code\:penify_hook.commands.commit_commands}
+{\xe \v penify_hook.commands.commit_commands\:commit_code}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.commit_commands.commit_code (  {\i api_url},   {\i token},   {\i message},   {\i open_terminal},   {\i generate_description},   {\i llm_model} = {\f2 None},   {\i llm_api_base} = {\f2 None},   {\i llm_api_key} = {\f2 None},   {\i jira_url} = {\f2 None},   {\i jira_user} = {\f2 None},   {\i jira_api_token} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAHX}
+{\bkmkend AAAAAAAAHX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Enhance Git commits with AI-powered commit messages.\par
+\par
+This function allows for the generation of enhanced commit messages using\par
+natural language processing models and optionally integrates with JIRA for\par
+additional context. It processes the current Git folder to find relevant files\par
+and generates a detailed commit message based on the provided parameters.\par
+\par
+Args:\par
+    api_url (str): URL of the API endpoint.\par
+    token (str): Authentication token for the API.\par
+    message (str): Initial commit message provided by the user.\par
+    open_terminal (bool): Whether to open the terminal after committing.\par
+    generate_description (bool): Whether to generate a detailed description in the commit message.\par
+    llm_model (str?): The language model to use for generating the commit message. Defaults to None.\par
+    llm_api_base (str?): Base URL of the LLM API. Defaults to None.\par
+    llm_api_key (str?): API key for accessing the LLM service. Defaults to None.\par
+    jira_url (str?): URL of the JIRA instance. Defaults to None.\par
+    jira_user (str?): Username for authenticating with JIRA. Defaults to None.\par
+    jira_api_token (str?): API token for accessing JIRA. Defaults to None.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1commit__commands_a62564c4e8ad59fc46d56cb0f9122a71a_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v handle_commit\:penify_hook.commands.commit_commands}
+{\xe \v penify_hook.commands.commit_commands\:handle_commit}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.commit_commands.handle_commit (  {\i args})}}
+\par
+{\bkmkstart AAAAAAAAHY}
+{\bkmkend AAAAAAAAHY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Handle commit functionality by processing arguments and invoking the\par
+appropriate commands.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1commit__commands_af4f739f524c38b437e4e47673d683e23_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v setup_commit_parser\:penify_hook.commands.commit_commands}
+{\xe \v penify_hook.commands.commit_commands\:setup_commit_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.commit_commands.setup_commit_parser (  {\i parser})}}
+\par
+{\bkmkstart AAAAAAAAHZ}
+{\bkmkend AAAAAAAAHZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Sets up an argument parser for generating smart commit messages.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1commit__commands_a8627583116eb78e31a4d3cdc16d2f15c_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands.config_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands}
+{\bkmkstart AAAAAAAAIA}
+{\bkmkend AAAAAAAAIA}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+None {\b load_env_files} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Path {\b get_penify_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Any {\b get_env_var_or_default} (str env_var, Any default=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b save_llm_config} (model, api_base, api_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b save_jira_config} (url, username, api_token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, str] {\b get_llm_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, str] {\b get_jira_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b config_llm_web} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b config_jira_web} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Optional[str] {\b get_token} ()\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b DOTENV_AVAILABLE} = True\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b path}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v config_jira_web\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:config_jira_web}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.config_commands.config_jira_web ()}}
+\par
+{\bkmkstart AAAAAAAAIB}
+{\bkmkend AAAAAAAAIB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Starts a web server for configuring JIRA settings.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_af115198ea5d6808ccb98733957f50b06_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v config_llm_web\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:config_llm_web}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.config_commands.config_llm_web ()}}
+\par
+{\bkmkstart AAAAAAAAIC}
+{\bkmkend AAAAAAAAIC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Starts an HTTP server for configuring LLM settings via a web interface.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a185dfc34a655ed80e6c95939b6f3c35c_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_env_var_or_default\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:get_env_var_or_default}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Any penify_hook.commands.config_commands.get_env_var_or_default (str  {\i env_var}, Any   {\i default} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAID}
+{\bkmkend AAAAAAAAID}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Get environment variable or return default value.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a3caf2b062dd33b1f1d7ddc7224f0ff87_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_jira_config\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:get_jira_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Dict[str, str] penify_hook.commands.config_commands.get_jira_config ()}}
+\par
+{\bkmkstart AAAAAAAAIE}
+{\bkmkend AAAAAAAAIE}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieve JIRA configuration from environment variables.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a15bf3685c4dcb5c15ba6a4055e484cf2_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_llm_config\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:get_llm_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Dict[str, str] penify_hook.commands.config_commands.get_llm_config ()}}
+\par
+{\bkmkstart AAAAAAAAIF}
+{\bkmkend AAAAAAAAIF}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieve LLM configuration from environment variables.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a6492bc8e7df6e38bb06ad05e572d4cc0_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_penify_config\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:get_penify_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Path penify_hook.commands.config_commands.get_penify_config ()}}
+\par
+{\bkmkstart AAAAAAAAIG}
+{\bkmkend AAAAAAAAIG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Returns the path to the `config.json` file within the `.penify` directory,\par
+creating it if necessary.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a6559a82d0bf727703d550d1003d3ed20_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_token\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:get_token}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Optional[str] penify_hook.commands.config_commands.get_token ()}}
+\par
+{\bkmkstart AAAAAAAAIH}
+{\bkmkend AAAAAAAAIH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieves an API token using a prioritized method.\par
+\par
+This function first attempts to load environment variables from all `.env`\par
+files and checks if the `PENIFY_API_TOKEN` environment variable is set. If\par
+found, it returns the token. If not, it looks for the API key in a\par
+configuration file named 'api_keys'. If both methods fail, it returns None.\par
+\par
+Returns:\par
+    str or None: The API token if found, otherwise None.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a5503d51c905e2f1b299b12d2a73bd812_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v load_env_files\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:load_env_files}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ None penify_hook.commands.config_commands.load_env_files ()}}
+\par
+{\bkmkstart AAAAAAAAII}
+{\bkmkend AAAAAAAAII}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Load environment variables from .env files in various locations with proper\par
+priority.\par
+\par
+This function loads environment variables from .env files located in different\par
+directories, prioritizing the current directory over the Git repo root and the\par
+user home directory. The loading process ensures that later files override\par
+earlier ones.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_aabe277132ce0bc0aacef951cf1dee2ae_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v save_jira_config\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:save_jira_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.config_commands.save_jira_config (  {\i url},   {\i username},   {\i api_token})}}
+\par
+{\bkmkstart AAAAAAAAIJ}
+{\bkmkend AAAAAAAAIJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Save JIRA configuration settings to a .env file.\par
+\par
+This function saves JIRA configuration following these steps: 1. Determine the\par
+target .env file location based on whether the current directory is inside a\par
+Git repository. 2. If inside a Git repo, use the Git repo root's .env file;\par
+otherwise, use the user home directory's .env file. 3. Read the existing\par
+content of the .env file (if it exists) to preserve other settings. 4. Update\par
+the .env content with the new JIRA configuration. 5. Write the updated content\par
+back to the .env file. 6. Optionally, reload environment variables to make\par
+changes immediately available.\par
+\par
+Args:\par
+    url (str): The JIRA URL to be saved in the .env file.\par
+    username (str): The JIRA username to be saved in the .env file.\par
+    api_token (str): The JIRA API token to be saved in the .env file.\par
+\par
+Returns:\par
+    bool: True if the configuration was successfully saved, False otherwise.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_ab2486ac2bf16b4a671e49625bfa4f9b4_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_ab2486ac2bf16b4a671e49625bfa4f9b4_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v save_llm_config\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:save_llm_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.config_commands.save_llm_config (  {\i model},   {\i api_base},   {\i api_key})}}
+\par
+{\bkmkstart AAAAAAAAIK}
+{\bkmkend AAAAAAAAIK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Save LLM configuration settings to an .env file.\par
+\par
+This function saves the LLM configuration following a specific priority: 1. Git\par
+repo root .env (if inside a git repo) 2. User home directory .env  It handles\par
+the detection of the Git repo root, reads the existing .env content, updates it\par
+with the new LLM configuration, and writes it back to the file. It also reloads\par
+the environment variables to make changes immediately available.\par
+\par
+Args:\par
+    model (str): The name of the language model.\par
+    api_base (str): The base URL for the API.\par
+    api_key (str): The API key for authentication.\par
+\par
+Returns:\par
+    bool: True if the configuration is saved successfully, False otherwise.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a4617bc5956e502c9555dc0dda0376df4_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1config__commands_a4617bc5956e502c9555dc0dda0376df4_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v DOTENV_AVAILABLE\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:DOTENV_AVAILABLE}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+bool penify_hook.commands.config_commands.DOTENV_AVAILABLE = True}}
+\par
+{\bkmkstart AAAAAAAAIL}
+{\bkmkend AAAAAAAAIL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v path\:penify_hook.commands.config_commands}
+{\xe \v penify_hook.commands.config_commands\:path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.commands.config_commands.path}}
+\par
+{\bkmkstart AAAAAAAAIM}
+{\bkmkend AAAAAAAAIM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands.doc_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands.doc_commands}
+{\xe \v penify_hook.commands.doc_commands}
+{\bkmkstart AAAAAAAAIN}
+{\bkmkend AAAAAAAAIN}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b generate_doc} (api_url, token, location=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b setup_docgen_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b handle_docgen} (args)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b docgen_description}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v generate_doc\:penify_hook.commands.doc_commands}
+{\xe \v penify_hook.commands.doc_commands\:generate_doc}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.doc_commands.generate_doc (  {\i api_url},   {\i token},   {\i location} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAIO}
+{\bkmkend AAAAAAAAIO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generates documentation based on the given parameters.\par
+\par
+This function initializes an API client using the provided API URL and token.\par
+It then generates documentation by analyzing the specified location, which can\par
+be a folder, a file, or the current working directory if no location is\par
+provided. The function handles different types of analysis based on the input\par
+location and reports any errors encountered during the process.\par
+\par
+Args:\par
+    api_url (str): The URL of the API to connect to for documentation generation.\par
+    token (str): The authentication token for accessing the API.\par
+    location (str?): The path to a specific file or folder to analyze. If not provided,\par
+        the current working directory is used.\par
+}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1doc__commands_a4daac68bc563432bf25c85dc78081a25_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v handle_docgen\:penify_hook.commands.doc_commands}
+{\xe \v penify_hook.commands.doc_commands\:handle_docgen}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.doc_commands.handle_docgen (  {\i args})}}
+\par
+{\bkmkstart AAAAAAAAIP}
+{\bkmkend AAAAAAAAIP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Handle document generation and hook management based on subcommands.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1doc__commands_a2006ab13bff718ef783868a910c0b704_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v setup_docgen_parser\:penify_hook.commands.doc_commands}
+{\xe \v penify_hook.commands.doc_commands\:setup_docgen_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.doc_commands.setup_docgen_parser (  {\i parser})}}
+\par
+{\bkmkstart AAAAAAAAIQ}
+{\bkmkend AAAAAAAAIQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Configure a parser for generating documentation using Git commands.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1doc__commands_acc7f4ead1b11951d885fa5c151c2cbe0_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v docgen_description\:penify_hook.commands.doc_commands}
+{\xe \v penify_hook.commands.doc_commands\:docgen_description}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.commands.doc_commands.docgen_description}}
+\par
+{\bkmkstart AAAAAAAAIR}
+{\bkmkend AAAAAAAAIR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\b Initial value:}{
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid 1 =  {\cf22 """Generate code documentation using Penify.}\par
+2 {\cf22 }\par
+3 {\cf22 This command requires you to be logged in to your Penify account.}\par
+4 {\cf22 You can generate documentation for:}\par
+5 {\cf22 - Current Git diff (default)}\par
+6 {\cf22 - Specific file}\par
+7 {\cf22 - Specific folder}\par
+8 {\cf22 """}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commands.hook_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commands.hook_commands}
+{\xe \v penify_hook.commands.hook_commands}
+{\bkmkstart AAAAAAAAIS}
+{\bkmkend AAAAAAAAIS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b install_git_hook} (location, token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b uninstall_git_hook} (location)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b HOOK_FILENAME} = "post-commit"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b HOOK_TEMPLATE}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v install_git_hook\:penify_hook.commands.hook_commands}
+{\xe \v penify_hook.commands.hook_commands\:install_git_hook}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.hook_commands.install_git_hook (  {\i location},   {\i token})}}
+\par
+{\bkmkstart AAAAAAAAIT}
+{\bkmkend AAAAAAAAIT}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Install a post-commit Git hook that generates documentation for changed files.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1hook__commands_adff8f5d3bf1c3795974a391ee95b72b2_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v uninstall_git_hook\:penify_hook.commands.hook_commands}
+{\xe \v penify_hook.commands.hook_commands\:uninstall_git_hook}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commands.hook_commands.uninstall_git_hook (  {\i location})}}
+\par
+{\bkmkstart AAAAAAAAIU}
+{\bkmkend AAAAAAAAIU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Uninstalls the post-commit hook from the specified location.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1commands_1_1hook__commands_a81543eb5fa835fd1237f24e8bce6201d_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v HOOK_FILENAME\:penify_hook.commands.hook_commands}
+{\xe \v penify_hook.commands.hook_commands\:HOOK_FILENAME}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.commands.hook_commands.HOOK_FILENAME = "post-commit"}}
+\par
+{\bkmkstart AAAAAAAAIV}
+{\bkmkend AAAAAAAAIV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v HOOK_TEMPLATE\:penify_hook.commands.hook_commands}
+{\xe \v penify_hook.commands.hook_commands\:HOOK_TEMPLATE}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.commands.hook_commands.HOOK_TEMPLATE}}
+\par
+{\bkmkstart AAAAAAAAIW}
+{\bkmkend AAAAAAAAIW}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\b Initial value:}{
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid 1 =  {\cf22 """#!/bin/sh}\par
+2 {\cf22 # This is a post-commit hook generated by penify.}\par
+3 {\cf22 # Automatically generates documentation for changed files after each commit.}\par
+4 {\cf22 }\par
+5 {\cf22 penify docgen -gf \{git_folder_path\} -t \{token\}}\par
+6 {\cf22 """}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commit_analyzer Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commit_analyzer}
+{\xe \v penify_hook.commit_analyzer}
+{\bkmkstart AAAAAAAAIX}
+{\bkmkend AAAAAAAAIX}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b CommitDocGenHook}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.config_command Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.config_command}
+{\xe \v penify_hook.config_command}
+{\bkmkstart AAAAAAAAJE}
+{\bkmkend AAAAAAAAJE}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b setup_config_parser} (parent_parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b handle_config} (args)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v handle_config\:penify_hook.config_command}
+{\xe \v penify_hook.config_command\:handle_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.config_command.handle_config (  {\i args})}}
+\par
+{\bkmkstart AAAAAAAAJF}
+{\bkmkend AAAAAAAAJF}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Handle configuration settings based on the specified config type.\par
+\par
+This function processes different types of configurations such as LLM (Language\par
+Model) and JIRA. It saves configurations, sets up web-based configurations, and\par
+verifies JIRA connections. Depending on the `args.config_type`, it imports\par
+necessary modules, handles configuration saving or setup, and optionally\par
+verifies JIRA connectivity.\par
+\par
+Args:\par
+    args (argparse.Namespace): Command-line arguments containing the type of configuration to handle.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1config__command_a240e5331681eb574ac319d7458783bde_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v setup_config_parser\:penify_hook.config_command}
+{\xe \v penify_hook.config_command\:setup_config_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.config_command.setup_config_parser (  {\i parent_parser})}}
+\par
+{\bkmkstart AAAAAAAAJG}
+{\bkmkend AAAAAAAAJG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Set up configuration parsers with subcommands for LLM and JIRA settings.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1config__command_a4f3eb92164a69df1446d745f8a09285e_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.constants Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.constants}
+{\xe \v penify_hook.constants}
+{\bkmkstart AAAAAAAAJH}
+{\bkmkend AAAAAAAAJH}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b API_URL} = 'http://localhost:8000/api'\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b DASHBOARD_URL} = "https://dashboard.penify.dev/auth/localhost/login"\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v API_URL\:penify_hook.constants}
+{\xe \v penify_hook.constants\:API_URL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.constants.API_URL = 'http://localhost:8000/api'}}
+\par
+{\bkmkstart AAAAAAAAJI}
+{\bkmkend AAAAAAAAJI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v DASHBOARD_URL\:penify_hook.constants}
+{\xe \v penify_hook.constants\:DASHBOARD_URL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.constants.DASHBOARD_URL = "https://dashboard.penify.dev/auth/localhost/login"}}
+\par
+{\bkmkstart AAAAAAAAJJ}
+{\bkmkend AAAAAAAAJJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.file_analyzer Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.file_analyzer}
+{\xe \v penify_hook.file_analyzer}
+{\bkmkstart AAAAAAAAJK}
+{\bkmkend AAAAAAAAJK}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b FileAnalyzerGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b logger} = logging.getLogger(__name__)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v logger\:penify_hook.file_analyzer}
+{\xe \v penify_hook.file_analyzer\:logger}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.file_analyzer.logger = logging.getLogger(__name__)}}
+\par
+{\bkmkstart AAAAAAAAJL}
+{\bkmkend AAAAAAAAJL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.folder_analyzer Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.folder_analyzer}
+{\xe \v penify_hook.folder_analyzer}
+{\bkmkstart AAAAAAAAJR}
+{\bkmkend AAAAAAAAJR}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b FolderAnalyzerGenHook}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.git_analyzer Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.git_analyzer}
+{\xe \v penify_hook.git_analyzer}
+{\bkmkstart AAAAAAAAJW}
+{\bkmkend AAAAAAAAJW}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b GitDocGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b logger} = logging.getLogger(__name__)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v logger\:penify_hook.git_analyzer}
+{\xe \v penify_hook.git_analyzer\:logger}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.git_analyzer.logger = logging.getLogger(__name__)}}
+\par
+{\bkmkstart AAAAAAAAJX}
+{\bkmkend AAAAAAAAJX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.jira_client Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.jira_client}
+{\xe \v penify_hook.jira_client}
+{\bkmkstart AAAAAAAAKD}
+{\bkmkend AAAAAAAAKD}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b JiraClient}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b JIRA_AVAILABLE} = True\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v JIRA_AVAILABLE\:penify_hook.jira_client}
+{\xe \v penify_hook.jira_client\:JIRA_AVAILABLE}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+bool penify_hook.jira_client.JIRA_AVAILABLE = True}}
+\par
+{\bkmkstart AAAAAAAAKE}
+{\bkmkend AAAAAAAAKE}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.llm_client Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.llm_client}
+{\xe \v penify_hook.llm_client}
+{\bkmkstart AAAAAAAAKV}
+{\bkmkend AAAAAAAAKV}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b LLMClient}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.login_command Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.login_command}
+{\xe \v penify_hook.login_command}
+{\bkmkstart AAAAAAAALC}
+{\bkmkend AAAAAAAALC}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b setup_login_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b handle_login} (args)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v handle_login\:penify_hook.login_command}
+{\xe \v penify_hook.login_command\:handle_login}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.login_command.handle_login (  {\i args})}}
+\par
+{\bkmkstart AAAAAAAALD}
+{\bkmkend AAAAAAAALD}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Initiates a user login process using predefined constants and the `login`\par
+function.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1login__command_ae4bf932fbafeff834b0a0c5a37f74ccd_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1login__command_ae4bf932fbafeff834b0a0c5a37f74ccd_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v setup_login_parser\:penify_hook.login_command}
+{\xe \v penify_hook.login_command\:setup_login_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.login_command.setup_login_parser (  {\i parser})}}
+\par
+{\bkmkstart AAAAAAAALE}
+{\bkmkend AAAAAAAALE}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Set up command-line arguments for login.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1login__command_aae63db4c484797bead34b7d874020c6a_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.main Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.main}
+{\xe \v penify_hook.main}
+{\bkmkstart AAAAAAAALF}
+{\bkmkend AAAAAAAALF}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b main} ()\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v main\:penify_hook.main}
+{\xe \v penify_hook.main\:main}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.main.main ()}}
+\par
+{\bkmkstart AAAAAAAALG}
+{\bkmkend AAAAAAAALG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Main function to handle command-line interface (CLI) interactions with Penify\par
+services.\par
+\par
+This tool provides a command-line interface for generating smart commit\par
+messages, configuring local-LLM and JIRA, and generating code documentation. It\par
+supports basic commands that do not require login and advanced commands that\par
+require user authentication. The `--version` flag can be used to display the\par
+version information.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1main_a16838b20df4bd14ee4b5e1dd2906738f_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.ui_utils Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils}
+{\bkmkstart AAAAAAAALH}
+{\bkmkend AAAAAAAALH}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_info} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_success} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_warning} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_error} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_highlight} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b format_file_path} (file_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_info} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_success} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_warning} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_error} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_processing} (file_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_status} (status, message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b create_progress_bar} (total, desc="Processing", unit="item")\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b create_stage_progress_bar} (stages, desc="Processing")\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b update_stage} (pbar, stage_name)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b autoreset}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b INFO_COLOR} = Fore.CYAN\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b SUCCESS_COLOR} = Fore.GREEN\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b WARNING_COLOR} = Fore.YELLOW\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b ERROR_COLOR} = Fore.RED\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b HIGHLIGHT_COLOR} = Fore.BLUE\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b NEUTRAL_COLOR} = Fore.WHITE\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b SUCCESS_SYMBOL} = "\'E2\'9C\'93"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b WARNING_SYMBOL} = "\'E2\'97\'8B"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b ERROR_SYMBOL} = "\'E2\'9C\'97"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b PROCESSING_SYMBOL} = "\'E2\'9F\'B3"\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Detailed Description\par
+\pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid UI utilities for Penify CLI.\par
+\par
+This module provides utility functions for consistent UI formatting,\par
+colored output, and progress indicators across the Penify CLI application.\par
+}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v create_progress_bar\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:create_progress_bar}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.create_progress_bar (  {\i total},   {\i desc} = {\f2 "Processing"},   {\i unit} = {\f2 "item"})}}
+\par
+{\bkmkstart AAAAAAAALI}
+{\bkmkend AAAAAAAALI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Create a tqdm progress bar with consistent styling.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a12b92532b1458af94f3649d411b5505c_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v create_stage_progress_bar\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:create_stage_progress_bar}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.create_stage_progress_bar (  {\i stages},   {\i desc} = {\f2 "Processing"})}}
+\par
+{\bkmkstart AAAAAAAALJ}
+{\bkmkend AAAAAAAALJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Create a tqdm progress bar for processing stages with consistent styling.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a3da02cd1140179a9ce60f62c85fccfef_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_error\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_error}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_error (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALK}
+{\bkmkend AAAAAAAALK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format an error message with the specified error color.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a4dd934568897433fa73f9cc182ac4a3e_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_file_path\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_file_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_file_path (  {\i file_path})}}
+\par
+{\bkmkstart AAAAAAAALL}
+{\bkmkend AAAAAAAALL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format a file path with a warning color.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_af3441fb3c2c3850b8b3b6455a9fdaba4_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_highlight\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_highlight}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_highlight (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALM}
+{\bkmkend AAAAAAAALM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format a highlighted message with appropriate color.}
+ \par
+}}
+{\xe \v format_info\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_info}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_info (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALN}
+{\bkmkend AAAAAAAALN}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format an informational message with appropriate color.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a92c3e466d1912058167be2eacf85b9f6_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_success\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_success}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_success (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALO}
+{\bkmkend AAAAAAAALO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Formats a success message with green color and reset style.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a532cdb4de7c679ce8b29c3e9116c4776_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_warning\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:format_warning}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.format_warning (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALP}
+{\bkmkend AAAAAAAALP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format a warning message with appropriate color.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a0a6fd2613c6fe053b6e4356cd9e5cda2_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_error\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_error}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_error (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALQ}
+{\bkmkend AAAAAAAALQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Print an error message with appropriate formatting.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a6f0acd7dd91abfe67d0807803bc3b65f_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_info\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_info}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_info (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALR}
+{\bkmkend AAAAAAAALR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Prints an informational message with formatting.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a811f0adf6e9bf71510c379b6fa155e44_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_processing\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_processing}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_processing (  {\i file_path})}}
+\par
+{\bkmkstart AAAAAAAALS}
+{\bkmkend AAAAAAAALS}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Print a processing message for a specified file.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_adfcbbfe39029ab6d1dd33e7bf75ae115_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_status\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_status}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_status (  {\i status},   {\i message})}}
+\par
+{\bkmkstart AAAAAAAALT}
+{\bkmkend AAAAAAAALT}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Print a status message with an appropriate symbol.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_aa6e684c00e26199440137a87ed9b195c_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_success\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_success}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_success (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALU}
+{\bkmkend AAAAAAAALU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Prints a formatted success message.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a2b16aa6b68a9edea5f29f84f1c4be79a_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v print_warning\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:print_warning}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.print_warning (  {\i message})}}
+\par
+{\bkmkstart AAAAAAAALV}
+{\bkmkend AAAAAAAALV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Prints a warning message with formatted output.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a1ffbb9671dbe233770268e2dd66a67fa_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v update_stage\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:update_stage}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.ui_utils.update_stage (  {\i pbar},   {\i stage_name})}}
+\par
+{\bkmkstart AAAAAAAALW}
+{\bkmkend AAAAAAAALW}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Update the progress bar with a new stage name.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1ui__utils_a5a7340d0fc60fb80f17514d60bf45f1d_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v autoreset\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:autoreset}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.autoreset}}
+\par
+{\bkmkstart AAAAAAAALX}
+{\bkmkend AAAAAAAALX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v ERROR_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:ERROR_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.ERROR_COLOR = Fore.RED}}
+\par
+{\bkmkstart AAAAAAAALY}
+{\bkmkend AAAAAAAALY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v ERROR_SYMBOL\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:ERROR_SYMBOL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.ui_utils.ERROR_SYMBOL = "\'E2\'9C\'97"}}
+\par
+{\bkmkstart AAAAAAAALZ}
+{\bkmkend AAAAAAAALZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v HIGHLIGHT_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:HIGHLIGHT_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.HIGHLIGHT_COLOR = Fore.BLUE}}
+\par
+{\bkmkstart AAAAAAAAMA}
+{\bkmkend AAAAAAAAMA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v INFO_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:INFO_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.INFO_COLOR = Fore.CYAN}}
+\par
+{\bkmkstart AAAAAAAAMB}
+{\bkmkend AAAAAAAAMB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v NEUTRAL_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:NEUTRAL_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.NEUTRAL_COLOR = Fore.WHITE}}
+\par
+{\bkmkstart AAAAAAAAMC}
+{\bkmkend AAAAAAAAMC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v PROCESSING_SYMBOL\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:PROCESSING_SYMBOL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.ui_utils.PROCESSING_SYMBOL = "\'E2\'9F\'B3"}}
+\par
+{\bkmkstart AAAAAAAAMD}
+{\bkmkend AAAAAAAAMD}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v SUCCESS_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:SUCCESS_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.SUCCESS_COLOR = Fore.GREEN}}
+\par
+{\bkmkstart AAAAAAAAME}
+{\bkmkend AAAAAAAAME}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v SUCCESS_SYMBOL\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:SUCCESS_SYMBOL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.ui_utils.SUCCESS_SYMBOL = "\'E2\'9C\'93"}}
+\par
+{\bkmkstart AAAAAAAAMF}
+{\bkmkend AAAAAAAAMF}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v WARNING_COLOR\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:WARNING_COLOR}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.ui_utils.WARNING_COLOR = Fore.YELLOW}}
+\par
+{\bkmkstart AAAAAAAAMG}
+{\bkmkend AAAAAAAAMG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v WARNING_SYMBOL\:penify_hook.ui_utils}
+{\xe \v penify_hook.ui_utils\:WARNING_SYMBOL}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+string penify_hook.ui_utils.WARNING_SYMBOL = "\'E2\'97\'8B"}}
+\par
+{\bkmkstart AAAAAAAAMH}
+{\bkmkend AAAAAAAAMH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.utils Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.utils}
+{\xe \v penify_hook.utils}
+{\bkmkstart AAAAAAAAMI}
+{\bkmkend AAAAAAAAMI}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b GitRepoNotFoundError}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b get_repo_details} (Repo repo)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b recursive_search_git_folder} (folder_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b find_git_parent} (path)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b logger} = logging.getLogger(__name__)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v find_git_parent\:penify_hook.utils}
+{\xe \v penify_hook.utils\:find_git_parent}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.utils.find_git_parent (  {\i path})}}
+\par
+{\bkmkstart AAAAAAAAMJ}
+{\bkmkend AAAAAAAAMJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Traverse up from the given path to find the nearest directory containing a .git\par
+subdirectory.}
+ \par
+}}
+{\xe \v get_repo_details\:penify_hook.utils}
+{\xe \v penify_hook.utils\:get_repo_details}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.utils.get_repo_details (Repo  {\i repo})}}
+\par
+{\bkmkstart AAAAAAAAMK}
+{\bkmkend AAAAAAAAMK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Determine the details of a repository including its remote URL, hosting\par
+service, organization name, and repository name.\par
+\par
+This function extracts the remote URL from the given Git repository object and\par
+determines the hosting service (e.g., GitHub, Azure DevOps, Bitbucket, GitLab).\par
+It then parses the URL to extract the organization name and repository name. If\par
+the URL does not match any known hosting service pattern, it sets the hosting\par
+service as "Unknown". The function handles exceptions that may occur during\par
+this process and logs an error message if needed.\par
+\par
+Args:\par
+    repo (Repo): A GitPython Repo object representing the local git repository.\par
+\par
+Returns:\par
+    dict: A dictionary containing the organization name, repository name, and hosting\par
+        service.\par
+}
+ \par
+}}
+{\xe \v recursive_search_git_folder\:penify_hook.utils}
+{\xe \v penify_hook.utils\:recursive_search_git_folder}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.utils.recursive_search_git_folder (  {\i folder_path})}}
+\par
+{\bkmkstart AAAAAAAAML}
+{\bkmkend AAAAAAAAML}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Recursively searches for a .git folder starting from the given directory.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1utils_a95c3f9c80860d6a2e2d061d2fb660a3f_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacepenify__hook_1_1utils_a95c3f9c80860d6a2e2d061d2fb660a3f_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v logger\:penify_hook.utils}
+{\xe \v penify_hook.utils\:logger}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.utils.logger = logging.getLogger(__name__)}}
+\par
+{\bkmkstart AAAAAAAAMM}
+{\bkmkend AAAAAAAAMM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+setup Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v setup}
+{\xe \v setup}
+{\bkmkstart AAAAAAAAMO}
+{\bkmkend AAAAAAAAMO}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b name}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b version}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b packages}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b install_requires}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b entry_points}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b author}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b author_email}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b description}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b long_description}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b long_description_content_type}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b url}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b classifiers}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b python_requires}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variable Documentation\par
+\pard\plain 
+{\xe \v author\:setup}
+{\xe \v setup\:author}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.author}}
+\par
+{\bkmkstart AAAAAAAAMP}
+{\bkmkend AAAAAAAAMP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v author_email\:setup}
+{\xe \v setup\:author_email}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.author_email}}
+\par
+{\bkmkstart AAAAAAAAMQ}
+{\bkmkend AAAAAAAAMQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v classifiers\:setup}
+{\xe \v setup\:classifiers}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.classifiers}}
+\par
+{\bkmkstart AAAAAAAAMR}
+{\bkmkend AAAAAAAAMR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v description\:setup}
+{\xe \v setup\:description}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.description}}
+\par
+{\bkmkstart AAAAAAAAMS}
+{\bkmkend AAAAAAAAMS}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v entry_points\:setup}
+{\xe \v setup\:entry_points}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.entry_points}}
+\par
+{\bkmkstart AAAAAAAAMT}
+{\bkmkend AAAAAAAAMT}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v install_requires\:setup}
+{\xe \v setup\:install_requires}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.install_requires}}
+\par
+{\bkmkstart AAAAAAAAMU}
+{\bkmkend AAAAAAAAMU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v long_description\:setup}
+{\xe \v setup\:long_description}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.long_description}}
+\par
+{\bkmkstart AAAAAAAAMV}
+{\bkmkend AAAAAAAAMV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v long_description_content_type\:setup}
+{\xe \v setup\:long_description_content_type}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.long_description_content_type}}
+\par
+{\bkmkstart AAAAAAAAMW}
+{\bkmkend AAAAAAAAMW}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v name\:setup}
+{\xe \v setup\:name}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.name}}
+\par
+{\bkmkstart AAAAAAAAMX}
+{\bkmkend AAAAAAAAMX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v packages\:setup}
+{\xe \v setup\:packages}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.packages}}
+\par
+{\bkmkstart AAAAAAAAMY}
+{\bkmkend AAAAAAAAMY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v python_requires\:setup}
+{\xe \v setup\:python_requires}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.python_requires}}
+\par
+{\bkmkstart AAAAAAAAMZ}
+{\bkmkend AAAAAAAAMZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v url\:setup}
+{\xe \v setup\:url}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.url}}
+\par
+{\bkmkstart AAAAAAAANA}
+{\bkmkend AAAAAAAANA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v version\:setup}
+{\xe \v setup\:version}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+setup.version}}
+\par
+{\bkmkstart AAAAAAAANB}
+{\bkmkend AAAAAAAANB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests}
+{\xe \v tests}
+{\bkmkstart AAAAAAAANC}
+{\bkmkend AAAAAAAANC}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b conftest}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b test_commit_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b test_config_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b test_doc_commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b test_web_config}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.conftest Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests.conftest}
+{\xe \v tests.conftest}
+{\bkmkstart AAAAAAAAND}
+{\bkmkend AAAAAAAAND}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_commit_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_commit_commands}
+{\xe \v tests.test_commit_commands}
+{\bkmkstart AAAAAAAANE}
+{\bkmkend AAAAAAAANE}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b TestCommitCommands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_config_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_config_commands}
+{\xe \v tests.test_config_commands}
+{\bkmkstart AAAAAAAANS}
+{\bkmkend AAAAAAAANS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b TestConfigCommands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_doc_commands Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_doc_commands}
+{\xe \v tests.test_doc_commands}
+{\bkmkstart AAAAAAAAOG}
+{\bkmkend AAAAAAAAOG}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_no_location} (mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_file_location} (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_folder_location} (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_error_handling} (mock_api_client, mock_git_analyzer, mock_exit)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_setup_docgen_parser} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_handle_docgen_install_hook} (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_handle_docgen_uninstall_hook} (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_handle_docgen_generate} (mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_handle_docgen_no_token} (mock_exit, mock_get_token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_with_file_exception} (mock_api_client, mock_getcwd)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_generate_doc_with_folder_exception} (mock_api_client, mock_getcwd)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Function Documentation\par
+\pard\plain 
+{\xe \v test_generate_doc_error_handling\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_error_handling}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_error_handling (  {\i mock_api_client},   {\i mock_git_analyzer},   {\i mock_exit})}}
+\par
+{\bkmkstart AAAAAAAAOH}
+{\bkmkend AAAAAAAAOH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generate a documentation string for the provided code snippet using\par
+Google Docstring style.\par
+\par
+Short one line description: Test function to ensure proper error\par
+handling during API calls with GitAnalyzer.  Multiline long description:\par
+This test function is designed to verify that the generate_doc function\par
+handles exceptions correctly when an error occurs during API interaction\par
+with GitAnalyzer. It sets up a mock API client and a mock Git analyzer,\par
+causing the analyzer to raise an exception to simulate a failure\par
+condition. The function then asserts that the exit code is set to 1 when\par
+the error handling mechanism is invoked.\par
+\par
+Args:\par
+    mock_api_client (MagicMock): A mock object simulating the API client.\par
+    mock_git_analyzer (MagicMock): A mock object simulating the Git analyzer, configured to raise an\par
+        exception.\par
+    mock_exit (MagicMock): A mock object representing the exit function, which should be called\par
+        with an error code.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_aec76cc25c23476794234cdadbcaef0c0_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_generate_doc_file_location\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_file_location}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_file_location (  {\i mock_api_client},   {\i mock_folder_analyzer},   {\i mock_file_analyzer},   {\i mock_git_analyzer})}}
+\par
+{\bkmkstart AAAAAAAAOI}
+{\bkmkend AAAAAAAAOI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test generating a documentation file location.\par
+\par
+This function tests the process of generating a documentation file\par
+location using mock objects for API client, folder analyzer, file\par
+analyzer, and Git analyzer. It sets up the necessary mocks, calls the\par
+`generate_doc` function with specified parameters, and asserts that the\par
+appropriate methods on the mock objects are called as expected.\par
+\par
+Args:\par
+    mock_api_client (MagicMock): Mock object for the API client.\par
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.\par
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.\par
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a0e74c920f258f442914771164fe26b45_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_generate_doc_folder_location\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_folder_location}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_folder_location (  {\i mock_api_client},   {\i mock_folder_analyzer},   {\i mock_file_analyzer},   {\i mock_git_analyzer})}}
+\par
+{\bkmkstart AAAAAAAAOJ}
+{\bkmkend AAAAAAAAOJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the function to generate documentation for a folder location.\par
+\par
+It sets up mock objects for API client, folder analyzer, file analyzer,\par
+and Git analyzer, then calls the `generate_doc` function with specified\par
+parameters. Finally, it asserts that the correct methods on the mock\par
+objects were called as expected.\par
+\par
+Args:\par
+    mock_api_client (MagicMock): Mock object for the API client.\par
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.\par
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.\par
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a4bb75610e40d94d42bc169b25403c186_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_generate_doc_no_location\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_no_location}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_no_location (  {\i mock_getcwd},   {\i mock_api_client},   {\i mock_folder_analyzer},   {\i mock_file_analyzer},   {\i mock_git_analyzer})}}
+\par
+{\bkmkstart AAAAAAAAOK}
+{\bkmkend AAAAAAAAOK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test function to generate documentation without location information.\par
+\par
+This function sets up mocks for the API client, current working\par
+directory, and Git analyzer. It then calls the `generate_doc` function\par
+with a fake API URL and token. The function is expected to initialize\par
+the API client, configure the Git analyzer, and run it without any\par
+location information.\par
+\par
+Args:\par
+    mock_getcwd (MagicMock): Mock for os.getcwd().\par
+    mock_api_client (MagicMock): Mock for creating an API client.\par
+    mock_folder_analyzer (MagicMock): Mock for folder analysis.\par
+    mock_file_analyzer (MagicMock): Mock for file analysis.\par
+    mock_git_analyzer (MagicMock): Mock for Git analyzer setup.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a806110833eb0aad547156faf014b31d8_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_generate_doc_with_file_exception\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_with_file_exception}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_with_file_exception (  {\i mock_api_client},   {\i mock_getcwd})}}
+\par
+{\bkmkstart AAAAAAAAOL}
+{\bkmkend AAAAAAAAOL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generate documentation from a Python source file.\par
+\par
+This function reads a Python file and generates a docstring based on its\par
+content. It uses mock objects to simulate API calls and directory\par
+operations during testing.\par
+\par
+Args:\par
+    mock_api_client (unittest.mock.MagicMock): A mock object for simulating API client behavior.\par
+    mock_getcwd (unittest.mock.MagicMock): A mock object for simulating the current working directory function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a335e7fd4912192c7276cf31bbebc6eb0_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_generate_doc_with_folder_exception\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_generate_doc_with_folder_exception}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_generate_doc_with_folder_exception (  {\i mock_api_client},   {\i mock_getcwd})}}
+\par
+{\bkmkstart AAAAAAAAOM}
+{\bkmkend AAAAAAAAOM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generate documentation from a given API endpoint and save it to a\par
+folder.\par
+\par
+This function fetches data from the specified API endpoint, processes\par
+it, and saves the generated documentation in the provided folder. If an\par
+error occurs during the fetching process, a SystemExit exception is\par
+raised with an appropriate message.\par
+\par
+Args:\par
+    api_url (str): The URL of the API endpoint from which data will be fetched.\par
+    token (str): The authentication token required to access the API.\par
+    folder_path (str): The path to the folder where the documentation will be saved.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a64165ddfdb3071a88422f080f0e529a3_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_handle_docgen_generate\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_handle_docgen_generate}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_handle_docgen_generate (  {\i mock_get_token},   {\i mock_generate_doc},   {\i mock_uninstall_hook},   {\i mock_install_hook})}}
+\par
+{\bkmkstart AAAAAAAAON}
+{\bkmkend AAAAAAAAON}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the direct documentation generation functionality.\par
+\par
+This function tests the `handle_docgen` function when no subcommand is\par
+provided. It verifies that the document generation hook is called and\par
+the uninstall and install hooks are not called.\par
+\par
+Args:\par
+    mock_get_token (MagicMock): Mocked function to get authentication token.\par
+    mock_generate_doc (MagicMock): Mocked function for generating documentation.\par
+    mock_uninstall_hook (MagicMock): Mocked function for uninstalling the document generation hook.\par
+    mock_install_hook (MagicMock): Mocked function for installing the document generation hook.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_ab158ffa48469b6c097a7a55fcb20c21a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_handle_docgen_install_hook\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_handle_docgen_install_hook}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_handle_docgen_install_hook (  {\i mock_exit},   {\i mock_get_token},   {\i mock_generate_doc},   {\i mock_uninstall_hook},   {\i mock_install_hook})}}
+\par
+{\bkmkstart AAAAAAAAOO}
+{\bkmkend AAAAAAAAOO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the handling of the 'install-hook' subcommand.\par
+\par
+This function sets up a mock environment where it simulates the\par
+execution of the 'install-hook' subcommand. It verifies that the\par
+`mock_install_hook` is called with the correct arguments, while\par
+`mock_generate_doc` and `mock_uninstall_hook` are not called.\par
+\par
+Args:\par
+    mock_exit (MagicMock): Mock object for sys.exit.\par
+    mock_get_token (MagicMock): Mock object to simulate fetching a token.\par
+    mock_generate_doc (MagicMock): Mock object to simulate generating documentation.\par
+    mock_uninstall_hook (MagicMock): Mock object to simulate uninstalling a hook.\par
+    mock_install_hook (MagicMock): Mock object to simulate installing a hook.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_ab74688baa8c9b5ba302c2877a9789d05_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_handle_docgen_no_token\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_handle_docgen_no_token}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_handle_docgen_no_token (  {\i mock_exit},   {\i mock_get_token})}}
+\par
+{\bkmkstart AAAAAAAAOP}
+{\bkmkend AAAAAAAAOP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the behavior of the `handle_docgen` function when no token is\par
+provided.\par
+\par
+This function asserts that if no token is returned by `mock_get_token`,\par
+the `handle_docgen` function will call `mock_exit` with a status code of\par
+1.\par
+\par
+Args:\par
+    mock_exit (MagicMock): A MagicMock object simulating the `exit` function.\par
+    mock_get_token (MagicMock): A MagicMock object simulating the `get_token` function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_af9b01e5fc89255cac96747fa081c442c_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_handle_docgen_uninstall_hook\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_handle_docgen_uninstall_hook}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_handle_docgen_uninstall_hook (  {\i mock_exit},   {\i mock_get_token},   {\i mock_generate_doc},   {\i mock_uninstall_hook},   {\i mock_install_hook})}}
+\par
+{\bkmkstart AAAAAAAAOQ}
+{\bkmkend AAAAAAAAOQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the uninstall-hook subcommand of the handle_docgen function.\par
+This test case sets up a mock environment and verifies that the\par
+uninstall-hook is called with the correct location, while generate_doc\par
+and install_hook are not called.\par
+\par
+Args:\par
+    mock_exit (MagicMock): A mock for the exit function.\par
+    mock_get_token (MagicMock): A mock for the get_token function.\par
+    mock_generate_doc (MagicMock): A mock for the generate_doc function.\par
+    mock_uninstall_hook (MagicMock): A mock for the uninstall_hook function.\par
+    mock_install_hook (MagicMock): A mock for the install_hook function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a1458af9ad0128c3ca1263b552fd5e482_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_setup_docgen_parser\:tests.test_doc_commands}
+{\xe \v tests.test_doc_commands\:test_setup_docgen_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_doc_commands.test_setup_docgen_parser ()}}
+\par
+{\bkmkstart AAAAAAAAOR}
+{\bkmkend AAAAAAAAOR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the setup_docgen_parser function to ensure it properly configures\par
+the ArgumentParser for docgen options.\par
+\par
+It verifies that the parser correctly sets up docgen options and handles\par
+different subcommands like 'install-hook' and 'uninstall-hook'.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "namespacetests_1_1test__doc__commands_a0f27751d0ba2acfe40ef7e85bccf47d7_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_web_config Namespace Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_web_config}
+{\xe \v tests.test_web_config}
+{\bkmkstart AAAAAAAAOS}
+{\bkmkend AAAAAAAAOS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b TestWebConfig}\par
+}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+Class Documentation{\tc \v Class Documentation}
+\par \pard\plain 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.api_client.APIClient Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient}
+{\bkmkstart AAAAAAAAGU}
+{\bkmkend AAAAAAAAGU}
+Collaboration diagram for penify_hook.api_client.APIClient:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1api__client_1_1APIClient__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, {\b api_url}, str api_token=None, str bearer_token=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b send_file_for_docstring_generation} (self, file_name, content, line_numbers, repo_details=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b generate_commit_summary} (self, git_diff, str instruction="", repo_details=None, dict jira_context=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+list[str] {\b get_supported_file_types} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b generate_commit_summary_with_llm} (self, diff, message, bool generate_description, repo_details, {\b LLMClient} llm_client, jira_context=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b get_api_key} (self)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b api_url}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b AUTH_TOKEN}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b BEARER_TOKEN}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.api_client.APIClient.__init__ (  {\i self},   {\i api_url}, str   {\i api_token} = {\f2 None}, str   {\i bearer_token} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAGV}
+{\bkmkend AAAAAAAAGV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v generate_commit_summary\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:generate_commit_summary}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.api_client.APIClient.generate_commit_summary (  {\i self},   {\i git_diff}, str   {\i instruction} = {\f2 ""},   {\i repo_details} = {\f2 None}, dict   {\i jira_context} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAGW}
+{\bkmkend AAAAAAAAGW}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generates a commit summary by sending a POST request to the API endpoint.\par
+\par
+This function constructs a payload containing the git diff and any additional\par
+instructions provided. It then sends this payload to a specified API endpoint\par
+to generate a summary of the commit. If the request is successful, it returns\par
+the response from the API; otherwise, it returns None. The function also\par
+handles optional repository details and JIRA context if they are provided.\par
+\par
+Args:\par
+    git_diff (str): The git diff of the commit.\par
+    instruction (str): Additional instruction for the commit. Defaults to "".\par
+    repo_details (dict): Details of the git repository. Defaults to None.\par
+    jira_context (dict): JIRA issue details to enhance the commit summary. Defaults to None.\par
+\par
+Returns:\par
+    dict: The response from the API if the request is successful, None otherwise.\par
+}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1api__client_1_1APIClient_a7ff74798e7d428b4e2f20095287eb2ce_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v generate_commit_summary_with_llm\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:generate_commit_summary_with_llm}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.api_client.APIClient.generate_commit_summary_with_llm (  {\i self},   {\i diff},   {\i message}, bool  {\i generate_description},   {\i repo_details}, {\b LLMClient}  {\i llm_client},   {\i jira_context} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAGX}
+{\bkmkend AAAAAAAAGX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generates a commit summary using a local LLM client; falls back to API on\par
+error.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1api__client_1_1APIClient_ac0ada470b897935f9fb372cd0e7e51e3_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_api_key\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:get_api_key}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.api_client.APIClient.get_api_key (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAGY}
+{\bkmkend AAAAAAAAGY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Fetch an API key from a specified URL using a Bearer token.}
+ \par
+}}
+{\xe \v get_supported_file_types\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:get_supported_file_types}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ list[str] penify_hook.api_client.APIClient.get_supported_file_types (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAGZ}
+{\bkmkend AAAAAAAAGZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieve supported file types from the API or return a default list.}
+ \par
+}}
+{\xe \v send_file_for_docstring_generation\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:send_file_for_docstring_generation}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.api_client.APIClient.send_file_for_docstring_generation (  {\i self},   {\i file_name},   {\i content},   {\i line_numbers},   {\i repo_details} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAHA}
+{\bkmkend AAAAAAAAHA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Send file content and modified lines to the API and return modified content.}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v api_url\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:api_url}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.api_client.APIClient.api_url}}
+\par
+{\bkmkstart AAAAAAAAHB}
+{\bkmkend AAAAAAAAHB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v AUTH_TOKEN\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:AUTH_TOKEN}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.api_client.APIClient.AUTH_TOKEN}}
+\par
+{\bkmkstart AAAAAAAAHC}
+{\bkmkend AAAAAAAAHC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v BEARER_TOKEN\:penify_hook.api_client.APIClient}
+{\xe \v penify_hook.api_client.APIClient\:BEARER_TOKEN}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.api_client.APIClient.BEARER_TOKEN}}
+\par
+{\bkmkstart AAAAAAAAHD}
+{\bkmkend AAAAAAAAHD}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b api_client.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.base_analyzer.BaseAnalyzer Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer}
+{\bkmkstart AAAAAAAAHF}
+{\bkmkend AAAAAAAAHF}
+Inheritance diagram for penify_hook.base_analyzer.BaseAnalyzer:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.base_analyzer.BaseAnalyzer:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b folder_path}, {\b APIClient} {\b api_client})\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b folder_path}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b repo_path}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b repo}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b repo_details}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b relative_file_path}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b api_client}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b supported_file_types}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.base_analyzer.BaseAnalyzer.__init__ (  {\i self}, str  {\i folder_path}, {\b APIClient}  {\i api_client})}}
+\par
+{\bkmkstart AAAAAAAAHG}
+{\bkmkend AAAAAAAAHG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+\par
+{
+Reimplemented in {\b penify_hook.folder_analyzer.FolderAnalyzerGenHook} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHH \\*MERGEFORMAT}{\fldrslt pagenum}}}), {\b penify_hook.file_analyzer.FileAnalyzerGenHook} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHI \\*MERGEFORMAT}{\fldrslt pagenum}}}), {\b penify_hook.git_analyzer.GitDocGenHook} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHJ \\*MERGEFORMAT}{\fldrslt pagenum}}}), and {\b penify_hook.commit_analyzer.CommitDocGenHook} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHK \\*MERGEFORMAT}{\fldrslt pagenum}}}).}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v api_client\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:api_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.api_client}}
+\par
+{\bkmkstart AAAAAAAAHL}
+{\bkmkend AAAAAAAAHL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v folder_path\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:folder_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.folder_path}}
+\par
+{\bkmkstart AAAAAAAAHM}
+{\bkmkend AAAAAAAAHM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v relative_file_path\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:relative_file_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.relative_file_path}}
+\par
+{\bkmkstart AAAAAAAAHN}
+{\bkmkend AAAAAAAAHN}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v repo\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:repo}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.repo}}
+\par
+{\bkmkstart AAAAAAAAHO}
+{\bkmkend AAAAAAAAHO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v repo_details\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:repo_details}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.repo_details}}
+\par
+{\bkmkstart AAAAAAAAHP}
+{\bkmkend AAAAAAAAHP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v repo_path\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:repo_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.repo_path}}
+\par
+{\bkmkstart AAAAAAAAHQ}
+{\bkmkend AAAAAAAAHQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v supported_file_types\:penify_hook.base_analyzer.BaseAnalyzer}
+{\xe \v penify_hook.base_analyzer.BaseAnalyzer\:supported_file_types}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.base_analyzer.BaseAnalyzer.supported_file_types}}
+\par
+{\bkmkstart AAAAAAAAHR}
+{\bkmkend AAAAAAAAHR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b base_analyzer.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.commit_analyzer.CommitDocGenHook Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook}
+{\bkmkstart AAAAAAAAIY}
+{\bkmkend AAAAAAAAIY}
+Inheritance diagram for penify_hook.commit_analyzer.CommitDocGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.commit_analyzer.CommitDocGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b repo_path}, {\b APIClient} {\b api_client}, {\b llm_client}=None, jira_client=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+dict {\b get_summary} (self, str instruction, bool generate_description)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b run} (self, Optional[str] msg, bool edit_commit_message, bool generate_description)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+tuple {\b process_jira_integration} (self, str title, str description, str msg)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b llm_client}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Private Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b _amend_commit} (self)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commit_analyzer.CommitDocGenHook.__init__ (  {\i self}, str  {\i repo_path}, {\b APIClient}  {\i api_client},   {\i llm_client} = {\f2 None},   {\i jira_client} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAHK}
+{\bkmkend AAAAAAAAHK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+\par
+{
+Reimplemented from {\b penify_hook.base_analyzer.BaseAnalyzer} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHG \\*MERGEFORMAT}{\fldrslt pagenum}}}).}\par
+Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_af127d86729e226d74dbeb095b008db3e_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v _amend_commit\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:_amend_commit}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commit_analyzer.CommitDocGenHook._amend_commit (  {\i self}){\f2 [private]}}}
+\par
+{\bkmkstart AAAAAAAAIZ}
+{\bkmkend AAAAAAAAIZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Amends the last commit message in the repository.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_ac999c5cbc852a7ec3b412ccb43c274ca_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_summary\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:get_summary}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ dict penify_hook.commit_analyzer.CommitDocGenHook.get_summary (  {\i self}, str  {\i instruction}, bool  {\i generate_description})}}
+\par
+{\bkmkstart AAAAAAAAJA}
+{\bkmkend AAAAAAAAJA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generate a summary for the commit based on the staged changes.\par
+\par
+This function retrieves the differences of the staged changes in the repository\par
+and generates a commit summary using the provided instruction. If there are no\par
+changes staged for commit, an exception is raised. If a JIRA client is\par
+connected, it will attempt to extract issue keys from the current branch and\par
+use them to fetch context. The summary can be generated either with a Language\par
+Model (LLM) client or through the API client.\par
+\par
+Args:\par
+    instruction (str): A string containing instructions for generating the commit summary.\par
+    generate_description (bool): Whether to include detailed descriptions in the summary.\par
+\par
+Raises:\par
+    ValueError: If there are no changes staged for commit.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a8496194276441fa2eb2fa014eaab9a37_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v process_jira_integration\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:process_jira_integration}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ tuple penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration (  {\i self}, str  {\i title}, str  {\i description}, str  {\i msg})}}
+\par
+{\bkmkstart AAAAAAAAJB}
+{\bkmkend AAAAAAAAJB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Process JIRA integration by extracting issue keys from commit message\par
+components and branch name.\par
+\par
+This function looks for JIRA issue keys in the provided commit title,\par
+description, original user message, and the active branch name. It uses these\par
+keys to update the commit message with JIRA information and adds comments to\par
+the corresponding JIRA issues. If no keys are found, it logs a warning.\par
+\par
+Args:\par
+    title (str): The generated commit title.\par
+    description (str): The generated commit description.\par
+    msg (str): The original user message that might contain JIRA references.\par
+\par
+Returns:\par
+    tuple: A tuple containing the updated commit title and description with included JIRA\par
+        information.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_adda13cc121d96342476ccf72b63a007f_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v run\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:run}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.commit_analyzer.CommitDocGenHook.run (  {\i self}, Optional[str]  {\i msg}, bool  {\i edit_commit_message}, bool  {\i generate_description})}}
+\par
+{\bkmkstart AAAAAAAAJC}
+{\bkmkend AAAAAAAAJC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Run the post-commit hook.\par
+\par
+This method processes the modified files from the last commit, stages them, and\par
+creates an auto-commit with an optional message. It also handles JIRA\par
+integration if available. If there is an error generating the commit summary,\par
+an exception is raised.\par
+\par
+Args:\par
+    msg (Optional[str]): An optional message to include in the commit.\par
+    edit_commit_message (bool): A flag indicating whether to open the git commit\par
+        edit terminal after committing.\par
+    generate_description (bool): A flag indicating whether to include a description\par
+        in the commit message.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_a6370a03f7ed9175ef6f81e931a105ea9_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v llm_client\:penify_hook.commit_analyzer.CommitDocGenHook}
+{\xe \v penify_hook.commit_analyzer.CommitDocGenHook\:llm_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.commit_analyzer.CommitDocGenHook.llm_client}}
+\par
+{\bkmkstart AAAAAAAAJD}
+{\bkmkend AAAAAAAAJD}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b commit_analyzer.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+Exception Class Reference\par \pard\plain 
+{\tc\tcl2 \v Exception}
+{\xe \v Exception}
+{\bkmkstart AAAAAAAAGR}
+{\bkmkend AAAAAAAAGR}
+Inheritance diagram for Exception:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classException__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for Exception:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classException__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b utils.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.file_analyzer.FileAnalyzerGenHook Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\bkmkstart AAAAAAAAJM}
+{\bkmkend AAAAAAAAJM}
+Inheritance diagram for penify_hook.file_analyzer.FileAnalyzerGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.file_analyzer.FileAnalyzerGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b file_path}, {\b APIClient} {\b api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b process_file} (self, {\b file_path}, pbar, str new_param="")\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b print_processing} (self, {\b file_path})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b run} (self)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b file_path}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.file_analyzer.FileAnalyzerGenHook.__init__ (  {\i self}, str  {\i file_path}, {\b APIClient}  {\i api_client})}}
+\par
+{\bkmkstart AAAAAAAAHI}
+{\bkmkend AAAAAAAAHI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+\par
+{
+Reimplemented from {\b penify_hook.base_analyzer.BaseAnalyzer} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHG \\*MERGEFORMAT}{\fldrslt pagenum}}}).}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v print_processing\:penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook\:print_processing}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing (  {\i self},   {\i file_path})}}
+\par
+{\bkmkstart AAAAAAAAJN}
+{\bkmkend AAAAAAAAJN}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Prints a message indicating that a file is being processed.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a6ab39391dfb7686f2a2d21a702dd3073_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v process_file\:penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook\:process_file}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.file_analyzer.FileAnalyzerGenHook.process_file (  {\i self},   {\i file_path},   {\i pbar}, str   {\i new_param} = {\f2 ""})}}
+\par
+{\bkmkstart AAAAAAAAJO}
+{\bkmkend AAAAAAAAJO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Processes a file by validating its extension, reading content,\par
+generating documentation, and writing changes back to the file.  The function\par
+performs several stages of processing: 1. Validates the file's extension to\par
+ensure it is supported. 2. Reads the content of the file. 3. Sends the file\par
+content for documentation generation. 4. Writes the generated documentation\par
+back to the file if there are changes.\par
+\par
+Args:\par
+    file_path (str): The path of the file to be processed.\par
+    pbar (tqdm.tqdm): A progress bar object to update the status of processing stages.\par
+    new_param (str?): An additional parameter for future use. Defaults to an empty string.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a2cc6c22ef588fccf3eed9bbc57fb6d6e_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v run\:penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook\:run}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.file_analyzer.FileAnalyzerGenHook.run (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAJP}
+{\bkmkend AAAAAAAAJP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Runs the documentation process with a progress bar.\par
+\par
+This method orchestrates the documentation process by creating a progress bar,\par
+processing the file, and handling exceptions to ensure the progress bar\par
+completes properly. It updates the progress bar through various stages and\par
+provides feedback based on the result of the file processing.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_a4f4dffbc432fac3e259d957dd1e187f1_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v file_path\:penify_hook.file_analyzer.FileAnalyzerGenHook}
+{\xe \v penify_hook.file_analyzer.FileAnalyzerGenHook\:file_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.file_analyzer.FileAnalyzerGenHook.file_path}}
+\par
+{\bkmkstart AAAAAAAAJQ}
+{\bkmkend AAAAAAAAJQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b file_analyzer.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.folder_analyzer.FolderAnalyzerGenHook Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\xe \v penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\bkmkstart AAAAAAAAJS}
+{\bkmkend AAAAAAAAJS}
+Inheritance diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.folder_analyzer.FolderAnalyzerGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b dir_path}, {\b APIClient} {\b api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b list_all_files_in_dir} (self, str {\b dir_path})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b run} (self)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b dir_path}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\xe \v penify_hook.folder_analyzer.FolderAnalyzerGenHook\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__ (  {\i self}, str  {\i dir_path}, {\b APIClient}  {\i api_client})}}
+\par
+{\bkmkstart AAAAAAAAHH}
+{\bkmkend AAAAAAAAHH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+\par
+{
+Reimplemented from {\b penify_hook.base_analyzer.BaseAnalyzer} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHG \\*MERGEFORMAT}{\fldrslt pagenum}}}).}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v list_all_files_in_dir\:penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\xe \v penify_hook.folder_analyzer.FolderAnalyzerGenHook\:list_all_files_in_dir}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir (  {\i self}, str  {\i dir_path})}}
+\par
+{\bkmkstart AAAAAAAAJT}
+{\bkmkend AAAAAAAAJT}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid List all non-hidden files in a directory and its subdirectories.\par
+\par
+This function recursively traverses the specified directory and its\par
+subdirectories, collecting paths of all non-hidden files. It filters out hidden\par
+directories and files (those starting with a dot) to ensure only visible files\par
+are returned.\par
+\par
+Args:\par
+    dir_path (str): The path to the directory whose files and subdirectory files need to be listed.\par
+}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_a70b845318fc7ac3b607daf26378e19ec_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v run\:penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\xe \v penify_hook.folder_analyzer.FolderAnalyzerGenHook\:run}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.folder_analyzer.FolderAnalyzerGenHook.run (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAJU}
+{\bkmkend AAAAAAAAJU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Run the post-commit hook and process files with a progress bar.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_afd189d1b8c773bf710a899eb21fd76cc_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v dir_path\:penify_hook.folder_analyzer.FolderAnalyzerGenHook}
+{\xe \v penify_hook.folder_analyzer.FolderAnalyzerGenHook\:dir_path}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path}}
+\par
+{\bkmkstart AAAAAAAAJV}
+{\bkmkend AAAAAAAAJV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b folder_analyzer.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.git_analyzer.GitDocGenHook Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook}
+{\bkmkstart AAAAAAAAJY}
+{\bkmkend AAAAAAAAJY}
+Inheritance diagram for penify_hook.git_analyzer.GitDocGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.git_analyzer.GitDocGenHook:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b repo_path}, {\b APIClient} {\b api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b get_modified_files_in_last_commit} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b get_modified_lines} (self, diff_text)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b process_file} (self, file_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b run} (self)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Additional Inherited Members\par
+\pard\plain 
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.git_analyzer.GitDocGenHook.__init__ (  {\i self}, str  {\i repo_path}, {\b APIClient}  {\i api_client})}}
+\par
+{\bkmkstart AAAAAAAAHJ}
+{\bkmkend AAAAAAAAHJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+\par
+{
+Reimplemented from {\b penify_hook.base_analyzer.BaseAnalyzer} ({\i p.{\field\fldedit {\*\fldinst PAGEREF AAAAAAAAHG \\*MERGEFORMAT}{\fldrslt pagenum}}}).}\par
+Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a92275fddb43dbef6dfdb6c1ed6e96d0c_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v get_modified_files_in_last_commit\:penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook\:get_modified_files_in_last_commit}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAJZ}
+{\bkmkend AAAAAAAAJZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Get the list of files modified in the last commit.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a17549766100e91eb94b5f1a1d34bf481_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_modified_lines\:penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook\:get_modified_lines}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.git_analyzer.GitDocGenHook.get_modified_lines (  {\i self},   {\i diff_text})}}
+\par
+{\bkmkstart AAAAAAAAKA}
+{\bkmkend AAAAAAAAKA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Extract modified line numbers from a diff text.\par
+\par
+This function processes a diff text to identify and extract the line numbers\par
+that have been modified. It distinguishes between added and deleted lines and\par
+keeps track of the current line number as it parses through the diff. The\par
+function handles hunk headers and ensures that any deletions at the end of the\par
+file are also captured.\par
+\par
+Args:\par
+    diff_text (str): A string containing the diff text to be processed.\par
+}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a974d2f51315ed6a1965a7fd7e2ced0cd_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v process_file\:penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook\:process_file}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.git_analyzer.GitDocGenHook.process_file (  {\i self},   {\i file_path})}}
+\par
+{\bkmkstart AAAAAAAAKB}
+{\bkmkend AAAAAAAAKB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Processes a file by checking its type, reading its content, and sending it to\par
+an API.\par
+\par
+This method constructs the absolute path of the specified file and verifies if\par
+the file has a valid extension. If the file type is supported, it reads the\par
+content of the file and retrieves the differences from the last commit in the\par
+repository. If changes are detected, it sends the file content along with the\par
+modified lines to an API for further processing. If the API response indicates\par
+no changes, the original file will not be overwritten.\par
+\par
+Args:\par
+    file_path (str): The relative path to the file to be processed.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a05313caa22b173ce75638f0db08eeb85_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v run\:penify_hook.git_analyzer.GitDocGenHook}
+{\xe \v penify_hook.git_analyzer.GitDocGenHook\:run}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.git_analyzer.GitDocGenHook.run (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAKC}
+{\bkmkend AAAAAAAAKC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Run the post-commit hook.\par
+\par
+This method retrieves the list of modified files from the last commit and\par
+processes each file. It stages any files that have been modified during\par
+processing and creates an auto-commit if changes were made. A progress bar is\par
+displayed to indicate the processing status of each file. The method handles\par
+any exceptions that occur during file processing, printing an error message for\par
+each file that fails to process. If any modifications are made to the files, an\par
+auto-commit is created to save those changes.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_a3beba14e92d717391a74bb70b1fab0ae_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b git_analyzer.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.utils.GitRepoNotFoundError Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.utils.GitRepoNotFoundError}
+{\xe \v penify_hook.utils.GitRepoNotFoundError}
+{\bkmkstart AAAAAAAAMN}
+{\bkmkend AAAAAAAAMN}
+Inheritance diagram for penify_hook.utils.GitRepoNotFoundError:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1utils_1_1GitRepoNotFoundError__inherit__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+Collaboration diagram for penify_hook.utils.GitRepoNotFoundError:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1utils_1_1GitRepoNotFoundError__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b utils.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.jira_client.JiraClient Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient}
+{\bkmkstart AAAAAAAAKF}
+{\bkmkend AAAAAAAAKF}
+Collaboration diagram for penify_hook.jira_client.JiraClient:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b jira_url}=None, str {\b jira_user}=None, str {\b jira_api_token}=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b is_connected} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+List[str] {\b extract_issue_keys_from_branch} (self, str branch_name)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+List[str] {\b extract_issue_keys} (self, str text)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Optional[Dict[str, Any]] {\b get_issue_details} (self, str issue_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b add_comment} (self, str issue_key, str comment)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b update_issue_status} (self, str issue_key, str transition_name)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+tuple {\b format_commit_message_with_jira_info} (self, str commit_title, str commit_description, List[str] issue_keys=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, Any] {\b get_detailed_issue_context} (self, str issue_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, Any] {\b get_commit_context_from_issues} (self, List[str] issue_keys)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+tuple {\b enhance_commit_message} (self, str title, str description, List[str] issue_keys)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b jira_url}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b jira_user}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b jira_api_token}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b jira_client}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Detailed Description\par
+\pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Client for interacting with JIRA API\par
+}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.jira_client.JiraClient.__init__ (  {\i self}, str   {\i jira_url} = {\f2 None}, str   {\i jira_user} = {\f2 None}, str   {\i jira_api_token} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAKG}
+{\bkmkend AAAAAAAAKG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Initialize the JIRA client.\par
+\par
+Args:\par
+    jira_url: Base URL for JIRA instance (e.g., "https://your-domain.atlassian.net")\par
+    jira_user: JIRA username or email\par
+    jira_api_token: JIRA API token\par
+}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v add_comment\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:add_comment}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ bool penify_hook.jira_client.JiraClient.add_comment (  {\i self}, str  {\i issue_key}, str  {\i comment})}}
+\par
+{\bkmkstart AAAAAAAAKH}
+{\bkmkend AAAAAAAAKH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Adds a comment to a JIRA issue.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_aa1f374116c64cd5f1492ec7f7e40f9c1_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v enhance_commit_message\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:enhance_commit_message}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ tuple penify_hook.jira_client.JiraClient.enhance_commit_message (  {\i self}, str  {\i title}, str  {\i description}, List[str]  {\i issue_keys})}}
+\par
+{\bkmkstart AAAAAAAAKI}
+{\bkmkend AAAAAAAAKI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Enhance a commit message with business and technical context from JIRA issues.\par
+\par
+This function first checks if the list of issue keys is empty or if there is no\par
+connection. If so, it returns the original title and description without\par
+modification. It then retrieves context information from the specified JIRA\par
+issues. If the primary issue is missing, it formats the commit message with\par
+basic JIRA info.  The function enhances the commit title by prefixing it with\par
+the primary issue key if not already included. It appends a business context\par
+section to the description, including details like issue type, status,\par
+priority, sprint, acceptance criteria, and a condensed issue description. If\par
+comments are available, they are added as technical notes. Finally, related\par
+issues are listed.\par
+\par
+Args:\par
+    title (str): Original commit title.\par
+    description (str): Original commit description.\par
+    issue_keys (List[str]): List of JIRA issue keys to include in the enhanced commit message.\par
+\par
+Returns:\par
+    tuple: A tuple containing the enhanced commit title and description with added\par
+        context from JIRA issues.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a70d2c5a6432aa6f238da0ff65d49a760_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v extract_issue_keys\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:extract_issue_keys}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ List[str] penify_hook.jira_client.JiraClient.extract_issue_keys (  {\i self}, str  {\i text})}}
+\par
+{\bkmkstart AAAAAAAAKJ}
+{\bkmkend AAAAAAAAKJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Extract unique JIRA issue keys from the given text.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_ad2823ad1d3baaedd38039913c3a97fd7_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v extract_issue_keys_from_branch\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:extract_issue_keys_from_branch}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ List[str] penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch (  {\i self}, str  {\i branch_name})}}
+\par
+{\bkmkstart AAAAAAAAKK}
+{\bkmkend AAAAAAAAKK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Extracts unique JIRA issue keys from a branch name.}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a093d6456fe053ef7a7862d5d6851910c_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v format_commit_message_with_jira_info\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:format_commit_message_with_jira_info}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ tuple penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info (  {\i self}, str  {\i commit_title}, str  {\i commit_description}, List[str]   {\i issue_keys} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAKL}
+{\bkmkend AAAAAAAAKL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Format commit message with JIRA issue information.\par
+\par
+This function updates the provided commit title and description by\par
+incorporating JIRA issue keys. If no issue keys are supplied, it extracts them\par
+from the commit title and description. It then formats the commit title to\par
+include the first issue key if not already present and appends detailed\par
+information about each issue to the commit description.\par
+\par
+Args:\par
+    commit_title (str): The original commit title.\par
+    commit_description (str): The original commit description.\par
+    issue_keys (List[str]?): A list of JIRA issue keys to include in the commit message. If not\par
+        provided, issue keys will be extracted from both the title and the description.\par
+\par
+Returns:\par
+    tuple: A tuple containing the updated commit title and description with JIRA\par
+        information included.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a49ea1149758f7f5212149d357b13cc23_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_commit_context_from_issues\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:get_commit_context_from_issues}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Dict[str, Any] penify_hook.jira_client.JiraClient.get_commit_context_from_issues (  {\i self}, List[str]  {\i issue_keys})}}
+\par
+{\bkmkstart AAAAAAAAKM}
+{\bkmkend AAAAAAAAKM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Gather contextual information from JIRA issues to improve commit messages.\par
+\par
+This function processes a list of JIRA issue keys, retrieves detailed context\par
+for each issue, and aggregates it into a dictionary that can be used to enhance\par
+commit messages. It first retrieves the primary issue (the first key in the\par
+list) and then gathers basic details for any related issues. The resulting\par
+context includes information from both the primary and related issues, along\par
+with all issue keys.\par
+\par
+Args:\par
+    issue_keys: List of JIRA issue keys to gather information from\par
+\par
+Returns:\par
+    Dict containing business and technical context from the issues\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_afb41ce6f13c30b1265d439ddf04bf2cd_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_detailed_issue_context\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:get_detailed_issue_context}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Dict[str, Any] penify_hook.jira_client.JiraClient.get_detailed_issue_context (  {\i self}, str  {\i issue_key})}}
+\par
+{\bkmkstart AAAAAAAAKN}
+{\bkmkend AAAAAAAAKN}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieve comprehensive details about a JIRA issue including context for better\par
+commit messages.\par
+\par
+This function fetches detailed information from a specified JIRA issue and\par
+constructs a dictionary containing various context fields such as the issue\par
+summary, description, type, status, priority, comments, URL, and additional\par
+custom fields like acceptance criteria and sprint information. It handles\par
+errors by logging appropriate warnings or errors.\par
+\par
+Args:\par
+    issue_key (str): The JIRA issue key (e.g., "PROJECT-123").\par
+\par
+Returns:\par
+    Dict[str, Any]: A dictionary containing business and technical context from the issue.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_aa967169a4b7970c67c0947b9ac56f746_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v get_issue_details\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:get_issue_details}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Optional[Dict[str, Any]] penify_hook.jira_client.JiraClient.get_issue_details (  {\i self}, str  {\i issue_key})}}
+\par
+{\bkmkstart AAAAAAAAKO}
+{\bkmkend AAAAAAAAKO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Retrieve details of a JIRA issue based on its key.\par
+\par
+This function fetches detailed information about a specified JIRA issue using\par
+the provided issue key. It first checks if the JIRA client is connected; if\par
+not, it logs a warning and returns `None`. If connected, it attempts to\par
+retrieve the issue from the JIRA server. On success, it constructs and returns\par
+a dictionary containing various details such as the issue's key, summary,\par
+status, description, assignee, reporter, type, priority, and URL. Errors during\par
+this process are logged, and `None` is returned.\par
+\par
+Args:\par
+    issue_key (str): The JIRA issue key (e.g., "PROJECT-123").\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a65f6924819084b7c8d268956a784804a_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v is_connected\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:is_connected}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ bool penify_hook.jira_client.JiraClient.is_connected (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAKP}
+{\bkmkend AAAAAAAAKP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Check if the JIRA client is connected.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_a00d0f9ae006313a21576362d26ac5ec8_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v update_issue_status\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:update_issue_status}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ bool penify_hook.jira_client.JiraClient.update_issue_status (  {\i self}, str  {\i issue_key}, str  {\i transition_name})}}
+\par
+{\bkmkstart AAAAAAAAKQ}
+{\bkmkend AAAAAAAAKQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Update the status of a JIRA issue.\par
+\par
+This method checks if the JIRA client is connected, retrieves available\par
+transitions for the given issue, finds the transition ID by name, and updates\par
+the issue's status accordingly. If any step fails or the specified transition\par
+is not found, appropriate logs are generated, and False is returned.\par
+\par
+Args:\par
+    issue_key (str): The key of the JIRA issue to be updated.\par
+    transition_name (str): The name of the desired transition.\par
+\par
+Returns:\par
+    bool: True if the status was successfully updated, False otherwise.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1jira__client_1_1JiraClient_aca8837552d37bfd611de23441a240826_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v jira_api_token\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:jira_api_token}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.jira_client.JiraClient.jira_api_token}}
+\par
+{\bkmkstart AAAAAAAAKR}
+{\bkmkend AAAAAAAAKR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v jira_client\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:jira_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.jira_client.JiraClient.jira_client}}
+\par
+{\bkmkstart AAAAAAAAKS}
+{\bkmkend AAAAAAAAKS}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v jira_url\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:jira_url}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.jira_client.JiraClient.jira_url}}
+\par
+{\bkmkstart AAAAAAAAKT}
+{\bkmkend AAAAAAAAKT}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v jira_user\:penify_hook.jira_client.JiraClient}
+{\xe \v penify_hook.jira_client.JiraClient\:jira_user}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.jira_client.JiraClient.jira_user}}
+\par
+{\bkmkstart AAAAAAAAKU}
+{\bkmkend AAAAAAAAKU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b jira_client.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+penify_hook.llm_client.LLMClient Class Reference\par \pard\plain 
+{\tc\tcl2 \v penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient}
+{\bkmkstart AAAAAAAAKW}
+{\bkmkend AAAAAAAAKW}
+Collaboration diagram for penify_hook.llm_client.LLMClient:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1llm__client_1_1LLMClient__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b __init__} (self, str {\b model}=None, str api_base=None, str api_key=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b litellm} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict {\b generate_commit_summary} (self, str diff, str message, bool generate_description, Dict repo_details, Dict jira_context=None)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b model}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Private Attributes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b _litellm}\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Detailed Description\par
+\pard\plain 
+{
+\pard\plain \s17\sa60\sb30\widctlpar\qj \fs22\cgrid {\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s40\li0\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Client for interacting with LLM models using LiteLLM.\par
+}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Constructor & Destructor Documentation\par
+\pard\plain 
+{\xe \v __init__\:penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient\:__init__}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.llm_client.LLMClient.__init__ (  {\i self}, str   {\i model} = {\f2 None}, str   {\i api_base} = {\f2 None}, str   {\i api_key} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAKX}
+{\bkmkend AAAAAAAAKX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Initialize the LLM client.\par
+\par
+Args:\par
+    model: LLM model to use (e.g., "gpt-4", "ollama/llama2", etc.)\par
+    api_base: Base URL for API requests (e.g., "http://localhost:11434" for Ollama)\par
+    api_key: API key for the LLM service\par
+}
+ \par
+}}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v generate_commit_summary\:penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient\:generate_commit_summary}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+ Dict penify_hook.llm_client.LLMClient.generate_commit_summary (  {\i self}, str  {\i diff}, str  {\i message}, bool  {\i generate_description}, Dict  {\i repo_details}, Dict   {\i jira_context} = {\f2 None})}}
+\par
+{\bkmkstart AAAAAAAAKY}
+{\bkmkend AAAAAAAAKY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Generate a concise and descriptive commit summary based on Git diff, user\par
+instructions, repository details, and optional JIRA context.\par
+\par
+This function constructs a prompt for an LLM to produce a commit title and, if\par
+requested, a detailed description. The summary adheres to Semantic Commit\par
+Messages guidelines. If JIRA context is provided, it enriches the prompt with\par
+relevant issue information.\par
+\par
+Args:\par
+    diff (str): Git diff of changes.\par
+    message (str): User-provided commit message or instructions.\par
+    generate_description (bool): Flag indicating whether to include a detailed description in the summary.\par
+    repo_details (Dict): Details about the repository.\par
+    jira_context (Dict?): Optional JIRA issue context to enhance the summary.\par
+\par
+Returns:\par
+    Dict: A dictionary containing the title and description for the commit. If\par
+        `generate_description` is False, the 'description' key may be absent.\par
+\par
+Raises:\par
+    ValueError: If the LLM model is not configured.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1llm__client_1_1LLMClient_a2ad3014dac466ee1d8e00306d0cf2000_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v litellm\:penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient\:litellm}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def penify_hook.llm_client.LLMClient.litellm (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAAKZ}
+{\bkmkend AAAAAAAAKZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Returns the litellm module, loading it if necessary.}
+ \par
+}Here is the caller graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classpenify__hook_1_1llm__client_1_1LLMClient_ad6f06658ca922793f879474f2234518e_icgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Data Documentation\par
+\pard\plain 
+{\xe \v _litellm\:penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient\:_litellm}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.llm_client.LLMClient._litellm{\f2 [private]}}}
+\par
+{\bkmkstart AAAAAAAALA}
+{\bkmkend AAAAAAAALA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\xe \v model\:penify_hook.llm_client.LLMClient}
+{\xe \v penify_hook.llm_client.LLMClient\:model}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+penify_hook.llm_client.LLMClient.model}}
+\par
+{\bkmkstart AAAAAAAALB}
+{\bkmkend AAAAAAAALB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/{\b llm_client.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_commit_commands.TestCommitCommands Class Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands}
+{\bkmkstart AAAAAAAANF}
+{\bkmkend AAAAAAAANF}
+Collaboration diagram for tests.test_commit_commands.TestCommitCommands:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_api_client} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_llm_client} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_jira_client} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_commit_doc_gen} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_git_folder_search} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b mock_print_functions} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_commit_code_with_llm_client} (self, mock_error, mock_warning, mock_info, {\b mock_git_folder_search}, mock_doc_gen, {\b mock_llm_client}, {\b mock_api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_commit_code_with_jira_client} (self, mock_error, mock_warning, mock_info, {\b mock_git_folder_search}, mock_doc_gen, {\b mock_jira_client}, {\b mock_llm_client}, {\b mock_api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_commit_code_with_jira_connection_failure} (self, mock_error, mock_warning, mock_info, {\b mock_git_folder_search}, mock_doc_gen, {\b mock_jira_client}, {\b mock_api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_commit_code_error_handling} (self, mock_print, mock_exit, {\b mock_git_folder_search}, mock_doc_gen, {\b mock_api_client})\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_setup_commit_parser} (self)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_handle_commit} (self, mock_print_info, mock_commit_code, mock_get_token, mock_get_llm_config, mock_get_jira_config)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v mock_api_client\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_api_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_api_client (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANG}
+{\bkmkend AAAAAAAANG}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Mocks an instance of APIClient using unittest.mock.\par
+\par
+This function creates a mock object for APIClient and yields it along\par
+with the mocked instance. It is useful for testing purposes where real\par
+API calls should be avoided.\par
+\par
+Yields:\par
+    tuple: A tuple containing the mock of APIClient and the mocked instance of\par
+        APIClient.\par
+}
+ \par
+}}
+{\xe \v mock_commit_doc_gen\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_commit_doc_gen}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANH}
+{\bkmkend AAAAAAAANH}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Mocks the CommitDocGenHook class and returns a MagicMock instance.\par
+\par
+This function uses the `patch` decorator from the `unittest.mock` module\par
+to create a mock of the `CommitDocGenHook` class. It then sets up this\par
+mock to return a new `MagicMock` instance when invoked. The function\par
+yields both the mock object and the mocked instance, allowing for easy\par
+testing of functions that rely on `CommitDocGenHook`.\par
+\par
+Returns:\par
+    tuple: A tuple containing two elements:\par
+        - mock (patch): The patch object used to mock the `CommitDocGenHook`\par
+        class.\par
+        - doc_gen_instance (MagicMock): The mocked instance of\par
+        `CommitDocGenHook`.\par
+}
+ \par
+}}
+{\xe \v mock_git_folder_search\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_git_folder_search}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_git_folder_search (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANI}
+{\bkmkend AAAAAAAANI}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Mock the `recursive_search_git_folder` function to return a predefined\par
+git folder path.\par
+\par
+This function uses the `patch` decorator from the `unittest.mock` module\par
+to intercept calls to `penify_hook.utils.recursive_search_git_folder`.\par
+When called, it will return '/mock/git/folder' instead of performing an\par
+actual search. This is useful for testing purposes where you need a\par
+consistent response without interacting with the file system.\par
+\par
+Yields:\par
+    MagicMock: A mock object that simulates the `recursive_search_git_folder` function.\par
+}
+ \par
+}}
+{\xe \v mock_jira_client\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_jira_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_jira_client (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANJ}
+{\bkmkend AAAAAAAANJ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Create a mock JIRA client for testing purposes.\par
+\par
+This function yields a tuple containing a mock JIRA client instance and\par
+its `is_connected` method. The mock client is configured to simulate an\par
+active connection. This is useful for unit tests that require\par
+interaction with a JIRA client without making actual network calls.\par
+\par
+Yields:\par
+    tuple: A tuple containing the mocked JIRA client instance and its\par
+        `is_connected` method.\par
+}
+ \par
+}}
+{\xe \v mock_llm_client\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_llm_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_llm_client (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANK}
+{\bkmkend AAAAAAAANK}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Mock an instance of LLMClient for testing purposes.\par
+\par
+This function yields a mock object representing an instance of\par
+LLMClient, which can be used to simulate interactions with a language\par
+model during testing. The mock is patched to replace the actual\par
+LLMClient class from the penify_hook module.\par
+\par
+Yields:\par
+    tuple: A tuple containing two elements:\par
+        - mock (MagicMock): The mock object for LLMClient.\par
+        - llm_client_instance (MagicMock): An instance of the mocked LLMClient.\par
+}
+ \par
+}}
+{\xe \v mock_print_functions\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:mock_print_functions}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.mock_print_functions (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANL}
+{\bkmkend AAAAAAAANL}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Mocks the print functions from `penify_hook.ui_utils` for testing\par
+purposes.\par
+\par
+This function uses Python's `unittest.mock.patch` to replace the actual\par
+print functions (`print`, `print_warning`, and `print_error`) with mock\par
+objects. These mock objects can be used in tests to capture calls made\par
+to these print functions without actually printing anything.\par
+\par
+Yields:\par
+    tuple: A tuple containing three mock objects corresponding to `print_info`,\par
+        `print_warning`,\par
+        and `print_error`.\par
+}
+ \par
+}}
+{\xe \v test_commit_code_error_handling\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_commit_code_error_handling}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling (  {\i self},   {\i mock_print},   {\i mock_exit},   {\i mock_git_folder_search},   {\i mock_doc_gen},   {\i mock_api_client})}}
+\par
+{\bkmkstart AAAAAAAANM}
+{\bkmkend AAAAAAAANM}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the error handling in the test_commit_code function.\par
+\par
+This function sets up mocks to simulate exceptions and test the error\par
+handling of the commit_code function. It verifies that the function\par
+correctly prints an error message and exits with a status code of 1 when\par
+an exception occurs during documentation generation.\par
+\par
+Args:\par
+    mock_print (MagicMock): Mock for the print function, used to verify error message output.\par
+    mock_exit (MagicMock): Mock for the sys.exit function, used to verify exit behavior.\par
+    mock_git_folder_search (MagicMock): Mock for the git_folder_search function, returning a mock Git folder\par
+        path.\par
+    mock_doc_gen (MagicMock): Mock for the doc_gen function, simulating an exception during\par
+        documentation generation.\par
+    mock_api_client (MagicMock): Mock for the API client class, not directly used but referenced in the\par
+        function signature.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_a43c2ff3707124aa48e8eb581106b8691_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_commit_code_with_jira_client\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_commit_code_with_jira_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client (  {\i self},   {\i mock_error},   {\i mock_warning},   {\i mock_info},   {\i mock_git_folder_search},   {\i mock_doc_gen},   {\i mock_jira_client},   {\i mock_llm_client},   {\i mock_api_client})}}
+\par
+{\bkmkstart AAAAAAAANN}
+{\bkmkend AAAAAAAANN}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test committing code using a JIRA client.\par
+\par
+This function tests the commit_code function with various parameters,\par
+including API and JIRA credentials. It sets up mock objects for\par
+dependencies such as the JIRA client, LLM client, and doc generator to\par
+simulate the behavior of the real classes. The function then calls\par
+commit_code and verifies that the JIRA client and doc generator are\par
+called with the correct parameters.\par
+\par
+Args:\par
+    mock_error (MagicMock): A MagicMock object for simulating error logging.\par
+    mock_warning (MagicMock): A MagicMock object for simulating warning logging.\par
+    mock_info (MagicMock): A MagicMock object for simulating info logging.\par
+    mock_git_folder_search (MagicMock): A MagicMock object for simulating the git folder search function.\par
+    mock_doc_gen (MagicMock): A MagicMock object for simulating the doc generator function.\par
+    mock_jira_client (MagicMock): A MagicMock object for simulating the JIRA client class.\par
+    mock_llm_client (MagicMock): A MagicMock object for simulating the LLM client class.\par
+    mock_api_client (MagicMock): A MagicMock object for simulating the API client class.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_af9c09013055ec39ddde86b487aefcf8b_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_commit_code_with_jira_connection_failure\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_commit_code_with_jira_connection_failure}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure (  {\i self},   {\i mock_error},   {\i mock_warning},   {\i mock_info},   {\i mock_git_folder_search},   {\i mock_doc_gen},   {\i mock_jira_client},   {\i mock_api_client})}}
+\par
+{\bkmkstart AAAAAAAANO}
+{\bkmkend AAAAAAAANO}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the commit_code function when JIRA connection fails.\par
+\par
+This function tests the scenario where the JIRA connection fails during\par
+a code commit. It sets up various mocks to simulate different components\par
+of the system and then calls the `commit_code` function with specific\par
+parameters. The function is expected to handle the JIRA connection\par
+failure gracefully by logging an appropriate warning.\par
+\par
+Args:\par
+    mock_error (MagicMock): Mock for error logging.\par
+    mock_warning (MagicMock): Mock for warning logging.\par
+    mock_info (MagicMock): Mock for info logging.\par
+    mock_git_folder_search (MagicMock): Mock for searching the Git folder.\par
+    mock_doc_gen (MagicMock): Mock for generating documentation.\par
+    mock_jira_client (MagicMock): Mock for creating a JIRA client.\par
+    mock_api_client (MagicMock): Mock for creating an API client.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_acea0d934ee0f2b914b0b893736e8fe4e_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_commit_code_with_llm_client\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_commit_code_with_llm_client}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client (  {\i self},   {\i mock_error},   {\i mock_warning},   {\i mock_info},   {\i mock_git_folder_search},   {\i mock_doc_gen},   {\i mock_llm_client},   {\i mock_api_client})}}
+\par
+{\bkmkstart AAAAAAAANP}
+{\bkmkend AAAAAAAANP}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test committing code using an LLM client.\par
+\par
+This function sets up mock objects for various components and then calls\par
+the `commit_code` function with specified parameters. It verifies that\par
+the correct mocks are created and called with the appropriate arguments.\par
+\par
+Args:\par
+    mock_error (MagicMock): Mock object for error handling.\par
+    mock_warning (MagicMock): Mock object for warning logging.\par
+    mock_info (MagicMock): Mock object for info logging.\par
+    mock_git_folder_search (MagicMock): Mock object to simulate git folder search.\par
+    mock_doc_gen (MagicMock): Mock object for document generation.\par
+    mock_llm_client (MagicMock): Mock object for LLM client interaction.\par
+    mock_api_client (MagicMock): Mock object for API client interaction.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_acc4b1e4189792a3f7c11d2a745f479c0_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_handle_commit\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_handle_commit}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_handle_commit (  {\i self},   {\i mock_print_info},   {\i mock_commit_code},   {\i mock_get_token},   {\i mock_get_llm_config},   {\i mock_get_jira_config})}}
+\par
+{\bkmkstart AAAAAAAANQ}
+{\bkmkend AAAAAAAANQ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the handle_commit function with various mock objects.\par
+\par
+This function sets up mocks for retrieving LLM configuration, JIRA\par
+configuration, and commit code. It then creates an argument object and\par
+calls the handle_commit function. Finally, it verifies that the mock\par
+functions were called with the expected arguments.\par
+\par
+Args:\par
+    mock_print_info (MagicMock): Mock object for printing information.\par
+    mock_commit_code (MagicMock): Mock object for committing code.\par
+    mock_get_token (MagicMock): Mock object for retrieving API token.\par
+    mock_get_llm_config (MagicMock): Mock object for retrieving LLM configuration.\par
+    mock_get_jira_config (MagicMock): Mock object for retrieving JIRA configuration.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_ac13e368262340af98b30fd8ebdac6597_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_setup_commit_parser\:tests.test_commit_commands.TestCommitCommands}
+{\xe \v tests.test_commit_commands.TestCommitCommands\:test_setup_commit_parser}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser (  {\i self})}}
+\par
+{\bkmkstart AAAAAAAANR}
+{\bkmkend AAAAAAAANR}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Set up the argument parser for the commit command.\par
+\par
+This function configures an argument parser to handle various options\par
+for committing changes. It adds three arguments: - '-m' or '--message':\par
+An optional argument to specify a contextual commit message with a\par
+default value of "N/A". - '-e' or '--terminal': A boolean flag to open\par
+an edit terminal before committing. - '-d' or '--description': A boolean\par
+flag that, when set to False, indicates the generation of a commit\par
+message with title and description.\par
+\par
+Args:\par
+    parser (MagicMock): The argument parser to be configured.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__commit__commands_1_1TestCommitCommands_a4d04b125e102190a768f65f1948f15bc_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_commit_commands.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_config_commands.TestConfigCommands Class Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands}
+{\bkmkstart AAAAAAAANT}
+{\bkmkend AAAAAAAANT}
+Collaboration diagram for tests.test_config_commands.TestConfigCommands:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_penify_config_existing_dir} (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_penify_config_new_dir} (self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_llm_config_exists} (self, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_llm_config_empty} (self, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_llm_config_invalid_json} (self, mock_print, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_jira_config_exists} (self, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_save_llm_config_success} (self, mock_print, mock_json_dump, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_save_llm_config_failure} (self, mock_print, mock_file_open, mock_get_config)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_save_jira_config_success} (self, mock_print, mock_json_dump, mock_file_open, mock_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_token_from_env} (self, mock_file_open, mock_path, mock_getenv)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_token_from_config} (self, mock_file_open, mock_path, mock_getenv)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_get_token_not_found} (self, mock_file_open, mock_path, mock_getenv)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v test_get_jira_config_exists\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_jira_config_exists}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists (  {\i self},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAANU}
+{\bkmkend AAAAAAAANU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test that get_jira_config returns the correct JIRA configuration when\par
+the configuration file exists.\par
+\par
+It sets up a mock for the configuration file to simulate its existence\par
+and verifies that the function reads from the correct file and returns\par
+the expected JIRA configuration dictionary. Additionally, it checks that\par
+the mock file open is called with the appropriate arguments.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A mock for the `open` function.\par
+    mock_get_config (MagicMock): A mock for the `get_config` function, which is expected to return a mock\par
+        configuration file object.\par
+\par
+Returns:\par
+    None: This test function does not explicitly return anything. Its assertions\par
+        serve as the verification of its correctness.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_aee37b97432821d19758c6325d4c74bcf_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_llm_config_empty\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_llm_config_empty}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty (  {\i self},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAANV}
+{\bkmkend AAAAAAAANV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the behavior of get_llm_config when called with an empty\par
+configuration file.\par
+\par
+This function sets up a mock configuration file that exists but returns\par
+no content. It then calls the `get_llm_config` function and asserts that\par
+it returns an empty dictionary and that the file open method was called\par
+exactly once with the correct arguments.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A MagicMock object simulating the built-in open function.\par
+    mock_get_config (MagicMock): A MagicMock object simulating the get_config function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_abd12f028b89aa9cd1152c0b9ece5d3cd_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_llm_config_exists\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_llm_config_exists}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists (  {\i self},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAANW}
+{\bkmkend AAAAAAAANW}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the get_llm_config function when the configuration file exists.\par
+\par
+This function sets up a mock configuration file that exists and returns\par
+it when called. It then calls the get_llm_config function and asserts\par
+that it returns the correct configuration dictionary. Additionally, it\par
+checks that the mock_file_open function was called with the correct\par
+arguments.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A mock for the open() function.\par
+    mock_get_config (MagicMock): A mock for the get_config() function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_adf9f2233a3f4cc5725b9d4f05758b167_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_llm_config_invalid_json\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_llm_config_invalid_json}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json (  {\i self},   {\i mock_print},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAANX}
+{\bkmkend AAAAAAAANX}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test function to verify the behavior of get_llm_config when reading an\par
+invalid JSON file.\par
+\par
+It sets up a mock configuration file that exists but contains invalid\par
+JSON. The function is expected to handle this gracefully by printing an\par
+error message and returning an empty dictionary.\par
+\par
+Args:\par
+    mock_print (MagicMock): Mock for the print function.\par
+    mock_file_open (MagicMock): Mock for the open function.\par
+    mock_get_config (MagicMock): Mock for the get_config function, which returns the mock configuration\par
+        file.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a473984d31452b56acd6ce4011a1248bd_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_penify_config_existing_dir\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_penify_config_existing_dir}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir (  {\i self},   {\i mock_file_open},   {\i mock_makedirs},   {\i mock_path},   {\i mock_git_folder})}}
+\par
+{\bkmkstart AAAAAAAANY}
+{\bkmkend AAAAAAAANY}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the get_penify_config function when the .penify config directory\par
+exists.\par
+\par
+It should not create a new directory and assert that all mocked\par
+functions were called correctly.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A MagicMock object simulating the open() function.\par
+    mock_makedirs (MagicMock): A MagicMock object simulating the os.makedirs() function.\par
+    mock_path (MagicMock): A MagicMock object simulating the Path class from pathlib module.\par
+    mock_git_folder (MagicMock): A MagicMock object simulating the git_folder_search() function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a2e8162082bcdd5652bb37bdb14cf453a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_penify_config_new_dir\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_penify_config_new_dir}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir (  {\i self},   {\i mock_file_open},   {\i mock_makedirs},   {\i mock_path},   {\i mock_git_folder})}}
+\par
+{\bkmkstart AAAAAAAANZ}
+{\bkmkend AAAAAAAANZ}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the behavior of get_penify_config when the .penify directory does\par
+not exist.\par
+\par
+This function mocks various system calls to simulate a scenario where\par
+the .penify directory is not present. It then asserts that the\par
+appropriate actions are taken to create the directory and write an empty\par
+JSON file.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A MagicMock object simulating the `open` function.\par
+    mock_makedirs (MagicMock): A MagicMock object simulating the `os.makedirs` function.\par
+    mock_path (MagicMock): A MagicMock object simulating the `Path` class from `pathlib`.\par
+    mock_git_folder (MagicMock): A MagicMock object simulating a git folder search function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a33d4760eee3b67e1cde3aed755ebb948_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_token_from_config\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_token_from_config}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_token_from_config (  {\i self},   {\i mock_file_open},   {\i mock_path},   {\i mock_getenv})}}
+\par
+{\bkmkstart AAAAAAAAOA}
+{\bkmkend AAAAAAAAOA}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test retrieving a token from the configuration.\par
+\par
+This function sets up mocks for environment variables and configuration\par
+files, calls the `get_token` function, and asserts its behavior. It\par
+verifies that when the environment variable is not found, the function\par
+reads a token from a configuration file located in the user's home\par
+directory.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A mock for the `open` function.\par
+    mock_path (MagicMock): A mock for the `pathlib.Path` class.\par
+    mock_getenv (MagicMock): A mock for the `os.getenv` function.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a6c0207be563c3de59a6d16277805114c_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_token_from_env\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_token_from_env}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_token_from_env (  {\i self},   {\i mock_file_open},   {\i mock_path},   {\i mock_getenv})}}
+\par
+{\bkmkstart AAAAAAAAOB}
+{\bkmkend AAAAAAAAOB}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test retrieving a token from the environment variable.\par
+\par
+This function tests the behavior of `get_token` when an environment\par
+variable is set. It verifies that if the 'PENIFY_API_TOKEN' environment\par
+variable exists, the function returns its value without attempting to\par
+read a file.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): A MagicMock object for simulating file operations.\par
+    mock_path (MagicMock): A MagicMock object for simulating path operations.\par
+    mock_getenv (MagicMock): A MagicMock object for simulating environment variable retrieval.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a3355f7d313bebaa71694387cf2bc5232_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_get_token_not_found\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_get_token_not_found}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_get_token_not_found (  {\i self},   {\i mock_file_open},   {\i mock_path},   {\i mock_getenv})}}
+\par
+{\bkmkstart AAAAAAAAOC}
+{\bkmkend AAAAAAAAOC}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the get_token function when the API token environment variable is\par
+not found.\par
+\par
+This function tests the scenario where the `PENIFY_API_TOKEN`\par
+environment variable is not set. It mocks the environment variable to\par
+return `None`, and verifies that the function returns `None`. The test\par
+also checks that the environment variable is accessed once and that a\par
+file open operation is attempted on a configuration file located in the\par
+user's home directory.\par
+\par
+Args:\par
+    mock_file_open (MagicMock): Mock for the built-in `open` function.\par
+    mock_path (MagicMock): Mock for the `pathlib.Path` module.\par
+    mock_getenv (MagicMock): Mock for the `os.getenv` function.\par
+\par
+Returns:\par
+    None: The function does not return anything; it asserts conditions to verify\par
+        correctness.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a400ca5d9fcdc159714e8df54920f9436_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_save_jira_config_success\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_save_jira_config_success}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_save_jira_config_success (  {\i self},   {\i mock_print},   {\i mock_json_dump},   {\i mock_file_open},   {\i mock_path})}}
+\par
+{\bkmkstart AAAAAAAAOD}
+{\bkmkend AAAAAAAAOD}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the save_jira_config function to ensure it saves JIRA configuration\par
+successfully.\par
+\par
+This function sets up mocks for various dependencies and tests the\par
+functionality of saving a JIRA configuration. It asserts that the\par
+function returns `True`, the JSON dump is called with the correct\par
+configuration, and the print statement contains the expected message.\par
+\par
+Args:\par
+    mock_print (MagicMock): Mock for the print function.\par
+    mock_json_dump (MagicMock): Mock for the json.dump function.\par
+    mock_file_open (MagicMock): Mock for the open function.\par
+    mock_path (MagicMock): Mock for the path module.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_af8d62310da2d768e21770f8f01ff5375_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_save_llm_config_failure\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_save_llm_config_failure}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure (  {\i self},   {\i mock_print},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAAOE}
+{\bkmkend AAAAAAAAOE}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test function to verify that the save_llm_config function returns False\par
+and prints an error message when it fails to save the LLM configuration\par
+due to a permission error.\par
+\par
+It sets up a mock configuration file that exists and calls the\par
+save_llm_config function with valid parameters. The function is expected\par
+to return False and print "Error saving LLM configuration: Permission\par
+denied" in case of a failure.\par
+\par
+Args:\par
+    self (TestLLMConfig): An instance of the test class.\par
+    mock_print (MagicMock): A MagicMock object representing the print function, which will be used\par
+        to assert that it was called with the expected error message.\par
+    mock_file_open (MagicMock): A MagicMock object representing the open function, which is not used in\par
+        this test but is included as a parameter for completeness.\par
+    mock_get_config (MagicMock): A MagicMock object representing the get_config function, which will be\par
+        used to return the mock configuration file.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_a73a264dfb21e16003e095b79f6eab2ac_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_save_llm_config_success\:tests.test_config_commands.TestConfigCommands}
+{\xe \v tests.test_config_commands.TestConfigCommands\:test_save_llm_config_success}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_config_commands.TestConfigCommands.test_save_llm_config_success (  {\i self},   {\i mock_print},   {\i mock_json_dump},   {\i mock_file_open},   {\i mock_get_config})}}
+\par
+{\bkmkstart AAAAAAAAOF}
+{\bkmkend AAAAAAAAOF}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the save_llm_config function successfully.\par
+\par
+This function tests that the save_llm_config function correctly saves an\par
+LLM configuration and handles various mock objects and side effects. It\par
+ensures that the function returns True upon successful execution, writes\par
+the expected configuration to a file, and prints a confirmation message.\par
+\par
+Args:\par
+    mock_print (MagicMock): A mock object for the print function.\par
+    mock_json_dump (MagicMock): A mock object for json.dump.\par
+    mock_file_open (MagicMock): A mock object for file opening.\par
+    mock_get_config (MagicMock): A mock object to return a configuration file mock.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__config__commands_1_1TestConfigCommands_acd8df8219441b9e9871b903a681400d9_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_config_commands.py}\par
+}\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+tests.test_web_config.TestWebConfig Class Reference\par \pard\plain 
+{\tc\tcl2 \v tests.test_web_config.TestWebConfig}
+{\xe \v tests.test_web_config.TestWebConfig}
+{\bkmkstart AAAAAAAAOT}
+{\bkmkend AAAAAAAAOT}
+Collaboration diagram for tests.test_web_config.TestWebConfig:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__web__config_1_1TestWebConfig__coll__graph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+\par
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Public Member Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_config_llm_web_server_setup} (self, mock_resource_filename, mock_server, mock_webbrowser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b test_config_jira_web_server_setup} (self, mock_resource_filename, mock_server, mock_webbrowser)\par
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Member Function Documentation\par
+\pard\plain 
+{\xe \v test_config_jira_web_server_setup\:tests.test_web_config.TestWebConfig}
+{\xe \v tests.test_web_config.TestWebConfig\:test_config_jira_web_server_setup}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup (  {\i self},   {\i mock_resource_filename},   {\i mock_server},   {\i mock_webbrowser})}}
+\par
+{\bkmkstart AAAAAAAAOU}
+{\bkmkend AAAAAAAAOU}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Test the configuration and setup of a JIRA web server.\par
+\par
+This function tests the entire process of setting up a JIRA web server,\par
+including mocking necessary resources, configuring the server to shut\par
+down after handling one request, and verifying that the web browser is\par
+opened with the correct URL. The function uses several mocks to simulate\par
+external dependencies such as resource files, servers, and web browsers.\par
+\par
+Args:\par
+    mock_resource_filename (MagicMock): A MagicMock object for simulating the `resource_filename` function.\par
+    mock_server (MagicMock): A MagicMock object for simulating the server setup.\par
+    mock_webbrowser (MagicMock): A MagicMock object for simulating the web browser opening.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__web__config_1_1TestWebConfig_a06e600222e426b003850509cb1d3190a_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\xe \v test_config_llm_web_server_setup\:tests.test_web_config.TestWebConfig}
+{\xe \v tests.test_web_config.TestWebConfig\:test_config_llm_web_server_setup}
+\pard\plain \s4\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs20\cgrid {
+{\b 
+def tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup (  {\i self},   {\i mock_resource_filename},   {\i mock_server},   {\i mock_webbrowser})}}
+\par
+{\bkmkstart AAAAAAAAOV}
+{\bkmkend AAAAAAAAOV}
+{
+\pard\plain \s61\li360\sa60\sb30\qj\widctlpar\qj\adjustright \fs20\cgrid 
+{\s17\sa60\sb30\widctlpar\qj \fs22\cgrid 
+{
+\par
+\pard\plain \s41\li360\widctlpar\adjustright \shading1000\cbpat8 \f2\fs16\cgrid Set up and test the web server configuration for an LLM (Large Language\par
+Model) web interface.\par
+\par
+This function configures a mock web server for testing purposes,\par
+including setting up resource filenames, mocking server behavior, and\par
+verifying that the web browser is opened and the server starts\par
+correctly. The function uses various mocks to simulate external\par
+dependencies such as `resource_filename` and `server`.\par
+\par
+Args:\par
+    mock_resource_filename (MagicMock): A MagicMock object simulating the `resource_filename` function.\par
+    mock_server (MagicMock): A MagicMock object simulating the context manager for the web server.\par
+    mock_webbrowser (MagicMock): A MagicMock object simulating the `webbrowser` module.\par
+}
+ \par
+}Here is the call graph for this function:{
+\pard\plain 
+\par\pard \qc {\field\flddirty {\*\fldinst INCLUDEPICTURE "classtests_1_1test__web__config_1_1TestWebConfig_afc6440352201d207ea8b4d26f8ccfa35_cgraph.svg" \\d \\*MERGEFORMAT}{\fldrslt IMAGE}}\par
+}
+}
+{\pard\widctlpar\brdrb\brdrs\brdrw5\brsp20 \adjustright \par}
+The documentation for this class was generated from the following file:{\par
+\pard\plain \s121\fi-360\li720\widctlpar\jclisttab\tx720{\*\pn \pnlvlbody\ilvl0\ls2\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/{\b test_web_config.py}\par
+}
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+File Documentation{\tc \v File Documentation}
+\par \pard\plain 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md}
+{\bkmkstart AAAAAAAAAA}
+{\bkmkend AAAAAAAAAA}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md}
+{\bkmkstart AAAAAAAAAB}
+{\bkmkend AAAAAAAAAB}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md}
+{\bkmkstart AAAAAAAAAC}
+{\bkmkend AAAAAAAAAC}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md}
+{\bkmkstart AAAAAAAAAD}
+{\bkmkend AAAAAAAAAD}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md}
+{\bkmkstart AAAAAAAAAE}
+{\bkmkend AAAAAAAAAE}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/penify-cli-documentation.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/penify-cli-documentation.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/penify-cli-documentation.md}
+{\bkmkstart AAAAAAAAAF}
+{\bkmkend AAAAAAAAAF}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py}
+{\bkmkstart AAAAAAAAAG}
+{\bkmkend AAAAAAAAAG}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.api_client.APIClient}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.api_client}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py}
+{\bkmkstart AAAAAAAAAH}
+{\bkmkend AAAAAAAAAH}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.base_analyzer.BaseAnalyzer}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.base_analyzer}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py}
+{\bkmkstart AAAAAAAAAI}
+{\bkmkend AAAAAAAAAI}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py}
+{\bkmkstart AAAAAAAAAJ}
+{\bkmkend AAAAAAAAAJ}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py}
+{\bkmkstart AAAAAAAAAK}
+{\bkmkend AAAAAAAAAK}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py}
+{\bkmkstart AAAAAAAAAL}
+{\bkmkend AAAAAAAAAL}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands.auth_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.auth_commands.save_credentials} (api_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.auth_commands.login} (api_url, dashboard_url)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py}
+{\bkmkstart AAAAAAAAAM}
+{\bkmkend AAAAAAAAAM}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands.commit_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.commit_commands.commit_code} (api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.commit_commands.setup_commit_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.commit_commands.handle_commit} (args)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py}
+{\bkmkstart AAAAAAAAAN}
+{\bkmkend AAAAAAAAAN}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands.config_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+None {\b penify_hook.commands.config_commands.load_env_files} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Path {\b penify_hook.commands.config_commands.get_penify_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Any {\b penify_hook.commands.config_commands.get_env_var_or_default} (str env_var, Any default=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.config_commands.save_llm_config} (model, api_base, api_key)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.config_commands.save_jira_config} (url, username, api_token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, str] {\b penify_hook.commands.config_commands.get_llm_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Dict[str, str] {\b penify_hook.commands.config_commands.get_jira_config} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.config_commands.config_llm_web} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.config_commands.config_jira_web} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+Optional[str] {\b penify_hook.commands.config_commands.get_token} ()\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b penify_hook.commands.config_commands.DOTENV_AVAILABLE} = True\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.commands.config_commands.path}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py}
+{\bkmkstart AAAAAAAAAO}
+{\bkmkend AAAAAAAAAO}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands.doc_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.doc_commands.generate_doc} (api_url, token, location=None)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.doc_commands.setup_docgen_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.doc_commands.handle_docgen} (args)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.commands.doc_commands.docgen_description}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py}
+{\bkmkstart AAAAAAAAAP}
+{\bkmkend AAAAAAAAAP}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commands.hook_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.hook_commands.install_git_hook} (location, token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.commands.hook_commands.uninstall_git_hook} (location)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.commands.hook_commands.HOOK_FILENAME} = "post-commit"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.commands.hook_commands.HOOK_TEMPLATE}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py}
+{\bkmkstart AAAAAAAAAQ}
+{\bkmkend AAAAAAAAAQ}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.commit_analyzer.CommitDocGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.commit_analyzer}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py}
+{\bkmkstart AAAAAAAAAR}
+{\bkmkend AAAAAAAAAR}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.config_command}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.config_command.setup_config_parser} (parent_parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.config_command.handle_config} (args)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py}
+{\bkmkstart AAAAAAAAAS}
+{\bkmkend AAAAAAAAAS}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.constants}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.constants.API_URL} = 'http://localhost:8000/api'\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.constants.DASHBOARD_URL} = "https://dashboard.penify.dev/auth/localhost/login"\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py}
+{\bkmkstart AAAAAAAAAT}
+{\bkmkend AAAAAAAAAT}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.file_analyzer.FileAnalyzerGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.file_analyzer}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.file_analyzer.logger} = logging.getLogger(__name__)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py}
+{\bkmkstart AAAAAAAAAU}
+{\bkmkend AAAAAAAAAU}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.folder_analyzer.FolderAnalyzerGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.folder_analyzer}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py}
+{\bkmkstart AAAAAAAAAV}
+{\bkmkend AAAAAAAAAV}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.git_analyzer.GitDocGenHook}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.git_analyzer}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.git_analyzer.logger} = logging.getLogger(__name__)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py}
+{\bkmkstart AAAAAAAAAW}
+{\bkmkend AAAAAAAAAW}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.jira_client.JiraClient}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.jira_client}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+bool {\b penify_hook.jira_client.JIRA_AVAILABLE} = True\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py}
+{\bkmkstart AAAAAAAAAX}
+{\bkmkend AAAAAAAAAX}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.llm_client.LLMClient}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.llm_client}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py}
+{\bkmkstart AAAAAAAAAY}
+{\bkmkend AAAAAAAAAY}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.login_command}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.login_command.setup_login_parser} (parser)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.login_command.handle_login} (args)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py}
+{\bkmkstart AAAAAAAAAZ}
+{\bkmkend AAAAAAAAAZ}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.main}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.main.main} ()\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py}
+{\bkmkstart AAAAAAAABA}
+{\bkmkend AAAAAAAABA}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.ui_utils}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_info} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_success} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_warning} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_error} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_highlight} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.format_file_path} (file_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_info} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_success} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_warning} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_error} (message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_processing} (file_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.print_status} (status, message)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.create_progress_bar} (total, desc="Processing", unit="item")\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.create_stage_progress_bar} (stages, desc="Processing")\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.ui_utils.update_stage} (pbar, stage_name)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.autoreset}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.INFO_COLOR} = Fore.CYAN\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.SUCCESS_COLOR} = Fore.GREEN\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.WARNING_COLOR} = Fore.YELLOW\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.ERROR_COLOR} = Fore.RED\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.HIGHLIGHT_COLOR} = Fore.BLUE\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.ui_utils.NEUTRAL_COLOR} = Fore.WHITE\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.ui_utils.SUCCESS_SYMBOL} = "\'E2\'9C\'93"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.ui_utils.WARNING_SYMBOL} = "\'E2\'97\'8B"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.ui_utils.ERROR_SYMBOL} = "\'E2\'9C\'97"\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+string {\b penify_hook.ui_utils.PROCESSING_SYMBOL} = "\'E2\'9F\'B3"\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py}
+{\bkmkstart AAAAAAAABB}
+{\bkmkend AAAAAAAABB}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b penify_hook.utils.GitRepoNotFoundError}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b penify_hook.utils}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.utils.get_repo_details} (Repo repo)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.utils.recursive_search_git_folder} (folder_path)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b penify_hook.utils.find_git_parent} (path)\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b penify_hook.utils.logger} = logging.getLogger(__name__)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md}
+{\bkmkstart AAAAAAAABC}
+{\bkmkend AAAAAAAABC}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py}
+{\bkmkstart AAAAAAAABD}
+{\bkmkend AAAAAAAABD}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b setup}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Variables\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.name}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.version}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.packages}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.install_requires}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.entry_points}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.author}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.author_email}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.description}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.long_description}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.long_description_content_type}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.url}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.classifiers}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+{\b setup.python_requires}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py}
+{\bkmkstart AAAAAAAABE}
+{\bkmkend AAAAAAAABE}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests.conftest}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py}
+{\bkmkstart AAAAAAAABF}
+{\bkmkend AAAAAAAABF}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b tests.test_commit_commands.TestCommitCommands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests.test_commit_commands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py}
+{\bkmkstart AAAAAAAABG}
+{\bkmkend AAAAAAAABG}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b tests.test_config_commands.TestConfigCommands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests.test_config_commands}\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py}
+{\bkmkstart AAAAAAAABH}
+{\bkmkend AAAAAAAABH}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests.test_doc_commands}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Functions\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_no_location} (mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_file_location} (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_folder_location} (mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_error_handling} (mock_api_client, mock_git_analyzer, mock_exit)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_setup_docgen_parser} ()\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_handle_docgen_install_hook} (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_handle_docgen_uninstall_hook} (mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_handle_docgen_generate} (mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_handle_docgen_no_token} (mock_exit, mock_get_token)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_with_file_exception} (mock_api_client, mock_getcwd)\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+def {\b tests.test_doc_commands.test_generate_doc_with_folder_exception} (mock_api_client, mock_getcwd)\par
+}
+\par \pard\plain 
+
+\pard\plain \sect\sbkpage
+\s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+\pard\plain \s2\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs28\kerning28\cgrid 
+/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py File Reference\par \pard\plain 
+{\tc\tcl2 \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py}
+{\xe \v /tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py}
+{\bkmkstart AAAAAAAABI}
+{\bkmkend AAAAAAAABI}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Classes\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+class {\b tests.test_web_config.TestWebConfig}\par
+}
+\pard\plain \s3\sb240\sa60\keepn\widctlpar\adjustright \b\f1\cgrid 
+Namespaces\par
+\pard\plain 
+
+{
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests}\par
+\pard\plain \s120\fi-360\li360\widctlpar\jclisttab\tx360{\*\pn \pnlvlbody\ilvl0\ls1\pnrnot0\pndec }\ls1\adjustright \fs20\cgrid 
+namespace {\b tests.test_web_config}\par
+}
+
+\pard\plain \sect\sbkpage
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid 
+\s1\sb240\sa60\keepn\widctlpar\adjustright \b\f1\fs36\kerning36\cgrid Index\par 
+\pard\plain 
+{\tc \v Index}
+{\field\fldedit {\*\fldinst INDEX \\c2 \\*MERGEFORMAT}{\fldrslt INDEX}}
+}
diff --git a/docs/xml/Doxyfile.xml b/docs/xml/Doxyfile.xml
new file mode 100644
index 0000000..a7e2647
--- /dev/null
+++ b/docs/xml/Doxyfile.xml
@@ -0,0 +1,391 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxyfile xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="doxyfile.xsd" version="1.9.4" xml:lang="en-US">
+  <option  id='DOXYFILE_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
+  <option  id='PROJECT_NAME' default='no' type='string'><value><![CDATA[penify-cli]]></value></option>
+  <option  id='PROJECT_NUMBER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PROJECT_BRIEF' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PROJECT_LOGO' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='OUTPUT_DIRECTORY' default='no' type='string'><value><![CDATA[/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/../doc_penify-cli/docs]]></value></option>
+  <option  id='CREATE_SUBDIRS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CREATE_SUBDIRS_LEVEL' default='yes' type='int'><value>8</value></option>
+  <option  id='ALLOW_UNICODE_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OUTPUT_LANGUAGE' default='yes' type='string'><value>English</value></option>
+  <option  id='BRIEF_MEMBER_DESC' default='yes' type='bool'><value>YES</value></option>
+  <option  id='REPEAT_BRIEF' default='yes' type='bool'><value>YES</value></option>
+  <option  id='ABBREVIATE_BRIEF' default='yes' type='stringlist'>
+    <value><![CDATA["The $name class"]]></value>
+    <value><![CDATA["The $name widget"]]></value>
+    <value><![CDATA["The $name file"]]></value>
+    <value><![CDATA[is]]></value>
+    <value><![CDATA[provides]]></value>
+    <value><![CDATA[specifies]]></value>
+    <value><![CDATA[contains]]></value>
+    <value><![CDATA[represents]]></value>
+    <value><![CDATA[a]]></value>
+    <value><![CDATA[an]]></value>
+    <value><![CDATA[the]]></value>
+  </option>
+  <option  id='ALWAYS_DETAILED_SEC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_INHERITED_MEMB' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FULL_PATH_NAMES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='STRIP_FROM_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='STRIP_FROM_INC_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='SHORT_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='JAVADOC_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='JAVADOC_BANNER' default='yes' type='bool'><value>NO</value></option>
+  <option  id='QT_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MULTILINE_CPP_IS_BRIEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PYTHON_DOCSTRING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INHERIT_DOCS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SEPARATE_MEMBER_PAGES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TAB_SIZE' default='yes' type='int'><value>4</value></option>
+  <option  id='ALIASES' default='yes' type='stringlist'>
+  </option>
+  <option  id='OPTIMIZE_OUTPUT_FOR_C' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_JAVA' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_FOR_FORTRAN' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_VHDL' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OPTIMIZE_OUTPUT_SLICE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTENSION_MAPPING' default='yes' type='stringlist'>
+  </option>
+  <option  id='MARKDOWN_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='TOC_INCLUDE_HEADINGS' default='yes' type='int'><value>5</value></option>
+  <option  id='AUTOLINK_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='BUILTIN_STL_SUPPORT' default='no' type='bool'><value>YES</value></option>
+  <option  id='CPP_CLI_SUPPORT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SIP_SUPPORT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='IDL_PROPERTY_SUPPORT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DISTRIBUTE_GROUP_DOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GROUP_NESTED_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SUBGROUPING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INLINE_GROUPED_CLASSES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_SIMPLE_STRUCTS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TYPEDEF_HIDES_STRUCT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LOOKUP_CACHE_SIZE' default='yes' type='int'><value>0</value></option>
+  <option  id='NUM_PROC_THREADS' default='yes' type='int'><value>1</value></option>
+  <option  id='EXTRACT_ALL' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_PRIVATE' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_PRIV_VIRTUAL' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_PACKAGE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_STATIC' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_LOCAL_CLASSES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='EXTRACT_LOCAL_METHODS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTRACT_ANON_NSPACES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RESOLVE_UNNAMED_PARAMS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HIDE_UNDOC_MEMBERS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_UNDOC_CLASSES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_FRIEND_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_IN_BODY_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INTERNAL_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CASE_SENSE_NAMES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HIDE_SCOPE_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HIDE_COMPOUND_REFERENCE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SHOW_HEADERFILE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_INCLUDE_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_GROUPED_MEMB_INC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FORCE_LOCAL_INCLUDES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_INFO' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SORT_MEMBER_DOCS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SORT_BRIEF_DOCS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_MEMBERS_CTORS_1ST' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_GROUP_NAMES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SORT_BY_SCOPE_NAME' default='yes' type='bool'><value>NO</value></option>
+  <option  id='STRICT_PROTO_MATCHING' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_TODOLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_TESTLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_BUGLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GENERATE_DEPRECATEDLIST' default='yes' type='bool'><value>YES</value></option>
+  <option  id='ENABLED_SECTIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MAX_INITIALIZER_LINES' default='yes' type='int'><value>30</value></option>
+  <option  id='SHOW_USED_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_FILES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SHOW_NAMESPACES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='FILE_VERSION_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LAYOUT_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='CITE_BIB_FILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='QUIET' default='no' type='bool'><value>YES</value></option>
+  <option  id='WARNINGS' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_UNDOCUMENTED' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_DOC_ERROR' default='no' type='bool'><value>NO</value></option>
+  <option  id='WARN_IF_INCOMPLETE_DOC' default='yes' type='bool'><value>YES</value></option>
+  <option  id='WARN_NO_PARAMDOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='WARN_AS_ERROR' default='yes' type='string'><value>NO</value></option>
+  <option  id='WARN_FORMAT' default='yes' type='string'><value><![CDATA["$file:$line: $text"]]></value></option>
+  <option  id='WARN_LINE_FORMAT' default='yes' type='string'><value><![CDATA["at line $line of file $file"]]></value></option>
+  <option  id='WARN_LOGFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='INPUT' default='no' type='stringlist'>
+    <value><![CDATA[/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli]]></value>
+  </option>
+  <option  id='INPUT_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
+  <option  id='FILE_PATTERNS' default='yes' type='stringlist'>
+    <value><![CDATA[*.c]]></value>
+    <value><![CDATA[*.cc]]></value>
+    <value><![CDATA[*.cxx]]></value>
+    <value><![CDATA[*.cpp]]></value>
+    <value><![CDATA[*.c++]]></value>
+    <value><![CDATA[*.java]]></value>
+    <value><![CDATA[*.ii]]></value>
+    <value><![CDATA[*.ixx]]></value>
+    <value><![CDATA[*.ipp]]></value>
+    <value><![CDATA[*.i++]]></value>
+    <value><![CDATA[*.inl]]></value>
+    <value><![CDATA[*.idl]]></value>
+    <value><![CDATA[*.ddl]]></value>
+    <value><![CDATA[*.odl]]></value>
+    <value><![CDATA[*.h]]></value>
+    <value><![CDATA[*.hh]]></value>
+    <value><![CDATA[*.hxx]]></value>
+    <value><![CDATA[*.hpp]]></value>
+    <value><![CDATA[*.h++]]></value>
+    <value><![CDATA[*.l]]></value>
+    <value><![CDATA[*.cs]]></value>
+    <value><![CDATA[*.d]]></value>
+    <value><![CDATA[*.php]]></value>
+    <value><![CDATA[*.php4]]></value>
+    <value><![CDATA[*.php5]]></value>
+    <value><![CDATA[*.phtml]]></value>
+    <value><![CDATA[*.inc]]></value>
+    <value><![CDATA[*.m]]></value>
+    <value><![CDATA[*.markdown]]></value>
+    <value><![CDATA[*.md]]></value>
+    <value><![CDATA[*.mm]]></value>
+    <value><![CDATA[*.dox]]></value>
+    <value><![CDATA[*.py]]></value>
+    <value><![CDATA[*.pyw]]></value>
+    <value><![CDATA[*.f90]]></value>
+    <value><![CDATA[*.f95]]></value>
+    <value><![CDATA[*.f03]]></value>
+    <value><![CDATA[*.f08]]></value>
+    <value><![CDATA[*.f18]]></value>
+    <value><![CDATA[*.f]]></value>
+    <value><![CDATA[*.for]]></value>
+    <value><![CDATA[*.vhd]]></value>
+    <value><![CDATA[*.vhdl]]></value>
+    <value><![CDATA[*.ucf]]></value>
+    <value><![CDATA[*.qsf]]></value>
+    <value><![CDATA[*.ice]]></value>
+  </option>
+  <option  id='RECURSIVE' default='no' type='bool'><value>YES</value></option>
+  <option  id='EXCLUDE' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXCLUDE_SYMLINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXCLUDE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXCLUDE_SYMBOLS' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXAMPLE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXAMPLE_PATTERNS' default='yes' type='stringlist'>
+    <value><![CDATA[*]]></value>
+  </option>
+  <option  id='EXAMPLE_RECURSIVE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='IMAGE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='INPUT_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='FILTER_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='FILTER_SOURCE_FILES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='FILTER_SOURCE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='USE_MDFILE_AS_MAINPAGE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SOURCE_BROWSER' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INLINE_SOURCES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='STRIP_CODE_COMMENTS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='REFERENCED_BY_RELATION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='REFERENCES_RELATION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='REFERENCES_LINK_SOURCE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SOURCE_TOOLTIPS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='USE_HTAGS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='VERBATIM_HEADERS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CLANG_ASSISTED_PARSING' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CLANG_ADD_INC_PATHS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CLANG_OPTIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='CLANG_DATABASE_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ALPHABETICAL_INDEX' default='yes' type='bool'><value>YES</value></option>
+  <option  id='IGNORE_PREFIX' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_HTML' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HTML_OUTPUT' default='yes' type='string'><value><![CDATA[html]]></value></option>
+  <option  id='HTML_FILE_EXTENSION' default='yes' type='string'><value><![CDATA[.html]]></value></option>
+  <option  id='HTML_HEADER' default='no' type='string'><value><![CDATA[./header.html]]></value></option>
+  <option  id='HTML_FOOTER' default='no' type='string'><value><![CDATA[./footer.html]]></value></option>
+  <option  id='HTML_STYLESHEET' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HTML_EXTRA_STYLESHEET' default='no' type='stringlist'>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome.css]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-sidebar-only.css]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-sidebar-only-darkmode-toggle.css]]></value>
+  </option>
+  <option  id='HTML_EXTRA_FILES' default='no' type='stringlist'>
+    <value><![CDATA[./doxygen-awesome-css/toggle-alternative-theme.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-darkmode-toggle.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-fragment-copy-button.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-interactive-toc.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-paragraph-link.js]]></value>
+    <value><![CDATA[./doxygen-awesome-css/doxygen-awesome-tabs.js]]></value>
+  </option>
+  <option  id='HTML_COLORSTYLE_HUE' default='yes' type='int'><value>220</value></option>
+  <option  id='HTML_COLORSTYLE_SAT' default='yes' type='int'><value>100</value></option>
+  <option  id='HTML_COLORSTYLE_GAMMA' default='yes' type='int'><value>80</value></option>
+  <option  id='HTML_TIMESTAMP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HTML_DYNAMIC_MENUS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HTML_DYNAMIC_SECTIONS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='HTML_INDEX_NUM_ENTRIES' default='yes' type='int'><value>100</value></option>
+  <option  id='GENERATE_DOCSET' default='yes' type='bool'><value>NO</value></option>
+  <option  id='DOCSET_FEEDNAME' default='yes' type='string'><value><![CDATA["Doxygen generated docs"]]></value></option>
+  <option  id='DOCSET_FEEDURL' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='DOCSET_BUNDLE_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='DOCSET_PUBLISHER_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Publisher]]></value></option>
+  <option  id='DOCSET_PUBLISHER_NAME' default='yes' type='string'><value><![CDATA[Publisher]]></value></option>
+  <option  id='GENERATE_HTMLHELP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CHM_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HHC_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_CHI' default='yes' type='bool'><value>NO</value></option>
+  <option  id='CHM_INDEX_ENCODING' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='BINARY_TOC' default='yes' type='bool'><value>NO</value></option>
+  <option  id='TOC_EXPAND' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_QHP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='QCH_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_NAMESPACE' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='QHP_VIRTUAL_FOLDER' default='yes' type='string'><value><![CDATA[doc]]></value></option>
+  <option  id='QHP_CUST_FILTER_NAME' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_CUST_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHP_SECT_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='QHG_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_ECLIPSEHELP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='ECLIPSE_DOC_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
+  <option  id='DISABLE_INDEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_TREEVIEW' default='no' type='bool'><value>YES</value></option>
+  <option  id='FULL_SIDEBAR' default='no' type='bool'><value>YES</value></option>
+  <option  id='ENUM_VALUES_PER_LINE' default='yes' type='int'><value>4</value></option>
+  <option  id='TREEVIEW_WIDTH' default='yes' type='int'><value>250</value></option>
+  <option  id='EXT_LINKS_IN_WINDOW' default='yes' type='bool'><value>NO</value></option>
+  <option  id='OBFUSCATE_EMAILS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='HTML_FORMULA_FORMAT' default='yes' type='string'><value>png</value></option>
+  <option  id='FORMULA_FONTSIZE' default='yes' type='int'><value>10</value></option>
+  <option  id='FORMULA_TRANSPARENT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='FORMULA_MACROFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='USE_MATHJAX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MATHJAX_VERSION' default='yes' type='string'><value>MathJax_2</value></option>
+  <option  id='MATHJAX_FORMAT' default='yes' type='string'><value>HTML-CSS</value></option>
+  <option  id='MATHJAX_RELPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MATHJAX_EXTENSIONS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MATHJAX_CODEFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SEARCHENGINE' default='yes' type='bool'><value>YES</value></option>
+  <option  id='SERVER_BASED_SEARCH' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTERNAL_SEARCH' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SEARCHENGINE_URL' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='SEARCHDATA_FILE' default='yes' type='string'><value><![CDATA[searchdata.xml]]></value></option>
+  <option  id='EXTERNAL_SEARCH_ID' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='EXTRA_SEARCH_MAPPINGS' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_LATEX' default='no' type='bool'><value>NO</value></option>
+  <option  id='LATEX_OUTPUT' default='yes' type='string'><value><![CDATA[latex]]></value></option>
+  <option  id='LATEX_CMD_NAME' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MAKEINDEX_CMD_NAME' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
+  <option  id='LATEX_MAKEINDEX_CMD' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
+  <option  id='COMPACT_LATEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PAPER_TYPE' default='yes' type='string'><value>a4</value></option>
+  <option  id='EXTRA_PACKAGES' default='yes' type='stringlist'>
+  </option>
+  <option  id='LATEX_HEADER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LATEX_FOOTER' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='LATEX_EXTRA_STYLESHEET' default='yes' type='stringlist'>
+  </option>
+  <option  id='LATEX_EXTRA_FILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='PDF_HYPERLINKS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='USE_PDFLATEX' default='yes' type='bool'><value>YES</value></option>
+  <option  id='LATEX_BATCHMODE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_HIDE_INDICES' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_BIB_STYLE' default='yes' type='string'><value><![CDATA[plain]]></value></option>
+  <option  id='LATEX_TIMESTAMP' default='yes' type='bool'><value>NO</value></option>
+  <option  id='LATEX_EMOJI_DIRECTORY' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_RTF' default='no' type='bool'><value>YES</value></option>
+  <option  id='RTF_OUTPUT' default='yes' type='string'><value><![CDATA[rtf]]></value></option>
+  <option  id='COMPACT_RTF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RTF_HYPERLINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='RTF_STYLESHEET_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='RTF_EXTENSIONS_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='GENERATE_MAN' default='yes' type='bool'><value>NO</value></option>
+  <option  id='MAN_OUTPUT' default='yes' type='string'><value><![CDATA[man]]></value></option>
+  <option  id='MAN_EXTENSION' default='yes' type='string'><value><![CDATA[.3]]></value></option>
+  <option  id='MAN_SUBDIR' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='MAN_LINKS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_XML' default='no' type='bool'><value>YES</value></option>
+  <option  id='XML_OUTPUT' default='yes' type='string'><value><![CDATA[xml]]></value></option>
+  <option  id='XML_PROGRAMLISTING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='XML_NS_MEMB_FILE_SCOPE' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_DOCBOOK' default='yes' type='bool'><value>NO</value></option>
+  <option  id='DOCBOOK_OUTPUT' default='yes' type='string'><value><![CDATA[docbook]]></value></option>
+  <option  id='GENERATE_AUTOGEN_DEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_PERLMOD' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PERLMOD_LATEX' default='yes' type='bool'><value>NO</value></option>
+  <option  id='PERLMOD_PRETTY' default='yes' type='bool'><value>YES</value></option>
+  <option  id='PERLMOD_MAKEVAR_PREFIX' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ENABLE_PREPROCESSING' default='yes' type='bool'><value>YES</value></option>
+  <option  id='MACRO_EXPANSION' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXPAND_ONLY_PREDEF' default='yes' type='bool'><value>NO</value></option>
+  <option  id='SEARCH_INCLUDES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INCLUDE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='INCLUDE_FILE_PATTERNS' default='yes' type='stringlist'>
+  </option>
+  <option  id='PREDEFINED' default='yes' type='stringlist'>
+  </option>
+  <option  id='EXPAND_AS_DEFINED' default='yes' type='stringlist'>
+  </option>
+  <option  id='SKIP_FUNCTION_MACROS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='TAGFILES' default='yes' type='stringlist'>
+  </option>
+  <option  id='GENERATE_TAGFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='ALLEXTERNALS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='EXTERNAL_GROUPS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='EXTERNAL_PAGES' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIA_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='HIDE_UNDOC_RELATIONS' default='no' type='bool'><value>NO</value></option>
+  <option  id='HAVE_DOT' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DOT_NUM_THREADS' default='yes' type='int'><value>0</value></option>
+  <option  id='DOT_FONTNAME' default='yes' type='string'><value><![CDATA[Helvetica]]></value></option>
+  <option  id='DOT_FONTSIZE' default='yes' type='int'><value>10</value></option>
+  <option  id='DOT_FONTPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='CLASS_GRAPH' default='yes' type='string'><value>YES</value></option>
+  <option  id='COLLABORATION_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='GROUP_GRAPHS' default='yes' type='bool'><value>YES</value></option>
+  <option  id='UML_LOOK' default='no' type='bool'><value>YES</value></option>
+  <option  id='UML_LIMIT_NUM_FIELDS' default='yes' type='int'><value>10</value></option>
+  <option  id='DOT_UML_DETAILS' default='yes' type='string'><value>NO</value></option>
+  <option  id='DOT_WRAP_THRESHOLD' default='yes' type='int'><value>17</value></option>
+  <option  id='TEMPLATE_RELATIONS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='INCLUDE_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='INCLUDED_BY_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='CALL_GRAPH' default='no' type='bool'><value>YES</value></option>
+  <option  id='CALLER_GRAPH' default='no' type='bool'><value>YES</value></option>
+  <option  id='GRAPHICAL_HIERARCHY' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIRECTORY_GRAPH' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DIR_GRAPH_MAX_DEPTH' default='yes' type='int'><value>1</value></option>
+  <option  id='DOT_IMAGE_FORMAT' default='no' type='string'><value>svg</value></option>
+  <option  id='INTERACTIVE_SVG' default='no' type='bool'><value>YES</value></option>
+  <option  id='DOT_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='DOTFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='MSCFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='DIAFILE_DIRS' default='yes' type='stringlist'>
+  </option>
+  <option  id='PLANTUML_JAR_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PLANTUML_CFG_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
+  <option  id='PLANTUML_INCLUDE_PATH' default='yes' type='stringlist'>
+  </option>
+  <option  id='DOT_GRAPH_MAX_NODES' default='no' type='int'><value>120</value></option>
+  <option  id='MAX_DOT_GRAPH_DEPTH' default='yes' type='int'><value>0</value></option>
+  <option  id='DOT_TRANSPARENT' default='yes' type='bool'><value>NO</value></option>
+  <option  id='DOT_MULTI_TARGETS' default='yes' type='bool'><value>NO</value></option>
+  <option  id='GENERATE_LEGEND' default='yes' type='bool'><value>YES</value></option>
+  <option  id='DOT_CLEANUP' default='yes' type='bool'><value>YES</value></option>
+</doxyfile>
diff --git a/docs/xml/README_8md.xml b/docs/xml/README_8md.xml
new file mode 100644
index 0000000..d74636f
--- /dev/null
+++ b/docs/xml/README_8md.xml
@@ -0,0 +1,179 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="README_8md" kind="file" language="Markdown">
+    <compoundname>README.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Tool</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">![Tests](https://github.com/yourorganization/penify-cli/workflows/Tests/badge.svg)</highlight></codeline>
+<codeline><highlight class="normal">![Coverage](./coverage.svg)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">A<sp/>CLI<sp/>tool<sp/>to<sp/>generate<sp/>smart<sp/>commit<sp/>messages,<sp/>code<sp/>documentation,<sp/>and<sp/>more.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Automatically<sp/>generate<sp/>documentation<sp/>for<sp/>your<sp/>code</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Support<sp/>for<sp/>multiple<sp/>programming<sp/>languages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Git<sp/>hook<sp/>integration<sp/>for<sp/>automatic<sp/>documentation<sp/>on<sp/>commits</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Folder<sp/>and<sp/>file<sp/>analysis</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>from<sp/>PyPI:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>provides<sp/>several<sp/>subcommands<sp/>for<sp/>different<sp/>functionalities,<sp/>organized<sp/>into<sp/>basic<sp/>commands<sp/>(no<sp/>login<sp/>required)<sp/>and<sp/>advanced<sp/>commands<sp/>(login<sp/>required).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Commands<sp/>(No<sp/>login<sp/>required)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local<sp/>LLM:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>[-m<sp/>&quot;Optional<sp/>message&quot;]<sp/>[-e]<sp/>[-d]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-m,<sp/>--message`:<sp/>Optional<sp/>custom<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-e,<sp/>--terminal`:<sp/>Open<sp/>editor<sp/>to<sp/>modify<sp/>commit<sp/>message<sp/>before<sp/>committing</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-d,<sp/>--description`:<sp/>Generate<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description<sp/>(without<sp/>this<sp/>flag,<sp/>only<sp/>title<sp/>is<sp/>generated)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Config</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA<sp/>settings:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>[--api-base<sp/>API_URL]<sp/>[--api-key<sp/>API_KEY]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm-web</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>JIRA_URL<sp/>--username<sp/>USERNAME<sp/>--api-token<sp/>TOKEN<sp/>[--verify]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira-web</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Commands<sp/>(Login<sp/>required)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>log<sp/>in<sp/>and<sp/>obtain<sp/>an<sp/>API<sp/>token:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>command<sp/>will<sp/>open<sp/>a<sp/>browser<sp/>window<sp/>for<sp/>authentication.<sp/>After<sp/>successful<sp/>login,<sp/>the<sp/>API<sp/>key<sp/>will<sp/>be<sp/>saved<sp/>locally<sp/>for<sp/>future<sp/>use.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Documentation<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>Git<sp/>diff,<sp/>files<sp/>or<sp/>folders:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>latest<sp/>Git<sp/>commit<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>specific<sp/>file<sp/>or<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>/path/to/file/or/folder</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location`:<sp/>Path<sp/>to<sp/>specific<sp/>file<sp/>or<sp/>folder<sp/>for<sp/>documentation<sp/>generation<sp/>(defaults<sp/>to<sp/>current<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Git<sp/>Hook<sp/>Management</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>or<sp/>uninstall<sp/>Git<sp/>post-commit<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Options:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location`:<sp/>Path<sp/>to<sp/>the<sp/>Git<sp/>repository<sp/>(defaults<sp/>to<sp/>current<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Authentication</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>uses<sp/>an<sp/>API<sp/>token<sp/>for<sp/>authentication<sp/>with<sp/>advanced<sp/>features.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>no<sp/>token<sp/>is<sp/>available<sp/>and<sp/>you<sp/>try<sp/>to<sp/>access<sp/>an<sp/>advanced<sp/>feature,<sp/>you&apos;ll<sp/>be<sp/>prompted<sp/>to<sp/>log<sp/>in.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Local<sp/>LLM<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>commit<sp/>message<sp/>generation,<sp/>Penify<sp/>can<sp/>use<sp/>a<sp/>local<sp/>LLM.<sp/>Configure<sp/>it<sp/>using:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>--api-base<sp/>API_URL<sp/>--api-key<sp/>API_KEY</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Common<sp/>configurations:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>OpenAI:<sp/>`--model<sp/>gpt-3.5-turbo<sp/>--api-base<sp/>https://api.openai.com/v1<sp/>--api-key<sp/>YOUR_KEY`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Anthropic:<sp/>`--model<sp/>claude-2<sp/>--api-base<sp/>https://api.anthropic.com<sp/>--api-key<sp/>YOUR_KEY`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>JIRA<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>JIRA<sp/>integration<sp/>to<sp/>enhance<sp/>commit<sp/>messages<sp/>with<sp/>issue<sp/>details:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>https://your-domain.atlassian.net<sp/>--username<sp/>your-email@example.com<sp/>--api-token<sp/>YOUR_API_TOKEN</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Development</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>set<sp/>up<sp/>the<sp/>development<sp/>environment:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Clone<sp/>the<sp/>repository:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```bash</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>git<sp/>clone<sp/>https://github.com/SingularityX-ai/penify-cli.git</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>Install<sp/>the<sp/>package<sp/>in<sp/>editable<sp/>mode:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```bash</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>pip<sp/>install<sp/>-e<sp/>.</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Running<sp/>Tests</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pytest</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>License</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>project<sp/>is<sp/>licensed<sp/>under<sp/>the<sp/>MIT<sp/>License.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Author</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Suman<sp/>Saurabh<sp/>(ss.sumansaurabh92@gmail.com)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Contributing</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Contributions<sp/>are<sp/>welcome!<sp/>Please<sp/>feel<sp/>free<sp/>to<sp/>submit<sp/>a<sp/>Pull<sp/>Request.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you<sp/>encounter<sp/>any<sp/>problems<sp/>or<sp/>have<sp/>suggestions,<sp/>please<sp/>file<sp/>an<sp/>issue<sp/>on<sp/>the<sp/>[GitHub<sp/>repository](https://github.com/SingularityX-ai/penify/issues).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Support</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>automated<sp/>API<sp/>Documentation,<sp/>Architecture<sp/>Documentation,<sp/>Code<sp/>Documentation,<sp/>Pull<sp/>Request<sp/>Documentation,<sp/>or<sp/>if<sp/>you<sp/>need<sp/>a<sp/>demo,<sp/>please<sp/>join<sp/>our<sp/>[Discord<sp/>support<sp/>channel](https://discord.gg/wqrc8JeV).</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/api__client_8py.xml b/docs/xml/api__client_8py.xml
new file mode 100644
index 0000000..f40173a
--- /dev/null
+++ b/docs/xml/api__client_8py.xml
@@ -0,0 +1,127 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="api__client_8py" kind="file" language="Python">
+    <compoundname>api_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1api__client_1_1APIClient" prot="public">penify_hook::api_client::APIClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1api__client">penify_hook::api_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>requests</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.llm_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>LLMClient</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6" refid="classpenify__hook_1_1api__client_1_1APIClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref>:</highlight></codeline>
+<codeline lineno="7" refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" kindref="member">__init__</ref>(self,<sp/>api_url,<sp/>api_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>bearer_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="8" refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref><sp/>=<sp/>api_url</highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" kindref="member">AUTH_TOKEN</ref><sp/>=<sp/>api_token</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" kindref="member">BEARER_TOKEN</ref><sp/>=<sp/>bearer_token</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" kindref="member">send_file_for_docstring_generation</ref>(self,<sp/>file_name,<sp/>content,<sp/>line_numbers,<sp/>repo_details<sp/>=<sp/>None):</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Send<sp/>file<sp/>content<sp/>and<sp/>modified<sp/>lines<sp/>to<sp/>the<sp/>API<sp/>and<sp/>return<sp/>modified<sp/>content.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;file_path&apos;</highlight><highlight class="normal">:<sp/>file_name,</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;content&apos;</highlight><highlight class="normal">:<sp/>content,</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;modified_lines&apos;</highlight><highlight class="normal">:<sp/>line_numbers</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_details:</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;git_repo&apos;</highlight><highlight class="normal">]<sp/>=<sp/>repo_details</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/cli/file/generate/doc&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.post(url,<sp/>json=payload,headers={</highlight><highlight class="stringliteral">&quot;api-key&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.AUTH_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response.get(</highlight><highlight class="stringliteral">&apos;modified_content&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_message<sp/>=<sp/>response.json().get(</highlight><highlight class="stringliteral">&apos;detail&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>error_message:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_message<sp/>=<sp/>response.text</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(f</highlight><highlight class="stringliteral">&quot;API<sp/>Error:<sp/>{error_message}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="33" refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" kindref="member">generate_commit_summary</ref>(self,<sp/>git_diff,<sp/>instruction:<sp/>str<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>repo_details<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_context:<sp/>dict<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>a<sp/>commit<sp/>summary<sp/>by<sp/>sending<sp/>a<sp/>POST<sp/>request<sp/>to<sp/>the<sp/>API<sp/>endpoint.</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>constructs<sp/>a<sp/>payload<sp/>containing<sp/>the<sp/>git<sp/>diff<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>any<sp/>additional</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instructions<sp/>provided.<sp/>It<sp/>then<sp/>sends<sp/>this<sp/>payload<sp/>to<sp/>a<sp/>specified<sp/>API<sp/>endpoint</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>generate<sp/>a<sp/>summary<sp/>of<sp/>the<sp/>commit.<sp/>If<sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/>it<sp/>returns</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>response<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API;<sp/>otherwise,<sp/>it<sp/>returns<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.<sp/>The<sp/>function<sp/>also</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>handles<sp/>optional<sp/>repository<sp/>details<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA<sp/>context<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>they<sp/>are<sp/>provided.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>git_diff<sp/>(str):<sp/>The<sp/>git<sp/>diff<sp/>of<sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction<sp/>(str):<sp/>Additional<sp/>instruction<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(dict):<sp/>Details<sp/>of<sp/>the<sp/>git<sp/>repository.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>(dict):<sp/>JIRA<sp/>issue<sp/>details<sp/>to<sp/>enhance<sp/>the<sp/>commit<sp/>summary.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>The<sp/>response<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>API<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>request<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>successful,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="51"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="52"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&apos;git_diff&apos;</highlight><highlight class="normal">:<sp/>git_diff,</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;additional_instruction&apos;</highlight><highlight class="normal">:<sp/>instruction</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_details:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;git_repo&apos;</highlight><highlight class="normal">]<sp/>=<sp/>repo_details</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_context:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>payload[</highlight><highlight class="stringliteral">&apos;jira_context&apos;</highlight><highlight class="normal">]<sp/>=<sp/>jira_context</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/cli/commit/summary&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.post(url,<sp/>json=payload,<sp/>headers</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>={</highlight><highlight class="stringliteral">&quot;api-key&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.AUTH_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>print(f&quot;Response:<sp/>{response.status_code}&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>print(f&quot;Error:<sp/>{response.text}&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(f</highlight><highlight class="stringliteral">&quot;API<sp/>Error:<sp/>{response.text}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"></highlight></codeline>
+<codeline lineno="77" refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" kindref="member">get_supported_file_types</ref>(self)<sp/>-&gt;<sp/>list[str]:</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>supported<sp/>file<sp/>types<sp/>from<sp/>the<sp/>API<sp/>or<sp/>return<sp/>a<sp/>default<sp/>list.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/cli/supported_languages&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.get(url)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>[</highlight><highlight class="stringliteral">&quot;py&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;js&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;ts&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;java&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;kt&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;cs&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;c&quot;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"></highlight></codeline>
+<codeline lineno="88" refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" kindref="member">generate_commit_summary_with_llm</ref>(self,<sp/>diff,<sp/>message,<sp/>generate_description:<sp/>bool,<sp/>repo_details,<sp/>llm_client<sp/>:<sp/>LLMClient,<sp/>jira_context=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>a<sp/>commit<sp/>summary<sp/>using<sp/>a<sp/>local<sp/>LLM<sp/>client;<sp/>falls<sp/>back<sp/>to<sp/>API<sp/>on</highlight></codeline>
+<codeline lineno="90"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error.&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="91"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>llm_client.generate_commit_summary(diff,<sp/>message,<sp/>generate_description,<sp/>repo_details,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>using<sp/>local<sp/>LLM:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>API<sp/>for<sp/>commit<sp/>summary</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" kindref="member">generate_commit_summary</ref>(diff,<sp/>message,<sp/>repo_details,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"></highlight></codeline>
+<codeline lineno="98" refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" kindref="member">get_api_key</ref>(self):</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Fetch<sp/>an<sp/>API<sp/>key<sp/>from<sp/>a<sp/>specified<sp/>URL<sp/>using<sp/>a<sp/>Bearer<sp/>token.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref>+</highlight><highlight class="stringliteral">&quot;/v1/apiToken/get&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>requests.get(url,<sp/>headers={</highlight><highlight class="stringliteral">&quot;Authorization&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Bearer<sp/>{self.BEARER_TOKEN}&quot;</highlight><highlight class="normal">},<sp/>timeout=60*10)</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response.status_code<sp/>==<sp/>200:</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>response.json()</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>response.get(</highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Response:<sp/>{response.status_code}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{response.text}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/auth__commands_8py.xml b/docs/xml/auth__commands_8py.xml
new file mode 100644
index 0000000..dcb0ac5
--- /dev/null
+++ b/docs/xml/auth__commands_8py.xml
@@ -0,0 +1,184 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="auth__commands_8py" kind="file" language="Python">
+    <compoundname>auth_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1auth__commands">penify_hook::commands::auth_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1auth__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>urllib.parse</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>random</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>threading<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Thread</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight></codeline>
+<codeline lineno="11" refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" kindref="member">save_credentials</ref>(api_key):</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>save<sp/>in<sp/>.env<sp/>file<sp/>in<sp/>git<sp/>repo<sp/>first</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Save<sp/>the<sp/>API<sp/>key<sp/>in<sp/>a<sp/>priority-based<sp/>manner.</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="15"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>attempts<sp/>to<sp/>save<sp/>the<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>two<sp/>locations,<sp/>based<sp/>on<sp/>priority:</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>1.<sp/>In<sp/>a<sp/>`.env`<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>root<sp/>of<sp/>the<sp/>Git<sp/>repository<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>one<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>found.</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>2.<sp/>In<sp/>a<sp/></highlight><highlight class="keyword">global</highlight><highlight class="normal"><sp/>`.penify`<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>user</highlight><highlight class="stringliteral">&apos;s<sp/>home<sp/>directory<sp/>as<sp/>a</highlight></codeline>
+<codeline lineno="18"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>fallback.<sp/><sp/>The<sp/>function<sp/>first<sp/>tries<sp/>to<sp/>locate<sp/>the<sp/>Git<sp/>repository<sp/>using</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>`recursive_search_git_folder`.<sp/>If<sp/>a<sp/>Git<sp/>repository<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>found,<sp/>it<sp/>reads<sp/>the</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/>existing<sp/>`.env`<sp/>file<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>present),<sp/>updates<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>adds<sp/>the<sp/>API<sp/>key<sp/>under<sp/>the<sp/>key</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>`PENIFY_API_TOKEN`,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>writes<sp/>the<sp/>updated<sp/>content<sp/>back.<sp/>If<sp/>any<sp/>error<sp/>occurs</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>during<sp/>this<sp/>process,<sp/>it<sp/>falls<sp/>back<sp/>to<sp/>saving<sp/>the<sp/>credentials<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keyword">global</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>`.penify`<sp/>file.<sp/>The<sp/>function<sp/>handles<sp/>exceptions<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>appropriate<sp/>error</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/>messages.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>(str):<sp/>The<sp/>API<sp/>key<sp/>to<sp/>save.</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>saved<sp/>successfully,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>We&apos;re<sp/>in<sp/>a<sp/>git<sp/>repo,<sp/>save<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>API<sp/>token</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;API<sp/>token<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>to<sp/>.env<sp/>file:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>saving<sp/>in<sp/>.penify<sp/>global<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>finding<sp/>git<sp/>repository:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fall<sp/>back<sp/>to<sp/>global<sp/>.penify<sp/>file<sp/>in<sp/>home<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path.home()</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>penify_file<sp/>=<sp/>home_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>the<sp/>file<sp/>already<sp/>exists,<sp/>add<sp/>the<sp/>new<sp/>api<sp/>key<sp/>to<sp/>the<sp/>existing<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>penify_file.exists():</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials<sp/>=<sp/>json.load(f)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials[</highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>credentials<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">:<sp/>api_key</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json.dump(credentials,<sp/>f)</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;API<sp/>token<sp/>saved<sp/>to<sp/>global<sp/>config<sp/>{penify_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>credentials:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"></highlight></codeline>
+<codeline lineno="90" refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" kindref="member">login</ref>(api_url,<sp/>dashboard_url):</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Open<sp/>the<sp/>login<sp/>page<sp/>in<sp/>a<sp/>web<sp/>browser<sp/>and<sp/>capture<sp/>the<sp/>token<sp/>via<sp/>redirect.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/>redirect_url<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;http://localhost:{redirect_port}/callback&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/>full_login_url<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{dashboard_url}?redirectUri={urllib.parse.quote(redirect_url)}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>login<sp/>page<sp/>in<sp/>your<sp/>default<sp/>web<sp/>browser:<sp/>{full_login_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/>webbrowser.open(full_login_url)</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">TokenHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>a<sp/>GET<sp/>request<sp/>to<sp/>process<sp/>login<sp/>token<sp/>and<sp/>redirect<sp/>or<sp/>display<sp/>error</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message.&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>query<sp/>=<sp/>urllib.parse.urlparse(self.path).query</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>query_components<sp/>=<sp/>urllib.parse.parse_qs(query)</highlight></codeline>
+<codeline lineno="107"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>=<sp/>query_components.get(&quot;token&quot;</highlight><highlight class="normal">,<sp/>[</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">])[0]</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;html&gt;</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;head&gt;</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;script&gt;</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>setTimeout(function()<sp/>{</highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>window.location.href<sp/>=<sp/>&apos;https://dashboard.penify.dev&apos;</highlight><highlight class="normal">;</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>},<sp/>5000);</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/script&gt;</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/head&gt;</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;body&gt;</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;h1&gt;Login<sp/>Successful!&lt;/h1&gt;</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;p&gt;You<sp/>will<sp/>be<sp/>redirected<sp/>to<sp/>the<sp/>Penify<sp/>dashboard<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>5<sp/>seconds.<sp/>You<sp/>can<sp/>also<sp/>close<sp/>this<sp/>window<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>to<sp/>the<sp/>CLI.&lt;/p&gt;</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/body&gt;</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/html&gt;</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="128"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(response.encode())</highlight></codeline>
+<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f&quot;\nLogin<sp/>successful!<sp/>Fetching<sp/>API<sp/>keys...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>=<sp/>APIClient(api_url,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>token).get_api_key()</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_key:</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" kindref="member">save_credentials</ref>(api_key)</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;API<sp/>keys<sp/>fetched<sp/>and<sp/>saved<sp/>successfully.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;You&apos;ll<sp/>be<sp/>redirected<sp/>to<sp/>the<sp/>Penify<sp/>dashboard.<sp/>You<sp/>can<sp/>continue<sp/>using<sp/>the<sp/>CLI.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>fetch<sp/>API<sp/>keys.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(400)</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="144"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;html&gt;</highlight></codeline>
+<codeline lineno="145"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;body&gt;</highlight></codeline>
+<codeline lineno="146"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;h1&gt;Login<sp/>Failed&lt;/h1&gt;</highlight></codeline>
+<codeline lineno="147"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;p&gt;Please<sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>again.&lt;/p&gt;</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/body&gt;</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;/html&gt;</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="151"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(response.encode())</highlight></codeline>
+<codeline lineno="152"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;\nLogin<sp/>failed.<sp/>Please<sp/>try<sp/>again.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Suppress<sp/>log<sp/>messages.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>TokenHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Listening<sp/>on<sp/>port<sp/>{redirect_port}<sp/>for<sp/>the<sp/>redirect...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Login<sp/>process<sp/>completed.<sp/>You<sp/>can<sp/>now<sp/>use<sp/>other<sp/>commands<sp/>with<sp/>your<sp/>API<sp/>token.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/base__analyzer_8py.xml b/docs/xml/base__analyzer_8py.xml
new file mode 100644
index 0000000..3071dfd
--- /dev/null
+++ b/docs/xml/base__analyzer_8py.xml
@@ -0,0 +1,36 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="base__analyzer_8py" kind="file" language="Python">
+    <compoundname>base_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public">penify_hook::base_analyzer::BaseAnalyzer</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1base__analyzer">penify_hook::base_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1base__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>:</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344" kindref="member">__init__</ref>(self,<sp/>folder_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kindref="member">folder_path</ref><sp/>=<sp/>folder_path</highlight></codeline>
+<codeline lineno="11" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref><sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(folder_path)</highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kindref="member">folder_path</ref>:</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref><sp/>=<sp/>Repo(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>)</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref><sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" kindref="member">get_repo_details</ref>(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>)</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kindref="member">relative_file_path</ref><sp/>=<sp/>os.path.relpath(folder_path)</highlight></codeline>
+<codeline lineno="19" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref><sp/>=<sp/>api_client</highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref><sp/>=<sp/>set(api_client.get_supported_file_types())</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classException.xml b/docs/xml/classException.xml
new file mode 100644
index 0000000..2277730
--- /dev/null
+++ b/docs/xml/classException.xml
@@ -0,0 +1,32 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classException" kind="class" language="Python" prot="public">
+    <compoundname>Exception</compoundname>
+    <derivedcompoundref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public" virt="non-virtual">penify_hook.utils.GitRepoNotFoundError</derivedcompoundref>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="2">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="1" relation="public-inheritance">
+        </childnode>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="9" column="1"/>
+    <listofallmembers>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1api__client_1_1APIClient.xml b/docs/xml/classpenify__hook_1_1api__client_1_1APIClient.xml
new file mode 100644
index 0000000..e843ba6
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1api__client_1_1APIClient.xml
@@ -0,0 +1,290 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1api__client_1_1APIClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::api_client::APIClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::api_url</definition>
+        <argsstring></argsstring>
+        <name>api_url</name>
+        <qualifiedname>penify_hook.api_client.APIClient.api_url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="8" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" compoundref="api__client_8py" startline="33" endline="76">penify_hook.api_client.APIClient.generate_commit_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" compoundref="api__client_8py" startline="98" endline="112">penify_hook.api_client.APIClient.get_api_key</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" compoundref="api__client_8py" startline="77" endline="87">penify_hook.api_client.APIClient.get_supported_file_types</referencedby>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" compoundref="api__client_8py" startline="12" endline="32">penify_hook.api_client.APIClient.send_file_for_docstring_generation</referencedby>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::AUTH_TOKEN</definition>
+        <argsstring></argsstring>
+        <name>AUTH_TOKEN</name>
+        <qualifiedname>penify_hook.api_client.APIClient.AUTH_TOKEN</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="9" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.api_client.APIClient::BEARER_TOKEN</definition>
+        <argsstring></argsstring>
+        <name>BEARER_TOKEN</name>
+        <qualifiedname>penify_hook.api_client.APIClient.BEARER_TOKEN</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="10" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.__init__</definition>
+        <argsstring>(self, api_url, str api_token=None, str bearer_token=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.api_client.APIClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kindref="member">api_url</ref></type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_token</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>bearer_token</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="7" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="7" bodyend="11"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.send_file_for_docstring_generation</definition>
+        <argsstring>(self, file_name, content, line_numbers, repo_details=None)</argsstring>
+        <name>send_file_for_docstring_generation</name>
+        <qualifiedname>penify_hook.api_client.APIClient.send_file_for_docstring_generation</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>file_name</type>
+          <defname>file_name</defname>
+        </param>
+        <param>
+          <type>content</type>
+          <defname>content</defname>
+        </param>
+        <param>
+          <type>line_numbers</type>
+          <defname>line_numbers</defname>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Send file content and modified lines to the API and return modified content.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="12" bodyend="32"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.generate_commit_summary</definition>
+        <argsstring>(self, git_diff, str instruction=&quot;&quot;, repo_details=None, dict jira_context=None)</argsstring>
+        <name>generate_commit_summary</name>
+        <qualifiedname>penify_hook.api_client.APIClient.generate_commit_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>git_diff</type>
+          <defname>git_diff</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>instruction</declname>
+          <defval>&quot;&quot;</defval>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>dict</type>
+          <declname>jira_context</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates a commit summary by sending a POST request to the API endpoint.
+
+This function constructs a payload containing the git diff and any additional
+instructions provided. It then sends this payload to a specified API endpoint
+to generate a summary of the commit. If the request is successful, it returns
+the response from the API; otherwise, it returns None. The function also
+handles optional repository details and JIRA context if they are provided.
+
+Args:
+    git_diff (str): The git diff of the commit.
+    instruction (str): Additional instruction for the commit. Defaults to &quot;&quot;.
+    repo_details (dict): Details of the git repository. Defaults to None.
+    jira_context (dict): JIRA issue details to enhance the commit summary. Defaults to None.
+
+Returns:
+    dict: The response from the API if the request is successful, None otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="33" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="33" bodyend="76"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" compoundref="api__client_8py" startline="88" endline="97">penify_hook.api_client.APIClient.generate_commit_summary_with_llm</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>list[str]</type>
+        <definition> list[str] penify_hook.api_client.APIClient.get_supported_file_types</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_supported_file_types</name>
+        <qualifiedname>penify_hook.api_client.APIClient.get_supported_file_types</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve supported file types from the API or return a default list.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="77" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="77" bodyend="87"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.generate_commit_summary_with_llm</definition>
+        <argsstring>(self, diff, message, bool generate_description, repo_details, LLMClient llm_client, jira_context=None)</argsstring>
+        <name>generate_commit_summary_with_llm</name>
+        <qualifiedname>penify_hook.api_client.APIClient.generate_commit_summary_with_llm</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>diff</type>
+          <defname>diff</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <param>
+          <type>repo_details</type>
+          <defname>repo_details</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient" kindref="compound">LLMClient</ref></type>
+          <declname>llm_client</declname>
+        </param>
+        <param>
+          <type>jira_context</type>
+          <defname>jira_context</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates a commit summary using a local LLM client; falls back to API on
+error.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="88" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="88" bodyend="97"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" compoundref="api__client_8py" startline="33" endline="76">penify_hook.api_client.APIClient.generate_commit_summary</references>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="174">penify_hook.llm_client.LLMClient.generate_commit_summary</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.api_client.APIClient.get_api_key</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_api_key</name>
+        <qualifiedname>penify_hook.api_client.APIClient.get_api_key</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Fetch an API key from a specified URL using a Bearer token.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="98" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="98" bodyend="112"/>
+        <references refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" compoundref="api__client_8py" startline="8">penify_hook.api_client.APIClient.api_url</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.api_client.APIClient</label>
+        <link refid="classpenify__hook_1_1api__client_1_1APIClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" bodystart="6" bodyend="112"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>api_url</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>AUTH_TOKEN</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>BEARER_TOKEN</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>generate_commit_summary</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>generate_commit_summary_with_llm</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>get_api_key</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>get_supported_file_types</name></member>
+      <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" prot="public" virt="non-virtual"><scope>penify_hook::api_client::APIClient</scope><name>send_file_for_docstring_generation</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml b/docs/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
new file mode 100644
index 0000000..3c6e3dc
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer.xml
@@ -0,0 +1,211 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::base_analyzer::BaseAnalyzer</compoundname>
+    <derivedcompoundref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public" virt="non-virtual">penify_hook.commit_analyzer.CommitDocGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public" virt="non-virtual">penify_hook.file_analyzer.FileAnalyzerGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public" virt="non-virtual">penify_hook.folder_analyzer.FolderAnalyzerGenHook</derivedcompoundref>
+    <derivedcompoundref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public" virt="non-virtual">penify_hook.git_analyzer.GitDocGenHook</derivedcompoundref>
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diff --git a/docs/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml b/docs/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
new file mode 100644
index 0000000..0a384a0
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook.xml
@@ -0,0 +1,278 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
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+    <compoundname>penify_hook::commit_analyzer::CommitDocGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
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+        <type></type>
+        <definition>penify_hook.commit_analyzer.CommitDocGenHook::llm_client</definition>
+        <argsstring></argsstring>
+        <name>llm_client</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.llm_client</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
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+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="18" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="65">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
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+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook.__init__</definition>
+        <argsstring>(self, str repo_path, APIClient api_client, llm_client=None, jira_client=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
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+          <declname>api_client</declname>
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+          <type><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref></type>
+          <defname>llm_client</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_client</type>
+          <defname>jira_client</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
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+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="15" bodyend="20"/>
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+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" compoundref="commit__analyzer_8py" startline="15" endline="20">penify_hook.commit_analyzer.CommitDocGenHook.__init__</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>dict</type>
+        <definition> dict penify_hook.commit_analyzer.CommitDocGenHook.get_summary</definition>
+        <argsstring>(self, str instruction, bool generate_description)</argsstring>
+        <name>get_summary</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.get_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>instruction</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a summary for the commit based on the staged changes.
+
+This function retrieves the differences of the staged changes in the repository
+and generates a commit summary using the provided instruction. If there are no
+changes staged for commit, an exception is raised. If a JIRA client is
+connected, it will attempt to extract issue keys from the current branch and
+use them to fetch context. The summary can be generated either with a Language
+Model (LLM) client or through the API client.
+
+Args:
+    instruction (str): A string containing instructions for generating the commit summary.
+    generate_description (bool): Whether to include detailed descriptions in the summary.
+
+Raises:
+    ValueError: If there are no changes staged for commit.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="21" bodyend="65"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" compoundref="commit__analyzer_8py" startline="18">penify_hook.commit_analyzer.CommitDocGenHook.llm_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook.run</definition>
+        <argsstring>(self, Optional[str] msg, bool edit_commit_message, bool generate_description)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>Optional</type>
+          <declname>msg</declname>
+          <array>[str]</array>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>edit_commit_message</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook.
+
+This method processes the modified files from the last commit, stages them, and
+creates an auto-commit with an optional message. It also handles JIRA
+integration if available. If there is an error generating the commit summary,
+an exception is raised.
+
+Args:
+    msg (Optional[str]): An optional message to include in the commit.
+    edit_commit_message (bool): A flag indicating whether to open the git commit
+        edit terminal after committing.
+    generate_description (bool): A flag indicating whether to include a description
+        in the commit message.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="66" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="66" bodyend="102"/>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" compoundref="commit__analyzer_8py" startline="158" endline="173">penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="65">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="56" endline="59">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="103" endline="157">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</definition>
+        <argsstring>(self, str title, str description, str msg)</argsstring>
+        <name>process_jira_integration</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>description</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>msg</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Process JIRA integration by extracting issue keys from commit message
+components and branch name.
+
+This function looks for JIRA issue keys in the provided commit title,
+description, original user message, and the active branch name. It uses these
+keys to update the commit message with JIRA information and adds comments to
+the corresponding JIRA issues. If no keys are found, it logs a warning.
+
+Args:
+    title (str): The generated commit title.
+    description (str): The generated commit description.
+    msg (str): The original user message that might contain JIRA references.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with included JIRA
+        information.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="103" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="103" bodyend="157"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="60" endline="63">penify_hook.ui_utils.print_warning</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="private-func">
+      <memberdef kind="function" id="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</definition>
+        <argsstring>(self)</argsstring>
+        <name>_amend_commit</name>
+        <qualifiedname>penify_hook.commit_analyzer.CommitDocGenHook._amend_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Amends the last commit message in the repository.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="158" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="158" bodyend="173"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" compoundref="base__analyzer_8py" startline="11">penify_hook.base_analyzer.BaseAnalyzer.repo_path</references>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.commit_analyzer.CommitDocGenHook</label>
+        <link refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.commit_analyzer.CommitDocGenHook</label>
+        <link refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="14" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" bodystart="14" bodyend="173"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" prot="private" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>_amend_commit</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>get_summary</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>llm_client</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>process_jira_integration</name></member>
+      <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" prot="public" virt="non-virtual"><scope>penify_hook::commit_analyzer::CommitDocGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml b/docs/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
new file mode 100644
index 0000000..f793382
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook.xml
@@ -0,0 +1,195 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::file_analyzer::FileAnalyzerGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.file_analyzer.FileAnalyzerGenHook::file_path</definition>
+        <argsstring></argsstring>
+        <name>file_path</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="22" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.__init__</definition>
+        <argsstring>(self, str file_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>file_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="21" bodyend="26"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</definition>
+        <argsstring>(self, file_path, pbar, str new_param=&quot;&quot;)</argsstring>
+        <name>process_file</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref></type>
+          <defname>file_path</defname>
+        </param>
+        <param>
+          <type>pbar</type>
+          <defname>pbar</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>new_param</declname>
+          <defval>&quot;&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Processes a file by validating its extension, reading content,
+generating documentation, and writing changes back to the file.  The function
+performs several stages of processing: 1. Validates the file&apos;s extension to
+ensure it is supported. 2. Reads the content of the file. 3. Sends the file
+content for documentation generation. 4. Writes the generated documentation
+back to the file if there are changes.
+
+Args:
+    file_path (str): The path of the file to be processed.
+    pbar (tqdm.tqdm): A progress bar object to update the status of processing stages.
+    new_param (str?): An additional parameter for future use. Defaults to an empty string.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="27" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="27" bodyend="100"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="60" endline="63">penify_hook.ui_utils.print_warning</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" compoundref="base__analyzer_8py" startline="18">penify_hook.base_analyzer.BaseAnalyzer.relative_file_path</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" compoundref="base__analyzer_8py" startline="20">penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" compoundref="ui__utils_8py" startline="105" endline="111">penify_hook.ui_utils.update_stage</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</definition>
+        <argsstring>(self, file_path)</argsstring>
+        <name>print_processing</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref></type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Prints a message indicating that a file is being processed.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="101" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="101" bodyend="105"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" compoundref="ui__utils_8py" startline="48" endline="51">penify_hook.ui_utils.format_file_path</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.file_analyzer.FileAnalyzerGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.file_analyzer.FileAnalyzerGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Runs the documentation process with a progress bar.
+
+This method orchestrates the documentation process by creating a progress bar,
+processing the file, and handling exceptions to ensure the progress bar
+completes properly. It updates the progress bar through various stages and
+provides feedback based on the result of the file processing.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="106" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="106" bodyend="155"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" compoundref="ui__utils_8py" startline="94" endline="104">penify_hook.ui_utils.create_stage_progress_bar</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" compoundref="file__analyzer_8py" startline="22">penify_hook.file_analyzer.FileAnalyzerGenHook.file_path</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" compoundref="ui__utils_8py" startline="73" endline="83">penify_hook.ui_utils.print_status</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="56" endline="59">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="78" endline="133">penify_hook.git_analyzer.GitDocGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="100">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" compoundref="ui__utils_8py" startline="105" endline="111">penify_hook.ui_utils.update_stage</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.file_analyzer.FileAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.file_analyzer.FileAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="20" bodyend="155"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>file_path</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>print_processing</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>process_file</name></member>
+      <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" prot="public" virt="non-virtual"><scope>penify_hook::file_analyzer::FileAnalyzerGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml b/docs/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
new file mode 100644
index 0000000..1df1368
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook.xml
@@ -0,0 +1,143 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::folder_analyzer::FolderAnalyzerGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.folder_analyzer.FolderAnalyzerGenHook::dir_path</definition>
+        <argsstring></argsstring>
+        <name>dir_path</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="11" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" compoundref="folder__analyzer_8py" startline="35" endline="52">penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__</definition>
+        <argsstring>(self, str dir_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>dir_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="10" bodyend="13"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</definition>
+        <argsstring>(self, str dir_path)</argsstring>
+        <name>list_all_files_in_dir</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>dir_path</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>List all non-hidden files in a directory and its subdirectories.
+
+This function recursively traverses the specified directory and its
+subdirectories, collecting paths of all non-hidden files. It filters out hidden
+directories and files (those starting with a dot) to ensure only visible files
+are returned.
+
+Args:
+    dir_path (str): The path to the directory whose files and subdirectory files need to be listed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="14" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="14" bodyend="34"/>
+        <referencedby refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" compoundref="folder__analyzer_8py" startline="35" endline="52">penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.folder_analyzer.FolderAnalyzerGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook and process files with a progress bar.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="35" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="35" bodyend="52"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" compoundref="folder__analyzer_8py" startline="11">penify_hook.folder_analyzer.FolderAnalyzerGenHook.dir_path</references>
+        <references refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" compoundref="folder__analyzer_8py" startline="14" endline="34">penify_hook.folder_analyzer.FolderAnalyzerGenHook.list_all_files_in_dir</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.folder_analyzer.FolderAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.folder_analyzer.FolderAnalyzerGenHook</label>
+        <link refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" bodystart="9" bodyend="52"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>dir_path</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>list_all_files_in_dir</name></member>
+      <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" prot="public" virt="non-virtual"><scope>penify_hook::folder_analyzer::FolderAnalyzerGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml b/docs/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
new file mode 100644
index 0000000..f565eb1
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1git__analyzer_1_1GitDocGenHook.xml
@@ -0,0 +1,209 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::git_analyzer::GitDocGenHook</compoundname>
+    <basecompoundref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public" virt="non-virtual">penify_hook.base_analyzer.BaseAnalyzer</basecompoundref>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.__init__</definition>
+        <argsstring>(self, str repo_path, APIClient api_client)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.__init__</qualifiedname>
+        <reimplements refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344">__init__</reimplements>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>repo_path</declname>
+        </param>
+        <param>
+          <type><ref refid="classpenify__hook_1_1api__client_1_1APIClient" kindref="compound">APIClient</ref></type>
+          <declname>api_client</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="20" bodyend="22"/>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" compoundref="git__analyzer_8py" startline="20" endline="22">penify_hook.git_analyzer.GitDocGenHook.__init__</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" compoundref="git__analyzer_8py" startline="20" endline="22">penify_hook.git_analyzer.GitDocGenHook.__init__</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</definition>
+        <argsstring>(self)</argsstring>
+        <name>get_modified_files_in_last_commit</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get the list of files modified in the last commit.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="23" bodyend="31"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</definition>
+        <argsstring>(self, diff_text)</argsstring>
+        <name>get_modified_lines</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>diff_text</type>
+          <defname>diff_text</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extract modified line numbers from a diff text.
+
+This function processes a diff text to identify and extract the line numbers
+that have been modified. It distinguishes between added and deleted lines and
+keeps track of the current line number as it parses through the diff. The
+function handles hunk headers and ensures that any deletions at the end of the
+file are also captured.
+
+Args:
+    diff_text (str): A string containing the diff text to be processed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="32" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="32" bodyend="77"/>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="78" endline="133">penify_hook.git_analyzer.GitDocGenHook.process_file</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.process_file</definition>
+        <argsstring>(self, file_path)</argsstring>
+        <name>process_file</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.process_file</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Processes a file by checking its type, reading its content, and sending it to
+an API.
+
+This method constructs the absolute path of the specified file and verifies if
+the file has a valid extension. If the file type is supported, it reads the
+content of the file and retrieves the differences from the last commit in the
+repository. If changes are detected, it sends the file content along with the
+modified lines to an API for further processing. If the API response indicates
+no changes, the original file will not be overwritten.
+
+Args:
+    file_path (str): The relative path to the file to be processed.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="78" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="78" bodyend="133"/>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" compoundref="base__analyzer_8py" startline="19">penify_hook.base_analyzer.BaseAnalyzer.api_client</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" compoundref="git__analyzer_8py" startline="32" endline="77">penify_hook.git_analyzer.GitDocGenHook.get_modified_lines</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" compoundref="base__analyzer_8py" startline="13">penify_hook.base_analyzer.BaseAnalyzer.repo_details</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" compoundref="base__analyzer_8py" startline="11">penify_hook.base_analyzer.BaseAnalyzer.repo_path</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" compoundref="base__analyzer_8py" startline="20">penify_hook.base_analyzer.BaseAnalyzer.supported_file_types</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.git_analyzer.GitDocGenHook.run</definition>
+        <argsstring>(self)</argsstring>
+        <name>run</name>
+        <qualifiedname>penify_hook.git_analyzer.GitDocGenHook.run</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Run the post-commit hook.
+
+This method retrieves the list of modified files from the last commit and
+processes each file. It stages any files that have been modified during
+processing and creates an auto-commit if changes were made. A progress bar is
+displayed to indicate the processing status of each file. The method handles
+any exceptions that occur during file processing, printing an error message for
+each file that fails to process. If any modifications are made to the files, an
+auto-commit is created to save those changes.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="134" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="134" bodyend="178"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" compoundref="ui__utils_8py" startline="84" endline="93">penify_hook.ui_utils.create_progress_bar</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" compoundref="git__analyzer_8py" startline="23" endline="31">penify_hook.git_analyzer.GitDocGenHook.get_modified_files_in_last_commit</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" compoundref="ui__utils_8py" startline="68" endline="72">penify_hook.ui_utils.print_processing</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" compoundref="ui__utils_8py" startline="73" endline="83">penify_hook.ui_utils.print_status</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="56" endline="59">penify_hook.ui_utils.print_success</references>
+        <references refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" compoundref="git__analyzer_8py" startline="78" endline="133">penify_hook.git_analyzer.GitDocGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="100">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</references>
+        <references refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" compoundref="base__analyzer_8py" startline="12">penify_hook.base_analyzer.BaseAnalyzer.repo</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="1">
+        <label>penify_hook.git_analyzer.GitDocGenHook</label>
+        <link refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.git_analyzer.GitDocGenHook</label>
+        <link refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+      <node id="2">
+        <label>penify_hook.base_analyzer.BaseAnalyzer</label>
+        <link refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="19" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="19" bodyend="178"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>get_modified_files_in_last_commit</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>get_modified_lines</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>process_file</name></member>
+      <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" prot="public" virt="non-virtual"><scope>penify_hook::git_analyzer::GitDocGenHook</scope><name>run</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml b/docs/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml
new file mode 100644
index 0000000..dde6211
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1jira__client_1_1JiraClient.xml
@@ -0,0 +1,523 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1jira__client_1_1JiraClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::jira_client::JiraClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_url</definition>
+        <argsstring></argsstring>
+        <name>jira_url</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_user</definition>
+        <argsstring></argsstring>
+        <name>jira_user</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_user</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="27" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="27" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_api_token</definition>
+        <argsstring></argsstring>
+        <name>jira_api_token</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_api_token</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="28" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="28" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.jira_client.JiraClient::jira_client</definition>
+        <argsstring></argsstring>
+        <name>jira_client</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.jira_client</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="29" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="29" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="101" endline="114">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="212" endline="294">penify_hook.jira_client.JiraClient.get_detailed_issue_context</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="66" endline="100">penify_hook.jira_client.JiraClient.get_issue_details</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="65">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="103" endline="157">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" compoundref="jira__client_8py" startline="115" endline="156">penify_hook.jira_client.JiraClient.update_issue_status</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.jira_client.JiraClient.__init__</definition>
+        <argsstring>(self, str jira_url=None, str jira_user=None, str jira_api_token=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_url</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_user</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>jira_api_token</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Initialize the JIRA client.
+
+Args:
+    jira_url: Base URL for JIRA instance (e.g., &quot;https://your-domain.atlassian.net&quot;)
+    jira_user: JIRA username or email
+    jira_api_token: JIRA API token
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="17" bodyend="45"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.is_connected</definition>
+        <argsstring>(self)</argsstring>
+        <name>is_connected</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.is_connected</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Check if the JIRA client is connected.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="46" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="46" bodyend="49"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="101" endline="114">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="333" endline="423">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="157" endline="211">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="295" endline="332">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="212" endline="294">penify_hook.jira_client.JiraClient.get_detailed_issue_context</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="66" endline="100">penify_hook.jira_client.JiraClient.get_issue_details</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" compoundref="jira__client_8py" startline="115" endline="156">penify_hook.jira_client.JiraClient.update_issue_status</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>List[str]</type>
+        <definition> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</definition>
+        <argsstring>(self, str branch_name)</argsstring>
+        <name>extract_issue_keys_from_branch</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>branch_name</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extracts unique JIRA issue keys from a branch name.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="50" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="50" bodyend="58"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>List[str]</type>
+        <definition> List[str] penify_hook.jira_client.JiraClient.extract_issue_keys</definition>
+        <argsstring>(self, str text)</argsstring>
+        <name>extract_issue_keys</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.extract_issue_keys</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>text</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Extract unique JIRA issue keys from the given text.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="59" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="59" bodyend="65"/>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="157" endline="211">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Optional[Dict[str, Any]]</type>
+        <definition> Optional[Dict[str, Any]] penify_hook.jira_client.JiraClient.get_issue_details</definition>
+        <argsstring>(self, str issue_key)</argsstring>
+        <name>get_issue_details</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_issue_details</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve details of a JIRA issue based on its key.
+
+This function fetches detailed information about a specified JIRA issue using
+the provided issue key. It first checks if the JIRA client is connected; if
+not, it logs a warning and returns `None`. If connected, it attempts to
+retrieve the issue from the JIRA server. On success, it constructs and returns
+a dictionary containing various details such as the issue&apos;s key, summary,
+status, description, assignee, reporter, type, priority, and URL. Errors during
+this process are logged, and `None` is returned.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="66" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="66" bodyend="100"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="157" endline="211">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="295" endline="332">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.add_comment</definition>
+        <argsstring>(self, str issue_key, str comment)</argsstring>
+        <name>add_comment</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.add_comment</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>comment</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Adds a comment to a JIRA issue.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="101" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="101" bodyend="114"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="101" endline="114">penify_hook.jira_client.JiraClient.add_comment</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" compoundref="jira__client_8py" startline="101" endline="114">penify_hook.jira_client.JiraClient.add_comment</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>bool</type>
+        <definition> bool penify_hook.jira_client.JiraClient.update_issue_status</definition>
+        <argsstring>(self, str issue_key, str transition_name)</argsstring>
+        <name>update_issue_status</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.update_issue_status</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>transition_name</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Update the status of a JIRA issue.
+
+This method checks if the JIRA client is connected, retrieves available
+transitions for the given issue, finds the transition ID by name, and updates
+the issue&apos;s status accordingly. If any step fails or the specified transition
+is not found, appropriate logs are generated, and False is returned.
+
+Args:
+    issue_key (str): The key of the JIRA issue to be updated.
+    transition_name (str): The name of the desired transition.
+
+Returns:
+    bool: True if the status was successfully updated, False otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="115" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="115" bodyend="156"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</definition>
+        <argsstring>(self, str commit_title, str commit_description, List[str] issue_keys=None)</argsstring>
+        <name>format_commit_message_with_jira_info</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>commit_title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>commit_description</declname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format commit message with JIRA issue information.
+
+This function updates the provided commit title and description by
+incorporating JIRA issue keys. If no issue keys are supplied, it extracts them
+from the commit title and description. It then formats the commit title to
+include the first issue key if not already present and appends detailed
+information about each issue to the commit description.
+
+Args:
+    commit_title (str): The original commit title.
+    commit_description (str): The original commit description.
+    issue_keys (List[str]?): A list of JIRA issue keys to include in the commit message. If not
+        provided, issue keys will be extracted from both the title and the description.
+
+Returns:
+    tuple: A tuple containing the updated commit title and description with JIRA
+        information included.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="157" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="157" bodyend="211"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" compoundref="jira__client_8py" startline="59" endline="65">penify_hook.jira_client.JiraClient.extract_issue_keys</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="66" endline="100">penify_hook.jira_client.JiraClient.get_issue_details</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="333" endline="423">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, Any]</type>
+        <definition> Dict[str, Any] penify_hook.jira_client.JiraClient.get_detailed_issue_context</definition>
+        <argsstring>(self, str issue_key)</argsstring>
+        <name>get_detailed_issue_context</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_detailed_issue_context</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>issue_key</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve comprehensive details about a JIRA issue including context for better
+commit messages.
+
+This function fetches detailed information from a specified JIRA issue and
+constructs a dictionary containing various context fields such as the issue
+summary, description, type, status, priority, comments, URL, and additional
+custom fields like acceptance criteria and sprint information. It handles
+errors by logging appropriate warnings or errors.
+
+Args:
+    issue_key (str): The JIRA issue key (e.g., &quot;PROJECT-123&quot;).
+
+Returns:
+    Dict[str, Any]: A dictionary containing business and technical context from the issue.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="212" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="212" bodyend="294"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" compoundref="jira__client_8py" startline="29">penify_hook.jira_client.JiraClient.jira_client</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="295" endline="332">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, Any]</type>
+        <definition> Dict[str, Any] penify_hook.jira_client.JiraClient.get_commit_context_from_issues</definition>
+        <argsstring>(self, List[str] issue_keys)</argsstring>
+        <name>get_commit_context_from_issues</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.get_commit_context_from_issues</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Gather contextual information from JIRA issues to improve commit messages.
+
+This function processes a list of JIRA issue keys, retrieves detailed context
+for each issue, and aggregates it into a dictionary that can be used to enhance
+commit messages. It first retrieves the primary issue (the first key in the
+list) and then gathers basic details for any related issues. The resulting
+context includes information from both the primary and related issues, along
+with all issue keys.
+
+Args:
+    issue_keys: List of JIRA issue keys to gather information from
+
+Returns:
+    Dict containing business and technical context from the issues
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="295" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="295" bodyend="332"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" compoundref="jira__client_8py" startline="212" endline="294">penify_hook.jira_client.JiraClient.get_detailed_issue_context</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" compoundref="jira__client_8py" startline="66" endline="100">penify_hook.jira_client.JiraClient.get_issue_details</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" compoundref="jira__client_8py" startline="333" endline="423">penify_hook.jira_client.JiraClient.enhance_commit_message</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>tuple</type>
+        <definition> tuple penify_hook.jira_client.JiraClient.enhance_commit_message</definition>
+        <argsstring>(self, str title, str description, List[str] issue_keys)</argsstring>
+        <name>enhance_commit_message</name>
+        <qualifiedname>penify_hook.jira_client.JiraClient.enhance_commit_message</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>title</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>description</declname>
+        </param>
+        <param>
+          <type>List</type>
+          <declname>issue_keys</declname>
+          <array>[str]</array>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Enhance a commit message with business and technical context from JIRA issues.
+
+This function first checks if the list of issue keys is empty or if there is no
+connection. If so, it returns the original title and description without
+modification. It then retrieves context information from the specified JIRA
+issues. If the primary issue is missing, it formats the commit message with
+basic JIRA info.  The function enhances the commit title by prefixing it with
+the primary issue key if not already included. It appends a business context
+section to the description, including details like issue type, status,
+priority, sprint, acceptance criteria, and a condensed issue description. If
+comments are available, they are added as technical notes. Finally, related
+issues are listed.
+
+Args:
+    title (str): Original commit title.
+    description (str): Original commit description.
+    issue_keys (List[str]): List of JIRA issue keys to include in the enhanced commit message.
+
+Returns:
+    tuple: A tuple containing the enhanced commit title and description with added
+        context from JIRA issues.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="333" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="333" bodyend="423"/>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" compoundref="jira__client_8py" startline="157" endline="211">penify_hook.jira_client.JiraClient.format_commit_message_with_jira_info</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" compoundref="jira__client_8py" startline="295" endline="332">penify_hook.jira_client.JiraClient.get_commit_context_from_issues</references>
+        <references refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" compoundref="jira__client_8py" startline="46" endline="49">penify_hook.jira_client.JiraClient.is_connected</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>Client for interacting with JIRA API
+</verbatim> </para>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.jira_client.JiraClient</label>
+        <link refid="classpenify__hook_1_1jira__client_1_1JiraClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="12" bodyend="423"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>add_comment</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>enhance_commit_message</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>extract_issue_keys</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>extract_issue_keys_from_branch</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>format_commit_message_with_jira_info</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_commit_context_from_issues</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_detailed_issue_context</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>get_issue_details</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>is_connected</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_api_token</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_client</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_url</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>jira_user</name></member>
+      <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" prot="public" virt="non-virtual"><scope>penify_hook::jira_client::JiraClient</scope><name>update_issue_status</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml b/docs/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml
new file mode 100644
index 0000000..d1e7640
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1llm__client_1_1LLMClient.xml
@@ -0,0 +1,187 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1llm__client_1_1LLMClient" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::llm_client::LLMClient</compoundname>
+      <sectiondef kind="public-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.llm_client.LLMClient::model</definition>
+        <argsstring></argsstring>
+        <name>model</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.model</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="25" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="174">penify_hook.llm_client.LLMClient.generate_commit_summary</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="private-attrib">
+      <memberdef kind="variable" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" prot="private" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook.llm_client.LLMClient::_litellm</definition>
+        <argsstring></argsstring>
+        <name>_litellm</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient._litellm</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="30" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="30" bodyend="-1"/>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" compoundref="llm__client_8py" startline="33" endline="39">penify_hook.llm_client.LLMClient.litellm</referencedby>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.llm_client.LLMClient.__init__</definition>
+        <argsstring>(self, str model=None, str api_base=None, str api_key=None)</argsstring>
+        <name>__init__</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.__init__</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>model</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_base</declname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>api_key</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Initialize the LLM client.
+
+Args:
+    model: LLM model to use (e.g., &quot;gpt-4&quot;, &quot;ollama/llama2&quot;, etc.)
+    api_base: Base URL for API requests (e.g., &quot;http://localhost:11434&quot; for Ollama)
+    api_key: API key for the LLM service
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="15" bodyend="31"/>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.llm_client.LLMClient.litellm</definition>
+        <argsstring>(self)</argsstring>
+        <name>litellm</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.litellm</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Returns the litellm module, loading it if necessary.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="33" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="33" bodyend="39"/>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" compoundref="llm__client_8py" startline="30">penify_hook.llm_client.LLMClient._litellm</references>
+        <referencedby refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" compoundref="llm__client_8py" startline="40" endline="174">penify_hook.llm_client.LLMClient.generate_commit_summary</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict</type>
+        <definition> Dict penify_hook.llm_client.LLMClient.generate_commit_summary</definition>
+        <argsstring>(self, str diff, str message, bool generate_description, Dict repo_details, Dict jira_context=None)</argsstring>
+        <name>generate_commit_summary</name>
+        <qualifiedname>penify_hook.llm_client.LLMClient.generate_commit_summary</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>diff</declname>
+        </param>
+        <param>
+          <type>str</type>
+          <declname>message</declname>
+        </param>
+        <param>
+          <type>bool</type>
+          <declname>generate_description</declname>
+        </param>
+        <param>
+          <type>Dict</type>
+          <declname>repo_details</declname>
+        </param>
+        <param>
+          <type>Dict</type>
+          <declname>jira_context</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a concise and descriptive commit summary based on Git diff, user
+instructions, repository details, and optional JIRA context.
+
+This function constructs a prompt for an LLM to produce a commit title and, if
+requested, a detailed description. The summary adheres to Semantic Commit
+Messages guidelines. If JIRA context is provided, it enriches the prompt with
+relevant issue information.
+
+Args:
+    diff (str): Git diff of changes.
+    message (str): User-provided commit message or instructions.
+    generate_description (bool): Flag indicating whether to include a detailed description in the summary.
+    repo_details (Dict): Details about the repository.
+    jira_context (Dict?): Optional JIRA issue context to enhance the summary.
+
+Returns:
+    Dict: A dictionary containing the title and description for the commit. If
+        `generate_description` is False, the &apos;description&apos; key may be absent.
+
+Raises:
+    ValueError: If the LLM model is not configured.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="40" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="40" bodyend="174"/>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" compoundref="llm__client_8py" startline="33" endline="39">penify_hook.llm_client.LLMClient.litellm</references>
+        <references refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" compoundref="llm__client_8py" startline="25">penify_hook.llm_client.LLMClient.model</references>
+        <referencedby refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" compoundref="api__client_8py" startline="88" endline="97">penify_hook.api_client.APIClient.generate_commit_summary_with_llm</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>Client for interacting with LLM models using LiteLLM.
+</verbatim> </para>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>penify_hook.llm_client.LLMClient</label>
+        <link refid="classpenify__hook_1_1llm__client_1_1LLMClient"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="10" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" bodystart="10" bodyend="174"/>
+    <listofallmembers>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>__init__</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" prot="private" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>_litellm</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>generate_commit_summary</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>litellm</name></member>
+      <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" prot="public" virt="non-virtual"><scope>penify_hook::llm_client::LLMClient</scope><name>model</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml b/docs/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
new file mode 100644
index 0000000..f40e622
--- /dev/null
+++ b/docs/xml/classpenify__hook_1_1utils_1_1GitRepoNotFoundError.xml
@@ -0,0 +1,38 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kind="class" language="Python" prot="public">
+    <compoundname>penify_hook::utils::GitRepoNotFoundError</compoundname>
+    <basecompoundref refid="classException" prot="public" virt="non-virtual">Exception</basecompoundref>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <inheritancegraph>
+      <node id="2">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="1">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+    </inheritancegraph>
+    <collaborationgraph>
+      <node id="2">
+        <label>Exception</label>
+        <link refid="classException"/>
+      </node>
+      <node id="1">
+        <label>penify_hook.utils.GitRepoNotFoundError</label>
+        <link refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError"/>
+        <childnode refid="2" relation="public-inheritance">
+        </childnode>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="9" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="9" bodyend="12"/>
+    <listofallmembers>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml b/docs/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
new file mode 100644
index 0000000..fd6cd22
--- /dev/null
+++ b/docs/xml/classtests_1_1test__commit__commands_1_1TestCommitCommands.xml
@@ -0,0 +1,551 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__commit__commands_1_1TestCommitCommands" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_commit_commands::TestCommitCommands</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_api_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_api_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_api_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks an instance of APIClient using unittest.mock.
+
+This function creates a mock object for APIClient and yields it along
+with the mocked instance. It is useful for testing purposes where real
+API calls should be avoided.
+
+Yields:
+    tuple: A tuple containing the mock of APIClient and the mocked instance of
+        APIClient.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="11" bodyend="27"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_llm_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_llm_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_llm_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mock an instance of LLMClient for testing purposes.
+
+This function yields a mock object representing an instance of
+LLMClient, which can be used to simulate interactions with a language
+model during testing. The mock is patched to replace the actual
+LLMClient class from the penify_hook module.
+
+Yields:
+    tuple: A tuple containing two elements:
+        - mock (MagicMock): The mock object for LLMClient.
+        - llm_client_instance (MagicMock): An instance of the mocked LLMClient.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="29" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="29" bodyend="47"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_jira_client</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_jira_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_jira_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a mock JIRA client for testing purposes.
+
+This function yields a tuple containing a mock JIRA client instance and
+its `is_connected` method. The mock client is configured to simulate an
+active connection. This is useful for unit tests that require
+interaction with a JIRA client without making actual network calls.
+
+Yields:
+    tuple: A tuple containing the mocked JIRA client instance and its
+        `is_connected` method.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="49" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="49" bodyend="67"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_commit_doc_gen</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_commit_doc_gen</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks the CommitDocGenHook class and returns a MagicMock instance.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to create a mock of the `CommitDocGenHook` class. It then sets up this
+mock to return a new `MagicMock` instance when invoked. The function
+yields both the mock object and the mocked instance, allowing for easy
+testing of functions that rely on `CommitDocGenHook`.
+
+Returns:
+    tuple: A tuple containing two elements:
+        - mock (patch): The patch object used to mock the `CommitDocGenHook`
+        class.
+        - doc_gen_instance (MagicMock): The mocked instance of
+        `CommitDocGenHook`.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="69" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="69" bodyend="90"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_git_folder_search</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_git_folder_search</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_git_folder_search</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mock the `recursive_search_git_folder` function to return a predefined
+git folder path.
+
+This function uses the `patch` decorator from the `unittest.mock` module
+to intercept calls to `penify_hook.utils.recursive_search_git_folder`.
+When called, it will return &apos;/mock/git/folder&apos; instead of performing an
+actual search. This is useful for testing purposes where you need a
+consistent response without interacting with the file system.
+
+Yields:
+    MagicMock: A mock object that simulates the `recursive_search_git_folder` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="92" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="92" bodyend="109"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.mock_print_functions</definition>
+        <argsstring>(self)</argsstring>
+        <name>mock_print_functions</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.mock_print_functions</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Mocks the print functions from `penify_hook.ui_utils` for testing
+purposes.
+
+This function uses Python&apos;s `unittest.mock.patch` to replace the actual
+print functions (`print`, `print_warning`, and `print_error`) with mock
+objects. These mock objects can be used in tests to capture calls made
+to these print functions without actually printing anything.
+
+Yields:
+    tuple: A tuple containing three mock objects corresponding to `print_info`,
+        `print_warning`,
+        and `print_error`.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="111" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="111" bodyend="130"/>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_llm_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_llm_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref></type>
+          <defname>mock_llm_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test committing code using an LLM client.
+
+This function sets up mock objects for various components and then calls
+the `commit_code` function with specified parameters. It verifies that
+the correct mocks are created and called with the appropriate arguments.
+
+Args:
+    mock_error (MagicMock): Mock object for error handling.
+    mock_warning (MagicMock): Mock object for warning logging.
+    mock_info (MagicMock): Mock object for info logging.
+    mock_git_folder_search (MagicMock): Mock object to simulate git folder search.
+    mock_doc_gen (MagicMock): Mock object for document generation.
+    mock_llm_client (MagicMock): Mock object for LLM client interaction.
+    mock_api_client (MagicMock): Mock object for API client interaction.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="138" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="140" bodyend="190"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_jira_client, mock_llm_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_jira_client</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref></type>
+          <defname>mock_jira_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref></type>
+          <defname>mock_llm_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test committing code using a JIRA client.
+
+This function tests the commit_code function with various parameters,
+including API and JIRA credentials. It sets up mock objects for
+dependencies such as the JIRA client, LLM client, and doc generator to
+simulate the behavior of the real classes. The function then calls
+commit_code and verifies that the JIRA client and doc generator are
+called with the correct parameters.
+
+Args:
+    mock_error (MagicMock): A MagicMock object for simulating error logging.
+    mock_warning (MagicMock): A MagicMock object for simulating warning logging.
+    mock_info (MagicMock): A MagicMock object for simulating info logging.
+    mock_git_folder_search (MagicMock): A MagicMock object for simulating the git folder search function.
+    mock_doc_gen (MagicMock): A MagicMock object for simulating the doc generator function.
+    mock_jira_client (MagicMock): A MagicMock object for simulating the JIRA client class.
+    mock_llm_client (MagicMock): A MagicMock object for simulating the LLM client class.
+    mock_api_client (MagicMock): A MagicMock object for simulating the API client class.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="199" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="201" bodyend="260"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</definition>
+        <argsstring>(self, mock_error, mock_warning, mock_info, mock_git_folder_search, mock_doc_gen, mock_jira_client, mock_api_client)</argsstring>
+        <name>test_commit_code_with_jira_connection_failure</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_error</type>
+          <defname>mock_error</defname>
+        </param>
+        <param>
+          <type>mock_warning</type>
+          <defname>mock_warning</defname>
+        </param>
+        <param>
+          <type>mock_info</type>
+          <defname>mock_info</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref></type>
+          <defname>mock_jira_client</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the commit_code function when JIRA connection fails.
+
+This function tests the scenario where the JIRA connection fails during
+a code commit. It sets up various mocks to simulate different components
+of the system and then calls the `commit_code` function with specific
+parameters. The function is expected to handle the JIRA connection
+failure gracefully by logging an appropriate warning.
+
+Args:
+    mock_error (MagicMock): Mock for error logging.
+    mock_warning (MagicMock): Mock for warning logging.
+    mock_info (MagicMock): Mock for info logging.
+    mock_git_folder_search (MagicMock): Mock for searching the Git folder.
+    mock_doc_gen (MagicMock): Mock for generating documentation.
+    mock_jira_client (MagicMock): Mock for creating a JIRA client.
+    mock_api_client (MagicMock): Mock for creating an API client.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="268" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="270" bodyend="317"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</definition>
+        <argsstring>(self, mock_print, mock_exit, mock_git_folder_search, mock_doc_gen, mock_api_client)</argsstring>
+        <name>test_commit_code_error_handling</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref></type>
+          <defname>mock_git_folder_search</defname>
+        </param>
+        <param>
+          <type>mock_doc_gen</type>
+          <defname>mock_doc_gen</defname>
+        </param>
+        <param>
+          <type><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref></type>
+          <defname>mock_api_client</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the error handling in the test_commit_code function.
+
+This function sets up mocks to simulate exceptions and test the error
+handling of the commit_code function. It verifies that the function
+correctly prints an error message and exits with a status code of 1 when
+an exception occurs during documentation generation.
+
+Args:
+    mock_print (MagicMock): Mock for the print function, used to verify error message output.
+    mock_exit (MagicMock): Mock for the sys.exit function, used to verify exit behavior.
+    mock_git_folder_search (MagicMock): Mock for the git_folder_search function, returning a mock Git folder
+        path.
+    mock_doc_gen (MagicMock): Mock for the doc_gen function, simulating an exception during
+        documentation generation.
+    mock_api_client (MagicMock): Mock for the API client class, not directly used but referenced in the
+        function signature.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="323" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="324" bodyend="358"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</definition>
+        <argsstring>(self)</argsstring>
+        <name>test_setup_commit_parser</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up the argument parser for the commit command.
+
+This function configures an argument parser to handle various options
+for committing changes. It adds three arguments: - &apos;-m&apos; or &apos;--message&apos;:
+An optional argument to specify a contextual commit message with a
+default value of &quot;N/A&quot;. - &apos;-e&apos; or &apos;--terminal&apos;: A boolean flag to open
+an edit terminal before committing. - &apos;-d&apos; or &apos;--description&apos;: A boolean
+flag that, when set to False, indicates the generation of a commit
+message with title and description.
+
+Args:
+    parser (MagicMock): The argument parser to be configured.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="359" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="359" bodyend="382"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" compoundref="commit__commands_8py" startline="98" endline="115">penify_hook.commands.commit_commands.setup_commit_parser</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_commit_commands.TestCommitCommands.test_handle_commit</definition>
+        <argsstring>(self, mock_print_info, mock_commit_code, mock_get_token, mock_get_llm_config, mock_get_jira_config)</argsstring>
+        <name>test_handle_commit</name>
+        <qualifiedname>tests.test_commit_commands.TestCommitCommands.test_handle_commit</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print_info</type>
+          <defname>mock_print_info</defname>
+        </param>
+        <param>
+          <type>mock_commit_code</type>
+          <defname>mock_commit_code</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_get_llm_config</type>
+          <defname>mock_get_llm_config</defname>
+        </param>
+        <param>
+          <type>mock_get_jira_config</type>
+          <defname>mock_get_jira_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the handle_commit function with various mock objects.
+
+This function sets up mocks for retrieving LLM configuration, JIRA
+configuration, and commit code. It then creates an argument object and
+calls the handle_commit function. Finally, it verifies that the mock
+functions were called with the expected arguments.
+
+Args:
+    mock_print_info (MagicMock): Mock object for printing information.
+    mock_commit_code (MagicMock): Mock object for committing code.
+    mock_get_token (MagicMock): Mock object for retrieving API token.
+    mock_get_llm_config (MagicMock): Mock object for retrieving LLM configuration.
+    mock_get_jira_config (MagicMock): Mock object for retrieving JIRA configuration.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="389" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="390" bodyend="435"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_commit_commands.TestCommitCommands</label>
+        <link refid="classtests_1_1test__commit__commands_1_1TestCommitCommands"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" bodystart="8" bodyend="435"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_api_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_commit_doc_gen</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_git_folder_search</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_jira_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_llm_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>mock_print_functions</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_error_handling</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_jira_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_jira_connection_failure</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_commit_code_with_llm_client</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_handle_commit</name></member>
+      <member refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" prot="public" virt="non-virtual"><scope>tests::test_commit_commands::TestCommitCommands</scope><name>test_setup_commit_parser</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml b/docs/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
new file mode 100644
index 0000000..68175a0
--- /dev/null
+++ b/docs/xml/classtests_1_1test__config__commands_1_1TestConfigCommands.xml
@@ -0,0 +1,578 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__config__commands_1_1TestConfigCommands" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_config_commands::TestConfigCommands</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</definition>
+        <argsstring>(self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</argsstring>
+        <name>test_get_penify_config_existing_dir</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_makedirs</type>
+          <defname>mock_makedirs</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_git_folder</type>
+          <defname>mock_git_folder</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_penify_config function when the .penify config directory
+exists.
+
+It should not create a new directory and assert that all mocked
+functions were called correctly.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the open() function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the os.makedirs() function.
+    mock_path (MagicMock): A MagicMock object simulating the Path class from pathlib module.
+    mock_git_folder (MagicMock): A MagicMock object simulating the git_folder_search() function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="22" bodyend="55"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="66" endline="94">penify_hook.commands.config_commands.get_penify_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</definition>
+        <argsstring>(self, mock_file_open, mock_makedirs, mock_path, mock_git_folder)</argsstring>
+        <name>test_get_penify_config_new_dir</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_makedirs</type>
+          <defname>mock_makedirs</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_git_folder</type>
+          <defname>mock_git_folder</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of get_penify_config when the .penify directory does
+not exist.
+
+This function mocks various system calls to simulate a scenario where
+the .penify directory is not present. It then asserts that the
+appropriate actions are taken to create the directory and write an empty
+JSON file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the `open` function.
+    mock_makedirs (MagicMock): A MagicMock object simulating the `os.makedirs` function.
+    mock_path (MagicMock): A MagicMock object simulating the `Path` class from `pathlib`.
+    mock_git_folder (MagicMock): A MagicMock object simulating a git folder search function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="60" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="60" bodyend="94"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="66" endline="94">penify_hook.commands.config_commands.get_penify_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_exists</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_llm_config function when the configuration file exists.
+
+This function sets up a mock configuration file that exists and returns
+it when called. It then calls the get_llm_config function and asserts
+that it returns the correct configuration dictionary. Additionally, it
+checks that the mock_file_open function was called with the correct
+arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the open() function.
+    mock_get_config (MagicMock): A mock for the get_config() function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="97" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="97" bodyend="126"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_empty</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of get_llm_config when called with an empty
+configuration file.
+
+This function sets up a mock configuration file that exists but returns
+no content. It then calls the `get_llm_config` function and asserts that
+it returns an empty dictionary and that the file open method was called
+exactly once with the correct arguments.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object simulating the built-in open function.
+    mock_get_config (MagicMock): A MagicMock object simulating the get_config function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="129" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="129" bodyend="154"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</definition>
+        <argsstring>(self, mock_print, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_llm_config_invalid_json</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to verify the behavior of get_llm_config when reading an
+invalid JSON file.
+
+It sets up a mock configuration file that exists but contains invalid
+JSON. The function is expected to handle this gracefully by printing an
+error message and returning an empty dictionary.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_get_config (MagicMock): Mock for the get_config function, which returns the mock configuration
+        file.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="158" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="158" bodyend="185"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</definition>
+        <argsstring>(self, mock_file_open, mock_get_config)</argsstring>
+        <name>test_get_jira_config_exists</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test that get_jira_config returns the correct JIRA configuration when
+the configuration file exists.
+
+It sets up a mock for the configuration file to simulate its existence
+and verifies that the function reads from the correct file and returns
+the expected JIRA configuration dictionary. Additionally, it checks that
+the mock file open is called with the appropriate arguments.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_get_config (MagicMock): A mock for the `get_config` function, which is expected to return a mock
+        configuration file object.
+
+Returns:
+    None: This test function does not explicitly return anything. Its assertions
+        serve as the verification of its correctness.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="188" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="188" bodyend="222"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="256" endline="274">penify_hook.commands.config_commands.get_jira_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</definition>
+        <argsstring>(self, mock_print, mock_json_dump, mock_file_open, mock_get_config)</argsstring>
+        <name>test_save_llm_config_success</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_json_dump</type>
+          <defname>mock_json_dump</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the save_llm_config function successfully.
+
+This function tests that the save_llm_config function correctly saves an
+LLM configuration and handles various mock objects and side effects. It
+ensures that the function returns True upon successful execution, writes
+the expected configuration to a file, and prints a confirmation message.
+
+Args:
+    mock_print (MagicMock): A mock object for the print function.
+    mock_json_dump (MagicMock): A mock object for json.dump.
+    mock_file_open (MagicMock): A mock object for file opening.
+    mock_get_config (MagicMock): A mock object to return a configuration file mock.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="227" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="227" bodyend="265"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="100" endline="166">penify_hook.commands.config_commands.save_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</definition>
+        <argsstring>(self, mock_print, mock_file_open, mock_get_config)</argsstring>
+        <name>test_save_llm_config_failure</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_get_config</type>
+          <defname>mock_get_config</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to verify that the save_llm_config function returns False
+and prints an error message when it fails to save the LLM configuration
+due to a permission error.
+
+It sets up a mock configuration file that exists and calls the
+save_llm_config function with valid parameters. The function is expected
+to return False and print &quot;Error saving LLM configuration: Permission
+denied&quot; in case of a failure.
+
+Args:
+    self (TestLLMConfig): An instance of the test class.
+    mock_print (MagicMock): A MagicMock object representing the print function, which will be used
+        to assert that it was called with the expected error message.
+    mock_file_open (MagicMock): A MagicMock object representing the open function, which is not used in
+        this test but is included as a parameter for completeness.
+    mock_get_config (MagicMock): A MagicMock object representing the get_config function, which will be
+        used to return the mock configuration file.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="269" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="269" bodyend="300"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="100" endline="166">penify_hook.commands.config_commands.save_llm_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</definition>
+        <argsstring>(self, mock_print, mock_json_dump, mock_file_open, mock_path)</argsstring>
+        <name>test_save_jira_config_success</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_print</type>
+          <defname>mock_print</defname>
+        </param>
+        <param>
+          <type>mock_json_dump</type>
+          <defname>mock_json_dump</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the save_jira_config function to ensure it saves JIRA configuration
+successfully.
+
+This function sets up mocks for various dependencies and tests the
+functionality of saving a JIRA configuration. It asserts that the
+function returns `True`, the JSON dump is called with the correct
+configuration, and the print statement contains the expected message.
+
+Args:
+    mock_print (MagicMock): Mock for the print function.
+    mock_json_dump (MagicMock): Mock for the json.dump function.
+    mock_file_open (MagicMock): Mock for the open function.
+    mock_path (MagicMock): Mock for the path module.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="305" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="305" bodyend="345"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="167" endline="236">penify_hook.commands.config_commands.save_jira_config</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_from_env</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_from_env</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_from_env</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test retrieving a token from the environment variable.
+
+This function tests the behavior of `get_token` when an environment
+variable is set. It verifies that if the &apos;PENIFY_API_TOKEN&apos; environment
+variable exists, the function returns its value without attempting to
+read a file.
+
+Args:
+    mock_file_open (MagicMock): A MagicMock object for simulating file operations.
+    mock_path (MagicMock): A MagicMock object for simulating path operations.
+    mock_getenv (MagicMock): A MagicMock object for simulating environment variable retrieval.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="349" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="349" bodyend="374"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_from_config</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_from_config</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_from_config</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test retrieving a token from the configuration.
+
+This function sets up mocks for environment variables and configuration
+files, calls the `get_token` function, and asserts its behavior. It
+verifies that when the environment variable is not found, the function
+reads a token from a configuration file located in the user&apos;s home
+directory.
+
+Args:
+    mock_file_open (MagicMock): A mock for the `open` function.
+    mock_path (MagicMock): A mock for the `pathlib.Path` class.
+    mock_getenv (MagicMock): A mock for the `os.getenv` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="378" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="378" bodyend="409"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_config_commands.TestConfigCommands.test_get_token_not_found</definition>
+        <argsstring>(self, mock_file_open, mock_path, mock_getenv)</argsstring>
+        <name>test_get_token_not_found</name>
+        <qualifiedname>tests.test_config_commands.TestConfigCommands.test_get_token_not_found</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_file_open</type>
+          <defname>mock_file_open</defname>
+        </param>
+        <param>
+          <type>mock_path</type>
+          <defname>mock_path</defname>
+        </param>
+        <param>
+          <type>mock_getenv</type>
+          <defname>mock_getenv</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the get_token function when the API token environment variable is
+not found.
+
+This function tests the scenario where the `PENIFY_API_TOKEN`
+environment variable is not set. It mocks the environment variable to
+return `None`, and verifies that the function returns `None`. The test
+also checks that the environment variable is accessed once and that a
+file open operation is attempted on a configuration file located in the
+user&apos;s home directory.
+
+Args:
+    mock_file_open (MagicMock): Mock for the built-in `open` function.
+    mock_path (MagicMock): Mock for the `pathlib.Path` module.
+    mock_getenv (MagicMock): Mock for the `os.getenv` function.
+
+Returns:
+    None: The function does not return anything; it asserts conditions to verify
+        correctness.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="413" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="413" bodyend="450"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_config_commands.TestConfigCommands</label>
+        <link refid="classtests_1_1test__config__commands_1_1TestConfigCommands"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="16" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" bodystart="16" bodyend="450"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_jira_config_exists</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_empty</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_exists</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_llm_config_invalid_json</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_penify_config_existing_dir</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_penify_config_new_dir</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_from_config</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_from_env</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_get_token_not_found</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_jira_config_success</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_llm_config_failure</name></member>
+      <member refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" prot="public" virt="non-virtual"><scope>tests::test_config_commands::TestConfigCommands</scope><name>test_save_llm_config_success</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml b/docs/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml
new file mode 100644
index 0000000..e73b0c9
--- /dev/null
+++ b/docs/xml/classtests_1_1test__web__config_1_1TestWebConfig.xml
@@ -0,0 +1,112 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="classtests_1_1test__web__config_1_1TestWebConfig" kind="class" language="Python" prot="public">
+    <compoundname>tests::test_web_config::TestWebConfig</compoundname>
+      <sectiondef kind="public-func">
+      <memberdef kind="function" id="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</definition>
+        <argsstring>(self, mock_resource_filename, mock_server, mock_webbrowser)</argsstring>
+        <name>test_config_llm_web_server_setup</name>
+        <qualifiedname>tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_resource_filename</type>
+          <defname>mock_resource_filename</defname>
+        </param>
+        <param>
+          <type>mock_server</type>
+          <defname>mock_server</defname>
+        </param>
+        <param>
+          <type>mock_webbrowser</type>
+          <defname>mock_webbrowser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up and test the web server configuration for an LLM (Large Language
+Model) web interface.
+
+This function configures a mock web server for testing purposes,
+including setting up resource filenames, mocking server behavior, and
+verifying that the web browser is opened and the server starts
+correctly. The function uses various mocks to simulate external
+dependencies such as `resource_filename` and `server`.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object simulating the context manager for the web server.
+    mock_webbrowser (MagicMock): A MagicMock object simulating the `webbrowser` module.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="18" bodyend="55"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" compoundref="config__commands_8py" startline="275" endline="380">penify_hook.commands.config_commands.config_llm_web</references>
+      </memberdef>
+      <memberdef kind="function" id="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</definition>
+        <argsstring>(self, mock_resource_filename, mock_server, mock_webbrowser)</argsstring>
+        <name>test_config_jira_web_server_setup</name>
+        <qualifiedname>tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</qualifiedname>
+        <param>
+          <type>self</type>
+          <defname>self</defname>
+        </param>
+        <param>
+          <type>mock_resource_filename</type>
+          <defname>mock_resource_filename</defname>
+        </param>
+        <param>
+          <type>mock_server</type>
+          <defname>mock_server</defname>
+        </param>
+        <param>
+          <type>mock_webbrowser</type>
+          <defname>mock_webbrowser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the configuration and setup of a JIRA web server.
+
+This function tests the entire process of setting up a JIRA web server,
+including mocking necessary resources, configuring the server to shut
+down after handling one request, and verifying that the web browser is
+opened with the correct URL. The function uses several mocks to simulate
+external dependencies such as resource files, servers, and web browsers.
+
+Args:
+    mock_resource_filename (MagicMock): A MagicMock object for simulating the `resource_filename` function.
+    mock_server (MagicMock): A MagicMock object for simulating the server setup.
+    mock_webbrowser (MagicMock): A MagicMock object for simulating the web browser opening.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="59" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="59" bodyend="95"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="381" endline="489">penify_hook.commands.config_commands.config_jira_web</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <collaborationgraph>
+      <node id="1">
+        <label>tests.test_web_config.TestWebConfig</label>
+        <link refid="classtests_1_1test__web__config_1_1TestWebConfig"/>
+      </node>
+    </collaborationgraph>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="13" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" bodystart="13" bodyend="95"/>
+    <listofallmembers>
+      <member refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" prot="public" virt="non-virtual"><scope>tests::test_web_config::TestWebConfig</scope><name>test_config_jira_web_server_setup</name></member>
+      <member refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" prot="public" virt="non-virtual"><scope>tests::test_web_config::TestWebConfig</scope><name>test_config_llm_web_server_setup</name></member>
+    </listofallmembers>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/combine.xslt b/docs/xml/combine.xslt
new file mode 100644
index 0000000..3bfa82c
--- /dev/null
+++ b/docs/xml/combine.xslt
@@ -0,0 +1,15 @@
+<!-- XSLT script to combine the generated output into a single file. 
+     If you have xsltproc you could use:
+     xsltproc combine.xslt index.xml >all.xml
+-->
+<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform" version="1.0">
+  <xsl:output method="xml" version="1.0" indent="no" standalone="yes" />
+  <xsl:template match="/">
+    <doxygen version="{doxygenindex/@version}" xml:lang="{doxygenindex/@xml:lang}">
+      <!-- Load all doxygen generated xml files -->
+      <xsl:for-each select="doxygenindex/compound">
+        <xsl:copy-of select="document( concat( @refid, '.xml' ) )/doxygen/*" />
+      </xsl:for-each>
+    </doxygen>
+  </xsl:template>
+</xsl:stylesheet>
diff --git a/docs/xml/commit-commands_8md.xml b/docs/xml/commit-commands_8md.xml
new file mode 100644
index 0000000..4ff7b63
--- /dev/null
+++ b/docs/xml/commit-commands_8md.xml
@@ -0,0 +1,174 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit-commands_8md" kind="file" language="Markdown">
+    <compoundname>commit-commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Commit<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>allows<sp/>you<sp/>to<sp/>generate<sp/>smart,<sp/>AI-powered<sp/>commit<sp/>messages<sp/>for<sp/>your<sp/>Git<sp/>changes.<sp/>This<sp/>document<sp/>explains<sp/>all<sp/>available<sp/>options<sp/>and<sp/>combinations.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>this<sp/>command:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Analyzes<sp/>your<sp/>staged<sp/>Git<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Generates<sp/>a<sp/>concise<sp/>commit<sp/>title<sp/>only</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Uses<sp/>local<sp/>LLM<sp/>if<sp/>configured,<sp/>or<sp/>falls<sp/>back<sp/>to<sp/>Penify<sp/>API</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Options</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-m,<sp/>--message`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Provide<sp/>context<sp/>for<sp/>the<sp/>commit<sp/>message<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>flow&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>hint<sp/>helps<sp/>the<sp/>AI<sp/>understand<sp/>your<sp/>intention<sp/>and<sp/>improves<sp/>the<sp/>quality<sp/>of<sp/>the<sp/>generated<sp/>message.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-e,<sp/>--terminal`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Open<sp/>an<sp/>editor<sp/>to<sp/>review<sp/>and<sp/>edit<sp/>the<sp/>generated<sp/>commit<sp/>message<sp/>before<sp/>committing:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>your<sp/>default<sp/>Git<sp/>editor<sp/>with<sp/>the<sp/>generated<sp/>message<sp/>for<sp/>review.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-d,<sp/>--description`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Without<sp/>this<sp/>flag,<sp/>only<sp/>the<sp/>commit<sp/>title<sp/>is<sp/>generated.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Option<sp/>Combinations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>combine<sp/>these<sp/>options<sp/>for<sp/>different<sp/>workflows:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Title<sp/>Only<sp/>with<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Title<sp/>and<sp/>Description<sp/>with<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>and<sp/>Edit<sp/>Full<sp/>Commit<sp/>Message</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-d<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate,<sp/>Edit,<sp/>and<sp/>Provide<sp/>Context</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Refactor<sp/>authentication&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>LLM<sp/>and<sp/>JIRA<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Using<sp/>Local<sp/>LLM</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you&apos;ve<sp/>configured<sp/>a<sp/>local<sp/>LLM<sp/>using<sp/>`penify<sp/>config<sp/>llm`,<sp/>the<sp/>commit<sp/>command<sp/>will<sp/>automatically<sp/>use<sp/>it<sp/>for<sp/>message<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Benefits:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Privacy:<sp/>your<sp/>code<sp/>changes<sp/>don&apos;t<sp/>leave<sp/>your<sp/>machine</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Speed:<sp/>no<sp/>network<sp/>latency</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Works<sp/>offline</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>JIRA<sp/>Enhancement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you&apos;ve<sp/>configured<sp/>JIRA<sp/>integration<sp/>using<sp/>`penify<sp/>config<sp/>jira`,<sp/>the<sp/>commit<sp/>command<sp/>will:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Detect<sp/>JIRA<sp/>issue<sp/>references<sp/>in<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Fetch<sp/>issue<sp/>details<sp/>from<sp/>your<sp/>JIRA<sp/>instance</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Include<sp/>issue<sp/>information<sp/>in<sp/>the<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Format<sp/>the<sp/>commit<sp/>message<sp/>according<sp/>to<sp/>JIRA&apos;s<sp/>smart<sp/>commit<sp/>format</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example<sp/>output:</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">PROJ-123:<sp/>Fix<sp/>authentication<sp/>bug<sp/>in<sp/>login<sp/>flow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Updated<sp/>OAuth<sp/>token<sp/>validation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Fixed<sp/>session<sp/>timeout<sp/>handling</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Added<sp/>unit<sp/>tests<sp/>for<sp/>edge<sp/>cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">[PROJ-123]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Requirements</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>the<sp/>`commit`<sp/>command<sp/>to<sp/>work:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>You<sp/>must<sp/>have<sp/>configured<sp/>either:</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Local<sp/>LLM<sp/>via<sp/>`penify<sp/>config<sp/>llm`,<sp/>OR</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Logged<sp/>in<sp/>via<sp/>`penify<sp/>login`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>For<sp/>JIRA<sp/>enhancement<sp/>(optional):</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Configure<sp/>JIRA<sp/>via<sp/>`penify<sp/>config<sp/>jira`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Examples</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Basic<sp/>Commit<sp/>with<sp/>Default<sp/>Settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Commit<sp/>with<sp/>the<sp/>generated<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>-m<sp/>&quot;Generated<sp/>message<sp/>here&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Full<sp/>Workflow<sp/>with<sp/>All<sp/>Features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>integration,<sp/></highlight></codeline>
+<codeline><highlight class="normal">#<sp/>provide<sp/>context,<sp/>and<sp/>open<sp/>editor<sp/>for<sp/>review</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>issue&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>The<sp/>commit<sp/>is<sp/>automatically<sp/>completed<sp/>after<sp/>you<sp/>save<sp/>and<sp/>exit<sp/>the<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;No<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token<sp/>provided&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>config<sp/>llm`<sp/>to<sp/>configure<sp/>a<sp/>local<sp/>LLM,<sp/>or</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>login`<sp/>to<sp/>authenticate<sp/>with<sp/>Penify</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>your<sp/>JIRA<sp/>configuration<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>your<sp/>network<sp/>connection</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>JIRA<sp/>credentials<sp/>are<sp/>valid</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Error<sp/>initializing<sp/>LLM<sp/>client&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>your<sp/>LLM<sp/>configuration<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>the<sp/>LLM<sp/>API<sp/>is<sp/>accessible</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/commit__analyzer_8py.xml b/docs/xml/commit__analyzer_8py.xml
new file mode 100644
index 0000000..280aa69
--- /dev/null
+++ b/docs/xml/commit__analyzer_8py.xml
@@ -0,0 +1,188 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit__analyzer_8py" kind="file" language="Python">
+    <compoundname>commit_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public">penify_hook::commit_analyzer::CommitDocGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commit__analyzer">penify_hook::commit_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commit__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>subprocess</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tempfile</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Optional,<sp/>List</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1jira__client" kindref="compound">penify_hook.jira_client</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_success,<sp/>print_warning</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" kindref="compound">CommitDocGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="15" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" kindref="member">__init__</ref>(self,<sp/>repo_path:<sp/>str,<sp/>api_client:<sp/>APIClient,<sp/>llm_client=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_client=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" kindref="member">__init__</ref>(repo_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref><sp/>=<sp/>llm_client<sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>LLM<sp/>client<sp/>as<sp/>an<sp/>optional<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.jira_client:<sp/>JiraClient<sp/>=<sp/>jira_client<sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>client<sp/>as<sp/>an<sp/>optional<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight></codeline>
+<codeline lineno="21" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" kindref="member">get_summary</ref>(self,<sp/>instruction:<sp/>str,<sp/>generate_description:<sp/>bool)<sp/>-&gt;<sp/>dict:</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>summary<sp/>for<sp/>the<sp/>commit<sp/>based<sp/>on<sp/>the<sp/>staged<sp/>changes.</highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>retrieves<sp/>the<sp/>differences<sp/>of<sp/>the<sp/>staged<sp/>changes<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>repository</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>commit<sp/>summary<sp/>using<sp/>the<sp/>provided<sp/>instruction.<sp/>If<sp/>there<sp/>are<sp/>no</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changes<sp/>staged<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>commit,<sp/>an<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>raised.<sp/>If<sp/>a<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>connected,<sp/>it<sp/>will<sp/>attempt<sp/>to<sp/>extract<sp/>issue<sp/>keys<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>branch<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>use<sp/>them<sp/>to<sp/>fetch<sp/>context.<sp/>The<sp/>summary<sp/>can<sp/>be<sp/>generated<sp/>either<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>Language</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Model<sp/>(LLM)<sp/>client<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>through<sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instruction<sp/>(str):<sp/>A<sp/>string<sp/>containing<sp/>instructions<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>the<sp/>commit<sp/>summary.</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Whether<sp/>to<sp/>include<sp/>detailed<sp/>descriptions<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ValueError:<sp/>If<sp/>there<sp/>are<sp/>no<sp/>changes<sp/>staged<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>commit.</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="38"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.diff(&apos;--cached&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>diff:</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>to<sp/>commit&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>self.jira_client.is_connected():</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>branch<sp/>name<sp/>for<sp/>JIRA<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_branch<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.active_branch.name</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys_from_branch(current_branch)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>issues<sp/>found<sp/>in<sp/>branch,<sp/>get<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>=<sp/>self.jira_client.get_commit_context_from_issues(issue_keys)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>get<sp/>JIRA<sp/>context:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Use<sp/>LLM<sp/>client<sp/>if<sp/>provided,<sp/>otherwise<sp/>use<sp/>API<sp/>client</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Fetching<sp/>commit<sp/>summary<sp/>from<sp/>LLM...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref>:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.generate_commit_summary_with_llm(</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff,<sp/>instruction,<sp/>generate_description,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>,<sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kindref="member">llm_client</ref>,<sp/>jira_context</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.generate_commit_summary(diff,<sp/>instruction,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>,<sp/>jira_context)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="66" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" kindref="member">run</ref>(self,<sp/>msg:<sp/>Optional[str],<sp/>edit_commit_message:<sp/>bool,<sp/>generate_description:<sp/>bool):</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook.</highlight></codeline>
+<codeline lineno="68"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>processes<sp/>the<sp/>modified<sp/>files<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit,<sp/>stages<sp/>them,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>creates<sp/>an<sp/>auto-commit<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>optional<sp/>message.<sp/>It<sp/>also<sp/>handles<sp/>JIRA</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>integration<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>available.<sp/>If<sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>generating<sp/>the<sp/>commit<sp/>summary,</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>raised.</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>msg<sp/>(Optional[str]):<sp/>An<sp/>optional<sp/>message<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit.</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>edit_commit_message<sp/>(bool):<sp/>A<sp/>flag<sp/>indicating<sp/>whether<sp/>to<sp/>open<sp/>the<sp/>git<sp/>commit</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>edit<sp/>terminal<sp/>after<sp/>committing.</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>A<sp/>flag<sp/>indicating<sp/>whether<sp/>to<sp/>include<sp/>a<sp/>description</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="81"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>summary:<sp/>dict<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" kindref="member">get_summary</ref>(msg,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>summary:</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>=<sp/>summary.get(</highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>summary.get(</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>JIRA<sp/>client<sp/>is<sp/>available,<sp/>integrate<sp/>JIRA<sp/>information</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>self.jira_client.is_connected():</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>information<sp/>to<sp/>commit<sp/>message</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" kindref="member">process_jira_integration</ref>(title,<sp/>description,<sp/>msg)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>commit<sp/>the<sp/>changes<sp/>to<sp/>the<sp/>repository<sp/>with<sp/>above<sp/>details</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_msg<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{title}\n\n{description}&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>title</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.commit(</highlight><highlight class="stringliteral">&apos;-m&apos;</highlight><highlight class="normal">,<sp/>commit_msg)</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;Commit:<sp/>{commit_msg}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>edit_commit_message:</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Open<sp/>the<sp/>git<sp/>commit<sp/>edit<sp/>terminal</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Opening<sp/>git<sp/>commit<sp/>edit<sp/>terminal...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" kindref="member">_amend_commit</ref>()</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" kindref="member">process_jira_integration</ref>(self,<sp/>title:<sp/>str,<sp/>description:<sp/>str,<sp/>msg:<sp/>str)<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Look<sp/>for<sp/>JIRA<sp/>issue<sp/>keys<sp/>in<sp/>commit<sp/>message,<sp/>title,<sp/>description<sp/>and<sp/>user<sp/>message</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Process<sp/>JIRA<sp/>integration<sp/>by<sp/>extracting<sp/>issue<sp/>keys<sp/>from<sp/>commit<sp/>message</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>components<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>branch<sp/>name.</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>looks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>issue<sp/>keys<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>provided<sp/>commit<sp/>title,</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description,<sp/>original<sp/>user<sp/>message,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>active<sp/>branch<sp/>name.<sp/>It<sp/>uses<sp/>these</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>keys<sp/>to<sp/>update<sp/>the<sp/>commit<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA<sp/>information<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>adds<sp/>comments<sp/>to</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>corresponding<sp/>JIRA<sp/>issues.<sp/>If<sp/>no<sp/>keys<sp/>are<sp/>found,<sp/>it<sp/>logs<sp/>a<sp/>warning.</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>(str):<sp/>The<sp/>generated<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>(str):<sp/>The<sp/>generated<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>msg<sp/>(str):<sp/>The<sp/>original<sp/>user<sp/>message<sp/>that<sp/>might<sp/>contain<sp/>JIRA<sp/>references.</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>updated<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>included<sp/>JIRA</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>information.</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="122"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="123"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.jira_client:</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>from<sp/>message<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys(f</highlight><highlight class="stringliteral">&quot;{title}<sp/>{description}<sp/>{msg}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Also<sp/>check<sp/>the<sp/>branch<sp/>name<sp/>(which<sp/>often<sp/>follows<sp/>JIRA<sp/>naming<sp/>conventions)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_branch<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.active_branch.name</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>branch_issue_keys<sp/>=<sp/>self.jira_client.extract_issue_keys_from_branch(current_branch)</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>any<sp/>new<sp/>keys<sp/>found<sp/>in<sp/>branch<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>branch_issue_keys:</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys.append(key)</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Added<sp/>JIRA<sp/>issue<sp/>{key}<sp/>from<sp/>branch<sp/>name:<sp/>{current_branch}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>extract<sp/>JIRA<sp/>issues<sp/>from<sp/>branch<sp/>name:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Found<sp/>JIRA<sp/>issues:<sp/>{&apos;,<sp/>&apos;.join(issue_keys)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Format<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>info</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>comments<sp/>to<sp/>JIRA<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue_key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comment<sp/>=<sp/>(</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;Commit<sp/>related<sp/>to<sp/>this<sp/>issue:\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;**{title}**\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;{description}\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.jira_client.add_comment(issue_key,<sp/>comment)</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(</highlight><highlight class="stringliteral">&quot;No<sp/>JIRA<sp/>issues<sp/>found<sp/>in<sp/>commit<sp/>message<sp/>or<sp/>branch<sp/>name&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>title,<sp/>description</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"></highlight></codeline>
+<codeline lineno="158" refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" kindref="member">_amend_commit</ref>(self):</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Amends<sp/>the<sp/>last<sp/>commit<sp/>message<sp/>in<sp/>the<sp/>repository.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Change<sp/>to<sp/>the<sp/>repository<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.chdir(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>)</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Run<sp/>git<sp/>commit<sp/>--amend</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subprocess.run([</highlight><highlight class="stringliteral">&apos;git&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;commit&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;--amend&apos;</highlight><highlight class="normal">],<sp/>check=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Commit<sp/>message<sp/>amended<sp/>successfully.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>subprocess.CalledProcessError<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>amending<sp/>commit<sp/>message:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">finally</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Change<sp/>back<sp/>to<sp/>the<sp/>original<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.chdir(os.path.dirname(os.path.abspath(__file__)))</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/commit__commands_8py.xml b/docs/xml/commit__commands_8py.xml
new file mode 100644
index 0000000..217bf43
--- /dev/null
+++ b/docs/xml/commit__commands_8py.xml
@@ -0,0 +1,162 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="commit__commands_8py" kind="file" language="Python">
+    <compoundname>commit_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1commit__commands">penify_hook::commands::commit_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1commit__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_warning</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(api_url,<sp/>token,<sp/>message,<sp/>open_terminal,<sp/>generate_description,</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=None,<sp/>llm_api_base=None,<sp/>llm_api_key=None,</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=None,<sp/>jira_user=None,<sp/>jira_api_token=None):</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Enhance<sp/>Git<sp/>commits<sp/>with<sp/>AI-powered<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="13"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>allows<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>generation<sp/>of<sp/>enhanced<sp/>commit<sp/>messages<sp/>using</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>natural<sp/>language<sp/>processing<sp/>models<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>optionally<sp/>integrates<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/>additional<sp/>context.<sp/>It<sp/>processes<sp/>the<sp/>current<sp/>Git<sp/>folder<sp/>to<sp/>find<sp/>relevant<sp/>files</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>based<sp/>on<sp/>the<sp/>provided<sp/>parameters.</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>endpoint.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>Authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>Initial<sp/>commit<sp/>message<sp/>provided<sp/>by<sp/>the<sp/>user.</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal<sp/>(bool):<sp/>Whether<sp/>to<sp/>open<sp/>the<sp/>terminal<sp/>after<sp/>committing.</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Whether<sp/>to<sp/>generate<sp/>a<sp/>detailed<sp/>description<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model<sp/>(str?):<sp/>The<sp/>language<sp/>model<sp/>to<sp/>use<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>the<sp/>commit<sp/>message.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base<sp/>(str?):<sp/>Base<sp/>URL<sp/>of<sp/>the<sp/>LLM<sp/>API.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key<sp/>(str?):<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>LLM<sp/>service.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url<sp/>(str?):<sp/>URL<sp/>of<sp/>the<sp/>JIRA<sp/>instance.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user<sp/>(str?):<sp/>Username<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>authenticating<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token<sp/>(str?):<sp/>API<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>JIRA.<sp/>Defaults<sp/>to<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_error</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..commit_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>CommitDocGenHook</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>importing<sp/>optional<sp/>dependencies</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..llm_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>LLMClient</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..jira_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JiraClient<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>API<sp/>client</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/>api_client<sp/>=<sp/>APIClient(api_url,<sp/>token)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Initialize<sp/>LLM<sp/>client<sp/>if<sp/>LLM<sp/>parameters<sp/>are<sp/>provided<sp/>and<sp/>LLMClient<sp/>is<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>LLMClient<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>llm_model:</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_client<sp/>=<sp/>LLMClient(</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=llm_model,</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base=llm_api_base,</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key=llm_api_key</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Using<sp/>LLM<sp/>model:<sp/>{llm_model}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(f</highlight><highlight class="stringliteral">&quot;Error<sp/>initializing<sp/>LLM<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(</highlight><highlight class="stringliteral">&quot;Falling<sp/>back<sp/>to<sp/>API<sp/>for<sp/>commit<sp/>summary<sp/>generation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(</highlight><highlight class="stringliteral">&quot;No<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token<sp/>provided.<sp/>Please<sp/>provide<sp/>an<sp/>LLM<sp/>model<sp/>or<sp/>API<sp/>token.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Initialize<sp/>JIRA<sp/>client<sp/>if<sp/>parameters<sp/>are<sp/>provided<sp/>and<sp/>JiraClient<sp/>is<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>JiraClient<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_url<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_user<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_api_token:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/>JiraClient(</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=jira_url,</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=jira_user,</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=jira_api_token</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_client.is_connected():</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Connected<sp/>to<sp/>JIRA:<sp/>{jira_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA:<sp/>{jira_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;Error<sp/>initializing<sp/>JIRA<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Pass<sp/>the<sp/>LLM<sp/>client<sp/>and<sp/>JIRA<sp/>client<sp/>to<sp/>CommitDocGenHook</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>gf_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(os.getcwd())</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>CommitDocGenHook(gf_path,<sp/>api_client,<sp/>llm_client,<sp/>jira_client)</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run(message,<sp/>open_terminal,<sp/>generate_description)</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"></highlight></codeline>
+<codeline lineno="98" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Sets<sp/>up<sp/>an<sp/>argument<sp/>parser<sp/>for<sp/>generating<sp/>smart<sp/>commit<sp/>messages.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/>commit_parser_description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="102"><highlight class="stringliteral">It<sp/>generates<sp/>smart<sp/>commit<sp/>messages.<sp/>By<sp/>default,<sp/>it<sp/>will<sp/>just<sp/>generate<sp/>just<sp/>the<sp/>Title<sp/>of<sp/>the<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral">1.<sp/>If<sp/>you<sp/>have<sp/>not<sp/>configured<sp/>LLM,<sp/>it<sp/>will<sp/>give<sp/>an<sp/>error.<sp/>You<sp/>either<sp/>need<sp/>to<sp/>configure<sp/>LLM<sp/>or<sp/>use<sp/>the<sp/>API<sp/>key.</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral">2.<sp/>If<sp/>you<sp/>have<sp/>not<sp/>configured<sp/>JIRA.<sp/>It<sp/>will<sp/>not<sp/>enhance<sp/>the<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>issue<sp/>details.</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral">3.<sp/>For<sp/>more<sp/>information,<sp/>visit<sp/>https://penify.wiki/dcsgc1</highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.help<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM(no<sp/>login<sp/>required).&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.description<sp/>=<sp/>commit_parser_description</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.formatter_class<sp/>=<sp/>argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>the<sp/>message<sp/>argument<sp/>with<sp/>better<sp/>help</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-m&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--message&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Commit<sp/>with<sp/>contextual<sp/>commit<sp/>message.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-e&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--terminal&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Open<sp/>edit<sp/>terminal<sp/>before<sp/>committing.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-d&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--description&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_false&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;It<sp/>will<sp/>generate<sp/>commit<sp/>message<sp/>with<sp/>title<sp/>and<sp/>description.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="116" refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args):</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>commit<sp/>functionality<sp/>by<sp/>processing<sp/>arguments<sp/>and<sp/>invoking<sp/>the</highlight></codeline>
+<codeline lineno="119"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>appropriate<sp/>commands.&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="120"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands" kindref="compound">penify_hook.commands.commit_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>commit_code</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_jira_config,<sp/>get_llm_config,<sp/>get_token</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>commit<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>open_terminal<sp/>=<sp/>args.terminal</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>generate_description<sp/>=<sp/>args.description</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Generate<sp/>Commit<sp/>Description:<sp/>{generate_description}&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>get<sp/>from<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_model<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_api_base<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">)<sp/></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_api_key<sp/>=<sp/>llm_config.get(</highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/>token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>get<sp/>from<sp/>config</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_url<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_user<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_api_token<sp/>=<sp/>jira_config.get(</highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"></highlight></codeline>
+<codeline lineno="143"><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(API_URL,<sp/>token,<sp/>args.message,<sp/>open_terminal,<sp/>generate_description,</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model,<sp/>llm_api_base,<sp/>llm_api_key,</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url,<sp/>jira_user,<sp/>jira_api_token)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/compound.xsd b/docs/xml/compound.xsd
new file mode 100644
index 0000000..e0ffe43
--- /dev/null
+++ b/docs/xml/compound.xsd
@@ -0,0 +1,1290 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxygen" type="DoxygenType"/>
+
+  <!-- Complex types -->
+
+  <xsd:complexType name="DoxygenType">
+    <xsd:sequence maxOccurs="unbounded">
+      <xsd:element name="compounddef" type="compounddefType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="version" type="DoxVersionNumber" use="required" />
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="compounddefType">
+    <xsd:sequence>
+      <xsd:element name="compoundname" type="xsd:string"/>
+      <xsd:element name="title" type="xsd:string" minOccurs="0" />
+      <xsd:element name="basecompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="derivedcompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="includes" type="incType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="includedby" type="incType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="incdepgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="invincdepgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="innerdir" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerfile" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerclass" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innernamespace" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innerpage" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="innergroup" type="refType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
+      <xsd:element name="sectiondef" type="sectiondefType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="1" />
+      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="inheritancegraph" type="graphType" minOccurs="0" />
+      <xsd:element name="collaborationgraph" type="graphType" minOccurs="0" />
+      <xsd:element name="programlisting" type="listingType" minOccurs="0" />
+      <xsd:element name="location" type="locationType" minOccurs="0" />
+      <xsd:element name="listofallmembers" type="listofallmembersType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="kind" type="DoxCompoundKind" />
+    <xsd:attribute name="language" type="DoxLanguage" use="optional"/>
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="final" type="DoxBool" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
+    <xsd:attribute name="abstract" type="DoxBool" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="listofallmembersType">
+    <xsd:sequence>
+      <xsd:element name="member" type="memberRefType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="memberRefType">
+    <xsd:sequence>
+      <xsd:element name="scope" />
+      <xsd:element name="name" />
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="virt" type="DoxVirtualKind" />
+    <xsd:attribute name="ambiguityscope" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docHtmlOnlyType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="block" type="xsd:string" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="compoundRefType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" use="optional" />
+        <xsd:attribute name="prot" type="DoxProtectionKind" />
+        <xsd:attribute name="virt" type="DoxVirtualKind" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="reimplementType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="incType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+        <xsd:attribute name="local" type="DoxBool" />
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="refType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+        <xsd:attribute name="refid" type="xsd:string" />
+        <xsd:attribute name="prot" type="DoxProtectionKind" use="optional"/>
+        <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="refTextType">
+    <xsd:simpleContent>
+      <xsd:extension base="xsd:string">
+       <xsd:attribute name="refid" type="xsd:string" />
+       <xsd:attribute name="kindref" type="DoxRefKind" />
+       <xsd:attribute name="external" type="xsd:string" use="optional"/>
+       <xsd:attribute name="tooltip" type="xsd:string" use="optional"/>
+      </xsd:extension>
+    </xsd:simpleContent>
+  </xsd:complexType>
+
+  <xsd:complexType name="sectiondefType">
+    <xsd:sequence>
+      <xsd:element name="header" type="xsd:string" minOccurs="0" />
+      <xsd:element name="description" type="descriptionType" minOccurs="0" />
+      <xsd:element name="memberdef" type="memberdefType" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxSectionKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="memberdefType">
+    <xsd:sequence>
+      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
+      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="definition" minOccurs="0" />
+      <xsd:element name="argsstring" minOccurs="0" />
+      <xsd:element name="name" />
+      <xsd:element name="qualifiedname" minOccurs="0"/>
+      <xsd:element name="read" minOccurs="0" />
+      <xsd:element name="write" minOccurs="0" />
+      <xsd:element name="bitfield" minOccurs="0" />
+      <xsd:element name="reimplements" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="reimplementedby" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="enumvalue" type="enumvalueType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="exceptions" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="inbodydescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="location" type="locationType" />
+      <xsd:element name="references" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="referencedby" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxMemberKind" />
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+    <xsd:attribute name="static" type="DoxBool" />
+    <xsd:attribute name="strong" type="DoxBool" use="optional"/>
+    <xsd:attribute name="const" type="DoxBool" use="optional"/>
+    <xsd:attribute name="explicit" type="DoxBool" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="refqual" type="DoxRefQualifierKind" use="optional"/>
+    <xsd:attribute name="virt" type="DoxVirtualKind" use="optional"/>
+    <xsd:attribute name="volatile" type="DoxBool" use="optional"/>
+    <xsd:attribute name="mutable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="noexcept" type="DoxBool" use="optional"/>
+    <xsd:attribute name="constexpr" type="DoxBool" use="optional"/>
+    <!-- Qt property -->
+    <xsd:attribute name="readable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="writable" type="DoxBool" use="optional"/>
+    <!-- C++/CLI variable -->
+    <xsd:attribute name="initonly" type="DoxBool" use="optional"/>
+    <!-- C++/CLI and C# property -->
+    <xsd:attribute name="settable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="privatesettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="protectedsettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="gettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="privategettable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="protectedgettable" type="DoxBool" use="optional"/>
+    <!-- C++/CLI function -->
+    <xsd:attribute name="final" type="DoxBool" use="optional"/>
+    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
+    <xsd:attribute name="new" type="DoxBool" use="optional"/>
+    <!-- C++/CLI event -->
+    <xsd:attribute name="add" type="DoxBool" use="optional"/>
+    <xsd:attribute name="remove" type="DoxBool" use="optional"/>
+    <xsd:attribute name="raise" type="DoxBool" use="optional"/>
+    <!-- Objective-C 2.0 protocol method -->
+    <xsd:attribute name="optional" type="DoxBool" use="optional"/>
+    <xsd:attribute name="required" type="DoxBool" use="optional"/>
+    <!-- Objective-C 2.0 property accessor -->
+    <xsd:attribute name="accessor" type="DoxAccessor" use="optional"/>
+    <!-- UNO IDL -->
+    <xsd:attribute name="attribute" type="DoxBool" use="optional"/>
+    <xsd:attribute name="property" type="DoxBool" use="optional"/>
+    <xsd:attribute name="readonly" type="DoxBool" use="optional"/>
+    <xsd:attribute name="bound" type="DoxBool" use="optional"/>
+    <xsd:attribute name="removable" type="DoxBool" use="optional"/>
+    <xsd:attribute name="constrained" type="DoxBool" use="optional"/>
+    <xsd:attribute name="transient" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybevoid" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybedefault" type="DoxBool" use="optional"/>
+    <xsd:attribute name="maybeambiguous" type="DoxBool" use="optional"/>
+
+  </xsd:complexType>
+
+  <xsd:complexType name="descriptionType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" minOccurs="0"/>	    
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="internal" type="docInternalType" minOccurs="0" maxOccurs="unbounded"/>
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="enumvalueType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="name" />
+      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+    <xsd:attribute name="prot" type="DoxProtectionKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="templateparamlistType">
+    <xsd:sequence>
+      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="paramType">
+    <xsd:sequence>
+      <xsd:element name="attributes" minOccurs="0" />
+      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="declname" minOccurs="0" />
+      <xsd:element name="defname" minOccurs="0" />
+      <xsd:element name="array" minOccurs="0" />
+      <xsd:element name="defval" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="typeconstraint" type="linkedTextType" minOccurs="0" />
+      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="linkedTextType" mixed="true">
+    <xsd:sequence>
+    <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="graphType">
+    <xsd:sequence>
+      <xsd:element name="node" type="nodeType" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="nodeType">
+    <xsd:sequence>
+      <xsd:element name="label" />
+      <xsd:element name="link" type="linkType" minOccurs="0" />
+      <xsd:element name="childnode" type="childnodeType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="childnodeType">
+    <xsd:sequence>
+      <xsd:element name="edgelabel" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="relation" type="DoxGraphRelation" />
+  </xsd:complexType>
+
+  <xsd:complexType name="linkType">
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="external" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="listingType">
+    <xsd:sequence>
+      <xsd:element name="codeline" type="codelineType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="filename" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="codelineType">
+    <xsd:sequence>
+      <xsd:element name="highlight" type="highlightType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="lineno" type="xsd:integer" />
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="refkind" type="DoxRefKind" />
+    <xsd:attribute name="external" type="DoxBool" />
+  </xsd:complexType>
+
+  <xsd:complexType name="highlightType" mixed="true">
+    <xsd:choice minOccurs="0" maxOccurs="unbounded">
+      <xsd:element name="sp" type="spType" />
+      <xsd:element name="ref" type="refTextType" />
+    </xsd:choice>
+    <xsd:attribute name="class" type="DoxHighlightClass" />
+  </xsd:complexType>
+
+  <xsd:complexType name="spType" mixed="true">
+    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="referenceType" mixed="true">
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="compoundref" type="xsd:string" use="optional" />
+    <xsd:attribute name="startline" type="xsd:integer" />
+    <xsd:attribute name="endline" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="locationType">
+    <xsd:attribute name="file" type="xsd:string" />
+    <xsd:attribute name="line" type="xsd:integer" />
+    <xsd:attribute name="column" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="declfile" type="xsd:string" use="optional"/>
+    <xsd:attribute name="declline" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="declcolumn" type="xsd:integer" use="optional"/>
+    <xsd:attribute name="bodyfile" type="xsd:string" />
+    <xsd:attribute name="bodystart" type="xsd:integer" />
+    <xsd:attribute name="bodyend" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect1Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" minOccurs="0" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS1Type" minOccurs="0"  maxOccurs="unbounded" />
+        <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect2Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS2Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect3Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="sect4" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS3Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docSect4Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="title" type="xsd:string" />
+      <xsd:choice maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+        <xsd:element name="internal" type="docInternalS4Type" minOccurs="0" />
+      </xsd:choice>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS1Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS2Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS3Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect3" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docInternalS4Type" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+ 
+  <xsd:group name="docTitleCmdGroup">
+    <xsd:choice>
+      <xsd:element name="ulink" type="docURLLink" />
+      <xsd:element name="bold" type="docMarkupType" />
+      <xsd:element name="s" type="docMarkupType" />
+      <xsd:element name="strike" type="docMarkupType" />
+      <xsd:element name="underline" type="docMarkupType" />
+      <xsd:element name="emphasis" type="docMarkupType" />
+      <xsd:element name="computeroutput" type="docMarkupType" />
+      <xsd:element name="subscript" type="docMarkupType" />
+      <xsd:element name="superscript" type="docMarkupType" />
+      <xsd:element name="center" type="docMarkupType" />
+      <xsd:element name="small" type="docMarkupType" />
+      <xsd:element name="cite" type="docMarkupType" />
+      <xsd:element name="del" type="docMarkupType" />
+      <xsd:element name="ins" type="docMarkupType" />
+      <xsd:element name="details" type="docMarkupType" />
+      <xsd:element name="summary" type="docMarkupType" />
+      <xsd:element name="htmlonly" type="docHtmlOnlyType" />
+      <xsd:element name="manonly" type="xsd:string" />
+      <xsd:element name="xmlonly" type="xsd:string" />
+      <xsd:element name="rtfonly" type="xsd:string" />
+      <xsd:element name="latexonly" type="xsd:string" />
+      <xsd:element name="docbookonly" type="xsd:string" />
+      <xsd:element name="image" type="docImageType" />
+      <xsd:element name="dot" type="docDotMscType" />
+      <xsd:element name="msc" type="docDotMscType" />
+      <xsd:element name="plantuml" type="docPlantumlType" />
+      <xsd:element name="anchor" type="docAnchorType" />
+      <xsd:element name="formula" type="docFormulaType" />
+      <xsd:element name="ref" type="docRefTextType" />
+      <xsd:element name="emoji" type="docEmojiType" />
+      <xsd:element name="linebreak" type="docEmptyType" />
+      <xsd:element name="nonbreakablespace" type="docEmptyType" />
+      <xsd:element name="iexcl" type="docEmptyType" />
+      <xsd:element name="cent" type="docEmptyType" />
+      <xsd:element name="pound" type="docEmptyType" />
+      <xsd:element name="curren" type="docEmptyType" />
+      <xsd:element name="yen" type="docEmptyType" />
+      <xsd:element name="brvbar" type="docEmptyType" />
+      <xsd:element name="sect" type="docEmptyType" />
+      <xsd:element name="umlaut" type="docEmptyType" />
+      <xsd:element name="copy" type="docEmptyType" />
+      <xsd:element name="ordf" type="docEmptyType" />
+      <xsd:element name="laquo" type="docEmptyType" />
+      <xsd:element name="not" type="docEmptyType" />
+      <xsd:element name="shy" type="docEmptyType" />
+      <xsd:element name="registered" type="docEmptyType" />
+      <xsd:element name="macr" type="docEmptyType" />
+      <xsd:element name="deg" type="docEmptyType" />
+      <xsd:element name="plusmn" type="docEmptyType" />
+      <xsd:element name="sup2" type="docEmptyType" />
+      <xsd:element name="sup3" type="docEmptyType" />
+      <xsd:element name="acute" type="docEmptyType" />
+      <xsd:element name="micro" type="docEmptyType" />
+      <xsd:element name="para" type="docEmptyType" />
+      <xsd:element name="middot" type="docEmptyType" />
+      <xsd:element name="cedil" type="docEmptyType" />
+      <xsd:element name="sup1" type="docEmptyType" />
+      <xsd:element name="ordm" type="docEmptyType" />
+      <xsd:element name="raquo" type="docEmptyType" />
+      <xsd:element name="frac14" type="docEmptyType" />
+      <xsd:element name="frac12" type="docEmptyType" />
+      <xsd:element name="frac34" type="docEmptyType" />
+      <xsd:element name="iquest" type="docEmptyType" />
+      <xsd:element name="Agrave" type="docEmptyType" />
+      <xsd:element name="Aacute" type="docEmptyType" />
+      <xsd:element name="Acirc" type="docEmptyType" />
+      <xsd:element name="Atilde" type="docEmptyType" />
+      <xsd:element name="Aumlaut" type="docEmptyType" />
+      <xsd:element name="Aring" type="docEmptyType" />
+      <xsd:element name="AElig" type="docEmptyType" />
+      <xsd:element name="Ccedil" type="docEmptyType" />
+      <xsd:element name="Egrave" type="docEmptyType" />
+      <xsd:element name="Eacute" type="docEmptyType" />
+      <xsd:element name="Ecirc" type="docEmptyType" />
+      <xsd:element name="Eumlaut" type="docEmptyType" />
+      <xsd:element name="Igrave" type="docEmptyType" />
+      <xsd:element name="Iacute" type="docEmptyType" />
+      <xsd:element name="Icirc" type="docEmptyType" />
+      <xsd:element name="Iumlaut" type="docEmptyType" />
+      <xsd:element name="ETH" type="docEmptyType" />
+      <xsd:element name="Ntilde" type="docEmptyType" />
+      <xsd:element name="Ograve" type="docEmptyType" />
+      <xsd:element name="Oacute" type="docEmptyType" />
+      <xsd:element name="Ocirc" type="docEmptyType" />
+      <xsd:element name="Otilde" type="docEmptyType" />
+      <xsd:element name="Oumlaut" type="docEmptyType" />
+      <xsd:element name="times" type="docEmptyType" />
+      <xsd:element name="Oslash" type="docEmptyType" />
+      <xsd:element name="Ugrave" type="docEmptyType" />
+      <xsd:element name="Uacute" type="docEmptyType" />
+      <xsd:element name="Ucirc" type="docEmptyType" />
+      <xsd:element name="Uumlaut" type="docEmptyType" />
+      <xsd:element name="Yacute" type="docEmptyType" />
+      <xsd:element name="THORN" type="docEmptyType" />
+      <xsd:element name="szlig" type="docEmptyType" />
+      <xsd:element name="agrave" type="docEmptyType" />
+      <xsd:element name="aacute" type="docEmptyType" />
+      <xsd:element name="acirc" type="docEmptyType" />
+      <xsd:element name="atilde" type="docEmptyType" />
+      <xsd:element name="aumlaut" type="docEmptyType" />
+      <xsd:element name="aring" type="docEmptyType" />
+      <xsd:element name="aelig" type="docEmptyType" />
+      <xsd:element name="ccedil" type="docEmptyType" />
+      <xsd:element name="egrave" type="docEmptyType" />
+      <xsd:element name="eacute" type="docEmptyType" />
+      <xsd:element name="ecirc" type="docEmptyType" />
+      <xsd:element name="eumlaut" type="docEmptyType" />
+      <xsd:element name="igrave" type="docEmptyType" />
+      <xsd:element name="iacute" type="docEmptyType" />
+      <xsd:element name="icirc" type="docEmptyType" />
+      <xsd:element name="iumlaut" type="docEmptyType" />
+      <xsd:element name="eth" type="docEmptyType" />
+      <xsd:element name="ntilde" type="docEmptyType" />
+      <xsd:element name="ograve" type="docEmptyType" />
+      <xsd:element name="oacute" type="docEmptyType" />
+      <xsd:element name="ocirc" type="docEmptyType" />
+      <xsd:element name="otilde" type="docEmptyType" />
+      <xsd:element name="oumlaut" type="docEmptyType" />
+      <xsd:element name="divide" type="docEmptyType" />
+      <xsd:element name="oslash" type="docEmptyType" />
+      <xsd:element name="ugrave" type="docEmptyType" />
+      <xsd:element name="uacute" type="docEmptyType" />
+      <xsd:element name="ucirc" type="docEmptyType" />
+      <xsd:element name="uumlaut" type="docEmptyType" />
+      <xsd:element name="yacute" type="docEmptyType" />
+      <xsd:element name="thorn" type="docEmptyType" />
+      <xsd:element name="yumlaut" type="docEmptyType" />
+      <xsd:element name="fnof" type="docEmptyType" />
+      <xsd:element name="Alpha" type="docEmptyType" />
+      <xsd:element name="Beta" type="docEmptyType" />
+      <xsd:element name="Gamma" type="docEmptyType" />
+      <xsd:element name="Delta" type="docEmptyType" />
+      <xsd:element name="Epsilon" type="docEmptyType" />
+      <xsd:element name="Zeta" type="docEmptyType" />
+      <xsd:element name="Eta" type="docEmptyType" />
+      <xsd:element name="Theta" type="docEmptyType" />
+      <xsd:element name="Iota" type="docEmptyType" />
+      <xsd:element name="Kappa" type="docEmptyType" />
+      <xsd:element name="Lambda" type="docEmptyType" />
+      <xsd:element name="Mu" type="docEmptyType" />
+      <xsd:element name="Nu" type="docEmptyType" />
+      <xsd:element name="Xi" type="docEmptyType" />
+      <xsd:element name="Omicron" type="docEmptyType" />
+      <xsd:element name="Pi" type="docEmptyType" />
+      <xsd:element name="Rho" type="docEmptyType" />
+      <xsd:element name="Sigma" type="docEmptyType" />
+      <xsd:element name="Tau" type="docEmptyType" />
+      <xsd:element name="Upsilon" type="docEmptyType" />
+      <xsd:element name="Phi" type="docEmptyType" />
+      <xsd:element name="Chi" type="docEmptyType" />
+      <xsd:element name="Psi" type="docEmptyType" />
+      <xsd:element name="Omega" type="docEmptyType" />
+      <xsd:element name="alpha" type="docEmptyType" />
+      <xsd:element name="beta" type="docEmptyType" />
+      <xsd:element name="gamma" type="docEmptyType" />
+      <xsd:element name="delta" type="docEmptyType" />
+      <xsd:element name="epsilon" type="docEmptyType" />
+      <xsd:element name="zeta" type="docEmptyType" />
+      <xsd:element name="eta" type="docEmptyType" />
+      <xsd:element name="theta" type="docEmptyType" />
+      <xsd:element name="iota" type="docEmptyType" />
+      <xsd:element name="kappa" type="docEmptyType" />
+      <xsd:element name="lambda" type="docEmptyType" />
+      <xsd:element name="mu" type="docEmptyType" />
+      <xsd:element name="nu" type="docEmptyType" />
+      <xsd:element name="xi" type="docEmptyType" />
+      <xsd:element name="omicron" type="docEmptyType" />
+      <xsd:element name="pi" type="docEmptyType" />
+      <xsd:element name="rho" type="docEmptyType" />
+      <xsd:element name="sigmaf" type="docEmptyType" />
+      <xsd:element name="sigma" type="docEmptyType" />
+      <xsd:element name="tau" type="docEmptyType" />
+      <xsd:element name="upsilon" type="docEmptyType" />
+      <xsd:element name="phi" type="docEmptyType" />
+      <xsd:element name="chi" type="docEmptyType" />
+      <xsd:element name="psi" type="docEmptyType" />
+      <xsd:element name="omega" type="docEmptyType" />
+      <xsd:element name="thetasym" type="docEmptyType" />
+      <xsd:element name="upsih" type="docEmptyType" />
+      <xsd:element name="piv" type="docEmptyType" />
+      <xsd:element name="bull" type="docEmptyType" />
+      <xsd:element name="hellip" type="docEmptyType" />
+      <xsd:element name="prime" type="docEmptyType" />
+      <xsd:element name="Prime" type="docEmptyType" />
+      <xsd:element name="oline" type="docEmptyType" />
+      <xsd:element name="frasl" type="docEmptyType" />
+      <xsd:element name="weierp" type="docEmptyType" />
+      <xsd:element name="imaginary" type="docEmptyType" />
+      <xsd:element name="real" type="docEmptyType" />
+      <xsd:element name="trademark" type="docEmptyType" />
+      <xsd:element name="alefsym" type="docEmptyType" />
+      <xsd:element name="larr" type="docEmptyType" />
+      <xsd:element name="uarr" type="docEmptyType" />
+      <xsd:element name="rarr" type="docEmptyType" />
+      <xsd:element name="darr" type="docEmptyType" />
+      <xsd:element name="harr" type="docEmptyType" />
+      <xsd:element name="crarr" type="docEmptyType" />
+      <xsd:element name="lArr" type="docEmptyType" />
+      <xsd:element name="uArr" type="docEmptyType" />
+      <xsd:element name="rArr" type="docEmptyType" />
+      <xsd:element name="dArr" type="docEmptyType" />
+      <xsd:element name="hArr" type="docEmptyType" />
+      <xsd:element name="forall" type="docEmptyType" />
+      <xsd:element name="part" type="docEmptyType" />
+      <xsd:element name="exist" type="docEmptyType" />
+      <xsd:element name="empty" type="docEmptyType" />
+      <xsd:element name="nabla" type="docEmptyType" />
+      <xsd:element name="isin" type="docEmptyType" />
+      <xsd:element name="notin" type="docEmptyType" />
+      <xsd:element name="ni" type="docEmptyType" />
+      <xsd:element name="prod" type="docEmptyType" />
+      <xsd:element name="sum" type="docEmptyType" />
+      <xsd:element name="minus" type="docEmptyType" />
+      <xsd:element name="lowast" type="docEmptyType" />
+      <xsd:element name="radic" type="docEmptyType" />
+      <xsd:element name="prop" type="docEmptyType" />
+      <xsd:element name="infin" type="docEmptyType" />
+      <xsd:element name="ang" type="docEmptyType" />
+      <xsd:element name="and" type="docEmptyType" />
+      <xsd:element name="or" type="docEmptyType" />
+      <xsd:element name="cap" type="docEmptyType" />
+      <xsd:element name="cup" type="docEmptyType" />
+      <xsd:element name="int" type="docEmptyType" />
+      <xsd:element name="there4" type="docEmptyType" />
+      <xsd:element name="sim" type="docEmptyType" />
+      <xsd:element name="cong" type="docEmptyType" />
+      <xsd:element name="asymp" type="docEmptyType" />
+      <xsd:element name="ne" type="docEmptyType" />
+      <xsd:element name="equiv" type="docEmptyType" />
+      <xsd:element name="le" type="docEmptyType" />
+      <xsd:element name="ge" type="docEmptyType" />
+      <xsd:element name="sub" type="docEmptyType" />
+      <xsd:element name="sup" type="docEmptyType" />
+      <xsd:element name="nsub" type="docEmptyType" />
+      <xsd:element name="sube" type="docEmptyType" />
+      <xsd:element name="supe" type="docEmptyType" />
+      <xsd:element name="oplus" type="docEmptyType" />
+      <xsd:element name="otimes" type="docEmptyType" />
+      <xsd:element name="perp" type="docEmptyType" />
+      <xsd:element name="sdot" type="docEmptyType" />
+      <xsd:element name="lceil" type="docEmptyType" />
+      <xsd:element name="rceil" type="docEmptyType" />
+      <xsd:element name="lfloor" type="docEmptyType" />
+      <xsd:element name="rfloor" type="docEmptyType" />
+      <xsd:element name="lang" type="docEmptyType" />
+      <xsd:element name="rang" type="docEmptyType" />
+      <xsd:element name="loz" type="docEmptyType" />
+      <xsd:element name="spades" type="docEmptyType" />
+      <xsd:element name="clubs" type="docEmptyType" />
+      <xsd:element name="hearts" type="docEmptyType" />
+      <xsd:element name="diams" type="docEmptyType" />
+      <xsd:element name="OElig" type="docEmptyType" />
+      <xsd:element name="oelig" type="docEmptyType" />
+      <xsd:element name="Scaron" type="docEmptyType" />
+      <xsd:element name="scaron" type="docEmptyType" />
+      <xsd:element name="Yumlaut" type="docEmptyType" />
+      <xsd:element name="circ" type="docEmptyType" />
+      <xsd:element name="tilde" type="docEmptyType" />
+      <xsd:element name="ensp" type="docEmptyType" />
+      <xsd:element name="emsp" type="docEmptyType" />
+      <xsd:element name="thinsp" type="docEmptyType" />
+      <xsd:element name="zwnj" type="docEmptyType" />
+      <xsd:element name="zwj" type="docEmptyType" />
+      <xsd:element name="lrm" type="docEmptyType" />
+      <xsd:element name="rlm" type="docEmptyType" />
+      <xsd:element name="ndash" type="docEmptyType" />
+      <xsd:element name="mdash" type="docEmptyType" />
+      <xsd:element name="lsquo" type="docEmptyType" />
+      <xsd:element name="rsquo" type="docEmptyType" />
+      <xsd:element name="sbquo" type="docEmptyType" />
+      <xsd:element name="ldquo" type="docEmptyType" />
+      <xsd:element name="rdquo" type="docEmptyType" />
+      <xsd:element name="bdquo" type="docEmptyType" />
+      <xsd:element name="dagger" type="docEmptyType" />
+      <xsd:element name="Dagger" type="docEmptyType" />
+      <xsd:element name="permil" type="docEmptyType" />
+      <xsd:element name="lsaquo" type="docEmptyType" />
+      <xsd:element name="rsaquo" type="docEmptyType" />
+      <xsd:element name="euro" type="docEmptyType" />
+      <xsd:element name="tm" type="docEmptyType" />
+    </xsd:choice>
+  </xsd:group>
+
+  <xsd:complexType name="docTitleType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:group name="docCmdGroup">
+    <xsd:choice>
+      <xsd:group ref="docTitleCmdGroup"/>
+      <xsd:element name="hruler" type="docEmptyType" />
+      <xsd:element name="preformatted" type="docMarkupType" />
+      <xsd:element name="programlisting" type="listingType" />
+      <xsd:element name="verbatim" type="xsd:string" />
+      <xsd:element name="javadocliteral" type="xsd:string" />
+      <xsd:element name="javadoccode" type="xsd:string" />
+      <xsd:element name="indexentry" type="docIndexEntryType" />
+      <xsd:element name="orderedlist" type="docListType" />
+      <xsd:element name="itemizedlist" type="docListType" />
+      <xsd:element name="simplesect" type="docSimpleSectType" />
+      <xsd:element name="title" type="docTitleType" />
+      <xsd:element name="variablelist" type="docVariableListType" />
+      <xsd:element name="table" type="docTableType" />
+      <xsd:element name="heading" type="docHeadingType" />
+      <xsd:element name="dotfile" type="docImageFileType" />
+      <xsd:element name="mscfile" type="docImageFileType" />
+      <xsd:element name="diafile" type="docImageFileType" />
+      <xsd:element name="toclist" type="docTocListType" />
+      <xsd:element name="language" type="docLanguageType" />
+      <xsd:element name="parameterlist" type="docParamListType" />
+      <xsd:element name="xrefsect" type="docXRefSectType" />
+      <xsd:element name="copydoc" type="docCopyType" />
+      <xsd:element name="blockquote" type="docBlockQuoteType" />
+      <xsd:element name="parblock" type="docParBlockType" />
+    </xsd:choice>
+  </xsd:group>
+
+  <xsd:complexType name="docParaType" mixed="true">
+    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docMarkupType" mixed="true">
+    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docURLLink" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="url" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docAnchorType" mixed="true">
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docFormulaType" mixed="true">
+    <xsd:attribute name="id" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docIndexEntryType">
+    <xsd:sequence>
+      <xsd:element name="primaryie" type="xsd:string" />
+      <xsd:element name="secondaryie" type="xsd:string" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docListType">
+    <xsd:sequence>
+      <xsd:element name="listitem" type="docListItemType" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="type" type="DoxOlType" />
+    <xsd:attribute name="start" type="xsd:integer" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docListItemType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docSimpleSectType">
+    <xsd:sequence>
+      <xsd:element name="title" type="docTitleType" minOccurs="0" />
+      <xsd:sequence minOccurs="0" maxOccurs="unbounded">
+        <xsd:element name="para" type="docParaType" minOccurs="1" maxOccurs="unbounded" />
+      </xsd:sequence>
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxSimpleSectKind" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docVarListEntryType">
+    <xsd:sequence>
+      <xsd:element name="term" type="docTitleType" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:group name="docVariableListGroup">
+    <xsd:sequence>
+      <xsd:element name="varlistentry" type="docVarListEntryType" />
+      <xsd:element name="listitem" type="docListItemType" />
+    </xsd:sequence>
+  </xsd:group>
+
+  <xsd:complexType name="docVariableListType">
+    <xsd:sequence>
+      <xsd:group ref="docVariableListGroup" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docRefTextType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="refid" type="xsd:string" />
+    <xsd:attribute name="kindref" type="DoxRefKind" />
+    <xsd:attribute name="external" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docTableType">
+    <xsd:sequence>
+      <xsd:element name="caption" type="docCaptionType" minOccurs="0" maxOccurs="1" />
+      <xsd:element name="row" type="docRowType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="rows" type="xsd:integer" />
+    <xsd:attribute name="cols" type="xsd:integer" />
+    <xsd:attribute name="width" type="xsd:string" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docRowType">
+    <xsd:sequence>
+      <xsd:element name="entry" type="docEntryType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEntryType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="thead" type="DoxBool" />
+    <xsd:attribute name="colspan" type="xsd:integer" />
+    <xsd:attribute name="rowspan" type="xsd:integer" />
+    <xsd:attribute name="align" type="DoxAlign" />
+    <xsd:attribute name="valign" type="DoxVerticalAlign" />
+    <xsd:attribute name="width" type="xsd:string" />
+    <xsd:attribute name="class" type="xsd:string" />
+    <xsd:anyAttribute processContents="skip"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docCaptionType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docHeadingType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="level" type="xsd:integer" /> <!-- todo: range 1-6 -->
+  </xsd:complexType>
+
+  <xsd:complexType name="docImageType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="type" type="DoxImageKind" use="optional"/>
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="alt" type="xsd:string" use="optional"/>
+    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docDotMscType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docImageFileType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional">
+      <xsd:annotation>
+        <xsd:documentation>The mentioned file will be located in the directory as specified by XML_OUTPUT</xsd:documentation>
+      </xsd:annotation>
+    </xsd:attribute>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docPlantumlType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="name" type="xsd:string" use="optional"/>
+    <xsd:attribute name="width" type="xsd:string" use="optional"/>
+    <xsd:attribute name="height" type="xsd:string" use="optional"/>
+    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
+    <xsd:attribute name="engine" type="DoxPlantumlEngine" use="optional"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="docTocItemType" mixed="true">
+    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docTocListType">
+    <xsd:sequence>
+      <xsd:element name="tocitem" type="docTocItemType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docLanguageType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="langid" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamListType">
+    <xsd:sequence>
+      <xsd:element name="parameteritem" type="docParamListItem" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+    <xsd:attribute name="kind" type="DoxParamListKind" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamListItem">
+    <xsd:sequence>
+      <xsd:element name="parameternamelist" type="docParamNameList" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="parameterdescription" type="descriptionType" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamNameList">
+    <xsd:sequence>
+      <xsd:element name="parametertype" type="docParamType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="parametername" type="docParamName" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamType" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParamName" mixed="true">
+    <xsd:sequence>
+      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
+    </xsd:sequence>
+    <xsd:attribute name="direction" type="DoxParamDir" use="optional" />
+  </xsd:complexType>
+
+  <xsd:complexType name="docXRefSectType">
+    <xsd:sequence>
+      <xsd:element name="xreftitle" type="xsd:string" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="xrefdescription" type="descriptionType" />
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docCopyType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
+      <xsd:element name="internal" type="docInternalType" minOccurs="0" />
+    </xsd:sequence>
+    <xsd:attribute name="link" type="xsd:string" /> 
+  </xsd:complexType>
+
+  <xsd:complexType name="docBlockQuoteType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docParBlockType">
+    <xsd:sequence>
+      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEmptyType"/>
+
+  <xsd:complexType name="tableofcontentsType">
+    <xsd:sequence>
+      <xsd:element name="tocsect" type="tableofcontentsKindType" minOccurs="1" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="tableofcontentsKindType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string" minOccurs="1" maxOccurs="1"/>
+      <xsd:element name="reference" type="xsd:string" minOccurs="1" maxOccurs="1"/>
+      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="unbounded" />
+    </xsd:sequence>
+  </xsd:complexType>
+
+  <xsd:complexType name="docEmojiType">
+    <xsd:attribute name="name" type="xsd:string"/>
+    <xsd:attribute name="unicode" type="xsd:string"/>
+  </xsd:complexType>
+
+  <!-- Simple types -->
+
+  <xsd:simpleType name="DoxBool">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="yes" />
+      <xsd:enumeration value="no" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxGraphRelation">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="include" />
+      <xsd:enumeration value="usage" />
+      <xsd:enumeration value="template-instance" />
+      <xsd:enumeration value="public-inheritance" />
+      <xsd:enumeration value="protected-inheritance" />
+      <xsd:enumeration value="private-inheritance" />
+      <xsd:enumeration value="type-constraint" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxRefKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="compound" />
+      <xsd:enumeration value="member" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxMemberKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="define" />
+      <xsd:enumeration value="property" />
+      <xsd:enumeration value="event" />
+      <xsd:enumeration value="variable" />
+      <xsd:enumeration value="typedef" />
+      <xsd:enumeration value="enum" />
+      <xsd:enumeration value="function" />
+      <xsd:enumeration value="signal" />
+      <xsd:enumeration value="prototype" />
+      <xsd:enumeration value="friend" />
+      <xsd:enumeration value="dcop" />
+      <xsd:enumeration value="slot" />
+      <xsd:enumeration value="interface" />
+      <xsd:enumeration value="service" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxProtectionKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="public" />
+      <xsd:enumeration value="protected" />
+      <xsd:enumeration value="private" />
+      <xsd:enumeration value="package" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxRefQualifierKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="lvalue" />
+      <xsd:enumeration value="rvalue" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxLanguage">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="Unknown" />
+      <xsd:enumeration value="IDL" />
+      <xsd:enumeration value="Java" />
+      <xsd:enumeration value="C#" />
+      <xsd:enumeration value="D" />
+      <xsd:enumeration value="PHP" />
+      <xsd:enumeration value="Objective-C" />
+      <xsd:enumeration value="C++" />
+      <xsd:enumeration value="JavaScript" />
+      <xsd:enumeration value="Python" />
+      <xsd:enumeration value="Fortran" />
+      <xsd:enumeration value="VHDL" />
+      <xsd:enumeration value="XML" />
+      <xsd:enumeration value="SQL" />
+      <xsd:enumeration value="Markdown" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVirtualKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="non-virtual" />
+      <xsd:enumeration value="virtual" />
+      <xsd:enumeration value="pure-virtual" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxCompoundKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="class" />
+      <xsd:enumeration value="struct" />
+      <xsd:enumeration value="union" />
+      <xsd:enumeration value="interface" />
+      <xsd:enumeration value="protocol" />
+      <xsd:enumeration value="category" />
+      <xsd:enumeration value="exception" />
+      <xsd:enumeration value="service" />
+      <xsd:enumeration value="singleton" />
+      <xsd:enumeration value="module" />
+      <xsd:enumeration value="type" />
+      <xsd:enumeration value="file" />
+      <xsd:enumeration value="namespace" />
+      <xsd:enumeration value="group" />
+      <xsd:enumeration value="page" />
+      <xsd:enumeration value="example" />
+      <xsd:enumeration value="dir" />
+      <xsd:enumeration value="concept" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxSectionKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="user-defined" />
+      <xsd:enumeration value="public-type" />
+      <xsd:enumeration value="public-func" />
+      <xsd:enumeration value="public-attrib" />
+      <xsd:enumeration value="public-slot" />
+      <xsd:enumeration value="signal" />
+      <xsd:enumeration value="dcop-func" />
+      <xsd:enumeration value="property" />
+      <xsd:enumeration value="event" />
+      <xsd:enumeration value="public-static-func" />
+      <xsd:enumeration value="public-static-attrib" />
+      <xsd:enumeration value="protected-type" />
+      <xsd:enumeration value="protected-func" />
+      <xsd:enumeration value="protected-attrib" />
+      <xsd:enumeration value="protected-slot" />
+      <xsd:enumeration value="protected-static-func" />
+      <xsd:enumeration value="protected-static-attrib" />
+      <xsd:enumeration value="package-type" />
+      <xsd:enumeration value="package-func" />
+      <xsd:enumeration value="package-attrib" />
+      <xsd:enumeration value="package-static-func" />
+      <xsd:enumeration value="package-static-attrib" />
+      <xsd:enumeration value="private-type" />
+      <xsd:enumeration value="private-func" />
+      <xsd:enumeration value="private-attrib" />
+      <xsd:enumeration value="private-slot" />
+      <xsd:enumeration value="private-static-func" />
+      <xsd:enumeration value="private-static-attrib" />
+      <xsd:enumeration value="friend" />
+      <xsd:enumeration value="related" />
+      <xsd:enumeration value="define" />
+      <xsd:enumeration value="prototype" />
+      <xsd:enumeration value="typedef" />
+      <xsd:enumeration value="enum" />
+      <xsd:enumeration value="func" />
+      <xsd:enumeration value="var" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxHighlightClass">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="comment" />
+      <xsd:enumeration value="normal" />
+      <xsd:enumeration value="preprocessor" />
+      <xsd:enumeration value="keyword" />
+      <xsd:enumeration value="keywordtype" />
+      <xsd:enumeration value="keywordflow" />
+      <xsd:enumeration value="stringliteral" />
+      <xsd:enumeration value="charliteral" />
+      <xsd:enumeration value="vhdlkeyword" />
+      <xsd:enumeration value="vhdllogic" />
+      <xsd:enumeration value="vhdlchar" />
+      <xsd:enumeration value="vhdldigit" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxSimpleSectKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="see" />
+      <xsd:enumeration value="return" />
+      <xsd:enumeration value="author" />
+      <xsd:enumeration value="authors" />
+      <xsd:enumeration value="version" />
+      <xsd:enumeration value="since" />
+      <xsd:enumeration value="date" />
+      <xsd:enumeration value="note" />
+      <xsd:enumeration value="warning" />
+      <xsd:enumeration value="pre" />
+      <xsd:enumeration value="post" />
+      <xsd:enumeration value="copyright" />
+      <xsd:enumeration value="invariant" />
+      <xsd:enumeration value="remark" />
+      <xsd:enumeration value="attention" />
+      <xsd:enumeration value="par" />
+      <xsd:enumeration value="rcs" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVersionNumber">
+    <xsd:restriction base="xsd:string">
+      <xsd:pattern value="\d+\.\d+.*" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxImageKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="html" />
+      <xsd:enumeration value="latex" />
+      <xsd:enumeration value="docbook" />
+      <xsd:enumeration value="rtf" />
+      <xsd:enumeration value="xml" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxPlantumlEngine">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="uml"/>
+      <xsd:enumeration value="bpm"/>
+      <xsd:enumeration value="wire"/>
+      <xsd:enumeration value="dot"/>
+      <xsd:enumeration value="ditaa"/>
+      <xsd:enumeration value="salt"/>
+      <xsd:enumeration value="math"/>
+      <xsd:enumeration value="latex"/>
+      <xsd:enumeration value="gantt"/>
+      <xsd:enumeration value="mindmap"/>
+      <xsd:enumeration value="wbs"/>
+      <xsd:enumeration value="yaml"/>
+      <xsd:enumeration value="creole"/>
+      <xsd:enumeration value="json"/>
+      <xsd:enumeration value="flow"/>
+      <xsd:enumeration value="board"/>
+      <xsd:enumeration value="git"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxParamListKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="param" />
+      <xsd:enumeration value="retval" />
+      <xsd:enumeration value="exception" />
+      <xsd:enumeration value="templateparam" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxCharRange">
+    <xsd:restriction base="xsd:string">
+      <xsd:pattern value="[aeiouncAEIOUNC]" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxParamDir">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="in"/>
+      <xsd:enumeration value="out"/>
+      <xsd:enumeration value="inout"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxAccessor">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="retain"/>
+      <xsd:enumeration value="copy"/>
+      <xsd:enumeration value="assign"/>
+      <xsd:enumeration value="weak"/>
+      <xsd:enumeration value="strong"/>
+      <xsd:enumeration value="unretained"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxAlign">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="left"/>
+      <xsd:enumeration value="right"/>
+      <xsd:enumeration value="center"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxVerticalAlign">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="bottom"/>
+      <xsd:enumeration value="top"/>
+      <xsd:enumeration value="middle"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="DoxOlType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="1" />
+      <xsd:enumeration value="a" />
+      <xsd:enumeration value="A" />
+      <xsd:enumeration value="i" />
+      <xsd:enumeration value="I" />
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
+
diff --git a/docs/xml/config-commands_8md.xml b/docs/xml/config-commands_8md.xml
new file mode 100644
index 0000000..4eb0949
--- /dev/null
+++ b/docs/xml/config-commands_8md.xml
@@ -0,0 +1,179 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config-commands_8md" kind="file" language="Markdown">
+    <compoundname>config-commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Configuration<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`config`<sp/>command<sp/>allows<sp/>you<sp/>to<sp/>set<sp/>up<sp/>and<sp/>manage<sp/>configuration<sp/>settings<sp/>for<sp/>Penify<sp/>CLI.<sp/>This<sp/>document<sp/>explains<sp/>all<sp/>available<sp/>configuration<sp/>options<sp/>and<sp/>how<sp/>to<sp/>use<sp/>them.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>stores<sp/>configuration<sp/>in<sp/>a<sp/>JSON<sp/>file<sp/>at<sp/>`~/.penify/config.json`.<sp/>The<sp/>configuration<sp/>includes:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>LLM<sp/>(Large<sp/>Language<sp/>Model)<sp/>settings<sp/>for<sp/>local<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>JIRA<sp/>integration<sp/>settings<sp/>for<sp/>enhanced<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>tokens<sp/>and<sp/>other<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>LLM<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Web<sp/>Interface</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Running<sp/>`penify<sp/>config<sp/>llm`<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>in<sp/>your<sp/>browser<sp/>where<sp/>you<sp/>can<sp/>configure:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**Model**:<sp/>The<sp/>LLM<sp/>model<sp/>to<sp/>use<sp/>(e.g.,<sp/>`gpt-3.5-turbo`)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**API<sp/>Base<sp/>URL**:<sp/>The<sp/>endpoint<sp/>URL<sp/>for<sp/>your<sp/>LLM<sp/>API<sp/>(e.g.,<sp/>`https://api.openai.com/v1`)</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**API<sp/>Key**:<sp/>Your<sp/>authentication<sp/>key<sp/>for<sp/>the<sp/>LLM<sp/>API</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Supported<sp/>LLMs</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>supports<sp/>various<sp/>LLM<sp/>providers:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>OpenAI</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`gpt-3.5-turbo`<sp/>or<sp/>`gpt-4`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`https://api.openai.com/v1`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>OpenAI<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Anthropic</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`claude-instant-1`<sp/>or<sp/>`claude-2`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`https://api.anthropic.com/v1`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>Anthropic<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Ollama<sp/>(Local)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>`llama2`<sp/>or<sp/>any<sp/>model<sp/>you<sp/>have<sp/>installed</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>`http://localhost:11434`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>(leave<sp/>blank)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Azure<sp/>OpenAI</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model:<sp/>Your<sp/>deployed<sp/>model<sp/>name</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Base:<sp/>Your<sp/>Azure<sp/>endpoint</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>Key:<sp/>Your<sp/>Azure<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Configuration<sp/>File<sp/>Structure</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>configuration,<sp/>your<sp/>`~/.penify/config.json`<sp/>will<sp/>contain:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;model&quot;:<sp/>&quot;gpt-3.5-turbo&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com/v1&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_key&quot;:<sp/>&quot;sk-...&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>JIRA<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Web<sp/>Interface</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Running<sp/>`penify<sp/>config<sp/>jira`<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>where<sp/>you<sp/>can<sp/>configure:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**JIRA<sp/>URL**:<sp/>Your<sp/>JIRA<sp/>instance<sp/>URL<sp/>(e.g.,<sp/>`https://yourcompany.atlassian.net`)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**Username**:<sp/>Your<sp/>JIRA<sp/>username<sp/>(typically<sp/>your<sp/>email)</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**API<sp/>Token**:<sp/>Your<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Creating<sp/>a<sp/>JIRA<sp/>API<sp/>Token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Log<sp/>in<sp/>to<sp/>[https://id.atlassian.com/manage-profile/security/api-tokens](https://id.atlassian.com/manage-profile/security/api-tokens)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Click<sp/>&quot;Create<sp/>API<sp/>token&quot;</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Give<sp/>it<sp/>a<sp/>name<sp/>(e.g.,<sp/>&quot;Penify<sp/>CLI&quot;)</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Copy<sp/>the<sp/>generated<sp/>token<sp/>and<sp/>paste<sp/>it<sp/>into<sp/>the<sp/>configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Configuration<sp/>File<sp/>Structure</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>configuration,<sp/>your<sp/>`~/.penify/config.json`<sp/>will<sp/>contain:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;url&quot;:<sp/>&quot;https://yourcompany.atlassian.net&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;username&quot;:<sp/>&quot;your.email@example.com&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_token&quot;:<sp/>&quot;your-jira-api-token&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Locations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>looks<sp/>for<sp/>configuration<sp/>in<sp/>multiple<sp/>locations:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Project-specific:<sp/>`.penify/config.json`<sp/>in<sp/>the<sp/>Git<sp/>repository<sp/>root</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>User-specific:<sp/>`~/.penify/config.json`<sp/>in<sp/>your<sp/>home<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>project-specific<sp/>configuration<sp/>takes<sp/>precedence<sp/>if<sp/>both<sp/>exist.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Environment<sp/>Variables</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>override<sp/>configuration<sp/>settings<sp/>using<sp/>environment<sp/>variables:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_API_TOKEN`:<sp/>Override<sp/>the<sp/>stored<sp/>API<sp/>token</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_MODEL`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>model</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_API_BASE`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>API<sp/>base<sp/>URL</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_LLM_API_KEY`:<sp/>Override<sp/>the<sp/>configured<sp/>LLM<sp/>API<sp/>key</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_URL`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>URL</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_USER`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>username</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_JIRA_TOKEN`:<sp/>Override<sp/>the<sp/>configured<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example:</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_LLM_MODEL=&quot;gpt-4&quot;</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command-Line<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>advanced<sp/>users<sp/>or<sp/>scripting,<sp/>you<sp/>can<sp/>directly<sp/>edit<sp/>the<sp/>configuration<sp/>file:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>View<sp/>current<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>~/.penify/config.json</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Edit<sp/>configuration<sp/>with<sp/>your<sp/>preferred<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">nano<sp/>~/.penify/config.json</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Sharing<sp/>Configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>share<sp/>configuration<sp/>between<sp/>machines<sp/>by<sp/>copying<sp/>the<sp/>`.penify/config.json`<sp/>file.<sp/>However,<sp/>be<sp/>cautious<sp/>with<sp/>API<sp/>keys<sp/>and<sp/>credentials.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>team<sp/>settings,<sp/>consider:</highlight></codeline>
+<codeline><highlight class="normal">1.<sp/>Using<sp/>a<sp/>project-specific<sp/>`.penify/config.json`<sp/>with<sp/>shared<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Excluding<sp/>API<sp/>keys<sp/>from<sp/>shared<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Using<sp/>environment<sp/>variables<sp/>for<sp/>sensitive<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;Error<sp/>reading<sp/>configuration<sp/>file&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>if<sp/>the<sp/>file<sp/>exists:<sp/>`ls<sp/>-la<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>it<sp/>contains<sp/>valid<sp/>JSON:<sp/>`cat<sp/>~/.penify/config.json`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>LLM<sp/>API&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>API<sp/>base<sp/>URL<sp/>and<sp/>API<sp/>key</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>network<sp/>connectivity<sp/>to<sp/>the<sp/>API<sp/>endpoint</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>account<sp/>has<sp/>access<sp/>to<sp/>the<sp/>specified<sp/>model</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>JIRA<sp/>URL<sp/>format<sp/>(should<sp/>include<sp/>`https://`)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>username<sp/>and<sp/>API<sp/>token</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>your<sp/>JIRA<sp/>account<sp/>has<sp/>API<sp/>access<sp/>permissions</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/config__command_8py.xml b/docs/xml/config__command_8py.xml
new file mode 100644
index 0000000..53169fa
--- /dev/null
+++ b/docs/xml/config__command_8py.xml
@@ -0,0 +1,101 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config__command_8py" kind="file" language="Python">
+    <compoundname>config_command.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1config__command">penify_hook::config_command</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1config__command" refkind="compound"><highlight class="normal"></highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4" refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" kindref="member">setup_config_parser</ref>(parent_parser):</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>Create<sp/>subparsers<sp/>for<sp/>config<sp/>types</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>configuration<sp/>parsers<sp/>with<sp/>subcommands<sp/>for<sp/>LLM<sp/>and<sp/>JIRA<sp/>settings.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>parent_parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;config_type&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;config_type&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>llm</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser<sp/>=<sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;llm-cmd&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>LLM<sp/>settings.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--model&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;LLM<sp/>model<sp/>to<sp/>use&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-base&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;API<sp/>base<sp/>URL<sp/>for<sp/>the<sp/>LLM<sp/>service&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>llm_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-key&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;API<sp/>key<sp/>for<sp/>the<sp/>LLM<sp/>service&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>llm-web</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;llm&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>LLM<sp/>settings<sp/>through<sp/>a<sp/>web<sp/>interface&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>jira</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser<sp/>=<sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;jira-cmd&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>JIRA<sp/>settings.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--url&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>base<sp/>URL&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--username&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>username<sp/>or<sp/>email&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--api-token&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;JIRA<sp/>API<sp/>token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/>jira_config_parser.add_argument(</highlight><highlight class="stringliteral">&quot;--verify&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Verify<sp/>JIRA<sp/>connection&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Config<sp/>subcommand:<sp/>jira-web</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_parser(</highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>a<sp/>web<sp/>interface&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>all<sp/>other<sp/>necessary<sp/>arguments<sp/>for<sp/>config<sp/>command</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="31" refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" kindref="member">handle_config</ref>(args):</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"></highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>config<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>configuration<sp/>settings<sp/>based<sp/>on<sp/>the<sp/>specified<sp/>config<sp/>type.</highlight></codeline>
+<codeline lineno="38"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>different<sp/>types<sp/>of<sp/>configurations<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>LLM<sp/>(Language</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/>Model)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA.<sp/>It<sp/>saves<sp/>configurations,<sp/>sets<sp/>up<sp/>web-based<sp/>configurations,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>verifies<sp/>JIRA<sp/>connections.<sp/>Depending<sp/>on<sp/>the<sp/>`args.config_type`,<sp/>it<sp/>imports</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>necessary<sp/>modules,<sp/>handles<sp/>configuration<sp/>saving<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>setup,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>optionally</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>verifies<sp/>JIRA<sp/>connectivity.</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>(argparse.Namespace):<sp/>Command-line<sp/>arguments<sp/>containing<sp/>the<sp/>type<sp/>of<sp/>configuration<sp/>to<sp/>handle.</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="48"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;llm-cmd&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>save_llm_config</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(args.model,<sp/>args.api_base,<sp/>args.api_key)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>set:<sp/>Model={args.model},<sp/>API<sp/>Base={args.api_base<sp/>or<sp/>&apos;default&apos;}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;llm&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_llm_web</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>()</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;jira-cmd&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>save_jira_config</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(args.url,<sp/>args.username,<sp/>args.api_token)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>set:<sp/>URL={args.url},<sp/>Username={args.username}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1jira__client" kindref="compound">penify_hook.jira_client</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JiraClient<sp/><sp/></highlight><highlight class="comment">#<sp/>Import<sp/>moved<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>connection<sp/>if<sp/>requested</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.verify:</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>JiraClient:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_client<sp/>=<sp/>JiraClient(</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=args.url,</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=args.username,</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=args.api_token</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_client.is_connected():</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>connection<sp/>verified<sp/>successfully!&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>connect<sp/>to<sp/>JIRA.<sp/>Please<sp/>check<sp/>your<sp/>credentials.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>package<sp/>not<sp/>installed.<sp/>Cannot<sp/>verify<sp/>connection.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.config_type<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_jira_web</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>()</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Please<sp/>specify<sp/>a<sp/>config<sp/>type:<sp/>llm,<sp/>jira&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/config__commands_8py.xml b/docs/xml/config__commands_8py.xml
new file mode 100644
index 0000000..6eaf2f6
--- /dev/null
+++ b/docs/xml/config__commands_8py.xml
@@ -0,0 +1,536 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="config__commands_8py" kind="file" language="Python">
+    <compoundname>config_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1config__commands">penify_hook::commands::config_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1config__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>random</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pkg_resources</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>threading<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Thread</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Dict,<sp/>Any,<sp/>Optional,<sp/>Union</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>import<sp/>dotenv,<sp/>but<sp/>don&apos;t<sp/>fail<sp/>if<sp/>it&apos;s<sp/>not<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>DOTENV_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>DOTENV_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22" refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()<sp/>-&gt;<sp/>None:</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Load<sp/>environment<sp/>variables<sp/>from<sp/>.env<sp/>files<sp/>in<sp/>various<sp/>locations<sp/>with<sp/>proper</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>priority.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>loads<sp/>environment<sp/>variables<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.env<sp/>files<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>different</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>directories,<sp/>prioritizing<sp/>the<sp/>current<sp/>directory<sp/>over<sp/>the<sp/>Git<sp/>repo<sp/>root<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/>user<sp/>home<sp/>directory.<sp/>The<sp/>loading<sp/>process<sp/>ensures<sp/>that<sp/>later<sp/>files<sp/>override</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>earlier<sp/>ones.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>.env<sp/>file<sp/>loading<sp/>is<sp/>disabled.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>user<sp/>home<sp/>directory<sp/>(lowest<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_env<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>home_env.exists():</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=home_env,<sp/>override=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>load<sp/>.env<sp/>from<sp/>home<sp/>directory:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>Git<sp/>repo<sp/>root<sp/>(medium<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repo_root<sp/>!=<sp/>str(Path.home()):</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_env<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_env.exists()<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repo_env<sp/>!=<sp/>home_env:</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=repo_env,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>load<sp/>.env<sp/>from<sp/>Git<sp/>repo:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Load<sp/>from<sp/>current<sp/>directory<sp/>(highest<sp/>priority)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>current_env<sp/>=<sp/>Path(os.getcwd())<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_env.exists()<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>current_env<sp/>!=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=current_env,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Load<sp/>environment<sp/>variables<sp/>when<sp/>module<sp/>is<sp/>imported</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"></highlight></codeline>
+<codeline lineno="66" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()<sp/>-&gt;<sp/>Path:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Returns<sp/>the<sp/>path<sp/>to<sp/>the<sp/>`config.json`<sp/>file<sp/>within<sp/>the<sp/>`.penify`<sp/>directory,</highlight></codeline>
+<codeline lineno="68"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>creating<sp/>it<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>necessary.</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="69"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="70"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>home_dir:</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path.home()</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>home_dir<sp/>=<sp/>Path(home_dir)</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/>penify_dir<sp/>=<sp/>home_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>penify_dir.exists():</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>the<sp/>.penify<sp/>directory<sp/>if<sp/>it<sp/>doesn&apos;t<sp/>exist</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.makedirs(penify_dir,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>the<sp/>.penify<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.makedirs(penify_dir,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>an<sp/>empty<sp/>config.json<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json.dump({},<sp/>f)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>penify_dir<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;config.json&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"></highlight></codeline>
+<codeline lineno="95" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(env_var:<sp/>str,<sp/>default:<sp/>Any<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>Any:</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Get<sp/>environment<sp/>variable<sp/>or<sp/>return<sp/>default<sp/>value.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>os.environ.get(env_var,<sp/>default)</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight></codeline>
+<codeline lineno="100" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(model,<sp/>api_base,<sp/>api_key):</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Save<sp/>LLM<sp/>configuration<sp/>settings<sp/>to<sp/>an<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="102"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>saves<sp/>the<sp/>LLM<sp/>configuration<sp/>following<sp/>a<sp/>specific<sp/>priority:<sp/>1.<sp/>Git</highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>repo<sp/>root<sp/>.env<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>inside<sp/>a<sp/>git<sp/>repo)<sp/>2.<sp/>User<sp/>home<sp/>directory<sp/>.env<sp/><sp/>It<sp/>handles</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>detection<sp/>of<sp/>the<sp/>Git<sp/>repo<sp/>root,<sp/>reads<sp/>the<sp/>existing<sp/>.env<sp/>content,<sp/>updates<sp/>it</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>new<sp/>LLM<sp/>configuration,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>writes<sp/>it<sp/>back<sp/>to<sp/>the<sp/>file.<sp/>It<sp/>also<sp/>reloads</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>environment<sp/>variables<sp/>to<sp/>make<sp/>changes<sp/>immediately<sp/>available.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model<sp/>(str):<sp/>The<sp/>name<sp/>of<sp/>the<sp/>language<sp/>model.</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base<sp/>(str):<sp/>The<sp/>base<sp/>URL<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>(str):<sp/>The<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>authentication.</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>configuration<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>saved<sp/>successfully,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>find<sp/>Git<sp/>repo<sp/>root</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>determine<sp/>Git<sp/>repo<sp/>root:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>LLM<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_MODEL&apos;</highlight><highlight class="normal">]<sp/>=<sp/>model</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_BASE&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_base</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_KEY&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Reload<sp/>environment<sp/>variables<sp/>to<sp/>make<sp/>changes<sp/>immediately<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=env_file,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"></highlight></codeline>
+<codeline lineno="167" refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(url,<sp/>username,<sp/>api_token):</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Save<sp/>JIRA<sp/>configuration<sp/>settings<sp/>to<sp/>a<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="169"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="170"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>saves<sp/>JIRA<sp/>configuration<sp/>following<sp/>these<sp/>steps:<sp/>1.<sp/>Determine<sp/>the</highlight></codeline>
+<codeline lineno="171"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>target<sp/>.env<sp/>file<sp/>location<sp/>based<sp/>on<sp/>whether<sp/>the<sp/>current<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>inside<sp/>a</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/>Git<sp/>repository.<sp/>2.<sp/>If<sp/>inside<sp/>a<sp/>Git<sp/>repo,<sp/>use<sp/>the<sp/>Git<sp/>repo<sp/>root</highlight><highlight class="stringliteral">&apos;s<sp/>.env<sp/>file;</highlight></codeline>
+<codeline lineno="173"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>otherwise,<sp/>use<sp/>the<sp/>user<sp/>home<sp/>directory&apos;s<sp/>.env<sp/>file.<sp/>3.<sp/>Read<sp/>the<sp/>existing</highlight></codeline>
+<codeline lineno="174"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>content<sp/>of<sp/>the<sp/>.env<sp/>file<sp/>(</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>it<sp/>exists)<sp/>to<sp/>preserve<sp/>other<sp/>settings.<sp/>4.<sp/>Update</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>.env<sp/>content<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>new<sp/>JIRA<sp/>configuration.<sp/>5.<sp/>Write<sp/>the<sp/>updated<sp/>content</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/>back<sp/>to<sp/>the<sp/>.env<sp/>file.<sp/>6.<sp/>Optionally,<sp/>reload<sp/>environment<sp/>variables<sp/>to<sp/>make</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>changes<sp/>immediately<sp/>available.</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>(str):<sp/>The<sp/>JIRA<sp/>URL<sp/>to<sp/>be<sp/>saved<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>username<sp/>(str):<sp/>The<sp/>JIRA<sp/>username<sp/>to<sp/>be<sp/>saved<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_token<sp/>(str):<sp/>The<sp/>JIRA<sp/>API<sp/>token<sp/>to<sp/>be<sp/>saved<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>.env<sp/>file.</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>configuration<sp/>was<sp/>successfully<sp/>saved,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="187"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;python-dotenv<sp/>is<sp/>not<sp/>installed.<sp/>Run<sp/>&apos;pip<sp/>install<sp/>python-dotenv&apos;<sp/>to<sp/>enable<sp/>.env<sp/>file<sp/>support.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>find<sp/>Git<sp/>repo<sp/>root</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_root<sp/>=<sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(current_dir)</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path(repo_root)<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>repo_root<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>determine<sp/>Git<sp/>repo<sp/>root:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_file<sp/>=<sp/>Path.home()<sp/>/<sp/></highlight><highlight class="stringliteral">&apos;.env&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>existing<sp/>.env<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content<sp/>=<sp/>{}</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_file.exists():</highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>line<sp/>=<sp/>line.strip()</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;#&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>line:</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key,<sp/>value<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;=&apos;</highlight><highlight class="normal">,<sp/>1)</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>env_content[key.strip()]<sp/>=<sp/>value.strip()</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>JIRA<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_URL&apos;</highlight><highlight class="normal">]<sp/>=<sp/>url</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_USER&apos;</highlight><highlight class="normal">]<sp/>=<sp/>username</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/>env_content[</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_TOKEN&apos;</highlight><highlight class="normal">]<sp/>=<sp/>api_token</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Write<sp/>back<sp/>to<sp/>.env<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(env_file,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key,<sp/>value<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>env_content.items():</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f.write(f</highlight><highlight class="stringliteral">&quot;{key}={value}\n&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>saved<sp/>to<sp/>{env_file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Reload<sp/>environment<sp/>variables<sp/>to<sp/>make<sp/>changes<sp/>immediately<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>dotenv<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>load_dotenv</highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>load_dotenv(dotenv_path=env_file,<sp/>override=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>JIRA<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="235"><highlight class="normal"></highlight></codeline>
+<codeline lineno="236"><highlight class="normal"></highlight></codeline>
+<codeline lineno="237" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()<sp/>-&gt;<sp/>Dict[str,<sp/>str]:</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>LLM<sp/>configuration<sp/>from<sp/>environment<sp/>variables.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>values<sp/>from<sp/>environment<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_MODEL&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_BASE&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_LLM_API_KEY&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>empty<sp/>values</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{k:<sp/>v<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>k,<sp/>v<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>config.items()<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>v}</highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config</highlight></codeline>
+<codeline lineno="254"><highlight class="normal"></highlight></codeline>
+<codeline lineno="255"><highlight class="normal"></highlight></codeline>
+<codeline lineno="256" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()<sp/>-&gt;<sp/>Dict[str,<sp/>str]:</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>JIRA<sp/>configuration<sp/>from<sp/>environment<sp/>variables.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>values<sp/>from<sp/>environment<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_URL&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_USER&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">),</highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_JIRA_TOKEN&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>empty<sp/>values</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/>config<sp/>=<sp/>{k:<sp/>v<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>k,<sp/>v<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>config.items()<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>v}</highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"></highlight></codeline>
+<codeline lineno="274"><highlight class="normal"></highlight></codeline>
+<codeline lineno="275" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>():</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Starts<sp/>an<sp/>HTTP<sp/>server<sp/>for<sp/>configuring<sp/>LLM<sp/>settings<sp/>via<sp/>a<sp/>web<sp/>interface.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/>server_url<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;http://localhost:{redirect_port}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Starting<sp/>configuration<sp/>server<sp/>on<sp/>{server_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">ConfigHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"></highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>HTTP<sp/>GET<sp/>requests<sp/>and<sp/>serve<sp/>appropriate<sp/>responses<sp/>based<sp/>on<sp/>path.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="286" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>the<sp/>template<sp/>HTML<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>template_path<sp/>=<sp/>pkg_resources.resource_filename(</highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify_hook&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;templates/llm_config.html&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(template_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>f.read()</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(content.encode())</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/get_config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>current<sp/>LLM<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_config:</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:<sp/>current_config</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>configuration<sp/>found&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/plain&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(b</highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_POST(self):</highlight></codeline>
+<codeline lineno="327"><highlight class="normal"></highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>POST<sp/>requests<sp/>to<sp/>save<sp/>language<sp/>model<sp/>configuration<sp/>data.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/save&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content_length<sp/>=<sp/>int(self.headers[</highlight><highlight class="stringliteral">&apos;Content-Length&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>post_data<sp/>=<sp/>self.rfile.read(content_length)</highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data<sp/>=<sp/>json.loads(post_data.decode())</highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(model,<sp/>api_base,<sp/>api_key)</highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;LLM<sp/>configuration<sp/>saved<sp/>successfully.<sp/>Using<sp/>model:<sp/>{model}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(500)</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps({</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">}).encode())</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Suppresses<sp/>log<sp/>messages.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="371"><highlight class="normal"></highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>ConfigHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>configuration<sp/>page<sp/>in<sp/>your<sp/>browser...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>webbrowser.open(server_url)</highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Waiting<sp/>for<sp/>configuration<sp/>to<sp/>be<sp/>submitted...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Configuration<sp/>completed.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"></highlight></codeline>
+<codeline lineno="380"><highlight class="normal"></highlight></codeline>
+<codeline lineno="381" refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>():</highlight></codeline>
+<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Starts<sp/>a<sp/>web<sp/>server<sp/>for<sp/>configuring<sp/>JIRA<sp/>settings.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/>redirect_port<sp/>=<sp/>random.randint(30000,<sp/>50000)</highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/>server_url<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;http://localhost:{redirect_port}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Starting<sp/>configuration<sp/>server<sp/>on<sp/>{server_url}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">ConfigHandler(http.server.SimpleHTTPRequestHandler):</highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_GET(self):</highlight></codeline>
+<codeline lineno="390"><highlight class="normal"></highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>GET<sp/>requests<sp/>by<sp/>serving<sp/>HTML,<sp/>JSON,<sp/>or<sp/>404<sp/>responses<sp/>based<sp/>on<sp/>the<sp/>path.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/html&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Read<sp/>the<sp/>template<sp/>HTML<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>template_path<sp/>=<sp/>pkg_resources.resource_filename(</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify_hook&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;templates/jira_config.html&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(template_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>f.read()</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(content.encode())</highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/get_config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>current<sp/>JIRA<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_config<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>current_config:</highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:<sp/>current_config</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>JIRA<sp/>configuration<sp/>found&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="428"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;text/plain&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(b</highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"></highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">do_POST(self):</highlight></codeline>
+<codeline lineno="433"><highlight class="normal"></highlight></codeline>
+<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>HTTP<sp/>POST<sp/>requests<sp/>to<sp/>save<sp/>JIRA<sp/>configuration.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.path<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;/save&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content_length<sp/>=<sp/>int(self.headers[</highlight><highlight class="stringliteral">&apos;Content-Length&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>post_data<sp/>=<sp/>self.rfile.read(content_length)</highlight></codeline>
+<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data<sp/>=<sp/>json.loads(post_data.decode())</highlight></codeline>
+<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>url<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>username<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_token<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="443"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verify<sp/>=<sp/>data.get(</highlight><highlight class="stringliteral">&apos;verify&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Save<sp/>the<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(url,<sp/>username,<sp/>api_token)</highlight></codeline>
+<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>connection<sp/>option<sp/>is<sp/>handled<sp/>in<sp/>main.py</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="450"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(200)</highlight></codeline>
+<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="452"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;JIRA<sp/>configuration<sp/>saved<sp/>successfully.&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="456"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="457"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="458"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="459"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Schedule<sp/>the<sp/>server<sp/>shutdown</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="460"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread<sp/>=<sp/>Thread(target=self.server.shutdown)</highlight></codeline>
+<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.daemon<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="462"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thread.start()</highlight></codeline>
+<codeline lineno="463"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="464"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="465"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(500)</highlight></codeline>
+<codeline lineno="466"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="467"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="468"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>configuration:<sp/>{str(e)}&quot;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="469"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps(response).encode())</highlight></codeline>
+<codeline lineno="470"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="471"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_response(404)</highlight></codeline>
+<codeline lineno="472"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.send_header(</highlight><highlight class="stringliteral">&quot;Content-type&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;application/json&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="473"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.end_headers()</highlight></codeline>
+<codeline lineno="474"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.wfile.write(json.dumps({</highlight><highlight class="stringliteral">&quot;success&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;message&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Not<sp/>Found&quot;</highlight><highlight class="normal">}).encode())</highlight></codeline>
+<codeline lineno="475"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="476"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">log_message(self,<sp/>format,<sp/>*args):</highlight></codeline>
+<codeline lineno="477"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>log<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="478"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Suppresses<sp/>log<sp/>messages.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="479"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="480"><highlight class="normal"></highlight></codeline>
+<codeline lineno="481"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>socketserver.TCPServer((</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/>redirect_port),<sp/>ConfigHandler)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>httpd:</highlight></codeline>
+<codeline lineno="482"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Opening<sp/>configuration<sp/>page<sp/>in<sp/>your<sp/>browser...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="483"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>webbrowser.open(server_url)</highlight></codeline>
+<codeline lineno="484"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Waiting<sp/>for<sp/>configuration<sp/>to<sp/>be<sp/>submitted...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="485"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>httpd.serve_forever()</highlight></codeline>
+<codeline lineno="486"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="487"><highlight class="normal"><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;Configuration<sp/>completed.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="488"><highlight class="normal"></highlight></codeline>
+<codeline lineno="489"><highlight class="normal"></highlight></codeline>
+<codeline lineno="490" refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()<sp/>-&gt;<sp/>Optional[str]:</highlight></codeline>
+<codeline lineno="491"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>environment<sp/>variables<sp/>are<sp/>loaded<sp/>from<sp/>all<sp/>.env<sp/>files</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="492"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieves<sp/>an<sp/>API<sp/>token<sp/>using<sp/>a<sp/>prioritized<sp/>method.</highlight></codeline>
+<codeline lineno="493"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="494"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>first<sp/>attempts<sp/>to<sp/>load<sp/>environment<sp/>variables<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>all<sp/>`.env`</highlight></codeline>
+<codeline lineno="495"><highlight class="normal"><sp/><sp/><sp/><sp/>files<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>`PENIFY_API_TOKEN`<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>set.<sp/>If</highlight></codeline>
+<codeline lineno="496"><highlight class="normal"><sp/><sp/><sp/><sp/>found,<sp/>it<sp/>returns<sp/>the<sp/>token.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal">,<sp/>it<sp/>looks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a</highlight></codeline>
+<codeline lineno="497"><highlight class="normal"><sp/><sp/><sp/><sp/>configuration<sp/>file<sp/>named<sp/></highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">.<sp/>If<sp/>both<sp/>methods<sp/>fail,<sp/>it<sp/>returns<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="498"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="499"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="500"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>str<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>The<sp/>API<sp/>token<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>found,<sp/>otherwise<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="501"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="502"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>DOTENV_AVAILABLE:</highlight></codeline>
+<codeline lineno="503"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" kindref="member">load_env_files</ref>()</highlight></codeline>
+<codeline lineno="504"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="505"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>environment<sp/>variable<sp/>first</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="506"><highlight class="normal"><sp/><sp/><sp/><sp/>env_token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" kindref="member">get_env_var_or_default</ref>(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="507"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>env_token:</highlight></codeline>
+<codeline lineno="508"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>env_token</highlight></codeline>
+<codeline lineno="509"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="510"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="511"><highlight class="normal"><sp/><sp/><sp/><sp/>config_file<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="512"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>config_file.exists():</highlight></codeline>
+<codeline lineno="513"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="514"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>f:</highlight></codeline>
+<codeline lineno="515"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>config<sp/>=<sp/>json.load(f)</highlight></codeline>
+<codeline lineno="516"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>config.get(</highlight><highlight class="stringliteral">&apos;api_keys&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="517"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>(json.JSONDecodeError,<sp/>Exception)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="518"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>reading<sp/>.penify<sp/>config<sp/>file:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="519"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="520"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/conftest_8py.xml b/docs/xml/conftest_8py.xml
new file mode 100644
index 0000000..1f83991
--- /dev/null
+++ b/docs/xml/conftest_8py.xml
@@ -0,0 +1,23 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="conftest_8py" kind="file" language="Python">
+    <compoundname>conftest.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1conftest">tests::conftest</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1conftest" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Add<sp/>project<sp/>root<sp/>to<sp/>sys.path<sp/>for<sp/>imports<sp/>to<sp/>work</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal">sys.path.insert(0,<sp/>os.path.abspath(os.path.join(os.path.dirname(__file__),<sp/></highlight><highlight class="stringliteral">&apos;..&apos;</highlight><highlight class="normal">)))</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Common<sp/>fixtures<sp/>can<sp/>be<sp/>added<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/constants_8py.xml b/docs/xml/constants_8py.xml
new file mode 100644
index 0000000..ba635e1
--- /dev/null
+++ b/docs/xml/constants_8py.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="constants_8py" kind="file" language="Python">
+    <compoundname>constants.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1constants">penify_hook::constants</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0" refkind="member"><highlight class="normal">API_URL<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;http://localhost:8000/api&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="2" refid="namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0" refkind="member"><highlight class="normal">DASHBOARD_URL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;https://dashboard.penify.dev/auth/localhost/login&quot;</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/detailed-usage_8md.xml b/docs/xml/detailed-usage_8md.xml
new file mode 100644
index 0000000..cb55f77
--- /dev/null
+++ b/docs/xml/detailed-usage_8md.xml
@@ -0,0 +1,173 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="detailed-usage_8md" kind="file" language="Markdown">
+    <compoundname>detailed-usage.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Detailed<sp/>Usage<sp/>Guide</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>provides<sp/>in-depth<sp/>information<sp/>about<sp/>all<sp/>features<sp/>and<sp/>capabilities<sp/>of<sp/>the<sp/>Penify<sp/>CLI<sp/>tool.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Table<sp/>of<sp/>Contents</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>[Penify<sp/>CLI<sp/>-<sp/>Detailed<sp/>Usage<sp/>Guide](#penify-cli---detailed-usage-guide)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Table<sp/>of<sp/>Contents](#table-of-contents)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Authentication](#authentication)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Login<sp/>Process](#login-process)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[API<sp/>Token<sp/>Storage](#api-token-storage)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Token<sp/>Precedence](#token-precedence)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Command<sp/>Overview](#command-overview)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Commit<sp/>Message<sp/>Generation](#commit-message-generation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Code<sp/>Documentation<sp/>Generation](#code-documentation-generation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Use<sp/>Cases](#use-cases)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Authentication<sp/>Requirement](#authentication-requirement)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Configuration<sp/>Settings](#configuration-settings)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Git<sp/>Hooks](#git-hooks)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Post-Commit<sp/>Hook](#post-commit-hook)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Custom<sp/>Hook<sp/>Location](#custom-hook-location)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Advanced<sp/>Use<sp/>Cases](#advanced-use-cases)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[CI/CD<sp/>Integration](#cicd-integration)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Remote<sp/>Repository<sp/>Documentation](#remote-repository-documentation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Troubleshooting](#troubleshooting)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Common<sp/>Issues](#common-issues)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Logs](#logs)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>-<sp/>[Support](#support)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Authentication</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login<sp/>Process</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>you<sp/>run<sp/>`penify<sp/>login`,<sp/>the<sp/>tool:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Opens<sp/>your<sp/>default<sp/>web<sp/>browser</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Redirects<sp/>you<sp/>to<sp/>Penify&apos;s<sp/>login<sp/>page</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Captures<sp/>the<sp/>authentication<sp/>token<sp/>after<sp/>successful<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Saves<sp/>the<sp/>token<sp/>in<sp/>`~/.penify`<sp/>file</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>API<sp/>Token<sp/>Storage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">API<sp/>tokens<sp/>are<sp/>stored<sp/>in<sp/>your<sp/>home<sp/>directory<sp/>in<sp/>the<sp/>`.penify`<sp/>file.<sp/>This<sp/>JSON<sp/>file<sp/>contains:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```json</highlight></codeline>
+<codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;api_keys&quot;:<sp/>&quot;your-api-token&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{<sp/>&quot;model&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;...&quot;<sp/>},</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{<sp/>&quot;url&quot;:<sp/>&quot;...&quot;,<sp/>&quot;username&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;...&quot;<sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Token<sp/>Precedence</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Environment<sp/>variable<sp/>`PENIFY_API_TOKEN`<sp/>(highest<sp/>priority)</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Token<sp/>in<sp/>`~/.penify`<sp/>file</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">penify</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>commit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>smart<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>config<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>├──<sp/>llm<sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>└──<sp/>jira<sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>login<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>account</highlight></codeline>
+<codeline><highlight class="normal">└──<sp/>docgen<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>code<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>├──<sp/>install-hook<sp/><sp/><sp/><sp/><sp/>Install<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>└──<sp/>uninstall-hook<sp/><sp/><sp/>Remove<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Commit<sp/>Message<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>analyzes<sp/>your<sp/>staged<sp/>changes<sp/>and<sp/>generates<sp/>meaningful<sp/>commit<sp/>messages.<sp/>It<sp/>can:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Use<sp/>a<sp/>local<sp/>LLM<sp/>if<sp/>configured</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Enhance<sp/>messages<sp/>with<sp/>JIRA<sp/>issue<sp/>details</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Provide<sp/>both<sp/>title<sp/>and<sp/>description</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>specific<sp/>options<sp/>and<sp/>examples,<sp/>see<sp/>[docs/commit-commands.md](commit-commands.md).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Code<sp/>Documentation<sp/>Generation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`docgen`<sp/>command<sp/>generates<sp/>documentation<sp/>for<sp/>your<sp/>code:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**Current<sp/>Git<sp/>Diff**:<sp/>Default<sp/>behavior,<sp/>documents<sp/>only<sp/>changed<sp/>files</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**Specific<sp/>File**:<sp/>Pass<sp/>a<sp/>file<sp/>path<sp/>with<sp/>`-l<sp/>path/to/file.py`</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**Entire<sp/>Folder**:<sp/>Pass<sp/>a<sp/>folder<sp/>path<sp/>with<sp/>`-l<sp/>path/to/folder`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Authentication<sp/>Requirement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>feature<sp/>requires<sp/>authentication<sp/>with<sp/>a<sp/>Penify<sp/>account.<sp/>Run<sp/>`penify<sp/>login`<sp/>before<sp/>using<sp/>documentation<sp/>features.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>local<sp/>settings<sp/>using<sp/>the<sp/>`config`<sp/>command:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>**LLM<sp/>Settings**:<sp/>Configure<sp/>a<sp/>local<sp/>LLM<sp/>for<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**JIRA<sp/>Settings**:<sp/>Set<sp/>up<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>detailed<sp/>configuration<sp/>options,<sp/>see<sp/>[docs/config-commands.md](config-commands.md).</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Git<sp/>Hooks</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>can<sp/>install<sp/>Git<sp/>hooks<sp/>to<sp/>automate<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Post-Commit<sp/>Hook</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>**Install**:<sp/>`penify<sp/>docgen<sp/>install-hook`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**What<sp/>it<sp/>does**:<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>**Uninstall**:<sp/>`penify<sp/>docgen<sp/>uninstall-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Custom<sp/>Hook<sp/>Location</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>specify<sp/>a<sp/>custom<sp/>location<sp/>for<sp/>Git<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/git/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>CI/CD<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>CI/CD<sp/>pipelines:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Set<sp/>`PENIFY_API_TOKEN`<sp/>as<sp/>an<sp/>environment<sp/>variable</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Run<sp/>commands<sp/>without<sp/>requiring<sp/>interactive<sp/>login</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Remote<sp/>Repository<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>an<sp/>entire<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/user/repo</highlight></codeline>
+<codeline><highlight class="normal">cd<sp/>repo</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**API<sp/>Key<sp/>Errors**:<sp/>Ensure<sp/>you&apos;ve<sp/>run<sp/>`penify<sp/>login`<sp/>or<sp/>set<sp/>`PENIFY_API_TOKEN`</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>**LLM<sp/>Configuration**:<sp/>Check<sp/>your<sp/>LLM<sp/>settings<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>**JIRA<sp/>Integration**:<sp/>Verify<sp/>JIRA<sp/>credentials<sp/>in<sp/>your<sp/>configuration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Logs</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>more<sp/>detailed<sp/>logs,<sp/>you<sp/>can<sp/>set<sp/>the<sp/>environment<sp/>variable:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Support</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>additional<sp/>help,<sp/>visit<sp/>[https://docs.penify.dev/](https://docs.penify.dev/)<sp/>or<sp/>contact<sp/>support@penify.dev</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml b/docs/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml
new file mode 100644
index 0000000..64ba2d0
--- /dev/null
+++ b/docs/xml/dir_063e2d5fe58a131099a7fe4200cca78c.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_063e2d5fe58a131099a7fe4200cca78c" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</compoundname>
+    <innerfile refid="tests_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="conftest_8py">conftest.py</innerfile>
+    <innerfile refid="test__commit__commands_8py">test_commit_commands.py</innerfile>
+    <innerfile refid="test__config__commands_8py">test_config_commands.py</innerfile>
+    <innerfile refid="test__doc__commands_8py">test_doc_commands.py</innerfile>
+    <innerfile refid="test__web__config_8py">test_web_config.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/dir_1648a057408aae8db85b8e3797335623.xml b/docs/xml/dir_1648a057408aae8db85b8e3797335623.xml
new file mode 100644
index 0000000..300e1cd
--- /dev/null
+++ b/docs/xml/dir_1648a057408aae8db85b8e3797335623.xml
@@ -0,0 +1,11 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_1648a057408aae8db85b8e3797335623" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml b/docs/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
new file mode 100644
index 0000000..52eaaa8
--- /dev/null
+++ b/docs/xml/dir_624fa2a8bce97f0444ac5cca335d4e23.xml
@@ -0,0 +1,17 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_624fa2a8bce97f0444ac5cca335d4e23" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</compoundname>
+    <innerfile refid="penify__hook_2commands_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="auth__commands_8py">auth_commands.py</innerfile>
+    <innerfile refid="commit__commands_8py">commit_commands.py</innerfile>
+    <innerfile refid="config__commands_8py">config_commands.py</innerfile>
+    <innerfile refid="doc__commands_8py">doc_commands.py</innerfile>
+    <innerfile refid="hook__commands_8py">hook_commands.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml b/docs/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml
new file mode 100644
index 0000000..2a7c175
--- /dev/null
+++ b/docs/xml/dir_b3b22d2ab7966b65f6b237e3231b41be.xml
@@ -0,0 +1,15 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_b3b22d2ab7966b65f6b237e3231b41be" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli</compoundname>
+    <innerdir refid="dir_1648a057408aae8db85b8e3797335623">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</innerdir>
+    <innerdir refid="dir_f88c3381c1861b3f7ca1f3d63cf244b5">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</innerdir>
+    <innerdir refid="dir_063e2d5fe58a131099a7fe4200cca78c">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</innerdir>
+    <innerfile refid="setup_8py">setup.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml b/docs/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
new file mode 100644
index 0000000..9f4f478
--- /dev/null
+++ b/docs/xml/dir_f88c3381c1861b3f7ca1f3d63cf244b5.xml
@@ -0,0 +1,27 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="dir_f88c3381c1861b3f7ca1f3d63cf244b5" kind="dir">
+    <compoundname>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</compoundname>
+    <innerdir refid="dir_624fa2a8bce97f0444ac5cca335d4e23">/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</innerdir>
+    <innerfile refid="penify__hook_2____init_____8py">__init__.py</innerfile>
+    <innerfile refid="api__client_8py">api_client.py</innerfile>
+    <innerfile refid="base__analyzer_8py">base_analyzer.py</innerfile>
+    <innerfile refid="commit__analyzer_8py">commit_analyzer.py</innerfile>
+    <innerfile refid="config__command_8py">config_command.py</innerfile>
+    <innerfile refid="constants_8py">constants.py</innerfile>
+    <innerfile refid="file__analyzer_8py">file_analyzer.py</innerfile>
+    <innerfile refid="folder__analyzer_8py">folder_analyzer.py</innerfile>
+    <innerfile refid="git__analyzer_8py">git_analyzer.py</innerfile>
+    <innerfile refid="jira__client_8py">jira_client.py</innerfile>
+    <innerfile refid="llm__client_8py">llm_client.py</innerfile>
+    <innerfile refid="login__command_8py">login_command.py</innerfile>
+    <innerfile refid="main_8py">main.py</innerfile>
+    <innerfile refid="ui__utils_8py">ui_utils.py</innerfile>
+    <innerfile refid="utils_8py">utils.py</innerfile>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/doc__commands_8md.xml b/docs/xml/doc__commands_8md.xml
new file mode 100644
index 0000000..839cd71
--- /dev/null
+++ b/docs/xml/doc__commands_8md.xml
@@ -0,0 +1,340 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="doc__commands_8md" kind="file" language="Markdown">
+    <compoundname>doc_commands.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>-<sp/>Documentation<sp/>Generation<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>provides<sp/>a<sp/>detailed<sp/>guide<sp/>to<sp/>all<sp/>permutations<sp/>and<sp/>combinations<sp/>of<sp/>the<sp/>`docgen`<sp/>command,<sp/>including<sp/>extensive<sp/>information<sp/>about<sp/>Git<sp/>hook<sp/>commands<sp/>for<sp/>automating<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Table<sp/>of<sp/>Contents</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>[Basic<sp/>Usage](#basic-usage)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Command<sp/>Options](#command-options)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Option<sp/>Combinations](#option-combinations)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Git<sp/>Hook<sp/>Commands](#git-hook-commands)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Installation](#hook-installation)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Customization](#hook-customization)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>-<sp/>[Hook<sp/>Uninstallation](#hook-uninstallation)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Advanced<sp/>Use<sp/>Cases](#advanced-use-cases)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>[Troubleshooting](#troubleshooting)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Basic<sp/>Usage</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>this<sp/>command:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Analyzes<sp/>the<sp/>current<sp/>Git<sp/>diff<sp/>(changes<sp/>since<sp/>last<sp/>commit)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>only</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Requires<sp/>authentication<sp/>via<sp/>`penify<sp/>login`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Command<sp/>Options</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>`-l,<sp/>--location`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Specify<sp/>a<sp/>target<sp/>for<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/file.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/folder</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Without<sp/>this<sp/>flag,<sp/>Penify<sp/>analyzes<sp/>only<sp/>Git-tracked<sp/>modified<sp/>files.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Subcommands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>`install-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>a<sp/>Git<sp/>post-commit<sp/>hook<sp/>to<sp/>automatically<sp/>generate<sp/>documentation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>`uninstall-hook`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Remove<sp/>the<sp/>Git<sp/>post-commit<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Option<sp/>Combinations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>Current<sp/>Git<sp/>Diff</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Basic<sp/>usage<sp/>-<sp/>current<sp/>Git<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>a<sp/>Specific<sp/>File</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Single<sp/>file<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Generate<sp/>Documentation<sp/>for<sp/>a<sp/>Folder</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Folder<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/models/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Install<sp/>Hook<sp/>in<sp/>Current<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Install<sp/>Hook<sp/>in<sp/>Specific<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Uninstall<sp/>Hook<sp/>from<sp/>Current<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Uninstall<sp/>Hook<sp/>from<sp/>Specific<sp/>Repository</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Git<sp/>Hook<sp/>Commands</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>provides<sp/>Git<sp/>hook<sp/>commands<sp/>to<sp/>automate<sp/>documentation<sp/>generation<sp/>as<sp/>part<sp/>of<sp/>your<sp/>Git<sp/>workflow.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>How<sp/>Hooks<sp/>Work</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>you<sp/>install<sp/>a<sp/>Git<sp/>hook<sp/>with<sp/>`penify<sp/>docgen<sp/>install-hook`,<sp/>Penify:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Creates<sp/>a<sp/>post-commit<sp/>hook<sp/>script<sp/>in<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Makes<sp/>the<sp/>script<sp/>executable</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Configures<sp/>the<sp/>hook<sp/>to<sp/>run<sp/>`penify<sp/>docgen`<sp/>after<sp/>each<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Hook<sp/>Script<sp/>Content</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>generated<sp/>post-commit<sp/>hook<sp/>contains:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Installation<sp/>Location</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">By<sp/>default,<sp/>hooks<sp/>are<sp/>installed<sp/>in<sp/>the<sp/>current<sp/>Git<sp/>repository.<sp/>You<sp/>can<sp/>specify<sp/>a<sp/>different<sp/>location:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Installation<sp/>Requirements</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>install<sp/>hooks,<sp/>you<sp/>need:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>A<sp/>valid<sp/>Penify<sp/>API<sp/>token<sp/>(login<sp/>first<sp/>with<sp/>`penify<sp/>login`)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Write<sp/>permissions<sp/>to<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Verifying<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>installation,<sp/>you<sp/>can<sp/>verify<sp/>that<sp/>the<sp/>hook<sp/>is<sp/>installed:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>.git/hooks/post-commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Customization</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">You<sp/>can<sp/>customize<sp/>the<sp/>post-commit<sp/>hook<sp/>after<sp/>installation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Modifying<sp/>Hook<sp/>Behavior</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Edit<sp/>the<sp/>`.git/hooks/post-commit`<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Add<sp/>additional<sp/>options<sp/>to<sp/>the<sp/>`penify<sp/>docgen`<sp/>command</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Add<sp/>other<sp/>commands<sp/>to<sp/>run<sp/>after<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Example<sp/>of<sp/>a<sp/>customized<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Additional<sp/>custom<sp/>commands</highlight></codeline>
+<codeline><highlight class="normal">echo<sp/>&quot;Documentation<sp/>generation<sp/>complete!&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Advanced<sp/>Hook<sp/>Scenarios</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Conditional<sp/>Documentation<sp/>Generation**:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>generate<sp/>documentation<sp/>for<sp/>commits<sp/>to<sp/>the<sp/>main<sp/>branch</highlight></codeline>
+<codeline><highlight class="normal">BRANCH=$(git<sp/>rev-parse<sp/>--abbrev-ref<sp/>HEAD)</highlight></codeline>
+<codeline><highlight class="normal">if<sp/>[<sp/>&quot;$BRANCH&quot;<sp/>=<sp/>&quot;main&quot;<sp/>];<sp/>then</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">fi</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Documenting<sp/>Specific<sp/>Files/Folders**:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>document<sp/>Python<sp/>files<sp/>in<sp/>the<sp/>src<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Hook<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Standard<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>remove<sp/>a<sp/>hook<sp/>from<sp/>the<sp/>current<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Specific<sp/>Repository<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">To<sp/>remove<sp/>a<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>repository:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Manual<sp/>Hook<sp/>Removal</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>needed,<sp/>you<sp/>can<sp/>manually<sp/>remove<sp/>the<sp/>hook:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">rm<sp/>.git/hooks/post-commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Verifying<sp/>Uninstallation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Check<sp/>that<sp/>the<sp/>hook<sp/>was<sp/>successfully<sp/>removed:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">ls<sp/>-la<sp/>.git/hooks/post-commit<sp/><sp/>#<sp/>Should<sp/>return<sp/>&quot;No<sp/>such<sp/>file<sp/>or<sp/>directory&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Advanced<sp/>Use<sp/>Cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Continuous<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Run<sp/>documentation<sp/>generation<sp/>in<sp/>CI<sp/>pipelines:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>In<sp/>your<sp/>CI<sp/>script</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_API_TOKEN=your_api_token</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Batch<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>for<sp/>multiple<sp/>repositories:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Bash<sp/>script<sp/>for<sp/>batch<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">for<sp/>repo<sp/>in<sp/>repo1<sp/>repo2<sp/>repo3;<sp/>do</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>cd<sp/>/path/to/$repo</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">done</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Custom<sp/>Git<sp/>Hook<sp/>Integration</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Integrate<sp/>with<sp/>other<sp/>Git<sp/>hooks:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>In<sp/>.git/hooks/pre-push</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Documenting<sp/>Release<sp/>Tags</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>documentation<sp/>when<sp/>creating<sp/>a<sp/>release<sp/>tag:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>everything<sp/>when<sp/>creating<sp/>a<sp/>tag</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>tag<sp/>-a<sp/>v1.0.0</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.<sp/><sp/>#<sp/>Document<sp/>entire<sp/>codebase</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>--amend<sp/>-m<sp/>&quot;Release<sp/>v1.0.0<sp/>with<sp/>updated<sp/>documentation&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Common<sp/>Issues</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>**&quot;Authentication<sp/>required&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Run<sp/>`penify<sp/>login`<sp/>before<sp/>using<sp/>documentation<sp/>features</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>your<sp/>API<sp/>token<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>**&quot;Permission<sp/>denied<sp/>when<sp/>installing<sp/>hook&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>Git<sp/>repository<sp/>permissions</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Try<sp/>running<sp/>with<sp/>sudo<sp/>(if<sp/>appropriate<sp/>for<sp/>your<sp/>environment)</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>the<sp/>`.git/hooks`<sp/>directory<sp/>exists</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>**&quot;Hook<sp/>installed<sp/>but<sp/>not<sp/>running&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>if<sp/>the<sp/>hook<sp/>is<sp/>executable:<sp/>`ls<sp/>-la<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Make<sp/>it<sp/>executable<sp/>if<sp/>needed:<sp/>`chmod<sp/>+x<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>for<sp/>syntax<sp/>errors<sp/>in<sp/>the<sp/>hook<sp/>script</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">4.<sp/>**&quot;File<sp/>or<sp/>directory<sp/>not<sp/>found&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Verify<sp/>the<sp/>path<sp/>provided<sp/>to<sp/>the<sp/>`-l`<sp/>option</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Ensure<sp/>you&apos;re<sp/>running<sp/>the<sp/>command<sp/>from<sp/>the<sp/>correct<sp/>directory</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">5.<sp/>**&quot;Hook<sp/>uninstallation<sp/>failed&quot;**</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Check<sp/>permissions<sp/>on<sp/>the<sp/>`.git/hooks`<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/>-<sp/>Try<sp/>manual<sp/>removal:<sp/>`rm<sp/>.git/hooks/post-commit`</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Debugging</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>detailed<sp/>output<sp/>when<sp/>running<sp/>documentation<sp/>commands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Getting<sp/>Help</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>command-specific<sp/>help:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/doc__commands_8py.xml b/docs/xml/doc__commands_8py.xml
new file mode 100644
index 0000000..88027b7
--- /dev/null
+++ b/docs/xml/doc__commands_8py.xml
@@ -0,0 +1,152 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="doc__commands_8py" kind="file" language="Python">
+    <compoundname>doc_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1doc__commands">penify_hook::commands::doc_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1doc__commands" refkind="compound"><highlight class="normal"></highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(api_url,<sp/>token,<sp/>location=None):</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>documentation<sp/>based<sp/>on<sp/>the<sp/>given<sp/>parameters.</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="11"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>initializes<sp/>an<sp/>API<sp/>client<sp/>using<sp/>the<sp/>provided<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>token.</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>It<sp/>then<sp/>generates<sp/>documentation<sp/>by<sp/>analyzing<sp/>the<sp/>specified<sp/>location,<sp/>which<sp/>can</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>be<sp/>a<sp/>folder,<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>working<sp/>directory<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>provided.<sp/>The<sp/>function<sp/>handles<sp/>different<sp/>types<sp/>of<sp/>analysis<sp/>based<sp/>on<sp/>the<sp/>input</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>location<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>reports<sp/>any<sp/>errors<sp/>encountered<sp/>during<sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>to<sp/>connect<sp/>to<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(str?):<sp/>The<sp/>path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>folder<sp/>to<sp/>analyze.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>provided,</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>current<sp/>working<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>used.</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>t1<sp/>=<sp/>time.time()</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Time<sp/>taken<sp/>to<sp/>laod<sp/>APIClinet:<sp/>{time.time()<sp/>-<sp/>t1:.2f}<sp/>seconds&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generates<sp/>documentation<sp/>based<sp/>on<sp/>the<sp/>given<sp/>parameters.</highlight></codeline>
+<codeline lineno="27"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="28"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>initializes<sp/>an<sp/>API<sp/>client<sp/>using<sp/>the<sp/>provided<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>token.<sp/>It<sp/>then<sp/>generates<sp/>documentation<sp/>by<sp/>analyzing<sp/>the<sp/>specified</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>location,<sp/>which<sp/>can<sp/>be<sp/>a<sp/>folder,<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>the<sp/>current<sp/>working</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>directory<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided.<sp/>The<sp/>function<sp/>handles<sp/>different</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>types<sp/>of<sp/>analysis<sp/>based<sp/>on<sp/>the<sp/>input<sp/>location<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>reports<sp/>any<sp/>errors</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>encountered<sp/>during<sp/>the<sp/>process.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>to<sp/>connect<sp/>to<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>accessing<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>location<sp/>(str?):<sp/>The<sp/>path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>folder<sp/>to<sp/>analyze.</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>provided,<sp/>the<sp/>current<sp/>working<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>used.</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="41"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>api_client<sp/>=<sp/>APIClient(api_url,<sp/>token)</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>location<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_folder_path<sp/>=<sp/>os.getcwd()</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..git_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>GitDocGenHook</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>GitDocGenHook(current_folder_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>if<sp/>location<sp/>is<sp/>a<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>len(location.split(</highlight><highlight class="stringliteral">&apos;.&apos;</highlight><highlight class="normal">))<sp/>&gt;<sp/>1:</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..file_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FileAnalyzerGenHook</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>FileAnalyzerGenHook(location,<sp/>api_client)</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>..folder_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FolderAnalyzerGenHook</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/>FolderAnalyzerGenHook(location,<sp/>api_client)</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Define<sp/>the<sp/>docgen<sp/>description<sp/>text</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948" refkind="member"><highlight class="normal">docgen_description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>code<sp/>documentation<sp/>using<sp/>Penify.</highlight></codeline>
+<codeline lineno="74"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="75"><highlight class="stringliteral">This<sp/>command<sp/>requires<sp/>you<sp/>to<sp/>be<sp/>logged<sp/>in<sp/>to<sp/>your<sp/>Penify<sp/>account.</highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral">You<sp/>can<sp/>generate<sp/>documentation<sp/>for:</highlight></codeline>
+<codeline lineno="77"><highlight class="stringliteral">-<sp/>Current<sp/>Git<sp/>diff<sp/>(default)</highlight></codeline>
+<codeline lineno="78"><highlight class="stringliteral">-<sp/>Specific<sp/>file</highlight></codeline>
+<codeline lineno="79"><highlight class="stringliteral">-<sp/>Specific<sp/>folder</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="81"><highlight class="normal"></highlight></codeline>
+<codeline lineno="82" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>We<sp/>don&apos;t<sp/>need<sp/>to<sp/>create<sp/>a<sp/>new<sp/>docgen_parser<sp/>since<sp/>it&apos;s<sp/>passed<sp/>as<sp/>a<sp/>parameter</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Configure<sp/>a<sp/>parser<sp/>for<sp/>generating<sp/>documentation<sp/>using<sp/>Git<sp/>commands.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_parser_description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="87"><highlight class="stringliteral">It<sp/>generates<sp/>Documentation<sp/>for<sp/>the<sp/>Git<sp/>diff,<sp/>file<sp/>or<sp/>folder.</highlight></codeline>
+<codeline lineno="88"><highlight class="stringliteral">1.<sp/>By<sp/>default,<sp/>it<sp/>will<sp/>git<sp/>diff<sp/>documentation<sp/>-<sp/>visit<sp/>https://penify.wiki/dcdc<sp/>for<sp/>more<sp/>details.</highlight></codeline>
+<codeline lineno="89"><highlight class="stringliteral">2.<sp/>If<sp/>file<sp/>is<sp/>provided,<sp/>it<sp/>will<sp/>generate<sp/>documentation<sp/>for<sp/>that<sp/>file<sp/>-<sp/>visit<sp/>https://penify.wiki/dfdc</highlight></codeline>
+<codeline lineno="90"><highlight class="stringliteral">3.<sp/>If<sp/>folder<sp/>is<sp/>provided,<sp/>it<sp/>will<sp/>generate<sp/>documentation<sp/>for<sp/>that<sp/>folder<sp/>-<sp/>visit<sp/>https://penify.wiki/drdc</highlight></codeline>
+<codeline lineno="91"><highlight class="stringliteral">4.<sp/>Commit<sp/>Hooks<sp/>will<sp/>automatically<sp/>generate<sp/>documentation<sp/>for<sp/>the<sp/>Git<sp/>diff<sp/>on<sp/>commit<sp/>-<sp/>https://penify.wiki/dpchc</highlight></codeline>
+<codeline lineno="92"><highlight class="stringliteral">5.<sp/>You<sp/>need<sp/>to<sp/>be<sp/>logged<sp/>in<sp/>to<sp/>your<sp/>Penify<sp/>account<sp/>to<sp/>use<sp/>these<sp/>commands.</highlight></codeline>
+<codeline lineno="93"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.description<sp/>=<sp/>docgen_parser_description</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.formatter_class<sp/>=<sp/>argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_subparsers<sp/>=<sp/>parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;docgen_subcommand&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;docgen_subcommand&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Docgen<sp/>main<sp/>options<sp/>(for<sp/>direct<sp/>documentation<sp/>generation)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;[Optional]<sp/>Path<sp/>to<sp/>the<sp/>folder<sp/>or<sp/>file<sp/>to<sp/>Generate<sp/>Documentation.<sp/>By<sp/>default<sp/>it<sp/>will<sp/>pick<sp/>the<sp/>root<sp/>directory.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Subcommand:<sp/>install-hook<sp/>(as<sp/>part<sp/>of<sp/>docgen)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>install_hook_parser<sp/>=<sp/>docgen_subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;install-hook&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Install<sp/>the<sp/>Git<sp/>post-commit<sp/>hook.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/>install_hook_parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>help=</highlight><highlight class="stringliteral">&quot;Location<sp/>in<sp/>which<sp/>to<sp/>install<sp/>the<sp/>Git<sp/>hook.<sp/>Defaults<sp/>to<sp/>current<sp/>directory.&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default=os.getcwd())</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Subcommand:<sp/>uninstall-hook<sp/>(as<sp/>part<sp/>of<sp/>docgen)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall_hook_parser<sp/>=<sp/>docgen_subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;uninstall-hook&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Uninstall<sp/>the<sp/>Git<sp/>post-commit<sp/>hook.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall_hook_parser.add_argument(</highlight><highlight class="stringliteral">&quot;-l&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--location&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>help=</highlight><highlight class="stringliteral">&quot;Location<sp/>from<sp/>which<sp/>to<sp/>uninstall<sp/>the<sp/>Git<sp/>hook.<sp/>Defaults<sp/>to<sp/>current<sp/>directory.&quot;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default=os.getcwd())</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"></highlight></codeline>
+<codeline lineno="114" refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args):</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>docgen<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Handle<sp/>document<sp/>generation<sp/>and<sp/>hook<sp/>management<sp/>based<sp/>on<sp/>subcommands.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_token</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands" kindref="compound">penify_hook.commands.doc_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>generate_doc</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands" kindref="compound">penify_hook.commands.hook_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>install_git_hook,<sp/>uninstall_git_hook</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/>token<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>token:</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(</highlight><highlight class="stringliteral">&quot;Error:<sp/>Unable<sp/>to<sp/>authenticate.<sp/>Please<sp/>run<sp/>&apos;penify<sp/>login&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"></highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;install-hook&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" kindref="member">install_git_hook</ref>(args.location,<sp/>token)</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;uninstall-hook&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" kindref="member">uninstall_git_hook</ref>(args.location)</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:<sp/><sp/></highlight><highlight class="comment">#<sp/>Direct<sp/>documentation<sp/>generation</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(API_URL,<sp/>token,<sp/>args.location)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/doxyfile.xsd b/docs/xml/doxyfile.xsd
new file mode 100644
index 0000000..fbfc2c1
--- /dev/null
+++ b/docs/xml/doxyfile.xsd
@@ -0,0 +1,45 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxyfile" type="DoxygenFileType"/>
+
+  <xsd:complexType name="DoxygenFileType">
+    <xsd:sequence>
+      <xsd:element name="option" type="OptionType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="version" type="xsd:string" use="required"/>
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="OptionType">
+    <xsd:sequence>
+      <xsd:element name="value" type="valueType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="id" type="xsd:string" use="required"/>
+    <xsd:attribute name="default" type="defaultType" use="required"/>
+    <xsd:attribute name="type" type="typeType" use="required"/>
+  </xsd:complexType>
+
+  <xsd:simpleType name="valueType">
+    <xsd:restriction base="xsd:string">
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="defaultType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="yes"/>
+      <xsd:enumeration value="no"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="typeType">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="int"/>
+      <xsd:enumeration value="bool"/>
+      <xsd:enumeration value="string"/>
+      <xsd:enumeration value="stringlist"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
diff --git a/docs/xml/example-workflows_8md.xml b/docs/xml/example-workflows_8md.xml
new file mode 100644
index 0000000..24722e9
--- /dev/null
+++ b/docs/xml/example-workflows_8md.xml
@@ -0,0 +1,156 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="example-workflows_8md" kind="file" language="Markdown">
+    <compoundname>example-workflows.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Example<sp/>Workflows</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">This<sp/>document<sp/>demonstrates<sp/>how<sp/>to<sp/>use<sp/>Penify<sp/>CLI<sp/>in<sp/>real-world<sp/>development<sp/>workflows<sp/>to<sp/>improve<sp/>your<sp/>productivity.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>1:<sp/>Efficient<sp/>Git<sp/>Commits<sp/>with<sp/>AI</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">First,<sp/>configure<sp/>your<sp/>local<sp/>LLM<sp/>for<sp/>offline<sp/>operation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Configure<sp/>your<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Daily<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Make<sp/>your<sp/>code<sp/>changes<sp/>as<sp/>usual</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>When<sp/>ready<sp/>to<sp/>commit,<sp/>use<sp/>Penify<sp/>to<sp/>generate<sp/>a<sp/>smart<sp/>commit<sp/>message:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">3.<sp/>Review<sp/>and<sp/>confirm<sp/>the<sp/>generated<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Git<sp/>commit<sp/>and<sp/>push<sp/>as<sp/>usual</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Consistent<sp/>and<sp/>descriptive<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Automatic<sp/>inclusion<sp/>of<sp/>relevant<sp/>JIRA<sp/>ticket<sp/>information</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Time<sp/>saved<sp/>from<sp/>writing<sp/>detailed<sp/>commit<sp/>messages</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>2:<sp/>Documentation<sp/>Generation<sp/>Pipeline</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Login<sp/>to<sp/>Penify<sp/>to<sp/>access<sp/>advanced<sp/>documentation<sp/>features:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Install<sp/>the<sp/>Git<sp/>hook<sp/>for<sp/>automatic<sp/>documentation<sp/>generation:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Daily<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Make<sp/>your<sp/>code<sp/>changes<sp/>as<sp/>usual</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Commit<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Documentation<sp/>is<sp/>automatically<sp/>generated<sp/>for<sp/>changed<sp/>files</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>Review<sp/>the<sp/>generated<sp/>documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Manual<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>specific<sp/>files<sp/>or<sp/>folders:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/authentication</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Always<sp/>up-to-date<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Consistent<sp/>documentation<sp/>style</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Time<sp/>saved<sp/>from<sp/>writing<sp/>detailed<sp/>documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>3:<sp/>Code<sp/>Review<sp/>Enhancement</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Setup</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Ensure<sp/>you&apos;re<sp/>logged<sp/>into<sp/>Penify:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Workflow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Before<sp/>submitting<sp/>a<sp/>PR,<sp/>generate<sp/>documentation<sp/>for<sp/>changed<sp/>files:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">2.<sp/>Include<sp/>the<sp/>generated<sp/>documentation<sp/>in<sp/>your<sp/>PR</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Reviewers<sp/>can<sp/>better<sp/>understand<sp/>your<sp/>changes<sp/>with<sp/>the<sp/>AI-generated<sp/>explanations</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Improved<sp/>PR<sp/>quality</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Faster<sp/>code<sp/>reviews</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Better<sp/>team<sp/>understanding<sp/>of<sp/>code<sp/>changes</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>4:<sp/>Onboarding<sp/>New<sp/>Team<sp/>Members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>For<sp/>Team<sp/>Leads</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>comprehensive<sp/>documentation<sp/>for<sp/>the<sp/>entire<sp/>codebase:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>For<sp/>New<sp/>Team<sp/>Members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Generate<sp/>focused<sp/>documentation<sp/>for<sp/>components<sp/>you&apos;re<sp/>working<sp/>on:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/my-feature</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Faster<sp/>onboarding</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Better<sp/>understanding<sp/>of<sp/>code<sp/>structure</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Reduced<sp/>questions<sp/>to<sp/>senior<sp/>team<sp/>members</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Workflow<sp/>5:<sp/>Legacy<sp/>Code<sp/>Understanding</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">When<sp/>working<sp/>with<sp/>unfamiliar<sp/>legacy<sp/>code:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>a<sp/>specific<sp/>complex<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/complex_module.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>an<sp/>entire<sp/>legacy<sp/>component</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/old_component</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Benefits</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Quickly<sp/>understand<sp/>complex<sp/>legacy<sp/>systems</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Reduce<sp/>time<sp/>spent<sp/>deciphering<sp/>undocumented<sp/>code</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Make<sp/>safer<sp/>changes<sp/>to<sp/>legacy<sp/>systems</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/file__analyzer_8py.xml b/docs/xml/file__analyzer_8py.xml
new file mode 100644
index 0000000..312fc34
--- /dev/null
+++ b/docs/xml/file__analyzer_8py.xml
@@ -0,0 +1,170 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="file__analyzer_8py" kind="file" language="Python">
+    <compoundname>file_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public">penify_hook::file_analyzer::FileAnalyzerGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1file__analyzer">penify_hook::file_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1file__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.ui_utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>format_highlight,<sp/>print_info,<sp/>print_success,<sp/>print_warning,<sp/>print_error,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>print_status,<sp/>create_stage_progress_bar,</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>update_stage,<sp/>format_file_path</highlight></codeline>
+<codeline lineno="15"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>logger</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kindref="compound">FileAnalyzerGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="21" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" kindref="member">__init__</ref>(self,<sp/>file_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="22" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref><sp/>=<sp/>file_path</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" kindref="member">__init__</ref>(file_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"></highlight></codeline>
+<codeline lineno="27" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" kindref="member">process_file</ref>(self,<sp/>file_path,<sp/>pbar,<sp/>new_param:<sp/>str<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Processes<sp/>a<sp/>file<sp/>by<sp/>validating<sp/>its<sp/>extension,<sp/>reading<sp/>content,</highlight></codeline>
+<codeline lineno="29"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generating<sp/>documentation,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>writing<sp/>changes<sp/>back<sp/>to<sp/>the<sp/>file.<sp/><sp/>The<sp/>function</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>performs<sp/>several<sp/>stages<sp/>of<sp/>processing:<sp/>1.<sp/>Validates<sp/>the<sp/>file</highlight><highlight class="stringliteral">&apos;s<sp/>extension<sp/>to</highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ensure<sp/>it<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>supported.<sp/>2.<sp/>Reads<sp/>the<sp/>content<sp/>of<sp/>the<sp/>file.<sp/>3.<sp/>Sends<sp/>the<sp/>file</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>documentation<sp/>generation.<sp/>4.<sp/>Writes<sp/>the<sp/>generated<sp/>documentation</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>back<sp/>to<sp/>the<sp/>file<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>there<sp/>are<sp/>changes.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>path<sp/>of<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar<sp/>(tqdm.tqdm):<sp/>A<sp/>progress<sp/>bar<sp/>object<sp/>to<sp/>update<sp/>the<sp/>status<sp/>of<sp/>processing<sp/>stages.</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>new_param<sp/>(str?):<sp/>An<sp/>additional<sp/>parameter<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>future<sp/>use.<sp/>Defaults<sp/>to<sp/>an<sp/>empty<sp/>string.</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="39"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_abs_path<sp/>=<sp/>os.path.join(os.getcwd(),<sp/>file_path)</highlight></codeline>
+<codeline lineno="40"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>os.path.splitext(file_path)[1].lower()</highlight></codeline>
+<codeline lineno="41"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>1:<sp/>Validating<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Validating&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>file_extension:</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>Empty<sp/>extension<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>&apos;{self.relative_file_path}&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>file_extension[1:]<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>the<sp/>leading<sp/>dot</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>file_extension<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref>:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>File<sp/>type<sp/>&apos;{file_extension}&apos;<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>&apos;{self.relative_file_path}&apos;.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>2:<sp/>Reading<sp/>content<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Reading<sp/>content&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>file.read()</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>reading<sp/>file<sp/>{file_path}:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>[i<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>i<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>range(len(content.splitlines()))]</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>3:<sp/>Documenting<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Documenting&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.send_file_for_docstring_generation(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kindref="member">relative_file_path</ref>,<sp/>content,<sp/>modified_lines,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/>==<sp/>content:</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>needed<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>progress<sp/>bar<sp/>to<sp/>indicate<sp/>we&apos;re<sp/>moving<sp/>to<sp/>next<sp/>stage</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>---<sp/>STAGE<sp/>4:<sp/>Writing<sp/>changes<sp/>---</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Writing<sp/>changes&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.write(response)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>file<sp/>{file_path}<sp/>with<sp/>generated<sp/>documentation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mark<sp/>final<sp/>stage<sp/>as<sp/>complete</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>writing<sp/>file<sp/>{file_path}:<sp/>{str(e)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="101" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" kindref="member">print_processing</ref>(self,<sp/>file_path):</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Prints<sp/>a<sp/>message<sp/>indicating<sp/>that<sp/>a<sp/>file<sp/>is<sp/>being<sp/>processed.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>formatted_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path)</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;\n{format_highlight(f&apos;Processing<sp/>file:<sp/>{formatted_path}&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"></highlight></codeline>
+<codeline lineno="106" refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>a<sp/>progress<sp/>bar<sp/>with<sp/>appropriate<sp/>stages</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Runs<sp/>the<sp/>documentation<sp/>process<sp/>with<sp/>a<sp/>progress<sp/>bar.</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>orchestrates<sp/>the<sp/>documentation<sp/>process<sp/>by<sp/>creating<sp/>a<sp/>progress<sp/>bar,</highlight></codeline>
+<codeline lineno="112"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>processing<sp/>the<sp/>file,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handling<sp/>exceptions<sp/>to<sp/>ensure<sp/>the<sp/>progress<sp/>bar</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>completes<sp/>properly.<sp/>It<sp/>updates<sp/>the<sp/>progress<sp/>bar<sp/>through<sp/>various<sp/>stages<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>provides<sp/>feedback<sp/>based<sp/>on<sp/>the<sp/>result<sp/>of<sp/>the<sp/>file<sp/>processing.</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>stages<sp/>=<sp/>[&quot;Validating&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Reading<sp/>content&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Documenting&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Writing<sp/>changes&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Completed&quot;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar,<sp/>_<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" kindref="member">create_stage_progress_bar</ref>(stages,<sp/>f</highlight><highlight class="stringliteral">&quot;Starting<sp/>documenting&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Print<sp/>a<sp/>clear<sp/>indication<sp/>of<sp/>which<sp/>file<sp/>is<sp/>being<sp/>processed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>self.print_processing(self.file_path)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Process<sp/>the<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" kindref="member">process_file</ref>(self.<ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kindref="member">file_path</ref>,<sp/>pbar)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>all<sp/>stages<sp/>are<sp/>completed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining_steps<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining_steps)</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Display<sp/>appropriate<sp/>message<sp/>based<sp/>on<sp/>result</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>remaining<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining)</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Complete&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.clear()</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.close()</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remaining<sp/>=<sp/>len(stages)<sp/>-<sp/>pbar.n</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>remaining<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(remaining)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/></highlight><highlight class="stringliteral">&quot;Complete&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.clear()</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.close()</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">,<sp/>e)</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Ensure<sp/>progress<sp/>bar<sp/>completes<sp/>even<sp/>on<sp/>error</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;\n✓<sp/>Documentation<sp/>updated<sp/>for<sp/>{self.relative_file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(f</highlight><highlight class="stringliteral">&quot;\n✓<sp/>No<sp/>changes<sp/>needed<sp/>for<sp/>{self.relative_file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/folder__analyzer_8py.xml b/docs/xml/folder__analyzer_8py.xml
new file mode 100644
index 0000000..8aab81c
--- /dev/null
+++ b/docs/xml/folder__analyzer_8py.xml
@@ -0,0 +1,67 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="folder__analyzer_8py" kind="file" language="Python">
+    <compoundname>folder_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public">penify_hook::folder_analyzer::FolderAnalyzerGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1folder__analyzer">penify_hook::folder_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1folder__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.file_analyzer<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>FileAnalyzerGenHook</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" kindref="compound">FolderAnalyzerGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" kindref="member">__init__</ref>(self,<sp/>dir_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="11" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" kindref="member">dir_path</ref><sp/>=<sp/>dir_path</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" kindref="member">__init__</ref>(dir_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" kindref="member">list_all_files_in_dir</ref>(self,<sp/>dir_path:<sp/>str):</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;List<sp/>all<sp/>non-hidden<sp/>files<sp/>in<sp/>a<sp/>directory<sp/>and<sp/>its<sp/>subdirectories.</highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="18"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>recursively<sp/>traverses<sp/>the<sp/>specified<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subdirectories,<sp/>collecting<sp/>paths<sp/>of<sp/>all<sp/>non-hidden<sp/>files.<sp/>It<sp/>filters<sp/>out<sp/>hidden</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>directories<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>files<sp/>(those<sp/>starting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>dot)<sp/>to<sp/>ensure<sp/>only<sp/>visible<sp/>files</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>are<sp/>returned.</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dir_path<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>directory<sp/>whose<sp/>files<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>subdirectory<sp/>files<sp/>need<sp/>to<sp/>be<sp/>listed.</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="27"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>dirpath,<sp/>dirnames,<sp/>filenames<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>os.walk(dir_path):</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dirnames[:]<sp/>=<sp/>[d<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>d<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>dirnames<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>d.startswith(</highlight><highlight class="stringliteral">&quot;.&quot;</highlight><highlight class="normal">)]</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>filename<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>filenames:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Construct<sp/>the<sp/>full<sp/>file<sp/>path</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>full_path<sp/>=<sp/>os.path.join(dirpath,<sp/>filename)</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files.append(full_path)</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>files</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"></highlight></codeline>
+<codeline lineno="35" refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook<sp/>and<sp/>process<sp/>files<sp/>with<sp/>a<sp/>progress<sp/>bar.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_list<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" kindref="member">list_all_files_in_dir</ref>(self.<ref refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" kindref="member">dir_path</ref>)</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total_files<sp/>=<sp/>len(file_list)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Processing<sp/>{total_files}<sp/>files<sp/>in<sp/>folder<sp/>[{self.dir_path}]&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>tqdm(total=total_files,<sp/>desc=</highlight><highlight class="stringliteral">&quot;Processing<sp/>files&quot;</highlight><highlight class="normal">,<sp/>unit=</highlight><highlight class="stringliteral">&quot;file&quot;</highlight><highlight class="normal">,<sp/>ncols=80,<sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>pbar:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file_path<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>file_list:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer<sp/>=<sp/><ref refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kindref="compound">FileAnalyzerGenHook</ref>(file_path,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>)</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>analyzer.run()</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file_error:</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>processing<sp/>file<sp/>[{file_path}]:<sp/>{file_error}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)<sp/><sp/></highlight><highlight class="comment">#<sp/>Even<sp/>if<sp/>there<sp/>is<sp/>an<sp/>error,<sp/>move<sp/>the<sp/>progress<sp/>bar<sp/>forward</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;File<sp/>[{self.dir_path}]<sp/>was<sp/>not<sp/>processed<sp/>due<sp/>to<sp/>error:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/git__analyzer_8py.xml b/docs/xml/git__analyzer_8py.xml
new file mode 100644
index 0000000..fe2453e
--- /dev/null
+++ b/docs/xml/git__analyzer_8py.xml
@@ -0,0 +1,193 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="git__analyzer_8py" kind="file" language="Python">
+    <compoundname>git_analyzer.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public">penify_hook::git_analyzer::GitDocGenHook</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1git__analyzer">penify_hook::git_analyzer</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1git__analyzer" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1base__analyzer" kindref="compound">penify_hook.base_analyzer</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>BaseAnalyzer</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils" kindref="compound">penify_hook.utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>get_repo_details,<sp/>recursive_search_git_folder</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.api_client<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>APIClient</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.ui_utils<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>print_info,<sp/>print_success,<sp/>print_warning,<sp/>print_error,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>print_processing,<sp/>print_status,<sp/>create_progress_bar,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>format_file_path</highlight></codeline>
+<codeline lineno="14"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>logger</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight></codeline>
+<codeline lineno="19" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" kindref="compound">GitDocGenHook</ref>(<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kindref="compound">BaseAnalyzer</ref>):</highlight></codeline>
+<codeline lineno="20" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" kindref="member">__init__</ref>(self,<sp/>repo_path:<sp/>str,<sp/>api_client:<sp/>APIClient):</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>super().<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" kindref="member">__init__</ref>(repo_path,<sp/>api_client)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"></highlight></codeline>
+<codeline lineno="23" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" kindref="member">get_modified_files_in_last_commit</ref>(self):</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Get<sp/>the<sp/>list<sp/>of<sp/>files<sp/>modified<sp/>in<sp/>the<sp/>last<sp/>commit.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>last_commit<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.head.commit</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>diff<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>last_commit.diff(</highlight><highlight class="stringliteral">&apos;HEAD~1&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>diff.a_path<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>modified_files:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files.append(diff.a_path)</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>modified_files</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" kindref="member">get_modified_lines</ref>(self,<sp/>diff_text):</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extract<sp/>modified<sp/>line<sp/>numbers<sp/>from<sp/>a<sp/>diff<sp/>text.</highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>a<sp/>diff<sp/>text<sp/>to<sp/>identify<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>extract<sp/>the<sp/>line<sp/>numbers</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>that<sp/>have<sp/>been<sp/>modified.<sp/>It<sp/>distinguishes<sp/>between<sp/>added<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>deleted<sp/>lines<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>keeps<sp/>track<sp/>of<sp/>the<sp/>current<sp/>line<sp/>number<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>it<sp/>parses<sp/>through<sp/>the<sp/>diff.<sp/>The</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>function<sp/>handles<sp/>hunk<sp/>headers<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>ensures<sp/>that<sp/>any<sp/>deletions<sp/>at<sp/>the<sp/>end<sp/>of<sp/>the</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file<sp/>are<sp/>also<sp/>captured.</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff_text<sp/>(str):<sp/>A<sp/>string<sp/>containing<sp/>the<sp/>diff<sp/>text<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="44"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="45"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>=<sp/>0</highlight></codeline>
+<codeline lineno="46"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>diff_text.splitlines():</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;@@&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>the<sp/>hunk<sp/>header</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_,<sp/>old,<sp/>new,<sp/>_<sp/>=<sp/>line.split(</highlight><highlight class="stringliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">,<sp/>3)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>=<sp/>int(new.split(</highlight><highlight class="stringliteral">&apos;,&apos;</highlight><highlight class="normal">)[0].strip(</highlight><highlight class="stringliteral">&apos;+&apos;</highlight><highlight class="normal">))</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;-&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>a<sp/>deleted<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/>current_line</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>line.startswith(</highlight><highlight class="stringliteral">&apos;+&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>an<sp/>added<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(current_line)</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>+=<sp/>1</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>This<sp/>is<sp/>an<sp/>unchanged<sp/>line</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_line<sp/>+=<sp/>1</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>deletion_start<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Handle<sp/>case<sp/>where<sp/>deletion<sp/>is<sp/>at<sp/>the<sp/>end<sp/>of<sp/>the<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>deletion_start<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines.append(deletion_start)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>sorted(set(modified_lines))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates<sp/>and<sp/>sort</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" kindref="member">process_file</ref>(self,<sp/>file_path):</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Processes<sp/>a<sp/>file<sp/>by<sp/>checking<sp/>its<sp/>type,<sp/>reading<sp/>its<sp/>content,<sp/>and<sp/>sending<sp/>it<sp/>to</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>API.</highlight></codeline>
+<codeline lineno="81"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="82"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>constructs<sp/>the<sp/>absolute<sp/>path<sp/>of<sp/>the<sp/>specified<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>file<sp/>has<sp/>a<sp/>valid<sp/>extension.<sp/>If<sp/>the<sp/>file<sp/>type<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>supported,<sp/>it<sp/>reads<sp/>the</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>of<sp/>the<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>retrieves<sp/>the<sp/>differences<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repository.<sp/>If<sp/>changes<sp/>are<sp/>detected,<sp/>it<sp/>sends<sp/>the<sp/>file<sp/>content<sp/>along<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified<sp/>lines<sp/>to<sp/>an<sp/>API<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>further<sp/>processing.<sp/>If<sp/>the<sp/>API<sp/>response<sp/>indicates</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>no<sp/>changes,<sp/>the<sp/>original<sp/>file<sp/>will<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>be<sp/>overwritten.</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_path<sp/>(str):<sp/>The<sp/>relative<sp/>path<sp/>to<sp/>the<sp/>file<sp/>to<sp/>be<sp/>processed.</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="92"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_abs_path<sp/>=<sp/>os.path.join(self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kindref="member">repo_path</ref>,<sp/>file_path)</highlight></codeline>
+<codeline lineno="93"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>os.path.splitext(file_path)[1].lower()</highlight></codeline>
+<codeline lineno="94"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>file_extension:</highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;File<sp/>{file_path}<sp/>has<sp/>no<sp/>extension.<sp/>Skipping.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file_extension<sp/>=<sp/>file_extension[1:]<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>the<sp/>leading<sp/>dot</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>file_extension<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kindref="member">supported_file_types</ref>:</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;File<sp/>type<sp/>{file_extension}<sp/>is<sp/>not<sp/>supported.<sp/>Skipping<sp/>{file_path}.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="104"><highlight class="normal"></highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>file.read()</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>diff<sp/>of<sp/>the<sp/>file<sp/>in<sp/>the<sp/>last<sp/>commit</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>last_commit<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.head.commit</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prev_commit<sp/>=<sp/>last_commit.parents[0]<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>last_commit.parents<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>last_commit</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Use<sp/>git<sp/>command<sp/>to<sp/>get<sp/>the<sp/>diff</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff_text<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.diff(prev_commit.hexsha,<sp/>last_commit.hexsha,<sp/></highlight><highlight class="stringliteral">&apos;--&apos;</highlight><highlight class="normal">,<sp/>file_path)</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"></highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>diff_text:</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>detected<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="118"><highlight class="normal"></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_lines<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" kindref="member">get_modified_lines</ref>(diff_text)</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Send<sp/>data<sp/>to<sp/>API</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kindref="member">api_client</ref>.send_file_for_docstring_generation(file_path,<sp/>content,<sp/>modified_lines,<sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kindref="member">repo_details</ref>)</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>response<sp/>==<sp/>content:</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>detected<sp/>for<sp/>{file_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>the<sp/>response<sp/>is<sp/>successful,<sp/>replace<sp/>the<sp/>file<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>open(file_abs_path,<sp/></highlight><highlight class="stringliteral">&apos;w&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file:</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.write(response)</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>file<sp/>{file_path}<sp/>with<sp/>generated<sp/>documentation&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"></highlight></codeline>
+<codeline lineno="134" refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" kindref="member">run</ref>(self):</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Run<sp/>the<sp/>post-commit<sp/>hook.</highlight></codeline>
+<codeline lineno="136"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="137"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>retrieves<sp/>the<sp/>list<sp/>of<sp/>modified<sp/>files<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>last<sp/>commit<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>processes<sp/>each<sp/>file.<sp/>It<sp/>stages<sp/>any<sp/>files<sp/>that<sp/>have<sp/>been<sp/>modified<sp/>during</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>processing<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>creates<sp/>an<sp/>auto-commit<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>changes<sp/>were<sp/>made.<sp/>A<sp/>progress<sp/>bar<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>displayed<sp/>to<sp/>indicate<sp/>the<sp/>processing<sp/>status<sp/>of<sp/>each<sp/>file.<sp/>The<sp/>method<sp/>handles</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>any<sp/>exceptions<sp/>that<sp/>occur<sp/>during<sp/>file<sp/>processing,<sp/>printing<sp/>an<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>each<sp/>file<sp/>that<sp/>fails<sp/>to<sp/>process.<sp/>If<sp/>any<sp/>modifications<sp/>are<sp/>made<sp/>to<sp/>the<sp/>files,<sp/>an</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>auto-commit<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>created<sp/>to<sp/>save<sp/>those<sp/>changes.</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="145"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(&quot;Starting<sp/>doc_gen_hook<sp/>processing&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Starting<sp/>doc_gen_hook<sp/>processing&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modified_files<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" kindref="member">get_modified_files_in_last_commit</ref>()</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changes_made<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total_files<sp/>=<sp/>len(modified_files)</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"></highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" kindref="member">create_progress_bar</ref>(total_files,<sp/></highlight><highlight class="stringliteral">&quot;Processing<sp/>files&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;file&quot;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>pbar:</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>modified_files:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" kindref="member">print_processing</ref>(file)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Processing<sp/>file:<sp/>{file}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" kindref="member">process_file</ref>(file):</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Stage<sp/>the<sp/>modified<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kindref="member">repo</ref>.git.add(file)</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>changes_made<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Documentation<sp/>updated&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;No<sp/>changes<sp/>needed&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>file_error:</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error_msg<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;Error<sp/>processing<sp/>file<sp/>[{file}]:<sp/>{file_error}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(error_msg)</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(</highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">,<sp/>error_msg)</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pbar.update(1)<sp/><sp/></highlight><highlight class="comment">#<sp/>Update<sp/>the<sp/>progress<sp/>bar</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="169"><highlight class="normal"></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>any<sp/>file<sp/>was<sp/>modified,<sp/>create<sp/>a<sp/>new<sp/>commit</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>changes_made:</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>self.repo.git.commit(&apos;-m&apos;,<sp/>&apos;Auto-commit:<sp/>Updated<sp/>files<sp/>after<sp/>doc_gen_hook<sp/>processing.&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(</highlight><highlight class="stringliteral">&quot;Auto-commit<sp/>created<sp/>with<sp/>changes.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(</highlight><highlight class="stringliteral">&quot;\n✓<sp/>Auto-commit<sp/>created<sp/>with<sp/>changes&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.info(</highlight><highlight class="stringliteral">&quot;doc_gen_hook<sp/>complete.<sp/>No<sp/>changes<sp/>made.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;\n✓<sp/>doc_gen_hook<sp/>complete.<sp/>No<sp/>changes<sp/>made.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/hook__commands_8py.xml b/docs/xml/hook__commands_8py.xml
new file mode 100644
index 0000000..b48451a
--- /dev/null
+++ b/docs/xml/hook__commands_8py.xml
@@ -0,0 +1,52 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="hook__commands_8py" kind="file" language="Python">
+    <compoundname>hook_commands.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1hook__commands">penify_hook::commands::hook_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands_1_1hook__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight></codeline>
+<codeline lineno="4" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1" refkind="member"><highlight class="normal">HOOK_FILENAME<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;post-commit&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="5" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7" refkind="member"><highlight class="normal">HOOK_TEMPLATE<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;#!/bin/sh</highlight></codeline>
+<codeline lineno="6"><highlight class="stringliteral">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline lineno="7"><highlight class="stringliteral">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline lineno="8"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="9"><highlight class="stringliteral">penify<sp/>docgen<sp/>-gf<sp/>{git_folder_path}<sp/>-t<sp/>{token}</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" kindref="member">install_git_hook</ref>(location,<sp/>token):</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Install<sp/>a<sp/>post-commit<sp/>Git<sp/>hook<sp/>that<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>hooks_dir<sp/>=<sp/>Path(location)<sp/>/<sp/></highlight><highlight class="stringliteral">&quot;.git/hooks&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path<sp/>=<sp/>hooks_dir<sp/>/<sp/>HOOK_FILENAME</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>hooks_dir.exists():</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error:<sp/>The<sp/>hooks<sp/>directory<sp/>{hooks_dir}<sp/>does<sp/>not<sp/>exist.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(1)</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_content<sp/>=<sp/>HOOK_TEMPLATE.format(token=token,<sp/>git_folder_path=location)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path.write_text(hook_content)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path.chmod(0o755)<sp/><sp/></highlight><highlight class="comment">#<sp/>Make<sp/>the<sp/>hook<sp/>script<sp/>executable</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Post-commit<sp/>hook<sp/>installed<sp/>in<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Documentation<sp/>will<sp/>now<sp/>be<sp/>automatically<sp/>generated<sp/>after<sp/>each<sp/>commit.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28" refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" kindref="member">uninstall_git_hook</ref>(location):</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Uninstalls<sp/>the<sp/>post-commit<sp/>hook<sp/>from<sp/>the<sp/>specified<sp/>location.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>hook_path<sp/>=<sp/>Path(location)<sp/>/<sp/></highlight><highlight class="stringliteral">&quot;.git/hooks&quot;</highlight><highlight class="normal"><sp/>/<sp/>HOOK_FILENAME</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hook_path.exists():</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hook_path.unlink()</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Post-commit<sp/>hook<sp/>uninstalled<sp/>from<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;No<sp/>post-commit<sp/>hook<sp/>found<sp/>in<sp/>{hook_path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/index.xml b/docs/xml/index.xml
new file mode 100644
index 0000000..01b2ebc
--- /dev/null
+++ b/docs/xml/index.xml
@@ -0,0 +1,351 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygenindex xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="index.xsd" version="1.9.4" xml:lang="en-US">
+  <compound refid="classpenify__hook_1_1api__client_1_1APIClient" kind="class"><name>penify_hook::api_client::APIClient</name>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a130cf688ed35dc0e8cbd8320b6b2d872" kind="variable"><name>api_url</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5bb502603717946ad710b49ad9d95237" kind="variable"><name>AUTH_TOKEN</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7d7e2cf42c54eb4f25adee96a09ee7b0" kind="variable"><name>BEARER_TOKEN</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad9cb741a8baf2d13f845e25a36311086" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac5aad61508c2cafdf6e88e6c7d6c82b3" kind="function"><name>send_file_for_docstring_generation</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a7ff74798e7d428b4e2f20095287eb2ce" kind="function"><name>generate_commit_summary</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1a5d2b4a26b24352d951ea79ecc4ff3402" kind="function"><name>get_supported_file_types</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ac0ada470b897935f9fb372cd0e7e51e3" kind="function"><name>generate_commit_summary_with_llm</name></member>
+    <member refid="classpenify__hook_1_1api__client_1_1APIClient_1ad15b790608e703c8c122aa2ead7dfa99" kind="function"><name>get_api_key</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" kind="class"><name>penify_hook::base_analyzer::BaseAnalyzer</name>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1aa67c06dd12b1bafaeaee81c41dcb7e25" kind="variable"><name>folder_path</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a957e81a1ab561f6cecfbe999e7b85499" kind="variable"><name>repo_path</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a3a9ddfa1dfba81fe21214fe486389369" kind="variable"><name>repo</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a9cca3465b0cc00d78324b0a9eac1d7f5" kind="variable"><name>repo_details</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab702c0c3ba81d159d7c3bcd7ea2abba4" kind="variable"><name>relative_file_path</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a81e9c55709205aaf4ebbe2b41683baf2" kind="variable"><name>api_client</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1a0cac0310ec635aa64a34857cf30ce1eb" kind="variable"><name>supported_file_types</name></member>
+    <member refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer_1ab1296a3d1e9070d891801876b66f7344" kind="function"><name>__init__</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" kind="class"><name>penify_hook::commit_analyzer::CommitDocGenHook</name>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ad93360e31f2ec58a0d7c9f08b219028a" kind="variable"><name>llm_client</name></member>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1af127d86729e226d74dbeb095b008db3e" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" kind="function"><name>get_summary</name></member>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" kind="function"><name>run</name></member>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" kind="function"><name>process_jira_integration</name></member>
+    <member refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1ac999c5cbc852a7ec3b412ccb43c274ca" kind="function"><name>_amend_commit</name></member>
+  </compound>
+  <compound refid="classException" kind="class"><name>Exception</name>
+  </compound>
+  <compound refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" kind="class"><name>penify_hook::file_analyzer::FileAnalyzerGenHook</name>
+    <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a9b03b88a9ce1b9af945279375048dc32" kind="variable"><name>file_path</name></member>
+    <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a190c473090b2a07e7cb43073a3211c4b" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" kind="function"><name>process_file</name></member>
+    <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" kind="function"><name>print_processing</name></member>
+    <member refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" kind="function"><name>run</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" kind="class"><name>penify_hook::folder_analyzer::FolderAnalyzerGenHook</name>
+    <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a53f73d69cc0f00763ee4830e4f0f7393" kind="variable"><name>dir_path</name></member>
+    <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a1bb0358140931d82c7616f12efe31821" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1a70b845318fc7ac3b607daf26378e19ec" kind="function"><name>list_all_files_in_dir</name></member>
+    <member refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook_1afd189d1b8c773bf710a899eb21fd76cc" kind="function"><name>run</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" kind="class"><name>penify_hook::git_analyzer::GitDocGenHook</name>
+    <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a92275fddb43dbef6dfdb6c1ed6e96d0c" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a17549766100e91eb94b5f1a1d34bf481" kind="function"><name>get_modified_files_in_last_commit</name></member>
+    <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a974d2f51315ed6a1965a7fd7e2ced0cd" kind="function"><name>get_modified_lines</name></member>
+    <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a05313caa22b173ce75638f0db08eeb85" kind="function"><name>process_file</name></member>
+    <member refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" kind="function"><name>run</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kind="class"><name>penify_hook::utils::GitRepoNotFoundError</name>
+  </compound>
+  <compound refid="classpenify__hook_1_1jira__client_1_1JiraClient" kind="class"><name>penify_hook::jira_client::JiraClient</name>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" kind="variable"><name>jira_url</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" kind="variable"><name>jira_user</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" kind="variable"><name>jira_api_token</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kind="variable"><name>jira_client</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" kind="function"><name>__init__</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kind="function"><name>is_connected</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" kind="function"><name>extract_issue_keys_from_branch</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kind="function"><name>extract_issue_keys</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kind="function"><name>get_issue_details</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" kind="function"><name>add_comment</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" kind="function"><name>update_issue_status</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" kind="function"><name>format_commit_message_with_jira_info</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" kind="function"><name>get_detailed_issue_context</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" kind="function"><name>get_commit_context_from_issues</name></member>
+    <member refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" kind="function"><name>enhance_commit_message</name></member>
+  </compound>
+  <compound refid="classpenify__hook_1_1llm__client_1_1LLMClient" kind="class"><name>penify_hook::llm_client::LLMClient</name>
+    <member refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kind="variable"><name>model</name></member>
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+    <member refid="namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf" kind="variable"><name>python_requires</name></member>
+  </compound>
+  <compound refid="namespacestd" kind="namespace"><name>std</name>
+  </compound>
+  <compound refid="namespacetests" kind="namespace"><name>tests</name>
+  </compound>
+  <compound refid="namespacetests_1_1conftest" kind="namespace"><name>tests::conftest</name>
+  </compound>
+  <compound refid="namespacetests_1_1test__commit__commands" kind="namespace"><name>tests::test_commit_commands</name>
+  </compound>
+  <compound refid="namespacetests_1_1test__config__commands" kind="namespace"><name>tests::test_config_commands</name>
+  </compound>
+  <compound refid="namespacetests_1_1test__doc__commands" kind="namespace"><name>tests::test_doc_commands</name>
+    <member refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" kind="function"><name>test_generate_doc_no_location</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" kind="function"><name>test_generate_doc_file_location</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" kind="function"><name>test_generate_doc_folder_location</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" kind="function"><name>test_generate_doc_error_handling</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" kind="function"><name>test_setup_docgen_parser</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" kind="function"><name>test_handle_docgen_install_hook</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" kind="function"><name>test_handle_docgen_uninstall_hook</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" kind="function"><name>test_handle_docgen_generate</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" kind="function"><name>test_handle_docgen_no_token</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" kind="function"><name>test_generate_doc_with_file_exception</name></member>
+    <member refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" kind="function"><name>test_generate_doc_with_folder_exception</name></member>
+  </compound>
+  <compound refid="namespacetests_1_1test__web__config" kind="namespace"><name>tests::test_web_config</name>
+  </compound>
+  <compound refid="commit-commands_8md" kind="file"><name>commit-commands.md</name>
+  </compound>
+  <compound refid="config-commands_8md" kind="file"><name>config-commands.md</name>
+  </compound>
+  <compound refid="detailed-usage_8md" kind="file"><name>detailed-usage.md</name>
+  </compound>
+  <compound refid="doc__commands_8md" kind="file"><name>doc_commands.md</name>
+  </compound>
+  <compound refid="example-workflows_8md" kind="file"><name>example-workflows.md</name>
+  </compound>
+  <compound refid="penify-cli-documentation_8md" kind="file"><name>penify-cli-documentation.md</name>
+  </compound>
+  <compound refid="api__client_8py" kind="file"><name>api_client.py</name>
+  </compound>
+  <compound refid="base__analyzer_8py" kind="file"><name>base_analyzer.py</name>
+  </compound>
+  <compound refid="penify__hook_2____init_____8py" kind="file"><name>__init__.py</name>
+  </compound>
+  <compound refid="penify__hook_2commands_2____init_____8py" kind="file"><name>__init__.py</name>
+  </compound>
+  <compound refid="tests_2____init_____8py" kind="file"><name>__init__.py</name>
+  </compound>
+  <compound refid="auth__commands_8py" kind="file"><name>auth_commands.py</name>
+  </compound>
+  <compound refid="commit__commands_8py" kind="file"><name>commit_commands.py</name>
+  </compound>
+  <compound refid="config__commands_8py" kind="file"><name>config_commands.py</name>
+  </compound>
+  <compound refid="doc__commands_8py" kind="file"><name>doc_commands.py</name>
+  </compound>
+  <compound refid="hook__commands_8py" kind="file"><name>hook_commands.py</name>
+  </compound>
+  <compound refid="commit__analyzer_8py" kind="file"><name>commit_analyzer.py</name>
+  </compound>
+  <compound refid="config__command_8py" kind="file"><name>config_command.py</name>
+  </compound>
+  <compound refid="constants_8py" kind="file"><name>constants.py</name>
+  </compound>
+  <compound refid="file__analyzer_8py" kind="file"><name>file_analyzer.py</name>
+  </compound>
+  <compound refid="folder__analyzer_8py" kind="file"><name>folder_analyzer.py</name>
+  </compound>
+  <compound refid="git__analyzer_8py" kind="file"><name>git_analyzer.py</name>
+  </compound>
+  <compound refid="jira__client_8py" kind="file"><name>jira_client.py</name>
+  </compound>
+  <compound refid="llm__client_8py" kind="file"><name>llm_client.py</name>
+  </compound>
+  <compound refid="login__command_8py" kind="file"><name>login_command.py</name>
+  </compound>
+  <compound refid="main_8py" kind="file"><name>main.py</name>
+  </compound>
+  <compound refid="ui__utils_8py" kind="file"><name>ui_utils.py</name>
+  </compound>
+  <compound refid="utils_8py" kind="file"><name>utils.py</name>
+  </compound>
+  <compound refid="README_8md" kind="file"><name>README.md</name>
+  </compound>
+  <compound refid="setup_8py" kind="file"><name>setup.py</name>
+  </compound>
+  <compound refid="conftest_8py" kind="file"><name>conftest.py</name>
+  </compound>
+  <compound refid="test__commit__commands_8py" kind="file"><name>test_commit_commands.py</name>
+  </compound>
+  <compound refid="test__config__commands_8py" kind="file"><name>test_config_commands.py</name>
+  </compound>
+  <compound refid="test__doc__commands_8py" kind="file"><name>test_doc_commands.py</name>
+  </compound>
+  <compound refid="test__web__config_8py" kind="file"><name>test_web_config.py</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows</name>
+  </compound>
+  <compound refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README" kind="page"><name>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README</name>
+  </compound>
+  <compound refid="dir_624fa2a8bce97f0444ac5cca335d4e23" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands</name>
+  </compound>
+  <compound refid="dir_1648a057408aae8db85b8e3797335623" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs</name>
+  </compound>
+  <compound refid="dir_b3b22d2ab7966b65f6b237e3231b41be" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli</name>
+  </compound>
+  <compound refid="dir_f88c3381c1861b3f7ca1f3d63cf244b5" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook</name>
+  </compound>
+  <compound refid="dir_063e2d5fe58a131099a7fe4200cca78c" kind="dir"><name>/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests</name>
+  </compound>
+</doxygenindex>
diff --git a/docs/xml/index.xsd b/docs/xml/index.xsd
new file mode 100644
index 0000000..cfb7041
--- /dev/null
+++ b/docs/xml/index.xsd
@@ -0,0 +1,71 @@
+<?xml version='1.0' encoding='utf-8' ?>
+<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
+  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
+
+  <xsd:element name="doxygenindex" type="DoxygenType"/>
+
+  <xsd:complexType name="DoxygenType">
+    <xsd:sequence>
+      <xsd:element name="compound" type="CompoundType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="version" type="xsd:string" use="required"/>
+    <xsd:attribute ref="xml:lang" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="CompoundType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string"/>
+      <xsd:element name="member" type="MemberType" minOccurs="0" maxOccurs="unbounded"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" use="required"/>
+    <xsd:attribute name="kind" type="CompoundKind" use="required"/>
+  </xsd:complexType>
+
+  <xsd:complexType name="MemberType">
+    <xsd:sequence>
+      <xsd:element name="name" type="xsd:string"/>
+    </xsd:sequence>
+    <xsd:attribute name="refid" type="xsd:string" use="required"/>
+    <xsd:attribute name="kind" type="MemberKind" use="required"/>
+  </xsd:complexType>
+  
+  <xsd:simpleType name="CompoundKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="class"/>
+      <xsd:enumeration value="struct"/>
+      <xsd:enumeration value="union"/>
+      <xsd:enumeration value="interface"/>
+      <xsd:enumeration value="protocol"/>
+      <xsd:enumeration value="category"/>
+      <xsd:enumeration value="exception"/>
+      <xsd:enumeration value="file"/>
+      <xsd:enumeration value="namespace"/>
+      <xsd:enumeration value="group"/>
+      <xsd:enumeration value="page"/>
+      <xsd:enumeration value="example"/>
+      <xsd:enumeration value="dir"/>
+      <xsd:enumeration value="type"/>
+      <xsd:enumeration value="concept"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+  <xsd:simpleType name="MemberKind">
+    <xsd:restriction base="xsd:string">
+      <xsd:enumeration value="define"/>
+      <xsd:enumeration value="property"/>
+      <xsd:enumeration value="event"/>
+      <xsd:enumeration value="variable"/>
+      <xsd:enumeration value="typedef"/>
+      <xsd:enumeration value="enum"/>
+      <xsd:enumeration value="enumvalue"/>
+      <xsd:enumeration value="function"/>
+      <xsd:enumeration value="signal"/>
+      <xsd:enumeration value="prototype"/>
+      <xsd:enumeration value="friend"/>
+      <xsd:enumeration value="dcop"/>
+      <xsd:enumeration value="slot"/>
+    </xsd:restriction>
+  </xsd:simpleType>
+
+</xsd:schema>
+
diff --git a/docs/xml/jira__client_8py.xml b/docs/xml/jira__client_8py.xml
new file mode 100644
index 0000000..7567141
--- /dev/null
+++ b/docs/xml/jira__client_8py.xml
@@ -0,0 +1,438 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="jira__client_8py" kind="file" language="Python">
+    <compoundname>jira_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1jira__client_1_1JiraClient" prot="public">penify_hook::jira_client::JiraClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1jira__client">penify_hook::jira_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1jira__client" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Optional,<sp/>Dict,<sp/>List,<sp/>Any</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info,<sp/>print_success</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>jira<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>JIRA</highlight></codeline>
+<codeline lineno="8" refid="namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>JIRA_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>JIRA_AVAILABLE<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="12" refid="classpenify__hook_1_1jira__client_1_1JiraClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient" kindref="compound">JiraClient</ref>:</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Client<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA<sp/>API</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="16"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a47efc1ec07389c960f2dfb37ba8c09f5" kindref="member">__init__</ref>(self,<sp/>jira_url:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_user:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>jira_api_token:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Initialize<sp/>the<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url:<sp/>Base<sp/>URL<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>JIRA<sp/>instance<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;https://your-domain.atlassian.net&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user:<sp/>JIRA<sp/>username<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>email</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token:<sp/>JIRA<sp/>API<sp/>token</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="26" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a3c0cfecff02a75cb7001509a595b8197" kindref="member">jira_url</ref><sp/>=<sp/>jira_url</highlight></codeline>
+<codeline lineno="27" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ae56104d5aa7bda7bb26d169c4b46038c" kindref="member">jira_user</ref><sp/>=<sp/>jira_user</highlight></codeline>
+<codeline lineno="28" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afc5c90e53b702f9fc27e2ee7d3f991b9" kindref="member">jira_api_token</ref><sp/>=<sp/>jira_api_token</highlight></codeline>
+<codeline lineno="29" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>JIRA_AVAILABLE:</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>package<sp/>not<sp/>available.<sp/>JIRA<sp/>integration<sp/>will<sp/>not<sp/>work.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_url<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_user<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_api_token:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/>JIRA(</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>server=jira_url,</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>basic_auth=(jira_user,<sp/>jira_api_token)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>initialized<sp/>successfully&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Failed<sp/>to<sp/>initialize<sp/>JIRA<sp/>client:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="46" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>(self)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Check<sp/>if<sp/>the<sp/>JIRA<sp/>client<sp/>is<sp/>connected.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" kindref="member">extract_issue_keys_from_branch</ref>(self,<sp/>branch_name:<sp/>str)<sp/>-&gt;<sp/>List[str]:</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Common<sp/>JIRA<sp/>issue<sp/>key<sp/>pattern:<sp/>PROJECT-123</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extracts<sp/>unique<sp/>JIRA<sp/>issue<sp/>keys<sp/>from<sp/>a<sp/>branch<sp/>name.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pattern<sp/>=<sp/></highlight><highlight class="stringliteral">r&apos;[A-Z][A-Z0-9_]+-[0-9]+&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matches<sp/>=<sp/>re.findall(pattern,<sp/>branch_name)</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>matches:</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(f</highlight><highlight class="stringliteral">&quot;Fetching<sp/>relevant<sp/>JIRA<sp/>issues&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>list(set(matches))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="59" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(self,<sp/>text:<sp/>str)<sp/>-&gt;<sp/>List[str]:</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Common<sp/>JIRA<sp/>issue<sp/>key<sp/>pattern:<sp/>PROJECT-123</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Extract<sp/>unique<sp/>JIRA<sp/>issue<sp/>keys<sp/>from<sp/>the<sp/>given<sp/>text.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pattern<sp/>=<sp/></highlight><highlight class="stringliteral">r&apos;[A-Z][A-Z0-9_]+-[0-9]+&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matches<sp/>=<sp/>re.findall(pattern,<sp/>text)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>list(set(matches))<sp/><sp/></highlight><highlight class="comment">#<sp/>Remove<sp/>duplicates</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="66" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(self,<sp/>issue_key:<sp/>str)<sp/>-&gt;<sp/>Optional[Dict[str,<sp/>Any]]:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>details<sp/>of<sp/>a<sp/>JIRA<sp/>issue<sp/>based<sp/>on<sp/>its<sp/>key.</highlight></codeline>
+<codeline lineno="68"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="69"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>detailed<sp/>information<sp/>about<sp/>a<sp/>specified<sp/>JIRA<sp/>issue<sp/>using</highlight></codeline>
+<codeline lineno="70"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>provided<sp/>issue<sp/>key.<sp/>It<sp/>first<sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected;<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal">,<sp/>it<sp/>logs<sp/>a<sp/>warning<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`.<sp/>If<sp/>connected,<sp/>it<sp/>attempts<sp/>to</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>retrieve<sp/>the<sp/>issue<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>server.<sp/>On<sp/>success,<sp/>it<sp/>constructs<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/>dictionary<sp/>containing<sp/>various<sp/>details<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>issue</highlight><highlight class="stringliteral">&apos;s<sp/>key,<sp/>summary,</highlight></codeline>
+<codeline lineno="74"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>status,<sp/>description,<sp/>assignee,<sp/>reporter,<sp/>type,<sp/>priority,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>URL.<sp/>Errors<sp/>during</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>this<sp/>process<sp/>are<sp/>logged,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>returned.</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>JIRA<sp/>issue<sp/>key<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;PROJECT-123&quot;</highlight><highlight class="normal">).</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="80"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.issue(issue_key)</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">:<sp/>issue.key,</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">:<sp/>issue.fields.summary,</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">:<sp/>issue.fields.status.name,</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">:<sp/>issue.fields.description,</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;assignee&apos;</highlight><highlight class="normal">:<sp/>issue.fields.assignee.displayName<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue.fields.assignee<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;reporter&apos;</highlight><highlight class="normal">:<sp/>issue.fields.reporter.displayName<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue.fields.reporter<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">:<sp/>issue.fields.issuetype.name,</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">:<sp/>issue.fields.priority.name<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>issue.fields.priority<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.jira_url}/browse/{issue.key}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>fetching<sp/>issue<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="101" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" kindref="member">add_comment</ref>(self,<sp/>issue_key:<sp/>str,<sp/>comment:<sp/>str)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Adds<sp/>a<sp/>comment<sp/>to<sp/>a<sp/>JIRA<sp/>issue.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa1f374116c64cd5f1492ec7f7e40f9c1" kindref="member">add_comment</ref>(issue_key,<sp/>comment)</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Comment<sp/>added<sp/>to<sp/>{issue_key}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>adding<sp/>comment<sp/>to<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="115" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aca8837552d37bfd611de23441a240826" kindref="member">update_issue_status</ref>(self,<sp/>issue_key:<sp/>str,<sp/>transition_name:<sp/>str)<sp/>-&gt;<sp/>bool:</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Update<sp/>the<sp/>status<sp/>of<sp/>a<sp/>JIRA<sp/>issue.</highlight></codeline>
+<codeline lineno="117"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="118"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>method<sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>connected,<sp/>retrieves<sp/>available</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transitions<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>given<sp/>issue,<sp/>finds<sp/>the<sp/>transition<sp/>ID<sp/>by<sp/>name,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>updates</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>issue</highlight><highlight class="stringliteral">&apos;s<sp/>status<sp/>accordingly.<sp/>If<sp/>any<sp/>step<sp/>fails<sp/>or<sp/>the<sp/>specified<sp/>transition</highlight></codeline>
+<codeline lineno="121"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found,<sp/>appropriate<sp/>logs<sp/>are<sp/>generated,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>returned.</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>key<sp/>of<sp/>the<sp/>JIRA<sp/>issue<sp/>to<sp/>be<sp/>updated.</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_name<sp/>(str):<sp/>The<sp/>name<sp/>of<sp/>the<sp/>desired<sp/>transition.</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bool:<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>status<sp/>was<sp/>successfully<sp/>updated,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/>otherwise.</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>available<sp/>transitions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transitions<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.transitions(issue_key)</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Find<sp/>the<sp/>transition<sp/>ID<sp/>based<sp/>on<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_id<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>t<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>transitions:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>t[</highlight><highlight class="stringliteral">&apos;name&apos;</highlight><highlight class="normal">].lower()<sp/>==<sp/>transition_name.lower():</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>transition_id<sp/>=<sp/>t[</highlight><highlight class="stringliteral">&apos;id&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>transition_id:</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.transition_issue(issue_key,<sp/>transition_id)</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.info(f</highlight><highlight class="stringliteral">&quot;Updated<sp/>{issue_key}<sp/>status<sp/>to<sp/>{transition_name}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Transition<sp/>&apos;{transition_name}&apos;<sp/>not<sp/>found<sp/>for<sp/>{issue_key}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>updating<sp/>status<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="157" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" kindref="member">format_commit_message_with_jira_info</ref>(self,<sp/>commit_title:<sp/>str,<sp/>commit_description:<sp/>str,<sp/>issue_keys:<sp/>List[str]<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>no<sp/>issue<sp/>keys<sp/>provided,<sp/>extract<sp/>them<sp/>from<sp/>title<sp/>and<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>issue<sp/>information.</highlight></codeline>
+<codeline lineno="160"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="161"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>updates<sp/>the<sp/>provided<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/>by</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>incorporating<sp/>JIRA<sp/>issue<sp/>keys.<sp/>If<sp/>no<sp/>issue<sp/>keys<sp/>are<sp/>supplied,<sp/>it<sp/>extracts<sp/>them</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description.<sp/>It<sp/>then<sp/>formats<sp/>the<sp/>commit<sp/>title<sp/>to</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>include<sp/>the<sp/>first<sp/>issue<sp/>key<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>already<sp/>present<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>appends<sp/>detailed</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>information<sp/>about<sp/>each<sp/>issue<sp/>to<sp/>the<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_title<sp/>(str):<sp/>The<sp/>original<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_description<sp/>(str):<sp/>The<sp/>original<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>(List[str]?):<sp/>A<sp/>list<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>commit<sp/>message.<sp/>If<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>provided,<sp/>issue<sp/>keys<sp/>will<sp/>be<sp/>extracted<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>both<sp/>the<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>description.</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>updated<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>JIRA</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>information<sp/>included.</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="177"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title_keys<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(commit_title)</highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc_keys<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1ad2823ad1d3baaedd38039913c3a97fd7" kindref="member">extract_issue_keys</ref>(commit_description)</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>=<sp/>list(set(title_keys<sp/>+<sp/>desc_keys))</highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>commit_title,<sp/>commit_description</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Format<sp/>the<sp/>title<sp/>to<sp/>include<sp/>the<sp/>issue<sp/>key<sp/>if<sp/>not<sp/>already<sp/>there</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_title<sp/>=<sp/>commit_title</highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>any(key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>commit_title<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys):</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>the<sp/>first<sp/>issue<sp/>key<sp/>to<sp/>the<sp/>title</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_title<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{issue_keys[0]}:<sp/>{commit_title}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>issue<sp/>details<sp/>to<sp/>the<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_description<sp/>=<sp/>commit_description</highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_details_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n\n##<sp/>Related<sp/>JIRA<sp/>Issues\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>has_issue_details<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue_key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys:</highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(issue_key)</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>details:</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>has_issue_details<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_details_section<sp/>+=<sp/>(</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;*<sp/>**[{details[&apos;key&apos;]}]({details[&apos;url&apos;]})**:<sp/>{details[&apos;summary&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>*<sp/>Status:<sp/>{details[&apos;status&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>*<sp/>Type:<sp/>{details[&apos;type&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>has_issue_details:</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>updated_description<sp/>+=<sp/>issue_details_section</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>updated_title,<sp/>updated_description</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"></highlight></codeline>
+<codeline lineno="212" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" kindref="member">get_detailed_issue_context</ref>(self,<sp/>issue_key:<sp/>str)<sp/>-&gt;<sp/>Dict[str,<sp/>Any]:</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Retrieve<sp/>comprehensive<sp/>details<sp/>about<sp/>a<sp/>JIRA<sp/>issue<sp/>including<sp/>context<sp/>for<sp/>better</highlight></codeline>
+<codeline lineno="214"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="215"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="216"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>detailed<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>a<sp/>specified<sp/>JIRA<sp/>issue<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>constructs<sp/>a<sp/>dictionary<sp/>containing<sp/>various<sp/>context<sp/>fields<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>issue</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>summary,<sp/>description,<sp/>type,<sp/>status,<sp/>priority,<sp/>comments,<sp/>URL,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>additional</highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>custom<sp/>fields<sp/>like<sp/>acceptance<sp/>criteria<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>sprint<sp/>information.<sp/>It<sp/>handles</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>errors<sp/>by<sp/>logging<sp/>appropriate<sp/>warnings<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>errors.</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_key<sp/>(str):<sp/>The<sp/>JIRA<sp/>issue<sp/>key<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;PROJECT-123&quot;</highlight><highlight class="normal">).</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict[str,<sp/>Any]:<sp/>A<sp/>dictionary<sp/>containing<sp/>business<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>technical<sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>issue.</highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="228"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(</highlight><highlight class="stringliteral">&quot;JIRA<sp/>client<sp/>not<sp/>connected&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.issue(issue_key)</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>issue<sp/>history<sp/>and<sp/>comments<sp/>for<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comments<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>comment<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aefb3f96c79358cf3a95d96d3747235b6" kindref="member">jira_client</ref>.comments(issue):</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comments.append(comment.body)</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.warning(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>fetch<sp/>comments<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Build<sp/>a<sp/>comprehensive<sp/>context<sp/>object</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">:<sp/>issue.key,</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">:<sp/>issue.fields.summary,</highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">:<sp/>issue.fields.description<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">:<sp/>issue.fields.issuetype.name,</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">:<sp/>issue.fields.status.name,</highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">:<sp/>issue.fields.priority.name<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/></highlight><highlight class="stringliteral">&apos;priority&apos;</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>issue.fields.priority<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;None&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">:<sp/>comments[:3],<sp/><sp/></highlight><highlight class="comment">#<sp/>Limit<sp/>to<sp/>latest<sp/>3<sp/>comments</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/>f</highlight><highlight class="stringliteral">&quot;{self.jira_url}/browse/{issue.key}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>acceptance<sp/>criteria<sp/>if<sp/>available<sp/>(common<sp/>custom<sp/>fields)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Field<sp/>names<sp/>may<sp/>vary<sp/>by<sp/>JIRA<sp/>instance</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>acceptance_criteria<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>field_name<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>[</highlight><highlight class="stringliteral">&apos;customfield_10001&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;customfield_10207&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hasattr(issue.fields,<sp/>field_name):</highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>field_value<sp/>=<sp/>getattr(issue.fields,<sp/>field_name)</highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>field_value:</highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>acceptance_criteria<sp/>=<sp/>field_value</highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception:</highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">pass</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>acceptance_criteria:</highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal">]<sp/>=<sp/>acceptance_criteria</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>extract<sp/>sprint<sp/>information</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_field<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>field_name<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>dir(issue.fields):</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>field_name.lower():</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_field<sp/>=<sp/>field_name</highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>sprint_field:</highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sprint_value<sp/>=<sp/>getattr(issue.fields,<sp/>sprint_field)</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>sprint_value:</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>isinstance(sprint_value,<sp/>list)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>len(sprint_value)<sp/>&gt;<sp/>0:</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal">]<sp/>=<sp/>sprint_value[0]</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context[</highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal">]<sp/>=<sp/>str(sprint_value)</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.debug(f</highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>extract<sp/>sprint<sp/>information:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>context</highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logging.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>fetching<sp/>detailed<sp/>information<sp/>for<sp/>{issue_key}:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="294"><highlight class="normal"></highlight></codeline>
+<codeline lineno="295" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" kindref="member">get_commit_context_from_issues</ref>(self,<sp/>issue_keys:<sp/>List[str])<sp/>-&gt;<sp/>Dict[str,<sp/>Any]:</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Gather<sp/>contextual<sp/>information<sp/>from<sp/>JIRA<sp/>issues<sp/>to<sp/>improve<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="297"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="298"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>processes<sp/>a<sp/>list<sp/>of<sp/>JIRA<sp/>issue<sp/>keys,<sp/>retrieves<sp/>detailed<sp/>context</highlight></codeline>
+<codeline lineno="299"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>each<sp/>issue,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>aggregates<sp/>it<sp/>into<sp/>a<sp/>dictionary<sp/>that<sp/>can<sp/>be<sp/>used<sp/>to<sp/>enhance</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit<sp/>messages.<sp/>It<sp/>first<sp/>retrieves<sp/>the<sp/>primary<sp/>issue<sp/>(the<sp/>first<sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list)<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>gathers<sp/>basic<sp/>details<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>any<sp/>related<sp/>issues.<sp/>The<sp/>resulting</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>includes<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>both<sp/>the<sp/>primary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>related<sp/>issues,<sp/>along</highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>all<sp/>issue<sp/>keys.</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys:<sp/>List<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>gather<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict<sp/>containing<sp/>business<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>technical<sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>issues</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="311"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{}</highlight></codeline>
+<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>primary<sp/>issue<sp/>(first<sp/>in<sp/>the<sp/>list)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary_issue<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1aa967169a4b7970c67c0947b9ac56f746" kindref="member">get_detailed_issue_context</ref>(issue_keys[0])</highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>basic<sp/>info<sp/>for<sp/>related<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_issues<sp/>=<sp/>[]</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys[1:]:<sp/><sp/></highlight><highlight class="comment">#<sp/>Skip<sp/>the<sp/>first<sp/>one<sp/>as<sp/>it&apos;s<sp/>the<sp/>primary</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>details<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a65f6924819084b7c8d268956a784804a" kindref="member">get_issue_details</ref>(key)</highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>details:</highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_issues.append(details)</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Build<sp/>context<sp/>dictionary<sp/>for<sp/>commit<sp/>message<sp/>enhancement</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">:<sp/>primary_issue,</highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">:<sp/>related_issues,</highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;all_keys&apos;</highlight><highlight class="normal">:<sp/>issue_keys</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>context</highlight></codeline>
+<codeline lineno="332"><highlight class="normal"></highlight></codeline>
+<codeline lineno="333" refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a70d2c5a6432aa6f238da0ff65d49a760" kindref="member">enhance_commit_message</ref>(self,<sp/>title:<sp/>str,<sp/>description:<sp/>str,<sp/>issue_keys:<sp/>List[str])<sp/>-&gt;<sp/>tuple:</highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Enhance<sp/>a<sp/>commit<sp/>message<sp/>with<sp/>business<sp/>and<sp/>technical<sp/>context<sp/>from<sp/>JIRA<sp/>issues.</highlight></codeline>
+<codeline lineno="335"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="336"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>first<sp/>checks<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/>list<sp/>of<sp/>issue<sp/>keys<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>empty<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>there<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>no</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>connection.<sp/>If<sp/>so,<sp/>it<sp/>returns<sp/>the<sp/>original<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/>without</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>modification.<sp/>It<sp/>then<sp/>retrieves<sp/>context<sp/>information<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>specified<sp/>JIRA</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issues.<sp/>If<sp/>the<sp/>primary<sp/>issue<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>missing,<sp/>it<sp/>formats<sp/>the<sp/>commit<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>basic<sp/>JIRA<sp/>info.<sp/><sp/>The<sp/>function<sp/>enhances<sp/>the<sp/>commit<sp/>title<sp/>by<sp/>prefixing<sp/>it<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>primary<sp/>issue<sp/>key<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>already<sp/>included.<sp/>It<sp/>appends<sp/>a<sp/>business<sp/>context</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>section<sp/>to<sp/>the<sp/>description,<sp/>including<sp/>details<sp/>like<sp/>issue<sp/>type,<sp/>status,</highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>priority,<sp/>sprint,<sp/>acceptance<sp/>criteria,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>a<sp/>condensed<sp/>issue<sp/>description.<sp/>If</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comments<sp/>are<sp/>available,<sp/>they<sp/>are<sp/>added<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>technical<sp/>notes.<sp/>Finally,<sp/>related</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issues<sp/>are<sp/>listed.</highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>(str):<sp/>Original<sp/>commit<sp/>title.</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>(str):<sp/>Original<sp/>commit<sp/>description.</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>issue_keys<sp/>(List[str]):<sp/>List<sp/>of<sp/>JIRA<sp/>issue<sp/>keys<sp/>to<sp/>include<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>enhanced<sp/>commit<sp/>message.</highlight></codeline>
+<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>enhanced<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>added</highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>JIRA<sp/>issues.</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="356"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>issue_keys<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a00d0f9ae006313a21576362d26ac5ec8" kindref="member">is_connected</ref>():</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>title,<sp/>description</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>context<sp/>information<sp/>from<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>context<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1afb41ce6f13c30b1265d439ddf04bf2cd" kindref="member">get_commit_context_from_issues</ref>(issue_keys)</highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>context<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>context.get(</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a49ea1149758f7f5212149d357b13cc23" kindref="member">format_commit_message_with_jira_info</ref>(title,<sp/>description,<sp/>issue_keys)</highlight></codeline>
+<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>primary<sp/>issue</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary<sp/>=<sp/>context[</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Enhance<sp/>title<sp/>with<sp/>primary<sp/>issue<sp/>key<sp/>and<sp/>summary<sp/>if<sp/>not<sp/>already<sp/>included</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_title<sp/>=<sp/>title</highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>any(key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>title<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>key<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>issue_keys):</highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>key<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;key&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Keep<sp/>original<sp/>title,<sp/>but<sp/>prefix<sp/>with<sp/>issue<sp/>key</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_title<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;{key}:<sp/>{title}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Enhance<sp/>description<sp/>with<sp/>business<sp/>and<sp/>technical<sp/>context</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>=<sp/>description</highlight></codeline>
+<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>business<sp/>context<sp/>section</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n\n##<sp/>Business<sp/>Context\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Issue**:<sp/>[{primary[&apos;key&apos;]}]({primary[&apos;url&apos;]})<sp/>-<sp/>{primary[&apos;summary&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Type**:<sp/>{primary[&apos;type&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Status**:<sp/>{primary[&apos;status&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Priority**:<sp/>{primary[&apos;priority&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;sprint&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;**Sprint**:<sp/>{primary[&apos;sprint&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;\n**Acceptance<sp/>Criteria**:\n{primary[&apos;acceptance_criteria&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>primary.get(</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Include<sp/>a<sp/>condensed<sp/>version<sp/>of<sp/>the<sp/>description<sp/>if<sp/>it&apos;s<sp/>not<sp/>too<sp/>long</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(desc)<sp/>&gt;<sp/>300:</highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>=<sp/>desc[:300]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>business_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;\n**Issue<sp/>Description**:\n{desc}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>technical<sp/>context<sp/>from<sp/>comments<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>primary.get(</highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tech_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n##<sp/>Technical<sp/>Notes\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>technical<sp/>details<sp/>from<sp/>comments<sp/>(often<sp/>devs<sp/>discuss<sp/>implementation<sp/>details<sp/>here)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>comment<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary[</highlight><highlight class="stringliteral">&apos;comments&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(comment)<sp/>&gt;<sp/>200:<sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>include<sp/>shorter<sp/>technical<sp/>notes</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comment<sp/>=<sp/>comment[:200]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tech_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;-<sp/>{comment}\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(tech_section)<sp/>&gt;<sp/>50:<sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>add<sp/>if<sp/>there&apos;s<sp/>substantial<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section<sp/>+<sp/>tech_section</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section</highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>business_section</highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>related<sp/>issues<sp/>section</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>context.get(</highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_section<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n##<sp/>Related<sp/>Issues\n\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>issue<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>context[</highlight><highlight class="stringliteral">&apos;related_issues&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>related_section<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;-<sp/>[{issue[&apos;key&apos;]}]({issue[&apos;url&apos;]}):<sp/>{issue[&apos;summary&apos;]}<sp/>({issue[&apos;status&apos;]})\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>enhanced_description<sp/>+=<sp/>related_section</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>enhanced_title,<sp/>enhanced_description</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/llm__client_8py.xml b/docs/xml/llm__client_8py.xml
new file mode 100644
index 0000000..d8d190e
--- /dev/null
+++ b/docs/xml/llm__client_8py.xml
@@ -0,0 +1,189 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="llm__client_8py" kind="file" language="Python">
+    <compoundname>llm_client.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1llm__client_1_1LLMClient" prot="public">penify_hook::llm_client::LLMClient</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1llm__client">penify_hook::llm_client</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1llm__client" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>typing<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Dict,<sp/>Optional,<sp/>List,<sp/>Any,<sp/>Union</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Removed<sp/>eager<sp/>litellm<sp/>import<sp/>and<sp/>timing<sp/>code</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Will<sp/>lazy<sp/>load<sp/>litellm<sp/>only<sp/>when<sp/>needed</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10" refid="classpenify__hook_1_1llm__client_1_1LLMClient" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient" kindref="compound">LLMClient</ref>:</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="12"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Client<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>LLM<sp/>models<sp/>using<sp/>LiteLLM.</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="15" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76d92354f585ab4bb291169f9f530764" kindref="member">__init__</ref>(self,<sp/>model:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>api_base:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>api_key:<sp/>str<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Initialize<sp/>the<sp/>LLM<sp/>client.</highlight></codeline>
+<codeline lineno="18"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model:<sp/>LLM<sp/>model<sp/>to<sp/>use<sp/>(e.g.,<sp/>&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;ollama/llama2&quot;</highlight><highlight class="normal">,<sp/>etc.)</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base:<sp/>Base<sp/>URL<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>requests<sp/>(e.g.,<sp/></highlight><highlight class="stringliteral">&quot;http://localhost:11434&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>Ollama)</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key:<sp/>API<sp/>key<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>LLM<sp/>service</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Configure<sp/>litellm<sp/>if<sp/>parameters<sp/>are<sp/>provided</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref><sp/>=<sp/>model</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_base:</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.environ[</highlight><highlight class="stringliteral">&quot;OPENAI_API_BASE&quot;</highlight><highlight class="normal">]<sp/>=<sp/>api_base</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>api_key:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>os.environ[</highlight><highlight class="stringliteral">&quot;OPENAI_API_KEY&quot;</highlight><highlight class="normal">]<sp/>=<sp/>api_key</highlight></codeline>
+<codeline lineno="30" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@property</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="33" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" kindref="member">litellm</ref>(self):</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Returns<sp/>the<sp/>litellm<sp/>module,<sp/>loading<sp/>it<sp/>if<sp/>necessary.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>litellm</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref><sp/>=<sp/>litellm</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a76c2e9805f805624ab9c55a9f1f8d362" kindref="member">_litellm</ref></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="40" refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1a2ad3014dac466ee1d8e00306d0cf2000" kindref="member">generate_commit_summary</ref>(self,<sp/>diff:<sp/>str,<sp/>message:<sp/>str,<sp/>generate_description:<sp/>bool,<sp/>repo_details:<sp/>Dict,<sp/>jira_context:<sp/>Dict<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)<sp/>-&gt;<sp/>Dict:</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>concise<sp/>and<sp/>descriptive<sp/>commit<sp/>summary<sp/>based<sp/>on<sp/>Git<sp/>diff,<sp/>user</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>instructions,<sp/>repository<sp/>details,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>optional<sp/>JIRA<sp/>context.</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>constructs<sp/>a<sp/>prompt<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>an<sp/>LLM<sp/>to<sp/>produce<sp/>a<sp/>commit<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>requested,<sp/>a<sp/>detailed<sp/>description.<sp/>The<sp/>summary<sp/>adheres<sp/>to<sp/>Semantic<sp/>Commit</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Messages<sp/>guidelines.<sp/>If<sp/>JIRA<sp/>context<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>provided,<sp/>it<sp/>enriches<sp/>the<sp/>prompt<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>relevant<sp/>issue<sp/>information.</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>(str):<sp/>Git<sp/>diff<sp/>of<sp/>changes.</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/>(str):<sp/>User-provided<sp/>commit<sp/>message<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/>instructions.</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description<sp/>(bool):<sp/>Flag<sp/>indicating<sp/>whether<sp/>to<sp/>include<sp/>a<sp/>detailed<sp/>description<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_details<sp/>(Dict):<sp/>Details<sp/>about<sp/>the<sp/>repository.</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_context<sp/>(Dict?):<sp/>Optional<sp/>JIRA<sp/>issue<sp/>context<sp/>to<sp/>enhance<sp/>the<sp/>summary.</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Dict:<sp/>A<sp/>dictionary<sp/>containing<sp/>the<sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>commit.<sp/>If</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`generate_description`<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>the<sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/>key<sp/>may<sp/>be<sp/>absent.</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Raises:</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ValueError:<sp/>If<sp/>the<sp/>LLM<sp/>model<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>configured.</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="63"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref>:</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;LLM<sp/>model<sp/>not<sp/>configured.<sp/>Please<sp/>provide<sp/>a<sp/>model<sp/>when<sp/>initializing<sp/>LLMClient.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Limit<sp/>diff<sp/>size<sp/>to<sp/>avoid<sp/>token<sp/>limits</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>max_diff_chars<sp/>=<sp/>10000</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(diff)<sp/>&gt;<sp/>max_diff_chars:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>diff<sp/>=<sp/>diff[:max_diff_chars]<sp/>+<sp/>f</highlight><highlight class="stringliteral">&quot;\n...<sp/>(diff<sp/>truncated,<sp/>total<sp/>{len(diff)}<sp/>characters)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>prompt<sp/>for<sp/>the<sp/>LLM</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>=<sp/>f</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="73"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Based<sp/>on<sp/>the<sp/>Git<sp/>diff<sp/>below,<sp/>generate<sp/>a<sp/>concise<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>descriptive<sp/>commit<sp/>summary.</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>User<sp/>instructions:<sp/>{message}</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="77"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="78"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>JIRA<sp/>context<sp/>if<sp/>available</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>jira_context<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>jira_context.get(</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">):</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>primary<sp/>=<sp/>jira_context[</highlight><highlight class="stringliteral">&apos;primary_issue&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="82"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="83"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JIRA<sp/>ISSUE<sp/>INFORMATION:</highlight></codeline>
+<codeline lineno="84"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Issue<sp/>Key:<sp/>{primary[&apos;key&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Summary:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;summary&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Type:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;type&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Status:<sp/>{primary[</highlight><highlight class="stringliteral">&apos;status&apos;</highlight><highlight class="normal">]}</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="89"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="90"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]:</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Include<sp/>a<sp/>condensed<sp/>version<sp/>of<sp/>the<sp/>description</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>primary[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>len(description)<sp/>&gt;<sp/>500:</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/>description[:500]<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;...&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;Description:<sp/>{description}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;acceptance_criteria&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>primary:</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f</highlight><highlight class="stringliteral">&quot;Acceptance<sp/>Criteria:<sp/>{primary[&apos;acceptance_criteria&apos;]}\n&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="101"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="102"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Please<sp/>make<sp/>sure<sp/>your<sp/>commit<sp/>message<sp/>addresses<sp/>the<sp/>business<sp/>requirements<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>issue</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>accurately<sp/>describing<sp/>the<sp/>technical<sp/>changes<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>diff.</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>prompt<sp/>+=<sp/>f&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="107"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="108"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Git<sp/>diff:</highlight></codeline>
+<codeline lineno="109"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>```</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{diff}</highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>```</highlight></codeline>
+<codeline lineno="112"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Please<sp/>provide:</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1.<sp/>A<sp/>short,<sp/>focused<sp/>commit<sp/>title<sp/>(50-72<sp/>characters)<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>a<sp/>Semantic<sp/>Commit<sp/>Messages<sp/>format.<sp/>Format:<sp/>&lt;type&gt;(&lt;scope&gt;):<sp/>&lt;subject&gt;</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="stringliteral">&apos;2.<sp/>A<sp/>detailed<sp/>description<sp/>that<sp/>explains<sp/>what<sp/>was<sp/>changed,<sp/>why<sp/>it<sp/>was<sp/>changed<sp/>in<sp/>both<sp/>business<sp/>and<sp/>technical<sp/>aspects,<sp/>and<sp/>any<sp/>important<sp/>context&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">}</highlight></codeline>
+<codeline lineno="116"><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>List<sp/>of<sp/>Semantic<sp/>Commit<sp/>Message<sp/>types<sp/>that<sp/>you<sp/>can<sp/>use:</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>feat:<sp/>(new<sp/>feature<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>user,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>a<sp/>new<sp/>feature<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>build<sp/>script)</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>fix:<sp/>(bug<sp/>fix<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>user,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>a<sp/>fix<sp/>to<sp/>a<sp/>build<sp/>script)</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>docs:<sp/>(changes<sp/>to<sp/>the<sp/>documentation)</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>style:<sp/>(formatting,<sp/>missing<sp/>semi<sp/>colons,<sp/>etc;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>refactor:<sp/>(refactoring<sp/>production<sp/>code,<sp/>eg.<sp/>renaming<sp/>a<sp/>variable)</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>test:<sp/>(adding<sp/>missing<sp/>tests,<sp/>refactoring<sp/>tests;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>chore:<sp/>(updating<sp/>grunt<sp/>tasks<sp/>etc;<sp/>no<sp/>production<sp/>code<sp/>change)</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Format<sp/>your<sp/>response<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>valid<sp/>JSON<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal"><sp/>{</highlight><highlight class="stringliteral">&quot;and<sp/>&apos;description&apos;&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;&apos;</highlight><highlight class="normal">}<sp/>keys.</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="128"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>the<sp/>LLM<sp/>using<sp/>litellm<sp/>-<sp/>now<sp/>using<sp/>the<sp/>lazy-loaded<sp/>property</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>response<sp/>=<sp/>self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1ad6f06658ca922793f879474f2234518e" kindref="member">litellm</ref>.completion(</highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=self.<ref refid="classpenify__hook_1_1llm__client_1_1LLMClient_1abc2cb6b1d6d9b5dc16401ca078ec8c10" kindref="member">model</ref>,</highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>messages=[{</highlight><highlight class="stringliteral">&quot;role&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;user&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;content&quot;</highlight><highlight class="normal">:<sp/>prompt}],</highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>temperature=0.2,</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>max_tokens=800<sp/><sp/></highlight><highlight class="comment">#<sp/>Increased<sp/>token<sp/>limit<sp/>to<sp/>accommodate<sp/>detailed<sp/>descriptions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>content<sp/>=<sp/>response.choices[0].message.content</highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Extract<sp/>JSON<sp/>from<sp/>the<sp/>response</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Try<sp/>to<sp/>parse<sp/>the<sp/>entire<sp/>content<sp/>as<sp/>JSON</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>json.loads(content)</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>isinstance(result,<sp/>dict)<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;title&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>JSON<sp/>structure&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>json.JSONDecodeError:</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>that<sp/>fails,<sp/>try<sp/>to<sp/>extract<sp/>JSON<sp/>from<sp/>the<sp/>content</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>json_match<sp/>=<sp/>re.search(</highlight><highlight class="stringliteral">r&apos;```json\s*(.*?)\s*```&apos;</highlight><highlight class="normal">,<sp/>content,<sp/>re.DOTALL)</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>json_match:</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>json.loads(json_match.group(1))</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Last<sp/>resort:<sp/>extract<sp/>title<sp/>and<sp/>description<sp/>directly</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>lines<sp/>=<sp/>content.split(</highlight><highlight class="stringliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>title<sp/>=<sp/>next((line<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>lines<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.strip()),<sp/></highlight><highlight class="stringliteral">&quot;Generated<sp/>commit&quot;</highlight><highlight class="normal">).strip()</highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">.join(line<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>line<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>lines[1:]<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>line.strip())</highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;title&quot;</highlight><highlight class="normal">:<sp/>title,</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;description&quot;</highlight><highlight class="normal">:<sp/>description</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>generate_description<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>result:</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>If<sp/>description<sp/>is<sp/>missing<sp/>and<sp/>user<sp/>requested<sp/>it,<sp/>add<sp/>a<sp/>placeholder</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>del<sp/>result[</highlight><highlight class="stringliteral">&apos;description&apos;</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sys.exit(f</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Fallback<sp/>to<sp/>a<sp/>basic<sp/>summary<sp/>if<sp/>LLM<sp/>fails</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;Error<sp/>generating<sp/>commit<sp/>summary<sp/>with<sp/>LLM:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;title&quot;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&quot;Update<sp/>code&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/login__command_8py.xml b/docs/xml/login__command_8py.xml
new file mode 100644
index 0000000..d8d68af
--- /dev/null
+++ b/docs/xml/login__command_8py.xml
@@ -0,0 +1,30 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="login__command_8py" kind="file" language="Python">
+    <compoundname>login_command.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1login__command">penify_hook::login_command</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" refkind="member"><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" kindref="member">setup_login_parser</ref>(parser):</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>command-line<sp/>arguments<sp/>for<sp/>login.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="3"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&quot;--token&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Specify<sp/>API<sp/>token<sp/>directly&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>all<sp/>other<sp/>necessary<sp/>arguments<sp/>for<sp/>login<sp/>command</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="6" refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" kindref="member">handle_login</ref>(args):</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Initiates<sp/>a<sp/>user<sp/>login<sp/>process<sp/>using<sp/>predefined<sp/>constants<sp/>and<sp/>the<sp/>`login`</highlight></codeline>
+<codeline lineno="9"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>function.&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1constants" kindref="compound">penify_hook.constants</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>API_URL,<sp/>DASHBOARD_URL</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands" kindref="compound">penify_hook.commands.auth_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>login</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Only<sp/>import<sp/>dependencies<sp/>needed<sp/>for<sp/>login<sp/>functionality<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" kindref="member">login</ref>(API_URL,<sp/>DASHBOARD_URL)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/main_8py.xml b/docs/xml/main_8py.xml
new file mode 100644
index 0000000..37d807e
--- /dev/null
+++ b/docs/xml/main_8py.xml
@@ -0,0 +1,101 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="main_8py" kind="file" language="Python">
+    <compoundname>main.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1main">penify_hook::main</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1main" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>argparse</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6" refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" kindref="member">main</ref>():</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Main<sp/>function<sp/>to<sp/>handle<sp/>command-line<sp/>interface<sp/>(CLI)<sp/>interactions<sp/>with<sp/>Penify</highlight></codeline>
+<codeline lineno="9"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>services.</highlight></codeline>
+<codeline lineno="10"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="11"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>tool<sp/>provides<sp/>a<sp/>command-line<sp/>interface<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>smart<sp/>commit</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>messages,<sp/>configuring<sp/>local-LLM<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generating<sp/>code<sp/>documentation.<sp/>It</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>supports<sp/>basic<sp/>commands<sp/>that<sp/>do<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>require<sp/>login<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>advanced<sp/>commands<sp/>that</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>require<sp/>user<sp/>authentication.<sp/>The<sp/>`--version`<sp/>flag<sp/>can<sp/>be<sp/>used<sp/>to<sp/>display<sp/>the</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/>version<sp/>information.</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="17"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>argparse.ArgumentParser(</highlight></codeline>
+<codeline lineno="18"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>description=&quot;&quot;&quot;Penify<sp/>CLI<sp/>tool<sp/>for:</highlight></codeline>
+<codeline lineno="19"><highlight class="stringliteral">1.<sp/>AI<sp/>commit<sp/>message<sp/>generation<sp/>with<sp/>JIRA<sp/>integration<sp/>to<sp/>enhance<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral">2.<sp/>Generating<sp/>Code<sp/>Documentation,<sp/>it<sp/>requires<sp/>SignUp<sp/>to<sp/>Penify</highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral">3.<sp/>For<sp/>more<sp/>information,<sp/>visit<sp/>https://penify.wiki/dpc1&quot;&quot;&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>formatter_class=argparse.RawDescriptionHelpFormatter</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"></highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Add<sp/>version<sp/>flag</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument(</highlight><highlight class="stringliteral">&apos;--version&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-v&apos;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&apos;store_true&apos;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&apos;Show<sp/>version<sp/>information&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/>subparsers<sp/>=<sp/>parser.add_subparsers(title=</highlight><highlight class="stringliteral">&quot;options&quot;</highlight><highlight class="normal">,<sp/>dest=</highlight><highlight class="stringliteral">&quot;subcommands&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Group<sp/>commands<sp/>logically</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>basic_title<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Basic<sp/>Commands<sp/>(No<sp/>login<sp/>required)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>advanced_title<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Advanced<sp/>Commands<sp/>(Login<sp/>required)&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="33"><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>grouped<sp/>subparsers<sp/>(visually<sp/>separated<sp/>in<sp/>help<sp/>output)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument_group(basic_title)</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/>parser.add_argument_group(advanced_title)</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Set<sp/>up<sp/>subparsers<sp/>with<sp/>proper<sp/>imports<sp/>upfront</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/>commit_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;commit&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM(no<sp/>login<sp/>required).&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.commit_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_commit_parser</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(commit_parser)</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>config_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Configure<sp/>local-LLM<sp/>and<sp/>JIRA.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.config_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_config_parser</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" kindref="member">setup_config_parser</ref>(config_parser)</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/>login_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;login&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Log<sp/>in<sp/>to<sp/>Penify<sp/>to<sp/>use<sp/>advanced<sp/>features<sp/>like<sp/>&apos;docgen&apos;<sp/>generation.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.login_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_login_parser</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" kindref="member">setup_login_parser</ref>(login_parser)</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>docgen_parser<sp/>=<sp/>subparsers.add_parser(</highlight><highlight class="stringliteral">&quot;docgen&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;[REQUIRES<sp/>LOGIN]<sp/>Generate<sp/>code<sp/>documentation<sp/>for<sp/>the<sp/>Git<sp/>diff,<sp/>file<sp/>or<sp/>folder.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.doc_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup_docgen_parser</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(docgen_parser)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>args<sp/>without<sp/>validation<sp/>first<sp/>to<sp/>check<sp/>for<sp/>simple<sp/>flags<sp/>like<sp/>--version</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--version&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>sys.argv<sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;-v&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>sys.argv:</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>importlib.metadata<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>version</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;penify<sp/>version<sp/>{version(&apos;penify&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(</highlight><highlight class="stringliteral">&quot;penify<sp/>version<sp/>0.2.2&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Parse<sp/>the<sp/>arguments<sp/>to<sp/>determine<sp/>which<sp/>command<sp/>was<sp/>requested</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args()<sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Handle<sp/>the<sp/>commands</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;commit&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1ui__utils" kindref="compound">penify_hook.ui_utils</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>print_info</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(</highlight><highlight class="stringliteral">&quot;Please<sp/>wait<sp/>while<sp/>we<sp/>generate<sp/>the<sp/>commit<sp/>message...&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.commit_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_commit</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args)</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.config_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_config</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" kindref="member">handle_config</ref>(args)</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;login&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.login_command<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_login</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" kindref="member">handle_login</ref>(args)</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>args.subcommands<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;docgen&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>.commands.doc_commands<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>handle_docgen</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.print_help()</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>__name__<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;__main__&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/>sys.exit(<ref refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" kindref="member">main</ref>())</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
new file mode 100644
index 0000000..3f93092
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README.xml
@@ -0,0 +1,163 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README</compoundname>
+    <title>Penify CLI Tool</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><image type="html" name="https://github.com/yourorganization/penify-cli/workflows/Tests/badge.svg" alt="Tests" inline="yes"></image>
+ <image type="html" name="./coverage.svg" alt="Coverage" inline="yes"></image>
+</para>
+<para>A CLI tool to generate smart commit messages, code documentation, and more.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md157">
+<title>Features</title>
+<para><itemizedlist>
+<listitem><para>Automatically generate documentation for your code</para>
+</listitem><listitem><para>Support for multiple programming languages</para>
+</listitem><listitem><para>Git hook integration for automatic documentation on commits</para>
+</listitem><listitem><para>Folder and file analysis</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md158">
+<title>Installation</title>
+<para>Install from PyPI:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md159">
+<title>Usage</title>
+<para>Penify CLI provides several subcommands for different functionalities, organized into basic commands (no login required) and advanced commands (login required).</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md160">
+<title>Basic Commands (No login required)</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md161">
+<title>Commit</title>
+<para>Generate smart commit messages using local LLM:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>[-m<sp/>&quot;Optional<sp/>message&quot;]<sp/>[-e]<sp/>[-d]</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-m, --message</computeroutput>: Optional custom commit message</para>
+</listitem><listitem><para><computeroutput>-e, --terminal</computeroutput>: Open editor to modify commit message before committing</para>
+</listitem><listitem><para><computeroutput>-d, --description</computeroutput>: Generate commit message with both title and description (without this flag, only title is generated)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md162">
+<title>Config</title>
+<para>Configure local LLM and JIRA settings:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>[--api-base<sp/>API_URL]<sp/>[--api-key<sp/>API_KEY]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm-web</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>JIRA_URL<sp/>--username<sp/>USERNAME<sp/>--api-token<sp/>TOKEN<sp/>[--verify]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>settings<sp/>through<sp/>web<sp/>interface</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira-web</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md163">
+<title>Advanced Commands (Login required)</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md164">
+<title>Login</title>
+<para>To log in and obtain an API token:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+<para>This command will open a browser window for authentication. After successful login, the API key will be saved locally for future use.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md165">
+<title>Documentation Generation</title>
+<para>Generate documentation for Git diff, files or folders:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>latest<sp/>Git<sp/>commit<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>specific<sp/>file<sp/>or<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>/path/to/file/or/folder</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-l, --location</computeroutput>: Path to specific file or folder for documentation generation (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md166">
+<title>Git Hook Management</title>
+<para>Install or uninstall Git post-commit hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Uninstall<sp/>Git<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>[-l<sp/>/path/to/repo]</highlight></codeline>
+</programlisting></para>
+<para>Options:<itemizedlist>
+<listitem><para><computeroutput>-l, --location</computeroutput>: Path to the Git repository (defaults to current directory)</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md167">
+<title>Authentication</title>
+<para>Penify CLI uses an API token for authentication with advanced features.</para>
+<para>If no token is available and you try to access an advanced feature, you&apos;ll be prompted to log in.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md168">
+<title>Local LLM Configuration</title>
+<para>For commit message generation, Penify can use a local LLM. Configure it using:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>llm<sp/>--model<sp/>MODEL_NAME<sp/>--api-base<sp/>API_URL<sp/>--api-key<sp/>API_KEY</highlight></codeline>
+</programlisting></para>
+<para>Common configurations:<itemizedlist>
+<listitem><para>OpenAI: <computeroutput>--model gpt-3.5-turbo --api-base <ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink> --api-key YOUR_KEY</computeroutput></para>
+</listitem><listitem><para>Anthropic: <computeroutput>--model claude-2 --api-base <ulink url="https://api.anthropic.com">https://api.anthropic.com</ulink> --api-key YOUR_KEY</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md169">
+<title>JIRA Integration</title>
+<para>Configure JIRA integration to enhance commit messages with issue details:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>jira<sp/>--url<sp/>https://your-domain.atlassian.net<sp/>--username<sp/>your-email@example.com<sp/>--api-token<sp/>YOUR_API_TOKEN</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md170">
+<title>Development</title>
+<para>To set up the development environment:</para>
+<para><orderedlist>
+<listitem><para>Clone the repository: <programlisting filename=".bash"><codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/SingularityX-ai/penify-cli.git</highlight></codeline>
+</programlisting></para>
+</listitem><listitem><para>Install the package in editable mode: <programlisting filename=".bash"><codeline><highlight class="normal">pip<sp/>install<sp/>-e<sp/>.</highlight></codeline>
+</programlisting></para>
+</listitem></orderedlist>
+</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md171">
+<title>Running Tests</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">pytest</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md172">
+<title>License</title>
+<para>This project is licensed under the MIT License.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md173">
+<title>Author</title>
+<para>Suman Saurabh (<ulink url="mailto:ss.sumansaurabh92@gmail.com">ss.sumansaurabh92@gmail.com</ulink>)</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md174">
+<title>Contributing</title>
+<para>Contributions are welcome! Please feel free to submit a Pull Request.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md175">
+<title>Issues</title>
+<para>If you encounter any problems or have suggestions, please file an issue on the <ulink url="https://github.com/SingularityX-ai/penify/issues">GitHub repository</ulink>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_README_1autotoc_md176">
+<title>Support</title>
+<para>For automated API Documentation, Architecture Documentation, Code Documentation, Pull Request Documentation, or if you need a demo, please join our <ulink url="https://discord.gg/wqrc8JeV">Discord support channel</ulink>. </para>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/README.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
new file mode 100644
index 0000000..ddb149f
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands.xml
@@ -0,0 +1,172 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands</compoundname>
+    <title>Penify CLI - Commit Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>The <computeroutput>commit</computeroutput> command allows you to generate smart, AI-powered commit messages for your Git changes. This document explains all available options and combinations.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md1">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+<para>By default, this command:<itemizedlist>
+<listitem><para>Analyzes your staged Git changes</para>
+</listitem><listitem><para>Generates a concise commit title only</para>
+</listitem><listitem><para>Uses local LLM if configured, or falls back to Penify API</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md2">
+<title>Command Options</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md3">
+<title>&lt;tt&gt;-m, --message&lt;/tt&gt;</title>
+<para>Provide context for the commit message generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>flow&quot;</highlight></codeline>
+</programlisting></para>
+<para>This hint helps the AI understand your intention and improves the quality of the generated message.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md4">
+<title>&lt;tt&gt;-e, --terminal&lt;/tt&gt;</title>
+<para>Open an editor to review and edit the generated commit message before committing:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-e</highlight></codeline>
+</programlisting></para>
+<para>This opens your default Git editor with the generated message for review.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md5">
+<title>&lt;tt&gt;-d, --description&lt;/tt&gt;</title>
+<para>Generate a detailed commit message with both title and description:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-d</highlight></codeline>
+</programlisting></para>
+<para>Without this flag, only the commit title is generated.</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md6">
+<title>Option Combinations</title>
+<para>You can combine these options for different workflows:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md7">
+<title>Generate Title Only with Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md8">
+<title>Generate Title and Description with Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Update<sp/>login<sp/>UI&quot;<sp/>-d</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md9">
+<title>Generate and Edit Full Commit Message</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-d<sp/>-e</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md10">
+<title>Generate, Edit, and Provide Context</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Refactor<sp/>authentication&quot;<sp/>-d<sp/>-e</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md11">
+<title>LLM and JIRA Integration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md12">
+<title>Using Local LLM</title>
+<para>If you&apos;ve configured a local LLM using <computeroutput>penify config llm</computeroutput>, the commit command will automatically use it for message generation.</para>
+<para>Benefits:<itemizedlist>
+<listitem><para>Privacy: your code changes don&apos;t leave your machine</para>
+</listitem><listitem><para>Speed: no network latency</para>
+</listitem><listitem><para>Works offline</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md13">
+<title>JIRA Enhancement</title>
+<para>If you&apos;ve configured JIRA integration using <computeroutput>penify config jira</computeroutput>, the commit command will:</para>
+<para><orderedlist>
+<listitem><para>Detect JIRA issue references in your changes</para>
+</listitem><listitem><para>Fetch issue details from your JIRA instance</para>
+</listitem><listitem><para>Include issue information in the commit message</para>
+</listitem><listitem><para>Format the commit message according to JIRA&apos;s smart commit format</para>
+</listitem></orderedlist>
+</para>
+<para>Example output: <programlisting><codeline><highlight class="normal">PROJ-123:<sp/>Fix<sp/>authentication<sp/>bug<sp/>in<sp/>login<sp/>flow</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Updated<sp/>OAuth<sp/>token<sp/>validation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Fixed<sp/>session<sp/>timeout<sp/>handling</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Added<sp/>unit<sp/>tests<sp/>for<sp/>edge<sp/>cases</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">[PROJ-123]</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md14">
+<title>Configuration Requirements</title>
+<para>For the <computeroutput>commit</computeroutput> command to work:</para>
+<para><orderedlist>
+<listitem><para>You must have configured either:<itemizedlist>
+<listitem><para>Local LLM via <computeroutput>penify config llm</computeroutput>, OR</para>
+</listitem><listitem><para>Logged in via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>For JIRA enhancement (optional):<itemizedlist>
+<listitem><para>Configure JIRA via <computeroutput>penify config jira</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md15">
+<title>Examples</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md16">
+<title>Basic Commit with Default Settings</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>commit<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Commit<sp/>with<sp/>the<sp/>generated<sp/>message</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>-m<sp/>&quot;Generated<sp/>message<sp/>here&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md17">
+<title>Full Workflow with All Features</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Stage<sp/>your<sp/>changes</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>add<sp/>.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>JIRA<sp/>integration,<sp/></highlight></codeline>
+<codeline><highlight class="normal">#<sp/>provide<sp/>context,<sp/>and<sp/>open<sp/>editor<sp/>for<sp/>review</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fix<sp/>login<sp/>issue&quot;<sp/>-d<sp/>-e</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>The<sp/>commit<sp/>is<sp/>automatically<sp/>completed<sp/>after<sp/>you<sp/>save<sp/>and<sp/>exit<sp/>the<sp/>editor</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md18">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands_1autotoc_md19">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;No LLM model or API token provided&quot;**<itemizedlist>
+<listitem><para>Run <computeroutput>penify config llm</computeroutput> to configure a local LLM, or</para>
+</listitem><listitem><para>Run <computeroutput>penify login</computeroutput> to authenticate with Penify</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem><para>Check your JIRA configuration with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem><para>Verify your network connection</para>
+</listitem><listitem><para>Ensure your JIRA credentials are valid</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Error initializing LLM client&quot;**<itemizedlist>
+<listitem><para>Verify your LLM configuration settings</para>
+</listitem><listitem><para>Ensure the LLM API is accessible </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/commit-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
new file mode 100644
index 0000000..6606065
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands.xml
@@ -0,0 +1,205 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands</compoundname>
+    <title>Penify CLI - Configuration Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>The <computeroutput>config</computeroutput> command allows you to set up and manage configuration settings for Penify CLI. This document explains all available configuration options and how to use them.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md21">
+<title>Configuration Overview</title>
+<para>Penify CLI stores configuration in a JSON file at <computeroutput>~/.penify/config.json</computeroutput>. The configuration includes:</para>
+<para><itemizedlist>
+<listitem><para>LLM (Large Language Model) settings for local commit message generation</para>
+</listitem><listitem><para>JIRA integration settings for enhanced commit messages</para>
+</listitem><listitem><para>API tokens and other credentials</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md22">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Configure<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md23">
+<title>LLM Configuration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md24">
+<title>Web Interface</title>
+<para>Running <computeroutput>penify config llm</computeroutput> opens a web interface in your browser where you can configure:</para>
+<para><orderedlist>
+<listitem><para><bold>Model</bold>: The LLM model to use (e.g., <computeroutput>gpt-3.5-turbo</computeroutput>)</para>
+</listitem><listitem><para><bold>API Base URL</bold>: The endpoint URL for your LLM API (e.g., <computeroutput><ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink></computeroutput>)</para>
+</listitem><listitem><para><bold>API Key</bold>: Your authentication key for the LLM API</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md25">
+<title>Supported LLMs</title>
+<para>Penify CLI supports various LLM providers:</para>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md26">
+<title>OpenAI</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>gpt-3.5-turbo</computeroutput> or <computeroutput>gpt-4</computeroutput></para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="https://api.openai.com/v1">https://api.openai.com/v1</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: Your OpenAI API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md27">
+<title>Anthropic</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>claude-instant-1</computeroutput> or <computeroutput>claude-2</computeroutput></para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="https://api.anthropic.com/v1">https://api.anthropic.com/v1</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: Your Anthropic API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md28">
+<title>Ollama (Local)</title>
+<para><itemizedlist>
+<listitem><para>Model: <computeroutput>llama2</computeroutput> or any model you have installed</para>
+</listitem><listitem><para>API Base: <computeroutput><ulink url="http://localhost:11434">http://localhost:11434</ulink></computeroutput></para>
+</listitem><listitem><para>API Key: (leave blank)</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md29">
+<title>Azure OpenAI</title>
+<para><itemizedlist>
+<listitem><para>Model: Your deployed model name</para>
+</listitem><listitem><para>API Base: Your Azure endpoint</para>
+</listitem><listitem><para>API Key: Your Azure API key</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md30">
+<title>Configuration File Structure</title>
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;model&quot;:<sp/>&quot;gpt-3.5-turbo&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com/v1&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_key&quot;:<sp/>&quot;sk-...&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md31">
+<title>JIRA Configuration</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md32">
+<title>Web Interface</title>
+<para>Running <computeroutput>penify config jira</computeroutput> opens a web interface where you can configure:</para>
+<para><orderedlist>
+<listitem><para><bold>JIRA URL</bold>: Your JIRA instance URL (e.g., <computeroutput><ulink url="https://yourcompany.atlassian.net">https://yourcompany.atlassian.net</ulink></computeroutput>)</para>
+</listitem><listitem><para><bold>Username</bold>: Your JIRA username (typically your email)</para>
+</listitem><listitem><para><bold>API Token</bold>: Your JIRA API token</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md33">
+<title>Creating a JIRA API Token</title>
+<para><orderedlist>
+<listitem><para>Log in to <ulink url="https://id.atlassian.com/manage-profile/security/api-tokens">https://id.atlassian.com/manage-profile/security/api-tokens</ulink></para>
+</listitem><listitem><para>Click &quot;Create API token&quot;</para>
+</listitem><listitem><para>Give it a name (e.g., &quot;Penify CLI&quot;)</para>
+</listitem><listitem><para>Copy the generated token and paste it into the configuration</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md34">
+<title>Configuration File Structure</title>
+<para>After configuration, your <computeroutput>~/.penify/config.json</computeroutput> will contain:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;url&quot;:<sp/>&quot;https://yourcompany.atlassian.net&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;username&quot;:<sp/>&quot;your.email@example.com&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;api_token&quot;:<sp/>&quot;your-jira-api-token&quot;</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md35">
+<title>Configuration Locations</title>
+<para>Penify CLI looks for configuration in multiple locations:</para>
+<para><orderedlist>
+<listitem><para>Project-specific: <computeroutput>.penify/config.json</computeroutput> in the Git repository root</para>
+</listitem><listitem><para>User-specific: <computeroutput>~/.penify/config.json</computeroutput> in your home directory</para>
+</listitem></orderedlist>
+</para>
+<para>The project-specific configuration takes precedence if both exist.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md36">
+<title>Environment Variables</title>
+<para>You can override configuration settings using environment variables:</para>
+<para><itemizedlist>
+<listitem><para><computeroutput>PENIFY_API_TOKEN</computeroutput>: Override the stored API token</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_MODEL</computeroutput>: Override the configured LLM model</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_API_BASE</computeroutput>: Override the configured LLM API base URL</para>
+</listitem><listitem><para><computeroutput>PENIFY_LLM_API_KEY</computeroutput>: Override the configured LLM API key</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_URL</computeroutput>: Override the configured JIRA URL</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_USER</computeroutput>: Override the configured JIRA username</para>
+</listitem><listitem><para><computeroutput>PENIFY_JIRA_TOKEN</computeroutput>: Override the configured JIRA API token</para>
+</listitem></itemizedlist>
+</para>
+<para>Example: <programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_LLM_MODEL=&quot;gpt-4&quot;</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md37">
+<title>Command-Line Configuration</title>
+<para>For advanced users or scripting, you can directly edit the configuration file:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>View<sp/>current<sp/>configuration</highlight></codeline>
+<codeline><highlight class="normal">cat<sp/>~/.penify/config.json</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Edit<sp/>configuration<sp/>with<sp/>your<sp/>preferred<sp/>editor</highlight></codeline>
+<codeline><highlight class="normal">nano<sp/>~/.penify/config.json</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md38">
+<title>Sharing Configuration</title>
+<para>You can share configuration between machines by copying the <computeroutput>.penify/config.json</computeroutput> file. However, be cautious with API keys and credentials.</para>
+<para>For team settings, consider:<orderedlist>
+<listitem><para>Using a project-specific <computeroutput>.penify/config.json</computeroutput> with shared settings</para>
+</listitem><listitem><para>Excluding API keys from shared configuration</para>
+</listitem><listitem><para>Using environment variables for sensitive credentials</para>
+</listitem></orderedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md39">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands_1autotoc_md40">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;Error reading configuration file&quot;**<itemizedlist>
+<listitem><para>Check if the file exists: <computeroutput>ls -la ~/.penify</computeroutput></para>
+</listitem><listitem><para>Ensure it contains valid JSON: <computeroutput>cat ~/.penify/config.json</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to LLM API&quot;**<itemizedlist>
+<listitem><para>Verify API base URL and API key</para>
+</listitem><listitem><para>Check network connectivity to the API endpoint</para>
+</listitem><listitem><para>Ensure your account has access to the specified model</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Failed to connect to JIRA&quot;**<itemizedlist>
+<listitem><para>Check JIRA URL format (should include <computeroutput><ulink url="https://">https://</ulink></computeroutput>)</para>
+</listitem><listitem><para>Verify username and API token</para>
+</listitem><listitem><para>Ensure your JIRA account has API access permissions </para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/config-commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
new file mode 100644
index 0000000..e1fa5b4
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage.xml
@@ -0,0 +1,197 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage</compoundname>
+    <title>Penify CLI - Detailed Usage Guide</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document provides in-depth information about all features and capabilities of the Penify CLI tool.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md42">
+<title>Table of Contents</title>
+<para><itemizedlist>
+<listitem><para>Penify CLI - Detailed Usage Guide<itemizedlist>
+<listitem><para>Table of Contents</para>
+</listitem><listitem><para>Authentication<itemizedlist>
+<listitem><para>Login Process</para>
+</listitem><listitem><para>API Token Storage</para>
+</listitem><listitem><para>Token Precedence</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Command Overview</para>
+</listitem><listitem><para>Commit Message Generation</para>
+</listitem><listitem><para>Code Documentation Generation<itemizedlist>
+<listitem><para>Use Cases</para>
+</listitem><listitem><para>Authentication Requirement</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Configuration Settings</para>
+</listitem><listitem><para>Git Hooks<itemizedlist>
+<listitem><para>Post-Commit Hook</para>
+</listitem><listitem><para>Custom Hook Location</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Advanced Use Cases<itemizedlist>
+<listitem><para>CI/CD Integration</para>
+</listitem><listitem><para>Remote Repository Documentation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Troubleshooting<itemizedlist>
+<listitem><para>Common Issues</para>
+</listitem><listitem><para>Logs</para>
+</listitem><listitem><para>Support</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md43">
+<title>Authentication</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md44">
+<title>Login Process</title>
+<para>When you run <computeroutput>penify login</computeroutput>, the tool:</para>
+<para><orderedlist>
+<listitem><para>Opens your default web browser</para>
+</listitem><listitem><para>Redirects you to Penify&apos;s login page</para>
+</listitem><listitem><para>Captures the authentication token after successful login</para>
+</listitem><listitem><para>Saves the token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md45">
+<title>API Token Storage</title>
+<para>API tokens are stored in your home directory in the <computeroutput>.penify</computeroutput> file. This JSON file contains:</para>
+<para><programlisting filename=".json"><codeline><highlight class="normal">{</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;api_keys&quot;:<sp/>&quot;your-api-token&quot;,</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;llm&quot;:<sp/>{<sp/>&quot;model&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;...&quot;<sp/>},</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>&quot;jira&quot;:<sp/>{<sp/>&quot;url&quot;:<sp/>&quot;...&quot;,<sp/>&quot;username&quot;:<sp/>&quot;...&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;...&quot;<sp/>}</highlight></codeline>
+<codeline><highlight class="normal">}</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md46">
+<title>Token Precedence</title>
+<para><orderedlist>
+<listitem><para>Environment variable <computeroutput>PENIFY_API_TOKEN</computeroutput> (highest priority)</para>
+</listitem><listitem><para>Token in <computeroutput>~/.penify</computeroutput> file</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md47">
+<title>Command Overview</title>
+<para><programlisting><codeline><highlight class="normal">penify</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>commit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>smart<sp/>commit<sp/>messages</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>config<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>and<sp/>JIRA</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>├──<sp/>llm<sp/><sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>local<sp/>LLM<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">│<sp/><sp/><sp/>└──<sp/>jira<sp/><sp/><sp/><sp/><sp/><sp/>Configure<sp/>JIRA<sp/>integration</highlight></codeline>
+<codeline><highlight class="normal">├──<sp/>login<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>account</highlight></codeline>
+<codeline><highlight class="normal">└──<sp/>docgen<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Generate<sp/>code<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>├──<sp/>install-hook<sp/><sp/><sp/><sp/><sp/>Install<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/><sp/><sp/>└──<sp/>uninstall-hook<sp/><sp/><sp/>Remove<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+</programlisting></para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md48">
+<title>Commit Message Generation</title>
+<para>The <computeroutput>commit</computeroutput> command analyzes your staged changes and generates meaningful commit messages. It can:</para>
+<para><itemizedlist>
+<listitem><para>Use a local LLM if configured</para>
+</listitem><listitem><para>Enhance messages with JIRA issue details</para>
+</listitem><listitem><para>Provide both title and description</para>
+</listitem></itemizedlist>
+</para>
+<para>For specific options and examples, see <ref refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_commit_commands" kindref="compound">docs/commit-commands.md</ref>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md49">
+<title>Code Documentation Generation</title>
+<para>The <computeroutput>docgen</computeroutput> command generates documentation for your code:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md50">
+<title>Use Cases</title>
+<para><orderedlist>
+<listitem><para><bold>Current Git Diff</bold>: Default behavior, documents only changed files</para>
+</listitem><listitem><para><bold>Specific File</bold>: Pass a file path with <computeroutput>-l path/to/file.py</computeroutput></para>
+</listitem><listitem><para><bold>Entire Folder</bold>: Pass a folder path with <computeroutput>-l path/to/folder</computeroutput></para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md51">
+<title>Authentication Requirement</title>
+<para>This feature requires authentication with a Penify account. Run <computeroutput>penify login</computeroutput> before using documentation features.</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md52">
+<title>Configuration Settings</title>
+<para>Configure local settings using the <computeroutput>config</computeroutput> command:</para>
+<para><itemizedlist>
+<listitem><para><bold>LLM Settings</bold>: Configure a local LLM for commit message generation</para>
+</listitem><listitem><para><bold>JIRA Settings</bold>: Set up JIRA integration for enhanced commit messages</para>
+</listitem></itemizedlist>
+</para>
+<para>For detailed configuration options, see <ref refid="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_config_commands" kindref="compound">docs/config-commands.md</ref>.</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md53">
+<title>Git Hooks</title>
+<para>Penify can install Git hooks to automate documentation generation:</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md54">
+<title>Post-Commit Hook</title>
+<para><itemizedlist>
+<listitem><para><bold>Install</bold>: <computeroutput>penify docgen install-hook</computeroutput></para>
+</listitem><listitem><para><bold>What it does</bold>: Automatically generates documentation for changed files after each commit</para>
+</listitem><listitem><para><bold>Uninstall</bold>: <computeroutput>penify docgen uninstall-hook</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md55">
+<title>Custom Hook Location</title>
+<para>You can specify a custom location for Git hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/git/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md56">
+<title>Advanced Use Cases</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md57">
+<title>CI/CD Integration</title>
+<para>For CI/CD pipelines:</para>
+<para><orderedlist>
+<listitem><para>Set <computeroutput>PENIFY_API_TOKEN</computeroutput> as an environment variable</para>
+</listitem><listitem><para>Run commands without requiring interactive login</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md58">
+<title>Remote Repository Documentation</title>
+<para>Generate documentation for an entire repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">git<sp/>clone<sp/>https://github.com/user/repo</highlight></codeline>
+<codeline><highlight class="normal">cd<sp/>repo</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md59">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md60">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para><bold>API Key Errors</bold>: Ensure you&apos;ve run <computeroutput>penify login</computeroutput> or set <computeroutput>PENIFY_API_TOKEN</computeroutput></para>
+</listitem><listitem><para><bold>LLM Configuration</bold>: Check your LLM settings with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem><listitem><para><bold>JIRA Integration</bold>: Verify JIRA credentials in your configuration</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md61">
+<title>Logs</title>
+<para>For more detailed logs, you can set the environment variable:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_detailed_usage_1autotoc_md62">
+<title>Support</title>
+<para>For additional help, visit <ulink url="https://docs.penify.dev/">https://docs.penify.dev/</ulink> or contact <ulink url="mailto:support@penify.dev">support@penify.dev</ulink> </para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/detailed-usage.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
new file mode 100644
index 0000000..7107276
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands.xml
@@ -0,0 +1,317 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands</compoundname>
+    <title>Penify CLI - Documentation Generation Commands</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document provides a detailed guide to all permutations and combinations of the <computeroutput>docgen</computeroutput> command, including extensive information about Git hook commands for automating documentation generation.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md64">
+<title>Table of Contents</title>
+<para><itemizedlist>
+<listitem><para>Basic Usage</para>
+</listitem><listitem><para>Command Options</para>
+</listitem><listitem><para>Option Combinations</para>
+</listitem><listitem><para>Git Hook Commands<itemizedlist>
+<listitem><para>Hook Installation</para>
+</listitem><listitem><para>Hook Customization</para>
+</listitem><listitem><para>Hook Uninstallation</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>Advanced Use Cases</para>
+</listitem><listitem><para>Troubleshooting</para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md65">
+<title>Basic Usage</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+<para>By default, this command:<itemizedlist>
+<listitem><para>Analyzes the current Git diff (changes since last commit)</para>
+</listitem><listitem><para>Generates documentation for changed files only</para>
+</listitem><listitem><para>Requires authentication via <computeroutput>penify login</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md66">
+<title>Command Options</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md67">
+<title>&lt;tt&gt;-l, --location&lt;/tt&gt;</title>
+<para>Specify a target for documentation generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/file.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation<sp/>for<sp/>a<sp/>specific<sp/>folder</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>path/to/folder</highlight></codeline>
+</programlisting></para>
+<para>Without this flag, Penify analyzes only Git-tracked modified files.</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md68">
+<title>Subcommands</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md69">
+<title>&lt;tt&gt;install-hook&lt;/tt&gt;</title>
+<para>Install a Git post-commit hook to automatically generate documentation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md70">
+<title>&lt;tt&gt;uninstall-hook&lt;/tt&gt;</title>
+<para>Remove the Git post-commit hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md71">
+<title>Option Combinations</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md72">
+<title>Generate Documentation for Current Git Diff</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Basic<sp/>usage<sp/>-<sp/>current<sp/>Git<sp/>diff</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md73">
+<title>Generate Documentation for a Specific File</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Single<sp/>file<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md74">
+<title>Generate Documentation for a Folder</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Folder<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/models/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md75">
+<title>Install Hook in Current Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md76">
+<title>Install Hook in Specific Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Install<sp/>hook<sp/>in<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md77">
+<title>Uninstall Hook from Current Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>current<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md78">
+<title>Uninstall Hook from Specific Repository</title>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Uninstall<sp/>hook<sp/>from<sp/>a<sp/>specific<sp/>Git<sp/>repository</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md79">
+<title>Git Hook Commands</title>
+<para>Penify provides Git hook commands to automate documentation generation as part of your Git workflow.</para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md80">
+<title>Hook Installation</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md81">
+<title>How Hooks Work</title>
+<para>When you install a Git hook with <computeroutput>penify docgen install-hook</computeroutput>, Penify:</para>
+<para><orderedlist>
+<listitem><para>Creates a post-commit hook script in the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem><para>Makes the script executable</para>
+</listitem><listitem><para>Configures the hook to run <computeroutput>penify docgen</computeroutput> after each commit</para>
+</listitem></orderedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md82">
+<title>Hook Script Content</title>
+<para>The generated post-commit hook contains:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md83">
+<title>Installation Location</title>
+<para>By default, hooks are installed in the current Git repository. You can specify a different location:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md84">
+<title>Installation Requirements</title>
+<para>To install hooks, you need:<itemizedlist>
+<listitem><para>A valid Penify API token (login first with <computeroutput>penify login</computeroutput>)</para>
+</listitem><listitem><para>Write permissions to the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem></itemizedlist>
+</para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md85">
+<title>Verifying Installation</title>
+<para>After installation, you can verify that the hook is installed:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">cat<sp/>.git/hooks/post-commit</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md86">
+<title>Hook Customization</title>
+<para>You can customize the post-commit hook after installation:</para>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md87">
+<title>Modifying Hook Behavior</title>
+<para><orderedlist>
+<listitem><para>Edit the <computeroutput>.git/hooks/post-commit</computeroutput> file</para>
+</listitem><listitem><para>Add additional options to the <computeroutput>penify docgen</computeroutput> command</para>
+</listitem><listitem><para>Add other commands to run after commit</para>
+</listitem></orderedlist>
+</para>
+<para>Example of a customized hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>This<sp/>is<sp/>a<sp/>post-commit<sp/>hook<sp/>generated<sp/>by<sp/>penify.</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Automatically<sp/>generates<sp/>documentation<sp/>for<sp/>changed<sp/>files<sp/>after<sp/>each<sp/>commit.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Additional<sp/>custom<sp/>commands</highlight></codeline>
+<codeline><highlight class="normal">echo<sp/>&quot;Documentation<sp/>generation<sp/>complete!&quot;</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md88">
+<title>Advanced Hook Scenarios</title>
+<para><bold>Conditional Documentation Generation</bold>:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>generate<sp/>documentation<sp/>for<sp/>commits<sp/>to<sp/>the<sp/>main<sp/>branch</highlight></codeline>
+<codeline><highlight class="normal">BRANCH=$(git<sp/>rev-parse<sp/>--abbrev-ref<sp/>HEAD)</highlight></codeline>
+<codeline><highlight class="normal">if<sp/>[<sp/>&quot;$BRANCH&quot;<sp/>=<sp/>&quot;main&quot;<sp/>];<sp/>then</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+<codeline><highlight class="normal">fi</highlight></codeline>
+</programlisting></para>
+<para><bold>Documenting Specific Files/Folders</bold>:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#!/bin/sh</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Only<sp/>document<sp/>Python<sp/>files<sp/>in<sp/>the<sp/>src<sp/>directory</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/<sp/>-gf<sp/>/path/to/git/repository<sp/>-t<sp/>your_api_token</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md89">
+<title>Hook Uninstallation</title>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md90">
+<title>Standard Uninstallation</title>
+<para>To remove a hook from the current repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md91">
+<title>Specific Repository Uninstallation</title>
+<para>To remove a hook from a specific repository:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>-l<sp/>/path/to/repo</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md92">
+<title>Manual Hook Removal</title>
+<para>If needed, you can manually remove the hook:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">rm<sp/>.git/hooks/post-commit</highlight></codeline>
+</programlisting></para>
+</sect3>
+<sect3 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md93">
+<title>Verifying Uninstallation</title>
+<para>Check that the hook was successfully removed:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">ls<sp/>-la<sp/>.git/hooks/post-commit<sp/><sp/>#<sp/>Should<sp/>return<sp/>&quot;No<sp/>such<sp/>file<sp/>or<sp/>directory&quot;</highlight></codeline>
+</programlisting></para>
+</sect3>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md94">
+<title>Advanced Use Cases</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md95">
+<title>Continuous Integration</title>
+<para>Run documentation generation in CI pipelines:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>In<sp/>your<sp/>CI<sp/>script</highlight></codeline>
+<codeline><highlight class="normal">export<sp/>PENIFY_API_TOKEN=your_api_token</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md96">
+<title>Batch Documentation</title>
+<para>Generate documentation for multiple repositories:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Bash<sp/>script<sp/>for<sp/>batch<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">for<sp/>repo<sp/>in<sp/>repo1<sp/>repo2<sp/>repo3;<sp/>do</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>cd<sp/>/path/to/$repo</highlight></codeline>
+<codeline><highlight class="normal"><sp/><sp/>penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+<codeline><highlight class="normal">done</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md97">
+<title>Custom Git Hook Integration</title>
+<para>Integrate with other Git hooks:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>In<sp/>.git/hooks/pre-push</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md98">
+<title>Documenting Release Tags</title>
+<para>Generate documentation when creating a release tag:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Document<sp/>everything<sp/>when<sp/>creating<sp/>a<sp/>tag</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>tag<sp/>-a<sp/>v1.0.0</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.<sp/><sp/>#<sp/>Document<sp/>entire<sp/>codebase</highlight></codeline>
+<codeline><highlight class="normal">git<sp/>commit<sp/>--amend<sp/>-m<sp/>&quot;Release<sp/>v1.0.0<sp/>with<sp/>updated<sp/>documentation&quot;</highlight></codeline>
+</programlisting></para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md99">
+<title>Troubleshooting</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md100">
+<title>Common Issues</title>
+<para><orderedlist>
+<listitem><para>**&quot;Authentication required&quot;**<itemizedlist>
+<listitem><para>Run <computeroutput>penify login</computeroutput> before using documentation features</para>
+</listitem><listitem><para>Check your API token with <computeroutput>cat ~/.penify</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Permission denied when installing hook&quot;**<itemizedlist>
+<listitem><para>Check Git repository permissions</para>
+</listitem><listitem><para>Try running with sudo (if appropriate for your environment)</para>
+</listitem><listitem><para>Ensure the <computeroutput>.git/hooks</computeroutput> directory exists</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Hook installed but not running&quot;**<itemizedlist>
+<listitem><para>Check if the hook is executable: <computeroutput>ls -la .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem><para>Make it executable if needed: <computeroutput>chmod +x .git/hooks/post-commit</computeroutput></para>
+</listitem><listitem><para>Check for syntax errors in the hook script</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;File or directory not found&quot;**<itemizedlist>
+<listitem><para>Verify the path provided to the <computeroutput>-l</computeroutput> option</para>
+</listitem><listitem><para>Ensure you&apos;re running the command from the correct directory</para>
+</listitem></itemizedlist>
+</para>
+</listitem><listitem><para>**&quot;Hook uninstallation failed&quot;**<itemizedlist>
+<listitem><para>Check permissions on the <computeroutput>.git/hooks</computeroutput> directory</para>
+</listitem><listitem><para>Try manual removal: <computeroutput>rm .git/hooks/post-commit</computeroutput></para>
+</listitem></itemizedlist>
+</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md101">
+<title>Debugging</title>
+<para>For detailed output when running documentation commands:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">export<sp/>PENIFY_DEBUG=1</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_doc_commands_1autotoc_md102">
+<title>Getting Help</title>
+<para>For command-specific help:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook<sp/>--help</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook<sp/>--help</highlight></codeline>
+</programlisting> </para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/doc_commands.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
new file mode 100644
index 0000000..2e80f2e
--- /dev/null
+++ b/docs/xml/md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows.xml
@@ -0,0 +1,161 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows" kind="page">
+    <compoundname>md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows</compoundname>
+    <title>Penify CLI Example Workflows</title>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para>This document demonstrates how to use Penify CLI in real-world development workflows to improve your productivity.</para>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md104">
+<title>Workflow 1: Efficient Git Commits with AI</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md105">
+<title>Setup</title>
+<para>First, configure your local LLM for offline operation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+</programlisting></para>
+<para>Configure your JIRA integration for enhanced commit messages:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md106">
+<title>Daily Workflow</title>
+<para><orderedlist>
+<listitem><para>Make your code changes as usual</para>
+</listitem><listitem><para>When ready to commit, use Penify to generate a smart commit message:</para>
+</listitem></orderedlist>
+</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+</programlisting></para>
+<para><orderedlist>
+<listitem><para>Review and confirm the generated commit message</para>
+</listitem><listitem><para>Git commit and push as usual</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md107">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Consistent and descriptive commit messages</para>
+</listitem><listitem><para>Automatic inclusion of relevant JIRA ticket information</para>
+</listitem><listitem><para>Time saved from writing detailed commit messages</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md108">
+<title>Workflow 2: Documentation Generation Pipeline</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md109">
+<title>Setup</title>
+<para>Login to Penify to access advanced documentation features:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+<para>Install the Git hook for automatic documentation generation:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md110">
+<title>Daily Workflow</title>
+<para><orderedlist>
+<listitem><para>Make your code changes as usual</para>
+</listitem><listitem><para>Commit your changes</para>
+</listitem><listitem><para>Documentation is automatically generated for changed files</para>
+</listitem><listitem><para>Review the generated documentation</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md111">
+<title>Manual Documentation</title>
+<para>For specific files or folders:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/authentication</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md112">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Always up-to-date documentation</para>
+</listitem><listitem><para>Consistent documentation style</para>
+</listitem><listitem><para>Time saved from writing detailed documentation</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md113">
+<title>Workflow 3: Code Review Enhancement</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md114">
+<title>Setup</title>
+<para>Ensure you&apos;re logged into Penify:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md115">
+<title>Workflow</title>
+<para><orderedlist>
+<listitem><para>Before submitting a PR, generate documentation for changed files:</para>
+</listitem></orderedlist>
+</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+</programlisting></para>
+<para><orderedlist>
+<listitem><para>Include the generated documentation in your PR</para>
+</listitem><listitem><para>Reviewers can better understand your changes with the AI-generated explanations</para>
+</listitem></orderedlist>
+</para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md116">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Improved PR quality</para>
+</listitem><listitem><para>Faster code reviews</para>
+</listitem><listitem><para>Better team understanding of code changes</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md117">
+<title>Workflow 4: Onboarding New Team Members</title>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md118">
+<title>For Team Leads</title>
+<para>Generate comprehensive documentation for the entire codebase:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>.</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md119">
+<title>For New Team Members</title>
+<para>Generate focused documentation for components you&apos;re working on:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components/my-feature</highlight></codeline>
+</programlisting></para>
+</sect2>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md120">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Faster onboarding</para>
+</listitem><listitem><para>Better understanding of code structure</para>
+</listitem><listitem><para>Reduced questions to senior team members</para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+<sect1 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md121">
+<title>Workflow 5: Legacy Code Understanding</title>
+<para>When working with unfamiliar legacy code:</para>
+<para><programlisting filename=".bash"><codeline><highlight class="normal">#<sp/>Document<sp/>a<sp/>specific<sp/>complex<sp/>file</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/complex_module.py</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">#<sp/>Document<sp/>an<sp/>entire<sp/>legacy<sp/>component</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/legacy/old_component</highlight></codeline>
+</programlisting></para>
+<sect2 id="md__tmp_github_reposRepoArchDocGenContext_Penify_dev_penify_cli_docs_example_workflows_1autotoc_md122">
+<title>Benefits</title>
+<para><itemizedlist>
+<listitem><para>Quickly understand complex legacy systems</para>
+</listitem><listitem><para>Reduce time spent deciphering undocumented code</para>
+</listitem><listitem><para>Make safer changes to legacy systems </para>
+</listitem></itemizedlist>
+</para>
+</sect2>
+</sect1>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/example-workflows.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook.xml b/docs/xml/namespacepenify__hook.xml
new file mode 100644
index 0000000..2d5d9d8
--- /dev/null
+++ b/docs/xml/namespacepenify__hook.xml
@@ -0,0 +1,26 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook" kind="namespace" language="Python">
+    <compoundname>penify_hook</compoundname>
+    <innernamespace refid="namespacepenify__hook_1_1api__client">penify_hook::api_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1base__analyzer">penify_hook::base_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commit__analyzer">penify_hook::commit_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1config__command">penify_hook::config_command</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1constants">penify_hook::constants</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1file__analyzer">penify_hook::file_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1folder__analyzer">penify_hook::folder_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1git__analyzer">penify_hook::git_analyzer</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1jira__client">penify_hook::jira_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1llm__client">penify_hook::llm_client</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1login__command">penify_hook::login_command</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1main">penify_hook::main</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1ui__utils">penify_hook::ui_utils</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1utils">penify_hook::utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1api__client.xml b/docs/xml/namespacepenify__hook_1_1api__client.xml
new file mode 100644
index 0000000..763c4c4
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1api__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1api__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::api_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1api__client_1_1APIClient" prot="public">penify_hook::api_client::APIClient</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/api_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1base__analyzer.xml b/docs/xml/namespacepenify__hook_1_1base__analyzer.xml
new file mode 100644
index 0000000..82a8bc2
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1base__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1base__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::base_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1base__analyzer_1_1BaseAnalyzer" prot="public">penify_hook::base_analyzer::BaseAnalyzer</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/base_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands.xml b/docs/xml/namespacepenify__hook_1_1commands.xml
new file mode 100644
index 0000000..4abe35e
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands</compoundname>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1auth__commands">penify_hook::commands::auth_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1commit__commands">penify_hook::commands::commit_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1config__commands">penify_hook::commands::config_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1doc__commands">penify_hook::commands::doc_commands</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands_1_1hook__commands">penify_hook::commands::hook_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml b/docs/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml
new file mode 100644
index 0000000..305ce09
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands_1_1auth__commands.xml
@@ -0,0 +1,77 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1auth__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::auth_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.auth_commands.save_credentials</definition>
+        <argsstring>(api_key)</argsstring>
+        <name>save_credentials</name>
+        <qualifiedname>penify_hook.commands.auth_commands.save_credentials</qualifiedname>
+        <param>
+          <type>api_key</type>
+          <defname>api_key</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save the API key in a priority-based manner.
+
+This function attempts to save the API key in two locations, based on priority:
+1. In a `.env` file located in the root of the Git repository if one is found.
+2. In a global `.penify` file located in the user&apos;s home directory as a
+fallback.  The function first tries to locate the Git repository using
+`recursive_search_git_folder`. If a Git repository is found, it reads the
+existing `.env` file (if present), updates or adds the API key under the key
+`PENIFY_API_TOKEN`, and writes the updated content back. If any error occurs
+during this process, it falls back to saving the credentials in the global
+`.penify` file. The function handles exceptions and prints appropriate error
+messages.
+
+Args:
+    api_key (str): The API key to save.
+
+Returns:
+    bool: True if the API key is saved successfully, False otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="11" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" bodystart="11" bodyend="89"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" compoundref="auth__commands_8py" startline="90" endline="169">penify_hook.commands.auth_commands.login</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.auth_commands.login</definition>
+        <argsstring>(api_url, dashboard_url)</argsstring>
+        <name>login</name>
+        <qualifiedname>penify_hook.commands.auth_commands.login</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>dashboard_url</type>
+          <defname>dashboard_url</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Open the login page in a web browser and capture the token via redirect.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="90" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" bodystart="90" bodyend="169"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" compoundref="auth__commands_8py" startline="11" endline="89">penify_hook.commands.auth_commands.save_credentials</references>
+        <referencedby refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" compoundref="login__command_8py" startline="6" endline="16">penify_hook.login_command.handle_login</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/auth_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml b/docs/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml
new file mode 100644
index 0000000..c1cfba1
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands_1_1commit__commands.xml
@@ -0,0 +1,154 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1commit__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::commit_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.commit_code</definition>
+        <argsstring>(api_url, token, message, open_terminal, generate_description, llm_model=None, llm_api_base=None, llm_api_key=None, jira_url=None, jira_user=None, jira_api_token=None)</argsstring>
+        <name>commit_code</name>
+        <qualifiedname>penify_hook.commands.commit_commands.commit_code</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <param>
+          <type>open_terminal</type>
+          <defname>open_terminal</defname>
+        </param>
+        <param>
+          <type>generate_description</type>
+          <defname>generate_description</defname>
+        </param>
+        <param>
+          <type>llm_model</type>
+          <defname>llm_model</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>llm_api_base</type>
+          <defname>llm_api_base</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>llm_api_key</type>
+          <defname>llm_api_key</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_url</type>
+          <defname>jira_url</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_user</type>
+          <defname>jira_user</defname>
+          <defval>None</defval>
+        </param>
+        <param>
+          <type>jira_api_token</type>
+          <defname>jira_api_token</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Enhance Git commits with AI-powered commit messages.
+
+This function allows for the generation of enhanced commit messages using
+natural language processing models and optionally integrates with JIRA for
+additional context. It processes the current Git folder to find relevant files
+and generates a detailed commit message based on the provided parameters.
+
+Args:
+    api_url (str): URL of the API endpoint.
+    token (str): Authentication token for the API.
+    message (str): Initial commit message provided by the user.
+    open_terminal (bool): Whether to open the terminal after committing.
+    generate_description (bool): Whether to generate a detailed description in the commit message.
+    llm_model (str?): The language model to use for generating the commit message. Defaults to None.
+    llm_api_base (str?): Base URL of the LLM API. Defaults to None.
+    llm_api_key (str?): API key for accessing the LLM service. Defaults to None.
+    jira_url (str?): URL of the JIRA instance. Defaults to None.
+    jira_user (str?): Username for authenticating with JIRA. Defaults to None.
+    jira_api_token (str?): API token for accessing JIRA. Defaults to None.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="10" bodyend="97"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" compoundref="ui__utils_8py" startline="64" endline="67">penify_hook.ui_utils.print_error</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="60" endline="63">penify_hook.ui_utils.print_warning</references>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" compoundref="test__commit__commands_8py" startline="324" endline="358">tests.test_commit_commands.TestCommitCommands.test_commit_code_error_handling</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" compoundref="test__commit__commands_8py" startline="201" endline="260">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_client</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" compoundref="test__commit__commands_8py" startline="270" endline="317">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_jira_connection_failure</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" compoundref="test__commit__commands_8py" startline="140" endline="190">tests.test_commit_commands.TestCommitCommands.test_commit_code_with_llm_client</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.setup_commit_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_commit_parser</name>
+        <qualifiedname>penify_hook.commands.commit_commands.setup_commit_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Sets up an argument parser for generating smart commit messages.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="98" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="98" bodyend="115"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" compoundref="test__commit__commands_8py" startline="359" endline="382">tests.test_commit_commands.TestCommitCommands.test_setup_commit_parser</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.commit_commands.handle_commit</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_commit</name>
+        <qualifiedname>penify_hook.commands.commit_commands.handle_commit</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle commit functionality by processing arguments and invoking the
+appropriate commands.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="116" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" bodystart="116" bodyend="147"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="256" endline="274">penify_hook.commands.config_commands.get_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+        <referencedby refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" compoundref="test__commit__commands_8py" startline="390" endline="435">tests.test_commit_commands.TestCommitCommands.test_handle_commit</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/commit_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml b/docs/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml
new file mode 100644
index 0000000..aa4819c
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands_1_1config__commands.xml
@@ -0,0 +1,323 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1config__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::config_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1config__commands_1a152642ab83cf6219b604bda6122aba67" prot="public" static="no" mutable="no">
+        <type>bool</type>
+        <definition>bool penify_hook::commands::config_commands::DOTENV_AVAILABLE</definition>
+        <argsstring></argsstring>
+        <name>DOTENV_AVAILABLE</name>
+        <qualifiedname>penify_hook.commands.config_commands.DOTENV_AVAILABLE</qualifiedname>
+        <initializer>=  True</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1config__commands_1a4b202072a3a3b8515c9c254622e9c880" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::commands::config_commands.path</definition>
+        <argsstring></argsstring>
+        <name>path</name>
+        <qualifiedname>penify_hook.commands.config_commands.path</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="286" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="286" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>None</type>
+        <definition> None penify_hook.commands.config_commands.load_env_files</definition>
+        <argsstring>()</argsstring>
+        <name>load_env_files</name>
+        <qualifiedname>penify_hook.commands.config_commands.load_env_files</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Load environment variables from .env files in various locations with proper
+priority.
+
+This function loads environment variables from .env files located in different
+directories, prioritizing the current directory over the Git repo root and the
+user home directory. The loading process ensures that later files override
+earlier ones.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="22" bodyend="62"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</references>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="256" endline="274">penify_hook.commands.config_commands.get_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Path</type>
+        <definition> Path penify_hook.commands.config_commands.get_penify_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_penify_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_penify_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Returns the path to the `config.json` file within the `.penify` directory,
+creating it if necessary.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="66" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="66" bodyend="94"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" compoundref="test__config__commands_8py" startline="22" endline="55">tests.test_config_commands.TestConfigCommands.test_get_penify_config_existing_dir</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" compoundref="test__config__commands_8py" startline="60" endline="94">tests.test_config_commands.TestConfigCommands.test_get_penify_config_new_dir</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Any</type>
+        <definition> Any penify_hook.commands.config_commands.get_env_var_or_default</definition>
+        <argsstring>(str env_var, Any default=None)</argsstring>
+        <name>get_env_var_or_default</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_env_var_or_default</qualifiedname>
+        <param>
+          <type>str</type>
+          <declname>env_var</declname>
+        </param>
+        <param>
+          <type>Any</type>
+          <declname>default</declname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Get environment variable or return default value.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="95" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="95" bodyend="99"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="256" endline="274">penify_hook.commands.config_commands.get_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" compoundref="config__commands_8py" startline="237" endline="255">penify_hook.commands.config_commands.get_llm_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.save_llm_config</definition>
+        <argsstring>(model, api_base, api_key)</argsstring>
+        <name>save_llm_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.save_llm_config</qualifiedname>
+        <param>
+          <type>model</type>
+          <defname>model</defname>
+        </param>
+        <param>
+          <type>api_base</type>
+          <defname>api_base</defname>
+        </param>
+        <param>
+          <type>api_key</type>
+          <defname>api_key</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save LLM configuration settings to an .env file.
+
+This function saves the LLM configuration following a specific priority: 1. Git
+repo root .env (if inside a git repo) 2. User home directory .env  It handles
+the detection of the Git repo root, reads the existing .env content, updates it
+with the new LLM configuration, and writes it back to the file. It also reloads
+the environment variables to make changes immediately available.
+
+Args:
+    model (str): The name of the language model.
+    api_base (str): The base URL for the API.
+    api_key (str): The API key for authentication.
+
+Returns:
+    bool: True if the configuration is saved successfully, False otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="100" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="100" bodyend="166"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="31" endline="87">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" compoundref="test__config__commands_8py" startline="269" endline="300">tests.test_config_commands.TestConfigCommands.test_save_llm_config_failure</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" compoundref="test__config__commands_8py" startline="227" endline="265">tests.test_config_commands.TestConfigCommands.test_save_llm_config_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.save_jira_config</definition>
+        <argsstring>(url, username, api_token)</argsstring>
+        <name>save_jira_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.save_jira_config</qualifiedname>
+        <param>
+          <type>url</type>
+          <defname>url</defname>
+        </param>
+        <param>
+          <type>username</type>
+          <defname>username</defname>
+        </param>
+        <param>
+          <type>api_token</type>
+          <defname>api_token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Save JIRA configuration settings to a .env file.
+
+This function saves JIRA configuration following these steps: 1. Determine the
+target .env file location based on whether the current directory is inside a
+Git repository. 2. If inside a Git repo, use the Git repo root&apos;s .env file;
+otherwise, use the user home directory&apos;s .env file. 3. Read the existing
+content of the .env file (if it exists) to preserve other settings. 4. Update
+the .env content with the new JIRA configuration. 5. Write the updated content
+back to the .env file. 6. Optionally, reload environment variables to make
+changes immediately available.
+
+Args:
+    url (str): The JIRA URL to be saved in the .env file.
+    username (str): The JIRA username to be saved in the .env file.
+    api_token (str): The JIRA API token to be saved in the .env file.
+
+Returns:
+    bool: True if the configuration was successfully saved, False otherwise.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="167" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="167" bodyend="236"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="381" endline="489">penify_hook.commands.config_commands.config_jira_web</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="31" endline="87">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" compoundref="test__config__commands_8py" startline="305" endline="345">tests.test_config_commands.TestConfigCommands.test_save_jira_config_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, str]</type>
+        <definition> Dict[str, str] penify_hook.commands.config_commands.get_llm_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_llm_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_llm_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve LLM configuration from environment variables.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="237" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="237" bodyend="255"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="95" endline="99">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" compoundref="test__config__commands_8py" startline="129" endline="154">tests.test_config_commands.TestConfigCommands.test_get_llm_config_empty</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" compoundref="test__config__commands_8py" startline="97" endline="126">tests.test_config_commands.TestConfigCommands.test_get_llm_config_exists</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" compoundref="test__config__commands_8py" startline="158" endline="185">tests.test_config_commands.TestConfigCommands.test_get_llm_config_invalid_json</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Dict[str, str]</type>
+        <definition> Dict[str, str] penify_hook.commands.config_commands.get_jira_config</definition>
+        <argsstring>()</argsstring>
+        <name>get_jira_config</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_jira_config</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieve JIRA configuration from environment variables.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="256" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="256" bodyend="274"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="95" endline="99">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="381" endline="489">penify_hook.commands.config_commands.config_jira_web</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" compoundref="test__config__commands_8py" startline="188" endline="222">tests.test_config_commands.TestConfigCommands.test_get_jira_config_exists</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.config_llm_web</definition>
+        <argsstring>()</argsstring>
+        <name>config_llm_web</name>
+        <qualifiedname>penify_hook.commands.config_commands.config_llm_web</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Starts an HTTP server for configuring LLM settings via a web interface.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="275" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="275" bodyend="380"/>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="31" endline="87">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" compoundref="test__web__config_8py" startline="18" endline="55">tests.test_web_config.TestWebConfig.test_config_llm_web_server_setup</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.config_commands.config_jira_web</definition>
+        <argsstring>()</argsstring>
+        <name>config_jira_web</name>
+        <qualifiedname>penify_hook.commands.config_commands.config_jira_web</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Starts a web server for configuring JIRA settings.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="381" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="381" bodyend="489"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" compoundref="config__commands_8py" startline="256" endline="274">penify_hook.commands.config_commands.get_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="167" endline="236">penify_hook.commands.config_commands.save_jira_config</references>
+        <referencedby refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="31" endline="87">penify_hook.config_command.handle_config</referencedby>
+        <referencedby refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" compoundref="test__web__config_8py" startline="59" endline="95">tests.test_web_config.TestWebConfig.test_config_jira_web_server_setup</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>Optional[str]</type>
+        <definition> Optional[str] penify_hook.commands.config_commands.get_token</definition>
+        <argsstring>()</argsstring>
+        <name>get_token</name>
+        <qualifiedname>penify_hook.commands.config_commands.get_token</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Retrieves an API token using a prioritized method.
+
+This function first attempts to load environment variables from all `.env`
+files and checks if the `PENIFY_API_TOKEN` environment variable is set. If
+found, it returns the token. If not, it looks for the API key in a
+configuration file named &apos;api_keys&apos;. If both methods fail, it returns None.
+
+Returns:
+    str or None: The API token if found, otherwise None.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="490" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" bodystart="490" bodyend="521"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a3caf2b062dd33b1f1d7ddc7224f0ff87" compoundref="config__commands_8py" startline="95" endline="99">penify_hook.commands.config_commands.get_env_var_or_default</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="66" endline="94">penify_hook.commands.config_commands.get_penify_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" compoundref="test__config__commands_8py" startline="378" endline="409">tests.test_config_commands.TestConfigCommands.test_get_token_from_config</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" compoundref="test__config__commands_8py" startline="349" endline="374">tests.test_config_commands.TestConfigCommands.test_get_token_from_env</referencedby>
+        <referencedby refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" compoundref="test__config__commands_8py" startline="413" endline="450">tests.test_config_commands.TestConfigCommands.test_get_token_not_found</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/config_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml b/docs/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml
new file mode 100644
index 0000000..ae5fad7
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands_1_1doc__commands.xml
@@ -0,0 +1,134 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1doc__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::doc_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a3e42540047da37565afffeaf106cb948" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::doc_commands.docgen_description</definition>
+        <argsstring></argsstring>
+        <name>docgen_description</name>
+        <qualifiedname>penify_hook.commands.doc_commands.docgen_description</qualifiedname>
+        <initializer>=  &quot;&quot;&quot;Generate code documentation using Penify.
+
+This command requires you to be logged in to your Penify account.
+You can generate documentation for:
+- Current Git diff (default)
+- Specific file
+- Specific folder
+&quot;&quot;&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="73" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="73" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.generate_doc</definition>
+        <argsstring>(api_url, token, location=None)</argsstring>
+        <name>generate_doc</name>
+        <qualifiedname>penify_hook.commands.doc_commands.generate_doc</qualifiedname>
+        <param>
+          <type>api_url</type>
+          <defname>api_url</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+          <defval>None</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generates documentation based on the given parameters.
+
+This function initializes an API client using the provided API URL and token.
+It then generates documentation by analyzing the specified location, which can
+be a folder, a file, or the current working directory if no location is
+provided. The function handles different types of analysis based on the input
+location and reports any errors encountered during the process.
+
+Args:
+    api_url (str): The URL of the API to connect to for documentation generation.
+    token (str): The authentication token for accessing the API.
+    location (str?): The path to a specific file or folder to analyze. If not provided,
+        the current working directory is used.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="8" bodyend="72"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" compoundref="test__doc__commands_8py" startline="136" endline="168">tests.test_doc_commands.test_generate_doc_error_handling</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" compoundref="test__doc__commands_8py" startline="63" endline="99">tests.test_doc_commands.test_generate_doc_file_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" compoundref="test__doc__commands_8py" startline="101" endline="135">tests.test_doc_commands.test_generate_doc_folder_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" compoundref="test__doc__commands_8py" startline="23" endline="61">tests.test_doc_commands.test_generate_doc_no_location</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" compoundref="test__doc__commands_8py" startline="313" endline="335">tests.test_doc_commands.test_generate_doc_with_file_exception</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" compoundref="test__doc__commands_8py" startline="336" endline="358">tests.test_doc_commands.test_generate_doc_with_folder_exception</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.setup_docgen_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_docgen_parser</name>
+        <qualifiedname>penify_hook.commands.doc_commands.setup_docgen_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Configure a parser for generating documentation using Git commands.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="82" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="82" bodyend="113"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" compoundref="test__doc__commands_8py" startline="169" endline="199">tests.test_doc_commands.test_setup_docgen_parser</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.doc_commands.handle_docgen</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_docgen</name>
+        <qualifiedname>penify_hook.commands.doc_commands.handle_docgen</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle document generation and hook management based on subcommands.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="114" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" bodystart="114" bodyend="137"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" compoundref="config__commands_8py" startline="490" endline="521">penify_hook.commands.config_commands.get_token</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" compoundref="hook__commands_8py" startline="12" endline="27">penify_hook.commands.hook_commands.install_git_hook</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" compoundref="hook__commands_8py" startline="28" endline="37">penify_hook.commands.hook_commands.uninstall_git_hook</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" compoundref="test__doc__commands_8py" startline="264" endline="290">tests.test_doc_commands.test_handle_docgen_generate</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" compoundref="test__doc__commands_8py" startline="201" endline="232">tests.test_doc_commands.test_handle_docgen_install_hook</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" compoundref="test__doc__commands_8py" startline="291" endline="312">tests.test_doc_commands.test_handle_docgen_no_token</referencedby>
+        <referencedby refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" compoundref="test__doc__commands_8py" startline="234" endline="262">tests.test_doc_commands.test_handle_docgen_uninstall_hook</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/doc_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml b/docs/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml
new file mode 100644
index 0000000..403fdd6
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commands_1_1hook__commands.xml
@@ -0,0 +1,94 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commands_1_1hook__commands" kind="namespace" language="Python">
+    <compoundname>penify_hook::commands::hook_commands</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1hook__commands_1ae82fd46e5a9219da1478b0476b8214b1" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::hook_commands.HOOK_FILENAME</definition>
+        <argsstring></argsstring>
+        <name>HOOK_FILENAME</name>
+        <qualifiedname>penify_hook.commands.hook_commands.HOOK_FILENAME</qualifiedname>
+        <initializer>=  &quot;post-commit&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="4" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1commands_1_1hook__commands_1a6a45aad71c8d32ce11a6dff8cee8bee7" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::commands::hook_commands.HOOK_TEMPLATE</definition>
+        <argsstring></argsstring>
+        <name>HOOK_TEMPLATE</name>
+        <qualifiedname>penify_hook.commands.hook_commands.HOOK_TEMPLATE</qualifiedname>
+        <initializer>=  &quot;&quot;&quot;#!/bin/sh
+# This is a post-commit hook generated by penify.
+# Automatically generates documentation for changed files after each commit.
+
+penify docgen -gf {git_folder_path} -t {token}
+&quot;&quot;&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="5" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="5" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1hook__commands_1adff8f5d3bf1c3795974a391ee95b72b2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.hook_commands.install_git_hook</definition>
+        <argsstring>(location, token)</argsstring>
+        <name>install_git_hook</name>
+        <qualifiedname>penify_hook.commands.hook_commands.install_git_hook</qualifiedname>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+        </param>
+        <param>
+          <type>token</type>
+          <defname>token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Install a post-commit Git hook that generates documentation for changed files.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="12" bodyend="27"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1commands_1_1hook__commands_1a81543eb5fa835fd1237f24e8bce6201d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.commands.hook_commands.uninstall_git_hook</definition>
+        <argsstring>(location)</argsstring>
+        <name>uninstall_git_hook</name>
+        <qualifiedname>penify_hook.commands.hook_commands.uninstall_git_hook</qualifiedname>
+        <param>
+          <type>location</type>
+          <defname>location</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Uninstalls the post-commit hook from the specified location.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="28" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" bodystart="28" bodyend="37"/>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/hook_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1commit__analyzer.xml b/docs/xml/namespacepenify__hook_1_1commit__analyzer.xml
new file mode 100644
index 0000000..34e3580
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1commit__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1commit__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::commit_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook" prot="public">penify_hook::commit_analyzer::CommitDocGenHook</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commit_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1config__command.xml b/docs/xml/namespacepenify__hook_1_1config__command.xml
new file mode 100644
index 0000000..c3cf5a8
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1config__command.xml
@@ -0,0 +1,67 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1config__command" kind="namespace" language="Python">
+    <compoundname>penify_hook::config_command</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.config_command.setup_config_parser</definition>
+        <argsstring>(parent_parser)</argsstring>
+        <name>setup_config_parser</name>
+        <qualifiedname>penify_hook.config_command.setup_config_parser</qualifiedname>
+        <param>
+          <type>parent_parser</type>
+          <defname>parent_parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up configuration parsers with subcommands for LLM and JIRA settings.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" bodystart="4" bodyend="30"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.config_command.handle_config</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_config</name>
+        <qualifiedname>penify_hook.config_command.handle_config</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Handle configuration settings based on the specified config type.
+
+This function processes different types of configurations such as LLM (Language
+Model) and JIRA. It saves configurations, sets up web-based configurations, and
+verifies JIRA connections. Depending on the `args.config_type`, it imports
+necessary modules, handles configuration saving or setup, and optionally
+verifies JIRA connectivity.
+
+Args:
+    args (argparse.Namespace): Command-line arguments containing the type of configuration to handle.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="31" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" bodystart="31" bodyend="87"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" compoundref="config__commands_8py" startline="381" endline="489">penify_hook.commands.config_commands.config_jira_web</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" compoundref="config__commands_8py" startline="275" endline="380">penify_hook.commands.config_commands.config_llm_web</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="167" endline="236">penify_hook.commands.config_commands.save_jira_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="100" endline="166">penify_hook.commands.config_commands.save_llm_config</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/config_command.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1constants.xml b/docs/xml/namespacepenify__hook_1_1constants.xml
new file mode 100644
index 0000000..1aafdc4
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1constants.xml
@@ -0,0 +1,43 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1constants" kind="namespace" language="Python">
+    <compoundname>penify_hook::constants</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1constants_1af198b5d1fc2f44657a2061aa324af3e0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::constants.API_URL</definition>
+        <argsstring></argsstring>
+        <name>API_URL</name>
+        <qualifiedname>penify_hook.constants.API_URL</qualifiedname>
+        <initializer>=  &apos;http://localhost:8000/api&apos;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="1" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" bodystart="1" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1constants_1a316c5a606e4440fb8224c6544c3a15f0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::constants.DASHBOARD_URL</definition>
+        <argsstring></argsstring>
+        <name>DASHBOARD_URL</name>
+        <qualifiedname>penify_hook.constants.DASHBOARD_URL</qualifiedname>
+        <initializer>=  &quot;https://dashboard.penify.dev/auth/localhost/login&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="2" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" bodystart="2" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/constants.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1file__analyzer.xml b/docs/xml/namespacepenify__hook_1_1file__analyzer.xml
new file mode 100644
index 0000000..1588f44
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1file__analyzer.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1file__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::file_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook" prot="public">penify_hook::file_analyzer::FileAnalyzerGenHook</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1file__analyzer_1af419a4965f079d58cac5a5281ddb1828" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::file_analyzer.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.file_analyzer.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" bodystart="18" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/file_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1folder__analyzer.xml b/docs/xml/namespacepenify__hook_1_1folder__analyzer.xml
new file mode 100644
index 0000000..f75cafb
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1folder__analyzer.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1folder__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::folder_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1folder__analyzer_1_1FolderAnalyzerGenHook" prot="public">penify_hook::folder_analyzer::FolderAnalyzerGenHook</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/folder_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1git__analyzer.xml b/docs/xml/namespacepenify__hook_1_1git__analyzer.xml
new file mode 100644
index 0000000..9b156cc
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1git__analyzer.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1git__analyzer" kind="namespace" language="Python">
+    <compoundname>penify_hook::git_analyzer</compoundname>
+    <innerclass refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook" prot="public">penify_hook::git_analyzer::GitDocGenHook</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1git__analyzer_1ac4ce143fdca789a79c66852c37d7363a" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::git_analyzer.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.git_analyzer.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/git_analyzer.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1jira__client.xml b/docs/xml/namespacepenify__hook_1_1jira__client.xml
new file mode 100644
index 0000000..dbbe0fc
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1jira__client.xml
@@ -0,0 +1,29 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1jira__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::jira_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1jira__client_1_1JiraClient" prot="public">penify_hook::jira_client::JiraClient</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1jira__client_1a5593ea3415081eca1eea92e4c1ad1aa2" prot="public" static="no" mutable="no">
+        <type>bool</type>
+        <definition>bool penify_hook::jira_client::JIRA_AVAILABLE</definition>
+        <argsstring></argsstring>
+        <name>JIRA_AVAILABLE</name>
+        <qualifiedname>penify_hook.jira_client.JIRA_AVAILABLE</qualifiedname>
+        <initializer>=  True</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="8" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" bodystart="8" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/jira_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1llm__client.xml b/docs/xml/namespacepenify__hook_1_1llm__client.xml
new file mode 100644
index 0000000..5748cf6
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1llm__client.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1llm__client" kind="namespace" language="Python">
+    <compoundname>penify_hook::llm_client</compoundname>
+    <innerclass refid="classpenify__hook_1_1llm__client_1_1LLMClient" prot="public">penify_hook::llm_client::LLMClient</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/llm_client.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1login__command.xml b/docs/xml/namespacepenify__hook_1_1login__command.xml
new file mode 100644
index 0000000..462f74b
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1login__command.xml
@@ -0,0 +1,55 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1login__command" kind="namespace" language="Python">
+    <compoundname>penify_hook::login_command</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.login_command.setup_login_parser</definition>
+        <argsstring>(parser)</argsstring>
+        <name>setup_login_parser</name>
+        <qualifiedname>penify_hook.login_command.setup_login_parser</qualifiedname>
+        <param>
+          <type>parser</type>
+          <defname>parser</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Set up command-line arguments for login.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="1" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" bodystart="1" bodyend="5"/>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.login_command.handle_login</definition>
+        <argsstring>(args)</argsstring>
+        <name>handle_login</name>
+        <qualifiedname>penify_hook.login_command.handle_login</qualifiedname>
+        <param>
+          <type>args</type>
+          <defname>args</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Initiates a user login process using predefined constants and the `login`
+function.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" bodystart="6" bodyend="16"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1auth__commands_1a78f375c58bb6f69f98675e6a9ac84655" compoundref="auth__commands_8py" startline="90" endline="169">penify_hook.commands.auth_commands.login</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/login_command.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1main.xml b/docs/xml/namespacepenify__hook_1_1main.xml
new file mode 100644
index 0000000..63c3c74
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1main.xml
@@ -0,0 +1,47 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1main" kind="namespace" language="Python">
+    <compoundname>penify_hook::main</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.main.main</definition>
+        <argsstring>()</argsstring>
+        <name>main</name>
+        <qualifiedname>penify_hook.main.main</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Main function to handle command-line interface (CLI) interactions with Penify
+services.
+
+This tool provides a command-line interface for generating smart commit
+messages, configuring local-LLM and JIRA, and generating code documentation. It
+supports basic commands that do not require login and advanced commands that
+require user authentication. The `--version` flag can be used to display the
+version information.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" bodystart="6" bodyend="84"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</references>
+        <references refid="namespacepenify__hook_1_1config__command_1a240e5331681eb574ac319d7458783bde" compoundref="config__command_8py" startline="31" endline="87">penify_hook.config_command.handle_config</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</references>
+        <references refid="namespacepenify__hook_1_1login__command_1ae4bf932fbafeff834b0a0c5a37f74ccd" compoundref="login__command_8py" startline="6" endline="16">penify_hook.login_command.handle_login</references>
+        <references refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</references>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" compoundref="commit__commands_8py" startline="98" endline="115">penify_hook.commands.commit_commands.setup_commit_parser</references>
+        <references refid="namespacepenify__hook_1_1config__command_1a4f3eb92164a69df1446d745f8a09285e" compoundref="config__command_8py" startline="4" endline="30">penify_hook.config_command.setup_config_parser</references>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" compoundref="doc__commands_8py" startline="82" endline="113">penify_hook.commands.doc_commands.setup_docgen_parser</references>
+        <references refid="namespacepenify__hook_1_1login__command_1aae63db4c484797bead34b7d874020c6a" compoundref="login__command_8py" startline="1" endline="5">penify_hook.login_command.setup_login_parser</references>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/main.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1ui__utils.xml b/docs/xml/namespacepenify__hook_1_1ui__utils.xml
new file mode 100644
index 0000000..443bfc7
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1ui__utils.xml
@@ -0,0 +1,529 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1ui__utils" kind="namespace" language="Python">
+    <compoundname>penify_hook::ui_utils</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.autoreset</definition>
+        <argsstring></argsstring>
+        <name>autoreset</name>
+        <qualifiedname>penify_hook.ui_utils.autoreset</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="12" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="12" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.INFO_COLOR</definition>
+        <argsstring></argsstring>
+        <name>INFO_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.INFO_COLOR</qualifiedname>
+        <initializer>=  Fore.CYAN</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="15" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.SUCCESS_COLOR</definition>
+        <argsstring></argsstring>
+        <name>SUCCESS_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.SUCCESS_COLOR</qualifiedname>
+        <initializer>=  Fore.GREEN</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="16" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="16" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.WARNING_COLOR</definition>
+        <argsstring></argsstring>
+        <name>WARNING_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.WARNING_COLOR</qualifiedname>
+        <initializer>=  Fore.YELLOW</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="17" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="17" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.ERROR_COLOR</definition>
+        <argsstring></argsstring>
+        <name>ERROR_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.ERROR_COLOR</qualifiedname>
+        <initializer>=  Fore.RED</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="18" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="18" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.HIGHLIGHT_COLOR</definition>
+        <argsstring></argsstring>
+        <name>HIGHLIGHT_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.HIGHLIGHT_COLOR</qualifiedname>
+        <initializer>=  Fore.BLUE</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="19" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="19" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::ui_utils.NEUTRAL_COLOR</definition>
+        <argsstring></argsstring>
+        <name>NEUTRAL_COLOR</name>
+        <qualifiedname>penify_hook.ui_utils.NEUTRAL_COLOR</qualifiedname>
+        <initializer>=  Fore.WHITE</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="20" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.SUCCESS_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>SUCCESS_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.SUCCESS_SYMBOL</qualifiedname>
+        <initializer>=  &quot;✓&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="23" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.WARNING_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>WARNING_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.WARNING_SYMBOL</qualifiedname>
+        <initializer>=  &quot;○&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="24" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="24" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.ERROR_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>ERROR_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.ERROR_SYMBOL</qualifiedname>
+        <initializer>=  &quot;✗&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="25" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756" prot="public" static="no" mutable="no">
+        <type>string</type>
+        <definition>string penify_hook::ui_utils.PROCESSING_SYMBOL</definition>
+        <argsstring></argsstring>
+        <name>PROCESSING_SYMBOL</name>
+        <qualifiedname>penify_hook.ui_utils.PROCESSING_SYMBOL</qualifiedname>
+        <initializer>=  &quot;⟳&quot;</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_info</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_info</name>
+        <qualifiedname>penify_hook.ui_utils.format_info</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format an informational message with appropriate color.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="28" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="28" bodyend="31"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" compoundref="ui__utils_8py" startline="84" endline="93">penify_hook.ui_utils.create_progress_bar</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" compoundref="ui__utils_8py" startline="94" endline="104">penify_hook.ui_utils.create_stage_progress_bar</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" compoundref="ui__utils_8py" startline="52" endline="55">penify_hook.ui_utils.print_info</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_success</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_success</name>
+        <qualifiedname>penify_hook.ui_utils.format_success</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Formats a success message with green color and reset style.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="32" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="32" bodyend="35"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" compoundref="ui__utils_8py" startline="56" endline="59">penify_hook.ui_utils.print_success</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_warning</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_warning</name>
+        <qualifiedname>penify_hook.ui_utils.format_warning</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a warning message with appropriate color.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="36" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="36" bodyend="39"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" compoundref="ui__utils_8py" startline="60" endline="63">penify_hook.ui_utils.print_warning</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_error</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_error</name>
+        <qualifiedname>penify_hook.ui_utils.format_error</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format an error message with the specified error color.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="40" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="40" bodyend="43"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" compoundref="ui__utils_8py" startline="64" endline="67">penify_hook.ui_utils.print_error</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_highlight</definition>
+        <argsstring>(message)</argsstring>
+        <name>format_highlight</name>
+        <qualifiedname>penify_hook.ui_utils.format_highlight</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a highlighted message with appropriate color.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="44" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="44" bodyend="47"/>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.format_file_path</definition>
+        <argsstring>(file_path)</argsstring>
+        <name>format_file_path</name>
+        <qualifiedname>penify_hook.ui_utils.format_file_path</qualifiedname>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Format a file path with a warning color.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="48" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="48" bodyend="51"/>
+        <referencedby refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" compoundref="ui__utils_8py" startline="68" endline="72">penify_hook.ui_utils.print_processing</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a6ab39391dfb7686f2a2d21a702dd3073" compoundref="file__analyzer_8py" startline="101" endline="105">penify_hook.file_analyzer.FileAnalyzerGenHook.print_processing</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_info</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_info</name>
+        <qualifiedname>penify_hook.ui_utils.print_info</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Prints an informational message with formatting.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="52" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="52" bodyend="55"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="31">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="classpenify__hook_1_1jira__client_1_1JiraClient_1a093d6456fe053ef7a7862d5d6851910c" compoundref="jira__client_8py" startline="50" endline="58">penify_hook.jira_client.JiraClient.extract_issue_keys_from_branch</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a8496194276441fa2eb2fa014eaab9a37" compoundref="commit__analyzer_8py" startline="21" endline="65">penify_hook.commit_analyzer.CommitDocGenHook.get_summary</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" compoundref="commit__commands_8py" startline="116" endline="147">penify_hook.commands.commit_commands.handle_commit</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1main_1a16838b20df4bd14ee4b5e1dd2906738f" compoundref="main_8py" startline="6" endline="84">penify_hook.main.main</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="103" endline="157">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_success</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_success</name>
+        <qualifiedname>penify_hook.ui_utils.print_success</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Prints a formatted success message.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="56" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="56" bodyend="59"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" compoundref="ui__utils_8py" startline="32" endline="35">penify_hook.ui_utils.format_success</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1a6370a03f7ed9175ef6f81e931a105ea9" compoundref="commit__analyzer_8py" startline="66" endline="102">penify_hook.commit_analyzer.CommitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_warning</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_warning</name>
+        <qualifiedname>penify_hook.ui_utils.print_warning</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Prints a warning message with formatted output.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="60" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="60" bodyend="63"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" compoundref="ui__utils_8py" startline="36" endline="39">penify_hook.ui_utils.format_warning</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="100">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1commit__analyzer_1_1CommitDocGenHook_1adda13cc121d96342476ccf72b63a007f" compoundref="commit__analyzer_8py" startline="103" endline="157">penify_hook.commit_analyzer.CommitDocGenHook.process_jira_integration</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_error</definition>
+        <argsstring>(message)</argsstring>
+        <name>print_error</name>
+        <qualifiedname>penify_hook.ui_utils.print_error</qualifiedname>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print an error message with appropriate formatting.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="64" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="64" bodyend="67"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" compoundref="ui__utils_8py" startline="40" endline="43">penify_hook.ui_utils.format_error</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_processing</definition>
+        <argsstring>(file_path)</argsstring>
+        <name>print_processing</name>
+        <qualifiedname>penify_hook.ui_utils.print_processing</qualifiedname>
+        <param>
+          <type>file_path</type>
+          <defname>file_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a processing message for a specified file.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="68" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="68" bodyend="72"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" compoundref="ui__utils_8py" startline="48" endline="51">penify_hook.ui_utils.format_file_path</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.print_status</definition>
+        <argsstring>(status, message)</argsstring>
+        <name>print_status</name>
+        <qualifiedname>penify_hook.ui_utils.print_status</qualifiedname>
+        <param>
+          <type>status</type>
+          <defname>status</defname>
+        </param>
+        <param>
+          <type>message</type>
+          <defname>message</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Print a status message with an appropriate symbol.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="73" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="73" bodyend="83"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.create_progress_bar</definition>
+        <argsstring>(total, desc=&quot;Processing&quot;, unit=&quot;item&quot;)</argsstring>
+        <name>create_progress_bar</name>
+        <qualifiedname>penify_hook.ui_utils.create_progress_bar</qualifiedname>
+        <param>
+          <type>total</type>
+          <defname>total</defname>
+        </param>
+        <param>
+          <type>desc</type>
+          <defname>desc</defname>
+          <defval>&quot;Processing&quot;</defval>
+        </param>
+        <param>
+          <type>unit</type>
+          <defname>unit</defname>
+          <defval>&quot;item&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a tqdm progress bar with consistent styling.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="84" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="84" bodyend="93"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="31">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="classpenify__hook_1_1git__analyzer_1_1GitDocGenHook_1a3beba14e92d717391a74bb70b1fab0ae" compoundref="git__analyzer_8py" startline="134" endline="178">penify_hook.git_analyzer.GitDocGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.create_stage_progress_bar</definition>
+        <argsstring>(stages, desc=&quot;Processing&quot;)</argsstring>
+        <name>create_stage_progress_bar</name>
+        <qualifiedname>penify_hook.ui_utils.create_stage_progress_bar</qualifiedname>
+        <param>
+          <type>stages</type>
+          <defname>stages</defname>
+        </param>
+        <param>
+          <type>desc</type>
+          <defname>desc</defname>
+          <defval>&quot;Processing&quot;</defval>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Create a tqdm progress bar for processing stages with consistent styling.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="94" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="94" bodyend="104"/>
+        <references refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" compoundref="ui__utils_8py" startline="28" endline="31">penify_hook.ui_utils.format_info</references>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.ui_utils.update_stage</definition>
+        <argsstring>(pbar, stage_name)</argsstring>
+        <name>update_stage</name>
+        <qualifiedname>penify_hook.ui_utils.update_stage</qualifiedname>
+        <param>
+          <type>pbar</type>
+          <defname>pbar</defname>
+        </param>
+        <param>
+          <type>stage_name</type>
+          <defname>stage_name</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Update the progress bar with a new stage name.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="105" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" bodystart="105" bodyend="111"/>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a2cc6c22ef588fccf3eed9bbc57fb6d6e" compoundref="file__analyzer_8py" startline="27" endline="100">penify_hook.file_analyzer.FileAnalyzerGenHook.process_file</referencedby>
+        <referencedby refid="classpenify__hook_1_1file__analyzer_1_1FileAnalyzerGenHook_1a4f4dffbc432fac3e259d957dd1e187f1" compoundref="file__analyzer_8py" startline="106" endline="155">penify_hook.file_analyzer.FileAnalyzerGenHook.run</referencedby>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+<para><verbatim>UI utilities for Penify CLI.
+
+This module provides utility functions for consistent UI formatting,
+colored output, and progress indicators across the Penify CLI application.
+</verbatim> </para>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacepenify__hook_1_1utils.xml b/docs/xml/namespacepenify__hook_1_1utils.xml
new file mode 100644
index 0000000..5746b88
--- /dev/null
+++ b/docs/xml/namespacepenify__hook_1_1utils.xml
@@ -0,0 +1,113 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacepenify__hook_1_1utils" kind="namespace" language="Python">
+    <compoundname>penify_hook::utils</compoundname>
+    <innerclass refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public">penify_hook::utils::GitRepoNotFoundError</innerclass>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>penify_hook::utils.logger</definition>
+        <argsstring></argsstring>
+        <name>logger</name>
+        <qualifiedname>penify_hook.utils.logger</qualifiedname>
+        <initializer>=  logging.getLogger(__name__)</initializer>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="6" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.get_repo_details</definition>
+        <argsstring>(Repo repo)</argsstring>
+        <name>get_repo_details</name>
+        <qualifiedname>penify_hook.utils.get_repo_details</qualifiedname>
+        <param>
+          <type>Repo</type>
+          <declname>repo</declname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Determine the details of a repository including its remote URL, hosting
+service, organization name, and repository name.
+
+This function extracts the remote URL from the given Git repository object and
+determines the hosting service (e.g., GitHub, Azure DevOps, Bitbucket, GitLab).
+It then parses the URL to extract the organization name and repository name. If
+the URL does not match any known hosting service pattern, it sets the hosting
+service as &quot;Unknown&quot;. The function handles exceptions that may occur during
+this process and logs an error message if needed.
+
+Args:
+    repo (Repo): A GitPython Repo object representing the local git repository.
+
+Returns:
+    dict: A dictionary containing the organization name, repository name, and hosting
+        service.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="13" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="13" bodyend="77"/>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.recursive_search_git_folder</definition>
+        <argsstring>(folder_path)</argsstring>
+        <name>recursive_search_git_folder</name>
+        <qualifiedname>penify_hook.utils.recursive_search_git_folder</qualifiedname>
+        <param>
+          <type>folder_path</type>
+          <defname>folder_path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Recursively searches for a .git folder starting from the given directory.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="78" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="78" bodyend="88"/>
+        <references refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</references>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" compoundref="commit__commands_8py" startline="10" endline="97">penify_hook.commands.commit_commands.commit_code</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" compoundref="config__commands_8py" startline="66" endline="94">penify_hook.commands.config_commands.get_penify_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1aabe277132ce0bc0aacef951cf1dee2ae" compoundref="config__commands_8py" startline="22" endline="62">penify_hook.commands.config_commands.load_env_files</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" compoundref="utils_8py" startline="78" endline="88">penify_hook.utils.recursive_search_git_folder</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1auth__commands_1aa3956ca1749d4218ea1dc6e5b6218b24" compoundref="auth__commands_8py" startline="11" endline="89">penify_hook.commands.auth_commands.save_credentials</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" compoundref="config__commands_8py" startline="167" endline="236">penify_hook.commands.config_commands.save_jira_config</referencedby>
+        <referencedby refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" compoundref="config__commands_8py" startline="100" endline="166">penify_hook.commands.config_commands.save_llm_config</referencedby>
+      </memberdef>
+      <memberdef kind="function" id="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def penify_hook.utils.find_git_parent</definition>
+        <argsstring>(path)</argsstring>
+        <name>find_git_parent</name>
+        <qualifiedname>penify_hook.utils.find_git_parent</qualifiedname>
+        <param>
+          <type>path</type>
+          <defname>path</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Traverse up from the given path to find the nearest directory containing a .git
+subdirectory.</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="89" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" bodystart="89" bodyend="101"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacesetup.xml b/docs/xml/namespacesetup.xml
new file mode 100644
index 0000000..9527ed9
--- /dev/null
+++ b/docs/xml/namespacesetup.xml
@@ -0,0 +1,195 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacesetup" kind="namespace" language="Python">
+    <compoundname>setup</compoundname>
+      <sectiondef kind="var">
+      <memberdef kind="variable" id="namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.name</definition>
+        <argsstring></argsstring>
+        <name>name</name>
+        <qualifiedname>setup.name</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="4" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="4" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a2aa722b36a933088812b50ea79b97a5c" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.version</definition>
+        <argsstring></argsstring>
+        <name>version</name>
+        <qualifiedname>setup.version</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="5" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="5" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aff2375a361fd5865c77bd9aa093be747" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.packages</definition>
+        <argsstring></argsstring>
+        <name>packages</name>
+        <qualifiedname>setup.packages</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="6" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="6" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1abead4f26b530856f858f0d44c7cf2588" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.install_requires</definition>
+        <argsstring></argsstring>
+        <name>install_requires</name>
+        <qualifiedname>setup.install_requires</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="7" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="7" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1ada7058afc98897f073d3f3b8b9157059" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.entry_points</definition>
+        <argsstring></argsstring>
+        <name>entry_points</name>
+        <qualifiedname>setup.entry_points</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="15" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="15" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a3a57a4772d418a06835249cbade0d86a" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.author</definition>
+        <argsstring></argsstring>
+        <name>author</name>
+        <qualifiedname>setup.author</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="20" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="20" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a5b08034343aa2be607722a8b315f3625" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.author_email</definition>
+        <argsstring></argsstring>
+        <name>author_email</name>
+        <qualifiedname>setup.author_email</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="21" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aedf461ec52a946bda975938ba0b93ec0" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.description</definition>
+        <argsstring></argsstring>
+        <name>description</name>
+        <qualifiedname>setup.description</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="22" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="22" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.long_description</definition>
+        <argsstring></argsstring>
+        <name>long_description</name>
+        <qualifiedname>setup.long_description</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="23" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="23" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1a3796ea10c998699d07d391414ff5d720" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.long_description_content_type</definition>
+        <argsstring></argsstring>
+        <name>long_description_content_type</name>
+        <qualifiedname>setup.long_description_content_type</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="24" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="24" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.url</definition>
+        <argsstring></argsstring>
+        <name>url</name>
+        <qualifiedname>setup.url</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="25" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="25" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.classifiers</definition>
+        <argsstring></argsstring>
+        <name>classifiers</name>
+        <qualifiedname>setup.classifiers</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="26" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="26" bodyend="-1"/>
+      </memberdef>
+      <memberdef kind="variable" id="namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf" prot="public" static="no" mutable="no">
+        <type></type>
+        <definition>setup.python_requires</definition>
+        <argsstring></argsstring>
+        <name>python_requires</name>
+        <qualifiedname>setup.python_requires</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="31" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" bodystart="31" bodyend="-1"/>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacestd.xml b/docs/xml/namespacestd.xml
new file mode 100644
index 0000000..0f0343b
--- /dev/null
+++ b/docs/xml/namespacestd.xml
@@ -0,0 +1,110 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacestd" kind="namespace" language="Unknown">
+    <compoundname>std</compoundname>
+    <innerclass refid="classstd_1_1allocator" prot="public">std::allocator</innerclass>
+    <innerclass refid="classstd_1_1array" prot="public">std::array</innerclass>
+    <innerclass refid="classstd_1_1atomic" prot="public">std::atomic</innerclass>
+    <innerclass refid="classstd_1_1atomic__ref" prot="public">std::atomic_ref</innerclass>
+    <innerclass refid="classstd_1_1auto__ptr" prot="public">std::auto_ptr</innerclass>
+    <innerclass refid="classstd_1_1bad__alloc" prot="public">std::bad_alloc</innerclass>
+    <innerclass refid="classstd_1_1bad__cast" prot="public">std::bad_cast</innerclass>
+    <innerclass refid="classstd_1_1bad__exception" prot="public">std::bad_exception</innerclass>
+    <innerclass refid="classstd_1_1bad__typeid" prot="public">std::bad_typeid</innerclass>
+    <innerclass refid="classstd_1_1basic__fstream" prot="public">std::basic_fstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ifstream" prot="public">std::basic_ifstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ios" prot="public">std::basic_ios</innerclass>
+    <innerclass refid="classstd_1_1basic__iostream" prot="public">std::basic_iostream</innerclass>
+    <innerclass refid="classstd_1_1basic__istream" prot="public">std::basic_istream</innerclass>
+    <innerclass refid="classstd_1_1basic__istringstream" prot="public">std::basic_istringstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ofstream" prot="public">std::basic_ofstream</innerclass>
+    <innerclass refid="classstd_1_1basic__ostream" prot="public">std::basic_ostream</innerclass>
+    <innerclass refid="classstd_1_1basic__ostringstream" prot="public">std::basic_ostringstream</innerclass>
+    <innerclass refid="classstd_1_1basic__string" prot="public">std::basic_string</innerclass>
+    <innerclass refid="classstd_1_1basic__string__view" prot="public">std::basic_string_view</innerclass>
+    <innerclass refid="classstd_1_1basic__stringstream" prot="public">std::basic_stringstream</innerclass>
+    <innerclass refid="classstd_1_1bitset" prot="public">std::bitset</innerclass>
+    <innerclass refid="classstd_1_1complex" prot="public">std::complex</innerclass>
+    <innerclass refid="classstd_1_1deque" prot="public">std::deque</innerclass>
+    <innerclass refid="classstd_1_1domain__error" prot="public">std::domain_error</innerclass>
+    <innerclass refid="classstd_1_1error__category" prot="public">std::error_category</innerclass>
+    <innerclass refid="classstd_1_1error__code" prot="public">std::error_code</innerclass>
+    <innerclass refid="classstd_1_1error__condition" prot="public">std::error_condition</innerclass>
+    <innerclass refid="classstd_1_1exception" prot="public">std::exception</innerclass>
+    <innerclass refid="classstd_1_1forward__list" prot="public">std::forward_list</innerclass>
+    <innerclass refid="classstd_1_1fstream" prot="public">std::fstream</innerclass>
+    <innerclass refid="classstd_1_1ifstream" prot="public">std::ifstream</innerclass>
+    <innerclass refid="classstd_1_1invalid__argument" prot="public">std::invalid_argument</innerclass>
+    <innerclass refid="classstd_1_1ios" prot="public">std::ios</innerclass>
+    <innerclass refid="classstd_1_1ios__base" prot="public">std::ios_base</innerclass>
+    <innerclass refid="classstd_1_1istream" prot="public">std::istream</innerclass>
+    <innerclass refid="classstd_1_1istringstream" prot="public">std::istringstream</innerclass>
+    <innerclass refid="classstd_1_1jthread" prot="public">std::jthread</innerclass>
+    <innerclass refid="classstd_1_1length__error" prot="public">std::length_error</innerclass>
+    <innerclass refid="classstd_1_1list" prot="public">std::list</innerclass>
+    <innerclass refid="classstd_1_1lock__guard" prot="public">std::lock_guard</innerclass>
+    <innerclass refid="classstd_1_1logic__error" prot="public">std::logic_error</innerclass>
+    <innerclass refid="classstd_1_1map" prot="public">std::map</innerclass>
+    <innerclass refid="classstd_1_1multimap" prot="public">std::multimap</innerclass>
+    <innerclass refid="classstd_1_1multiset" prot="public">std::multiset</innerclass>
+    <innerclass refid="classstd_1_1mutex" prot="public">std::mutex</innerclass>
+    <innerclass refid="classstd_1_1ofstream" prot="public">std::ofstream</innerclass>
+    <innerclass refid="classstd_1_1ostream" prot="public">std::ostream</innerclass>
+    <innerclass refid="classstd_1_1ostringstream" prot="public">std::ostringstream</innerclass>
+    <innerclass refid="classstd_1_1out__of__range" prot="public">std::out_of_range</innerclass>
+    <innerclass refid="classstd_1_1overflow__error" prot="public">std::overflow_error</innerclass>
+    <innerclass refid="classstd_1_1priority__queue" prot="public">std::priority_queue</innerclass>
+    <innerclass refid="classstd_1_1queue" prot="public">std::queue</innerclass>
+    <innerclass refid="classstd_1_1range__error" prot="public">std::range_error</innerclass>
+    <innerclass refid="classstd_1_1recursive__mutex" prot="public">std::recursive_mutex</innerclass>
+    <innerclass refid="classstd_1_1recursive__timed__mutex" prot="public">std::recursive_timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1runtime__error" prot="public">std::runtime_error</innerclass>
+    <innerclass refid="classstd_1_1set" prot="public">std::set</innerclass>
+    <innerclass refid="classstd_1_1shared__lock" prot="public">std::shared_lock</innerclass>
+    <innerclass refid="classstd_1_1shared__mutex" prot="public">std::shared_mutex</innerclass>
+    <innerclass refid="classstd_1_1shared__ptr" prot="public">std::shared_ptr</innerclass>
+    <innerclass refid="classstd_1_1shared__timed__mutex" prot="public">std::shared_timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1smart__ptr" prot="public">std::smart_ptr</innerclass>
+    <innerclass refid="classstd_1_1span" prot="public">std::span</innerclass>
+    <innerclass refid="classstd_1_1stack" prot="public">std::stack</innerclass>
+    <innerclass refid="classstd_1_1string" prot="public">std::string</innerclass>
+    <innerclass refid="classstd_1_1string__view" prot="public">std::string_view</innerclass>
+    <innerclass refid="classstd_1_1stringstream" prot="public">std::stringstream</innerclass>
+    <innerclass refid="classstd_1_1system__error" prot="public">std::system_error</innerclass>
+    <innerclass refid="classstd_1_1thread" prot="public">std::thread</innerclass>
+    <innerclass refid="classstd_1_1timed__mutex" prot="public">std::timed_mutex</innerclass>
+    <innerclass refid="classstd_1_1u16string" prot="public">std::u16string</innerclass>
+    <innerclass refid="classstd_1_1u16string__view" prot="public">std::u16string_view</innerclass>
+    <innerclass refid="classstd_1_1u32string" prot="public">std::u32string</innerclass>
+    <innerclass refid="classstd_1_1u32string__view" prot="public">std::u32string_view</innerclass>
+    <innerclass refid="classstd_1_1u8string" prot="public">std::u8string</innerclass>
+    <innerclass refid="classstd_1_1u8string__view" prot="public">std::u8string_view</innerclass>
+    <innerclass refid="classstd_1_1underflow__error" prot="public">std::underflow_error</innerclass>
+    <innerclass refid="classstd_1_1unique__lock" prot="public">std::unique_lock</innerclass>
+    <innerclass refid="classstd_1_1unique__ptr" prot="public">std::unique_ptr</innerclass>
+    <innerclass refid="classstd_1_1unordered__map" prot="public">std::unordered_map</innerclass>
+    <innerclass refid="classstd_1_1unordered__multimap" prot="public">std::unordered_multimap</innerclass>
+    <innerclass refid="classstd_1_1unordered__multiset" prot="public">std::unordered_multiset</innerclass>
+    <innerclass refid="classstd_1_1unordered__set" prot="public">std::unordered_set</innerclass>
+    <innerclass refid="classstd_1_1valarray" prot="public">std::valarray</innerclass>
+    <innerclass refid="classstd_1_1vector" prot="public">std::vector</innerclass>
+    <innerclass refid="classstd_1_1weak__ptr" prot="public">std::weak_ptr</innerclass>
+    <innerclass refid="classstd_1_1wfstream" prot="public">std::wfstream</innerclass>
+    <innerclass refid="classstd_1_1wifstream" prot="public">std::wifstream</innerclass>
+    <innerclass refid="classstd_1_1wios" prot="public">std::wios</innerclass>
+    <innerclass refid="classstd_1_1wistream" prot="public">std::wistream</innerclass>
+    <innerclass refid="classstd_1_1wistringstream" prot="public">std::wistringstream</innerclass>
+    <innerclass refid="classstd_1_1wofstream" prot="public">std::wofstream</innerclass>
+    <innerclass refid="classstd_1_1wostream" prot="public">std::wostream</innerclass>
+    <innerclass refid="classstd_1_1wostringstream" prot="public">std::wostringstream</innerclass>
+    <innerclass refid="classstd_1_1wstring" prot="public">std::wstring</innerclass>
+    <innerclass refid="classstd_1_1wstring__view" prot="public">std::wstring_view</innerclass>
+    <innerclass refid="classstd_1_1wstringstream" prot="public">std::wstringstream</innerclass>
+    <briefdescription>
+<para>STL namespace. </para>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="[STL]" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests.xml b/docs/xml/namespacetests.xml
new file mode 100644
index 0000000..3b5005f
--- /dev/null
+++ b/docs/xml/namespacetests.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests" kind="namespace" language="Python">
+    <compoundname>tests</compoundname>
+    <innernamespace refid="namespacetests_1_1conftest">tests::conftest</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__commit__commands">tests::test_commit_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__config__commands">tests::test_config_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__doc__commands">tests::test_doc_commands</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__web__config">tests::test_web_config</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests_1_1conftest.xml b/docs/xml/namespacetests_1_1conftest.xml
new file mode 100644
index 0000000..9d124cb
--- /dev/null
+++ b/docs/xml/namespacetests_1_1conftest.xml
@@ -0,0 +1,11 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1conftest" kind="namespace" language="Python">
+    <compoundname>tests::conftest</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/conftest.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests_1_1test__commit__commands.xml b/docs/xml/namespacetests_1_1test__commit__commands.xml
new file mode 100644
index 0000000..b7c5e1f
--- /dev/null
+++ b/docs/xml/namespacetests_1_1test__commit__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__commit__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_commit_commands</compoundname>
+    <innerclass refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" prot="public">tests::test_commit_commands::TestCommitCommands</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests_1_1test__config__commands.xml b/docs/xml/namespacetests_1_1test__config__commands.xml
new file mode 100644
index 0000000..9443c08
--- /dev/null
+++ b/docs/xml/namespacetests_1_1test__config__commands.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__config__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_config_commands</compoundname>
+    <innerclass refid="classtests_1_1test__config__commands_1_1TestConfigCommands" prot="public">tests::test_config_commands::TestConfigCommands</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests_1_1test__doc__commands.xml b/docs/xml/namespacetests_1_1test__doc__commands.xml
new file mode 100644
index 0000000..04a2685
--- /dev/null
+++ b/docs/xml/namespacetests_1_1test__doc__commands.xml
@@ -0,0 +1,461 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__doc__commands" kind="namespace" language="Python">
+    <compoundname>tests::test_doc_commands</compoundname>
+      <sectiondef kind="func">
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_no_location</definition>
+        <argsstring>(mock_getcwd, mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_no_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_no_location</qualifiedname>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test function to generate documentation without location information.
+
+This function sets up mocks for the API client, current working
+directory, and Git analyzer. It then calls the `generate_doc` function
+with a fake API URL and token. The function is expected to initialize
+the API client, configure the Git analyzer, and run it without any
+location information.
+
+Args:
+    mock_getcwd (MagicMock): Mock for os.getcwd().
+    mock_api_client (MagicMock): Mock for creating an API client.
+    mock_folder_analyzer (MagicMock): Mock for folder analysis.
+    mock_file_analyzer (MagicMock): Mock for file analysis.
+    mock_git_analyzer (MagicMock): Mock for Git analyzer setup.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="21" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="23" bodyend="61"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_file_location</definition>
+        <argsstring>(mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_file_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_file_location</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test generating a documentation file location.
+
+This function tests the process of generating a documentation file
+location using mock objects for API client, folder analyzer, file
+analyzer, and Git analyzer. It sets up the necessary mocks, calls the
+`generate_doc` function with specified parameters, and asserts that the
+appropriate methods on the mock objects are called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="62" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="63" bodyend="99"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_folder_location</definition>
+        <argsstring>(mock_api_client, mock_folder_analyzer, mock_file_analyzer, mock_git_analyzer)</argsstring>
+        <name>test_generate_doc_folder_location</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_folder_location</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_folder_analyzer</type>
+          <defname>mock_folder_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_file_analyzer</type>
+          <defname>mock_file_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the function to generate documentation for a folder location.
+
+It sets up mock objects for API client, folder analyzer, file analyzer,
+and Git analyzer, then calls the `generate_doc` function with specified
+parameters. Finally, it asserts that the correct methods on the mock
+objects were called as expected.
+
+Args:
+    mock_api_client (MagicMock): Mock object for the API client.
+    mock_folder_analyzer (MagicMock): Mock object for the folder analyzer.
+    mock_file_analyzer (MagicMock): Mock object for the file analyzer.
+    mock_git_analyzer (MagicMock): Mock object for the Git analyzer.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="100" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="101" bodyend="135"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_error_handling</definition>
+        <argsstring>(mock_api_client, mock_git_analyzer, mock_exit)</argsstring>
+        <name>test_generate_doc_error_handling</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_error_handling</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_git_analyzer</type>
+          <defname>mock_git_analyzer</defname>
+        </param>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate a documentation string for the provided code snippet using
+Google Docstring style.
+
+Short one line description: Test function to ensure proper error
+handling during API calls with GitAnalyzer.  Multiline long description:
+This test function is designed to verify that the generate_doc function
+handles exceptions correctly when an error occurs during API interaction
+with GitAnalyzer. It sets up a mock API client and a mock Git analyzer,
+causing the analyzer to raise an exception to simulate a failure
+condition. The function then asserts that the exit code is set to 1 when
+the error handling mechanism is invoked.
+
+Args:
+    mock_api_client (MagicMock): A mock object simulating the API client.
+    mock_git_analyzer (MagicMock): A mock object simulating the Git analyzer, configured to raise an
+        exception.
+    mock_exit (MagicMock): A mock object representing the exit function, which should be called
+        with an error code.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="136" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="136" bodyend="168"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_setup_docgen_parser</definition>
+        <argsstring>()</argsstring>
+        <name>test_setup_docgen_parser</name>
+        <qualifiedname>tests.test_doc_commands.test_setup_docgen_parser</qualifiedname>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the setup_docgen_parser function to ensure it properly configures
+the ArgumentParser for docgen options.
+
+It verifies that the parser correctly sets up docgen options and handles
+different subcommands like &apos;install-hook&apos; and &apos;uninstall-hook&apos;.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="169" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="169" bodyend="199"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" compoundref="doc__commands_8py" startline="82" endline="113">penify_hook.commands.doc_commands.setup_docgen_parser</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_install_hook</definition>
+        <argsstring>(mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_install_hook</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_install_hook</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the handling of the &apos;install-hook&apos; subcommand.
+
+This function sets up a mock environment where it simulates the
+execution of the &apos;install-hook&apos; subcommand. It verifies that the
+`mock_install_hook` is called with the correct arguments, while
+`mock_generate_doc` and `mock_uninstall_hook` are not called.
+
+Args:
+    mock_exit (MagicMock): Mock object for sys.exit.
+    mock_get_token (MagicMock): Mock object to simulate fetching a token.
+    mock_generate_doc (MagicMock): Mock object to simulate generating documentation.
+    mock_uninstall_hook (MagicMock): Mock object to simulate uninstalling a hook.
+    mock_install_hook (MagicMock): Mock object to simulate installing a hook.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="200" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="201" bodyend="232"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_uninstall_hook</definition>
+        <argsstring>(mock_exit, mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_uninstall_hook</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_uninstall_hook</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the uninstall-hook subcommand of the handle_docgen function.
+This test case sets up a mock environment and verifies that the
+uninstall-hook is called with the correct location, while generate_doc
+and install_hook are not called.
+
+Args:
+    mock_exit (MagicMock): A mock for the exit function.
+    mock_get_token (MagicMock): A mock for the get_token function.
+    mock_generate_doc (MagicMock): A mock for the generate_doc function.
+    mock_uninstall_hook (MagicMock): A mock for the uninstall_hook function.
+    mock_install_hook (MagicMock): A mock for the install_hook function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="233" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="234" bodyend="262"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_generate</definition>
+        <argsstring>(mock_get_token, mock_generate_doc, mock_uninstall_hook, mock_install_hook)</argsstring>
+        <name>test_handle_docgen_generate</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_generate</qualifiedname>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <param>
+          <type>mock_generate_doc</type>
+          <defname>mock_generate_doc</defname>
+        </param>
+        <param>
+          <type>mock_uninstall_hook</type>
+          <defname>mock_uninstall_hook</defname>
+        </param>
+        <param>
+          <type>mock_install_hook</type>
+          <defname>mock_install_hook</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the direct documentation generation functionality.
+
+This function tests the `handle_docgen` function when no subcommand is
+provided. It verifies that the document generation hook is called and
+the uninstall and install hooks are not called.
+
+Args:
+    mock_get_token (MagicMock): Mocked function to get authentication token.
+    mock_generate_doc (MagicMock): Mocked function for generating documentation.
+    mock_uninstall_hook (MagicMock): Mocked function for uninstalling the document generation hook.
+    mock_install_hook (MagicMock): Mocked function for installing the document generation hook.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="263" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="264" bodyend="290"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_handle_docgen_no_token</definition>
+        <argsstring>(mock_exit, mock_get_token)</argsstring>
+        <name>test_handle_docgen_no_token</name>
+        <qualifiedname>tests.test_doc_commands.test_handle_docgen_no_token</qualifiedname>
+        <param>
+          <type>mock_exit</type>
+          <defname>mock_exit</defname>
+        </param>
+        <param>
+          <type>mock_get_token</type>
+          <defname>mock_get_token</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Test the behavior of the `handle_docgen` function when no token is
+provided.
+
+This function asserts that if no token is returned by `mock_get_token`,
+the `handle_docgen` function will call `mock_exit` with a status code of
+1.
+
+Args:
+    mock_exit (MagicMock): A MagicMock object simulating the `exit` function.
+    mock_get_token (MagicMock): A MagicMock object simulating the `get_token` function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="291" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="291" bodyend="312"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" compoundref="doc__commands_8py" startline="114" endline="137">penify_hook.commands.doc_commands.handle_docgen</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_with_file_exception</definition>
+        <argsstring>(mock_api_client, mock_getcwd)</argsstring>
+        <name>test_generate_doc_with_file_exception</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_with_file_exception</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate documentation from a Python source file.
+
+This function reads a Python file and generates a docstring based on its
+content. It uses mock objects to simulate API calls and directory
+operations during testing.
+
+Args:
+    mock_api_client (unittest.mock.MagicMock): A mock object for simulating API client behavior.
+    mock_getcwd (unittest.mock.MagicMock): A mock object for simulating the current working directory function.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="313" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="313" bodyend="335"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      <memberdef kind="function" id="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
+        <type>def</type>
+        <definition>def tests.test_doc_commands.test_generate_doc_with_folder_exception</definition>
+        <argsstring>(mock_api_client, mock_getcwd)</argsstring>
+        <name>test_generate_doc_with_folder_exception</name>
+        <qualifiedname>tests.test_doc_commands.test_generate_doc_with_folder_exception</qualifiedname>
+        <param>
+          <type>mock_api_client</type>
+          <defname>mock_api_client</defname>
+        </param>
+        <param>
+          <type>mock_getcwd</type>
+          <defname>mock_getcwd</defname>
+        </param>
+        <briefdescription>
+        </briefdescription>
+        <detaileddescription>
+<para><verbatim>Generate documentation from a given API endpoint and save it to a
+folder.
+
+This function fetches data from the specified API endpoint, processes
+it, and saves the generated documentation in the provided folder. If an
+error occurs during the fetching process, a SystemExit exception is
+raised with an appropriate message.
+
+Args:
+    api_url (str): The URL of the API endpoint from which data will be fetched.
+    token (str): The authentication token required to access the API.
+    folder_path (str): The path to the folder where the documentation will be saved.
+</verbatim> </para>
+        </detaileddescription>
+        <inbodydescription>
+        </inbodydescription>
+        <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="336" column="1" bodyfile="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" bodystart="336" bodyend="358"/>
+        <references refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" compoundref="doc__commands_8py" startline="8" endline="72">penify_hook.commands.doc_commands.generate_doc</references>
+      </memberdef>
+      </sectiondef>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/namespacetests_1_1test__web__config.xml b/docs/xml/namespacetests_1_1test__web__config.xml
new file mode 100644
index 0000000..d68b4d9
--- /dev/null
+++ b/docs/xml/namespacetests_1_1test__web__config.xml
@@ -0,0 +1,12 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="namespacetests_1_1test__web__config" kind="namespace" language="Python">
+    <compoundname>tests::test_web_config</compoundname>
+    <innerclass refid="classtests_1_1test__web__config_1_1TestWebConfig" prot="public">tests::test_web_config::TestWebConfig</innerclass>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py" line="1" column="1"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/penify-cli-documentation_8md.xml b/docs/xml/penify-cli-documentation_8md.xml
new file mode 100644
index 0000000..83e4922
--- /dev/null
+++ b/docs/xml/penify-cli-documentation_8md.xml
@@ -0,0 +1,220 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify-cli-documentation_8md" kind="file" language="Markdown">
+    <compoundname>penify-cli-documentation.md</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline><highlight class="normal">layout:<sp/>doc</highlight></codeline>
+<codeline><highlight class="normal">title:<sp/>Streamline<sp/>Git<sp/>Commits<sp/>and<sp/>Code<sp/>Documentation<sp/>with<sp/>Penify-CLI&apos;s<sp/>Automated<sp/>Generation</highlight></codeline>
+<codeline><highlight class="normal">description:<sp/>Discover<sp/>how<sp/>Penify-CLI<sp/>automates<sp/>both<sp/>Git<sp/>commit<sp/>messages<sp/>and<sp/>code<sp/>documentation,<sp/>with<sp/>Jira<sp/>integration<sp/>and<sp/>flexible<sp/>options.<sp/>Save<sp/>time,<sp/>improve<sp/>repository<sp/>clarity,<sp/>and<sp/>boost<sp/>productivity<sp/>with<sp/>this<sp/>detailed<sp/>guide<sp/>to<sp/>usage<sp/>and<sp/>best<sp/>practices.</highlight></codeline>
+<codeline><highlight class="normal">keywords:<sp/>Penify-CLI,<sp/>Git<sp/>commit<sp/>messages,<sp/>code<sp/>documentation,<sp/>Jira<sp/>integration,<sp/>automated<sp/>documentation,<sp/>version<sp/>control,<sp/>repository<sp/>management,<sp/>developer<sp/>productivity</highlight></codeline>
+<codeline><highlight class="normal">author:<sp/>Suman<sp/>Sauarbh</highlight></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline><highlight class="normal">#<sp/>Penify<sp/>CLI<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>is<sp/>a<sp/>powerful<sp/>tool<sp/>for<sp/>enhancing<sp/>your<sp/>development<sp/>workflow<sp/>with<sp/>AI-powered<sp/>features<sp/>like<sp/>commit<sp/>message<sp/>generation,<sp/>code<sp/>documentation,<sp/>and<sp/>JIRA<sp/>integration.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Installation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">pip<sp/>install<sp/>penify</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Getting<sp/>Started</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">After<sp/>installation,<sp/>you<sp/>can<sp/>check<sp/>the<sp/>version<sp/>of<sp/>Penify<sp/>CLI:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>--version</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Commands<sp/>Overview</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`commit`:<sp/>Generate<sp/>smart<sp/>commit<sp/>messages<sp/>using<sp/>local-LLM</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`config`:<sp/>Configure<sp/>local-LLM<sp/>and<sp/>JIRA<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`login`:<sp/>Log<sp/>in<sp/>to<sp/>Penify<sp/>to<sp/>use<sp/>advanced<sp/>features</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`docgen`:<sp/>Generate<sp/>code<sp/>documentation<sp/>for<sp/>Git<sp/>diffs,<sp/>files,<sp/>or<sp/>folders</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Detailed<sp/>Command<sp/>Documentation</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Commit<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`commit`<sp/>command<sp/>generates<sp/>intelligent<sp/>commit<sp/>messages<sp/>using<sp/>local<sp/>LLM<sp/>models<sp/>or<sp/>Penify<sp/>services.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>[options]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Options:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`-m,<sp/>--message<sp/>TEXT`:<sp/>Provide<sp/>context<sp/>for<sp/>the<sp/>commit<sp/>message<sp/>generation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-e,<sp/>--terminal`:<sp/>Open<sp/>an<sp/>editor<sp/>to<sp/>modify<sp/>the<sp/>generated<sp/>commit<sp/>message<sp/>before<sp/>applying<sp/>it</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`-d,<sp/>--description`:<sp/>Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>with<sp/>both<sp/>title<sp/>and<sp/>description</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Basic<sp/>usage:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Provide<sp/>context<sp/>for<sp/>better<sp/>results:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-m<sp/>&quot;Fixed<sp/>the<sp/>login<sp/>button&quot;</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Generate<sp/>a<sp/>detailed<sp/>commit<sp/>message<sp/>and<sp/>open<sp/>editor:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>commit<sp/>-e<sp/>-d</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Requirements:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Either<sp/>a<sp/>local<sp/>LLM<sp/>configuration<sp/>(via<sp/>`penify<sp/>config<sp/>llm`)<sp/>or<sp/>Penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>For<sp/>JIRA<sp/>integration,<sp/>configure<sp/>JIRA<sp/>settings<sp/>(via<sp/>`penify<sp/>config<sp/>jira`)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Config<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`config`<sp/>command<sp/>helps<sp/>you<sp/>configure<sp/>local<sp/>LLM<sp/>settings<sp/>and<sp/>JIRA<sp/>integration<sp/>for<sp/>enhanced<sp/>commit<sp/>messages.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>[subcommand]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Subcommands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`llm`:<sp/>Configure<sp/>local<sp/>Large<sp/>Language<sp/>Model<sp/>settings</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`jira`:<sp/>Configure<sp/>JIRA<sp/>integration<sp/>settings</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Configure<sp/>local<sp/>LLM:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>llm</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>to<sp/>configure:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Model<sp/>name<sp/>(e.g.,<sp/>gpt-3.5-turbo,<sp/>llama2)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>base<sp/>URL<sp/>(e.g.,<sp/>https://api.openai.com/v1)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>key</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Configure<sp/>JIRA<sp/>integration:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>config<sp/>jira</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline><highlight class="normal">This<sp/>opens<sp/>a<sp/>web<sp/>interface<sp/>to<sp/>configure:</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>JIRA<sp/>URL<sp/>(e.g.,<sp/>https://your-domain.atlassian.net)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Username<sp/>(typically<sp/>your<sp/>email)</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>API<sp/>token</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Login<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`login`<sp/>command<sp/>authenticates<sp/>you<sp/>with<sp/>Penify<sp/>for<sp/>advanced<sp/>features<sp/>like<sp/>code<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>What<sp/>happens:</highlight></codeline>
+<codeline><highlight class="normal">1.<sp/>A<sp/>browser<sp/>window<sp/>opens<sp/>to<sp/>the<sp/>Penify<sp/>login<sp/>page</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>After<sp/>successful<sp/>login,<sp/>your<sp/>API<sp/>key<sp/>is<sp/>automatically<sp/>saved</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>The<sp/>tool<sp/>is<sp/>now<sp/>authorized<sp/>to<sp/>use<sp/>Penify&apos;s<sp/>advanced<sp/>features</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Example:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>login</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">---</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">###<sp/>Docgen<sp/>Command</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">The<sp/>`docgen`<sp/>command<sp/>generates<sp/>documentation<sp/>for<sp/>your<sp/>code<sp/>using<sp/>Penify&apos;s<sp/>AI<sp/>services.</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Usage:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>[options]<sp/>[subcommand]</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Options:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`-l,<sp/>--location<sp/>PATH`:<sp/>Path<sp/>to<sp/>a<sp/>specific<sp/>file<sp/>or<sp/>folder<sp/>to<sp/>document<sp/>(default:<sp/>current<sp/>working<sp/>directory)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Subcommands:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`install-hook`:<sp/>Install<sp/>a<sp/>Git<sp/>post-commit<sp/>hook<sp/>to<sp/>automatically<sp/>generate<sp/>documentation</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>`uninstall-hook`:<sp/>Remove<sp/>the<sp/>Git<sp/>post-commit<sp/>hook</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Examples:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>current<sp/>Git<sp/>diff:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>a<sp/>specific<sp/>file:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/main.py</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Document<sp/>an<sp/>entire<sp/>folder:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>-l<sp/>src/components</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Install<sp/>the<sp/>Git<sp/>hook<sp/>for<sp/>automatic<sp/>documentation:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>install-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">**Uninstall<sp/>the<sp/>Git<sp/>hook:**</highlight></codeline>
+<codeline><highlight class="normal">```bash</highlight></codeline>
+<codeline><highlight class="normal">penify<sp/>docgen<sp/>uninstall-hook</highlight></codeline>
+<codeline><highlight class="normal">```</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">####<sp/>Requirements:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Requires<sp/>login<sp/>to<sp/>Penify<sp/>(`penify<sp/>login`)</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Configuration<sp/>Files</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">Penify<sp/>CLI<sp/>stores<sp/>configuration<sp/>in<sp/>the<sp/>following<sp/>locations:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>Global<sp/>configuration:<sp/>`~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">-<sp/>Project-specific<sp/>configuration:<sp/>`.penify`<sp/>in<sp/>your<sp/>Git<sp/>repository<sp/>root</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Environment<sp/>Variables</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">-<sp/>`PENIFY_API_TOKEN`:<sp/>Can<sp/>be<sp/>used<sp/>to<sp/>provide<sp/>the<sp/>API<sp/>token<sp/>instead<sp/>of<sp/>logging<sp/>in</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Troubleshooting</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">If<sp/>you<sp/>encounter<sp/>issues:</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">1.<sp/>Check<sp/>your<sp/>configuration<sp/>with<sp/>`cat<sp/>~/.penify`</highlight></codeline>
+<codeline><highlight class="normal">2.<sp/>Verify<sp/>network<sp/>connectivity<sp/>to<sp/>API<sp/>endpoints</highlight></codeline>
+<codeline><highlight class="normal">3.<sp/>Ensure<sp/>your<sp/>API<sp/>keys<sp/>and<sp/>tokens<sp/>are<sp/>valid</highlight></codeline>
+<codeline><highlight class="normal">4.<sp/>For<sp/>JIRA<sp/>integration<sp/>issues,<sp/>verify<sp/>your<sp/>JIRA<sp/>credentials</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">##<sp/>Additional<sp/>Resources</highlight></codeline>
+<codeline></codeline>
+<codeline><highlight class="normal">For<sp/>more<sp/>information,<sp/>visit<sp/>the<sp/>[Penify<sp/>Documentation](https://docs.penify.dev/).</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/docs/penify-cli-documentation.md"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/penify__hook_2____init_____8py.xml b/docs/xml/penify__hook_2____init_____8py.xml
new file mode 100644
index 0000000..d3d0335
--- /dev/null
+++ b/docs/xml/penify__hook_2____init_____8py.xml
@@ -0,0 +1,13 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify__hook_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/penify__hook_2commands_2____init_____8py.xml b/docs/xml/penify__hook_2commands_2____init_____8py.xml
new file mode 100644
index 0000000..141dfec
--- /dev/null
+++ b/docs/xml/penify__hook_2commands_2____init_____8py.xml
@@ -0,0 +1,16 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="penify__hook_2commands_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1commands">penify_hook::commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1commands" refkind="compound"><highlight class="comment">#<sp/>This<sp/>file<sp/>makes<sp/>the<sp/>commands<sp/>directory<sp/>a<sp/>proper<sp/>Python<sp/>package</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/commands/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/setup_8py.xml b/docs/xml/setup_8py.xml
new file mode 100644
index 0000000..b732c20
--- /dev/null
+++ b/docs/xml/setup_8py.xml
@@ -0,0 +1,46 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="setup_8py" kind="file" language="Python">
+    <compoundname>setup.py</compoundname>
+    <innernamespace refid="namespacesetup">setup</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacesetup" refkind="compound"><highlight class="keyword">from</highlight><highlight class="normal"><sp/>setuptools<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>setup,<sp/>find_packages</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight></codeline>
+<codeline lineno="3"><highlight class="normal"><ref refid="namespacesetup" kindref="compound">setup</ref>(</highlight></codeline>
+<codeline lineno="4" refid="namespacesetup_1ab3a7a0638d76a01367c5bc3cc699447f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>name=</highlight><highlight class="stringliteral">&quot;penify&quot;</highlight><highlight class="normal">,<sp/><sp/></highlight><highlight class="comment">#<sp/>Changed<sp/>from<sp/>&quot;penify&quot;<sp/>to<sp/>a<sp/>more<sp/>unique<sp/>name</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="5" refid="namespacesetup_1a2aa722b36a933088812b50ea79b97a5c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>version=</highlight><highlight class="stringliteral">&quot;0.3.0&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="6" refid="namespacesetup_1aff2375a361fd5865c77bd9aa093be747" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>packages=[</highlight><highlight class="stringliteral">&apos;penify_hook&apos;</highlight><highlight class="normal">],</highlight></codeline>
+<codeline lineno="7" refid="namespacesetup_1abead4f26b530856f858f0d44c7cf2588" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>install_requires=[</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;requests&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;tqdm&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;GitPython&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;colorama&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;litellm&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;jira&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="15" refid="namespacesetup_1ada7058afc98897f073d3f3b8b9157059" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>entry_points={</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;console_scripts&quot;</highlight><highlight class="normal">:<sp/>[</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;penify=penify_hook.main:main&quot;</highlight><highlight class="normal">,<sp/><sp/></highlight><highlight class="comment">#<sp/>Command<sp/>name<sp/>remains<sp/>the<sp/>same</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>},</highlight></codeline>
+<codeline lineno="20" refid="namespacesetup_1a3a57a4772d418a06835249cbade0d86a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>author=</highlight><highlight class="stringliteral">&quot;Suman<sp/>Saurabh&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="21" refid="namespacesetup_1a5b08034343aa2be607722a8b315f3625" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>author_email=</highlight><highlight class="stringliteral">&quot;ss.sumansaurabh92@gmail.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="22" refid="namespacesetup_1aedf461ec52a946bda975938ba0b93ec0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>description=</highlight><highlight class="stringliteral">&quot;A<sp/>penify<sp/>cli<sp/>tool<sp/>to<sp/>generate<sp/>Documentation,<sp/>Commit-summary.&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="23" refid="namespacesetup_1a4cda9dbfb952875376a0749fe08a5bde" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>long_description=open(</highlight><highlight class="stringliteral">&quot;README.md&quot;</highlight><highlight class="normal">).read(),</highlight></codeline>
+<codeline lineno="24" refid="namespacesetup_1a3796ea10c998699d07d391414ff5d720" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>long_description_content_type=</highlight><highlight class="stringliteral">&quot;text/markdown&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="25" refid="namespacesetup_1afc13124aa5c0124e84e1d965e3f4b0fb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>url=</highlight><highlight class="stringliteral">&quot;https://github.com/SingularityX-ai/penify&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="26" refid="namespacesetup_1abe96a9c38c1c61f9f0fdb002c482f785" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>classifiers=[</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Programming<sp/>Language<sp/>::<sp/>Python<sp/>::<sp/>3&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;License<sp/>::<sp/>OSI<sp/>Approved<sp/>::<sp/>MIT<sp/>License&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Operating<sp/>System<sp/>::<sp/>OS<sp/>Independent&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>],</highlight></codeline>
+<codeline lineno="31" refid="namespacesetup_1aa7ca7bc9391b217e81efeb03689d8dbf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>python_requires=</highlight><highlight class="stringliteral">&apos;&gt;=3.6&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="32"><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/setup.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/test__commit__commands_8py.xml b/docs/xml/test__commit__commands_8py.xml
new file mode 100644
index 0000000..210ffd1
--- /dev/null
+++ b/docs/xml/test__commit__commands_8py.xml
@@ -0,0 +1,450 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__commit__commands_8py" kind="file" language="Python">
+    <compoundname>test_commit_commands.py</compoundname>
+    <innerclass refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" prot="public">tests::test_commit_commands::TestCommitCommands</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__commit__commands">tests::test_commit_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__commit__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock,<sp/>call</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands" kindref="compound">penify_hook.commands.commit_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>commit_code,<sp/>setup_commit_parser,<sp/>handle_commit</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands" kindref="compound">TestCommitCommands</ref>:</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1abcd2354a2af4afe19e57877628d3acc2" kindref="member">mock_api_client</ref>(self):</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>an<sp/>instance<sp/>of<sp/>APIClient<sp/>using<sp/>unittest.mock.</highlight></codeline>
+<codeline lineno="13"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="14"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>creates<sp/>a<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>APIClient<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>yields<sp/>it<sp/>along</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance.<sp/>It<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes<sp/>where<sp/>real</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>API<sp/>calls<sp/>should<sp/>be<sp/>avoided.</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>mock<sp/>of<sp/>APIClient<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>APIClient.</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="23"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.api_client.APIClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_client_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>api_client_instance</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>api_client_instance</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="29" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a20e78370ff5bd6223cc1dd4323a86ea4" kindref="member">mock_llm_client</ref>(self):</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mock<sp/>an<sp/>instance<sp/>of<sp/>LLMClient<sp/>for<sp/>testing<sp/>purposes.</highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>yields<sp/>a<sp/>mock<sp/>object<sp/>representing<sp/>an<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient,<sp/>which<sp/>can<sp/>be<sp/>used<sp/>to<sp/>simulate<sp/>interactions<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>language</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model<sp/>during<sp/>testing.<sp/>The<sp/>mock<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>patched<sp/>to<sp/>replace<sp/>the<sp/>actual</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLMClient<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>the<sp/><ref refid="namespacepenify__hook" kindref="compound">penify_hook</ref><sp/>module.</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>two<sp/>elements:</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>mock<sp/>(MagicMock):<sp/>The<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>LLMClient.</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>llm_client_instance<sp/>(MagicMock):<sp/>An<sp/>instance<sp/>of<sp/>the<sp/>mocked<sp/>LLMClient.</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="42"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.llm_client.LLMClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_client_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>llm_client_instance</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>llm_client_instance</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a05adaa9a713ff1be657455d0667bc6be" kindref="member">mock_jira_client</ref>(self):</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>mock<sp/>JIRA<sp/>client<sp/>for<sp/>testing<sp/>purposes.</highlight></codeline>
+<codeline lineno="51"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="52"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>yields<sp/>a<sp/>tuple<sp/>containing<sp/>a<sp/>mock<sp/>JIRA<sp/>client<sp/>instance<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>its<sp/>`is_connected`<sp/>method.<sp/>The<sp/>mock<sp/>client<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>configured<sp/>to<sp/>simulate<sp/>an</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>active<sp/>connection.<sp/>This<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>unit<sp/>tests<sp/>that<sp/>require</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>interaction<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>JIRA<sp/>client<sp/>without<sp/>making<sp/>actual<sp/>network<sp/>calls.</highlight></codeline>
+<codeline lineno="56"><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>the<sp/>mocked<sp/>JIRA<sp/>client<sp/>instance<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>its</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`is_connected`<sp/>method.</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.jira_client.JiraClient&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>jira_instance</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="69" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1aa9b25a4bf692b8736164695072a398f6" kindref="member">mock_commit_doc_gen</ref>(self):</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>the<sp/>CommitDocGenHook<sp/>class<sp/>and<sp/>returns<sp/>a<sp/>MagicMock<sp/>instance.</highlight></codeline>
+<codeline lineno="71"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="72"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>the<sp/>`patch`<sp/>decorator<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>`unittest.mock`<sp/>module</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>create<sp/>a<sp/>mock<sp/>of<sp/>the<sp/>`CommitDocGenHook`<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.<sp/>It<sp/>then<sp/>sets<sp/>up<sp/>this</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>new<sp/>`MagicMock`<sp/>instance<sp/>when<sp/>invoked.<sp/>The<sp/>function</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>yields<sp/>both<sp/>the<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>mocked<sp/>instance,<sp/>allowing<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>easy</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>testing<sp/>of<sp/>functions<sp/>that<sp/>rely<sp/>on<sp/>`CommitDocGenHook`.</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>two<sp/>elements:</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>mock<sp/>(patch):<sp/>The<sp/>patch<sp/>object<sp/>used<sp/>to<sp/>mock<sp/>the<sp/>`CommitDocGenHook`</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>doc_gen_instance<sp/>(MagicMock):<sp/>The<sp/>mocked<sp/>instance<sp/>of</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`CommitDocGenHook`.</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="85"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="86"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock,<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a2842f456a8c0f1bf0f4def17c183c04e" kindref="member">mock_git_folder_search</ref>(self):</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mock<sp/>the<sp/>`recursive_search_git_folder`<sp/>function<sp/>to<sp/>return<sp/>a<sp/>predefined</highlight></codeline>
+<codeline lineno="94"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>git<sp/>folder<sp/>path.</highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="96"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>the<sp/>`patch`<sp/>decorator<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>`unittest.mock`<sp/>module</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>intercept<sp/>calls<sp/>to<sp/>`penify_hook.utils.recursive_search_git_folder`.</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>When<sp/>called,<sp/>it<sp/>will<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"><sp/>instead<sp/>of<sp/>performing<sp/>an</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>actual<sp/>search.<sp/>This<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>useful<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes<sp/>where<sp/>you<sp/>need<sp/>a</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>consistent<sp/>response<sp/>without<sp/>interacting<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>system.</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>MagicMock:<sp/>A<sp/>mock<sp/>object<sp/>that<sp/>simulates<sp/>the<sp/>`recursive_search_git_folder`<sp/>function.</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="105"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="106"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.utils.recursive_search_git_folder&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock:</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@pytest.fixture</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="111" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1afafbae3c9aeb0e50a75996256c02c8be" kindref="member">mock_print_functions</ref>(self):</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Mocks<sp/>the<sp/>print<sp/>functions<sp/>from<sp/>`penify_hook.ui_utils`<sp/>for<sp/>testing</highlight></codeline>
+<codeline lineno="113"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>purposes.</highlight></codeline>
+<codeline lineno="114"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>uses<sp/>Python&apos;s<sp/>`unittest.mock.patch`<sp/>to<sp/>replace<sp/>the<sp/>actual</highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>functions<sp/>(`</highlight><highlight class="keywordflow">print</highlight><highlight class="normal">`,<sp/>`print_warning`,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`print_error`)<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>mock</highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>objects.<sp/>These<sp/>mock<sp/>objects<sp/>can<sp/>be<sp/>used<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>tests<sp/>to<sp/>capture<sp/>calls<sp/>made</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/>these<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>functions<sp/>without<sp/>actually<sp/>printing<sp/>anything.</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Yields:</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tuple:<sp/>A<sp/>tuple<sp/>containing<sp/>three<sp/>mock<sp/>objects<sp/>corresponding<sp/>to<sp/>`print_info`,</highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>`print_warning`,</highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`print_error`.</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="125"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="126"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_info&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_info,<sp/>\</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_warning&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_warning,<sp/>\</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>patch(</highlight><highlight class="stringliteral">&apos;penify_hook.ui_utils.print_error&apos;</highlight><highlight class="normal">,<sp/>create=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>mock_error:</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">yield</highlight><highlight class="normal"><sp/>mock_info,<sp/>mock_warning,<sp/>mock_error</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"></highlight></codeline>
+<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.llm_client.LLMClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="138" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acc4b1e4189792a3f7c11d2a745f479c0" kindref="member">test_commit_code_with_llm_client</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,<sp/></highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/></highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>committing<sp/>code<sp/>using<sp/>an<sp/>LLM<sp/>client.</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>various<sp/>components<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>calls</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>`commit_code`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified<sp/>parameters.<sp/>It<sp/>verifies<sp/>that</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>correct<sp/>mocks<sp/>are<sp/>created<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>appropriate<sp/>arguments.</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"></highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>error<sp/>handling.</highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>git<sp/>folder<sp/>search.</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>document<sp/>generation.</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>LLM<sp/>client<sp/>interaction.</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client<sp/>interaction.</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="156"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.return_value<sp/>=<sp/>llm_instance</highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>LLM<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>calls</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.assert_called_once_with(</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/>llm_instance,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance.run.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="190"><highlight class="normal"></highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.llm_client.LLMClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.jira_client.JiraClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="199" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1af9c09013055ec39ddde86b487aefcf8b" kindref="member">test_commit_code_with_jira_client</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client,<sp/>mock_llm_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>committing<sp/>code<sp/>using<sp/>a<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="203"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="204"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>commit_code<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>various<sp/>parameters,</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>API<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>JIRA<sp/>credentials.<sp/>It<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>JIRA<sp/>client,<sp/>LLM<sp/>client,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>doc<sp/>generator<sp/>to</highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>simulate<sp/>the<sp/>behavior<sp/>of<sp/>the<sp/>real<sp/>classes.<sp/>The<sp/>function<sp/>then<sp/>calls</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>commit_code<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>doc<sp/>generator<sp/>are</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>parameters.</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"></highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>error<sp/>logging.</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>git<sp/>folder<sp/>search<sp/>function.</highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>doc<sp/>generator<sp/>function.</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>JIRA<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>LLM<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>API<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="221"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="222"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_llm_client.return_value<sp/>=<sp/>llm_instance</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>JIRA<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_base=</highlight><highlight class="stringliteral">&quot;http://llm-api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_api_key=</highlight><highlight class="stringliteral">&quot;llm-api-key&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>calls</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.assert_called_once_with(</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/>llm_instance,<sp/>jira_instance)</highlight></codeline>
+<codeline lineno="260"><highlight class="normal"></highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.jira_client.JiraClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_info&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_warning&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.ui_utils.print_error&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="268" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1acea0d934ee0f2b914b0b893736e8fe4e" kindref="member">test_commit_code_with_jira_connection_failure</ref>(self,<sp/>mock_error,<sp/>mock_warning,<sp/>mock_info,</highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>commit_code<sp/>function<sp/>when<sp/>JIRA<sp/>connection<sp/>fails.</highlight></codeline>
+<codeline lineno="272"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="273"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>scenario<sp/>where<sp/>the<sp/>JIRA<sp/>connection<sp/>fails<sp/>during</highlight></codeline>
+<codeline lineno="274"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/>code<sp/>commit.<sp/>It<sp/>sets<sp/>up<sp/>various<sp/>mocks<sp/>to<sp/>simulate<sp/>different<sp/>components</highlight></codeline>
+<codeline lineno="275"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>of<sp/>the<sp/>system<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>then<sp/>calls<sp/>the<sp/>`commit_code`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specific</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parameters.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>handle<sp/>the<sp/>JIRA<sp/>connection</highlight></codeline>
+<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>failure<sp/>gracefully<sp/>by<sp/>logging<sp/>an<sp/>appropriate<sp/>warning.</highlight></codeline>
+<codeline lineno="278"><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_error<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>error<sp/>logging.</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_warning<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>warning<sp/>logging.</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_info<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>info<sp/>logging.</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>searching<sp/>the<sp/>Git<sp/>folder.</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>a<sp/>JIRA<sp/>client.</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>an<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="288"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="289"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>api_instance</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_instance.is_connected.return_value<sp/>=<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_jira_client.return_value<sp/>=<sp/>jira_instance</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>doc_gen_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.return_value<sp/>=<sp/>doc_gen_instance</highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>llm_model=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_url=</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_user=</highlight><highlight class="stringliteral">&quot;jira-user&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>jira_api_token=</highlight><highlight class="stringliteral">&quot;jira-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>JIRA<sp/>warning</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">,<sp/>api_instance,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"></highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commit_analyzer.CommitDocGenHook&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;,<sp/>create=True)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="323" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a43c2ff3707124aa48e8eb581106b8691" kindref="member">test_commit_code_error_handling</ref>(self,<sp/>mock_print,<sp/>mock_exit,<sp/></highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search,<sp/>mock_doc_gen,<sp/>mock_api_client):</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>error<sp/>handling<sp/>in<sp/>the<sp/>test_commit_code<sp/>function.</highlight></codeline>
+<codeline lineno="326"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="327"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/>to<sp/>simulate<sp/>exceptions<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>test<sp/>the<sp/>error</highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>handling<sp/>of<sp/>the<sp/>commit_code<sp/>function.<sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>function</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctly<sp/>prints<sp/>an<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>exits<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>status<sp/>code<sp/>of<sp/>1<sp/>when</highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>exception<sp/>occurs<sp/>during<sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"></highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function,<sp/>used<sp/>to<sp/>verify<sp/>error<sp/>message<sp/>output.</highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>sys.exit<sp/>function,<sp/>used<sp/>to<sp/>verify<sp/>exit<sp/>behavior.</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>git_folder_search<sp/>function,<sp/>returning<sp/>a<sp/>mock<sp/>Git<sp/>folder</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>path.</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>doc_gen<sp/>function,<sp/>simulating<sp/>an<sp/>exception<sp/>during</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>documentation<sp/>generation.</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>directly<sp/>used<sp/>but<sp/>referenced<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>function<sp/>signature.</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="342"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="343"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_doc_gen.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder_search.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a62564c4e8ad59fc46d56cb0f9122a71a" kindref="member">commit_code</ref>(</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url=</highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token=</highlight><highlight class="stringliteral">&quot;api-token&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message=</highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>open_terminal=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>generate_description=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once_with(</highlight><highlight class="stringliteral">&quot;Error:<sp/>Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"></highlight></codeline>
+<codeline lineno="359" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1a4d04b125e102190a768f65f1948f15bc" kindref="member">test_setup_commit_parser</ref>(self):</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>the<sp/>argument<sp/>parser<sp/>for<sp/>the<sp/>commit<sp/>command.</highlight></codeline>
+<codeline lineno="361"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="362"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/>an<sp/>argument<sp/>parser<sp/>to<sp/>handle<sp/>various<sp/>options</highlight></codeline>
+<codeline lineno="363"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>committing<sp/>changes.<sp/>It<sp/>adds<sp/>three<sp/>arguments:<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-m&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--message&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>An<sp/>optional<sp/>argument<sp/>to<sp/>specify<sp/>a<sp/>contextual<sp/>commit<sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a</highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default<sp/>value<sp/>of<sp/></highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">.<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-e&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--terminal&apos;</highlight><highlight class="normal">:<sp/>A<sp/>boolean<sp/>flag<sp/>to<sp/>open</highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>an<sp/>edit<sp/>terminal<sp/>before<sp/>committing.<sp/>-<sp/></highlight><highlight class="stringliteral">&apos;-d&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">or</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;--description&apos;</highlight><highlight class="normal">:<sp/>A<sp/>boolean</highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>flag<sp/>that,<sp/>when<sp/>set<sp/>to<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>indicates<sp/>the<sp/>generation<sp/>of<sp/>a<sp/>commit</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>message<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>title<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>description.</highlight></codeline>
+<codeline lineno="369"><highlight class="normal"></highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>(MagicMock):<sp/>The<sp/>argument<sp/>parser<sp/>to<sp/>be<sp/>configured.</highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="373"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="374"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="375"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1a8627583116eb78e31a4d3cdc16d2f15c" kindref="member">setup_commit_parser</ref>(parser)</highlight></codeline>
+<codeline lineno="376"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="377"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>parser<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>parser.add_argument.call_count<sp/>==<sp/>3</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-m&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--message&quot;</highlight><highlight class="normal">,<sp/>required=</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Commit<sp/>with<sp/>contextual<sp/>commit<sp/>message.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="stringliteral">&quot;N/A&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-e&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--terminal&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_true&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;Open<sp/>edit<sp/>terminal<sp/>before<sp/>committing.&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>parser.add_argument.assert_any_call(</highlight><highlight class="stringliteral">&quot;-d&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;--description&quot;</highlight><highlight class="normal">,<sp/>action=</highlight><highlight class="stringliteral">&quot;store_false&quot;</highlight><highlight class="normal">,<sp/>help=</highlight><highlight class="stringliteral">&quot;It<sp/>will<sp/>generate<sp/>commit<sp/>message<sp/>with<sp/>title<sp/>and<sp/>description.&quot;</highlight><highlight class="normal">,<sp/>default=</highlight><highlight class="keyword">False</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="382"><highlight class="normal"></highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_jira_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.get_llm_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.commit_code&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.commit_commands.print_info&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.constants.API_URL&apos;,<sp/>&quot;http://api.example.com&quot;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="389" refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__commit__commands_1_1TestCommitCommands_1ac13e368262340af98b30fd8ebdac6597" kindref="member">test_handle_commit</ref>(self,<sp/>mock_print_info,<sp/>mock_commit_code,<sp/>mock_get_token,<sp/></highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config,<sp/>mock_get_jira_config):</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>handle_commit<sp/>function<sp/>with<sp/>various<sp/>mock<sp/>objects.</highlight></codeline>
+<codeline lineno="392"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="393"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>LLM<sp/>configuration,<sp/>JIRA</highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>commit<sp/>code.<sp/>It<sp/>then<sp/>creates<sp/>an<sp/>argument<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>calls<sp/>the<sp/>handle_commit<sp/>function.<sp/>Finally,<sp/>it<sp/>verifies<sp/>that<sp/>the<sp/>mock</highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functions<sp/>were<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>expected<sp/>arguments.</highlight></codeline>
+<codeline lineno="397"><highlight class="normal"></highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print_info<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>printing<sp/>information.</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_commit_code<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>committing<sp/>code.</highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>API<sp/>token.</highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>LLM<sp/>configuration.</highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_jira_config<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>retrieving<sp/>JIRA<sp/>configuration.</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="405"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="406"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_llm_config.return_value<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-model&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;http://llm-api.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;llm-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;api-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_jira_config.return_value<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;jira-user&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;jira-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Create<sp/>args</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.message<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.terminal<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>args.description<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1commit__commands_1af4f739f524c38b437e4e47673d683e23" kindref="member">handle_commit</ref>(args)</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="428"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print_info.assert_called_with(</highlight><highlight class="stringliteral">&quot;Generate<sp/>Commit<sp/>Description:<sp/>True&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_commit_code.assert_called_once_with(</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;http://api.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;api-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test<sp/>commit&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;test-model&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;http://llm-api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;llm-key&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;jira-user&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;jira-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_commit_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/test__config__commands_8py.xml b/docs/xml/test__config__commands_8py.xml
new file mode 100644
index 0000000..cd7b938
--- /dev/null
+++ b/docs/xml/test__config__commands_8py.xml
@@ -0,0 +1,465 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__config__commands_8py" kind="file" language="Python">
+    <compoundname>test_config_commands.py</compoundname>
+    <innerclass refid="classtests_1_1test__config__commands_1_1TestConfigCommands" prot="public">tests::test_config_commands::TestConfigCommands</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__config__commands">tests::test_config_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__config__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>mock_open,<sp/>MagicMock</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>pathlib<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Path</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/>get_penify_config,<sp/></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/>get_llm_config,<sp/></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>get_jira_config,<sp/></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>save_llm_config,<sp/></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>save_jira_config,</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/>get_token</highlight></codeline>
+<codeline lineno="14"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16" refid="classtests_1_1test__config__commands_1_1TestConfigCommands" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands" kindref="compound">TestConfigCommands</ref>:</highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.recursive_search_git_folder&apos;)</highlight><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">#<sp/>Updated<sp/>patch<sp/>path<sp/>here</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.makedirs&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="22" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a2e8162082bcdd5652bb37bdb14cf453a" kindref="member">test_get_penify_config_existing_dir</ref>(self,<sp/>mock_file_open,<sp/>mock_makedirs,<sp/>mock_path,<sp/>mock_git_folder):</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_penify_config<sp/>function<sp/>when<sp/>the<sp/>.penify<sp/>config<sp/>directory</highlight></codeline>
+<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exists.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>should<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>create<sp/>a<sp/>new<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>that<sp/>all<sp/>mocked</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functions<sp/>were<sp/>called<sp/>correctly.</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"></highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>open()<sp/>function.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>os.makedirs()<sp/>function.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>Path<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>pathlib<sp/>module.</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>git_folder_search()<sp/>function.</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="35"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>git<sp/>folder<sp/>search</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>Path<sp/>operations</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Path<sp/>exists<sp/>for<sp/>.penify<sp/>dir</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.assert_called_once_with(os.getcwd())</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.assert_called_with(</highlight><highlight class="stringliteral">&apos;.penify&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_makedirs.call_count<sp/>==<sp/>0<sp/><sp/></highlight><highlight class="comment">#<sp/>Should<sp/>not<sp/>create<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.utils.recursive_search_git_folder&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.makedirs&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a33d4760eee3b67e1cde3aed755ebb948" kindref="member">test_get_penify_config_new_dir</ref>(self,<sp/>mock_file_open,<sp/>mock_makedirs,<sp/>mock_path,<sp/>mock_git_folder):</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>get_penify_config<sp/>when<sp/>the<sp/>.penify<sp/>directory<sp/>does</highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>exist.</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>mocks<sp/>various<sp/>system<sp/>calls<sp/>to<sp/>simulate<sp/>a<sp/>scenario<sp/>where</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>.penify<sp/>directory<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>present.<sp/>It<sp/>then<sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appropriate<sp/>actions<sp/>are<sp/>taken<sp/>to<sp/>create<sp/>the<sp/>directory<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>write<sp/>an<sp/>empty</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JSON<sp/>file.</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`os.makedirs`<sp/>function.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`Path`<sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">from<sp/>`pathlib`.</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>a<sp/>git<sp/>folder<sp/>search<sp/>function.</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="75"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="76"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>git<sp/>folder<sp/>search</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_folder.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/mock/git/folder&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>Path<sp/>operations</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.__truediv__.return_value<sp/>=<sp/>mock_path_instance</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Path<sp/>doesn&apos;t<sp/>exist<sp/>for<sp/>.penify<sp/>dir</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path_instance.exists.side_effect<sp/>=<sp/>[</highlight><highlight class="keyword">False</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal">]</highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6559a82d0bf727703d550d1003d3ed20" kindref="member">get_penify_config</ref>()</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_makedirs.assert_called_with(mock_path_instance,<sp/>exist_ok=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once()</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open().write.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;{}&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;llm&quot;:<sp/>{&quot;model&quot;:<sp/>&quot;gpt-4&quot;,<sp/>&quot;api_base&quot;:<sp/>&quot;https://api.openai.com&quot;,<sp/>&quot;api_key&quot;:<sp/>&quot;test-key&quot;}}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1adf9f2233a3f4cc5725b9d4f05758b167" kindref="member">test_get_llm_config_exists</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_llm_config<sp/>function<sp/>when<sp/>the<sp/>configuration<sp/>file<sp/>exists.</highlight></codeline>
+<codeline lineno="99"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="100"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>when<sp/>called.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>get_llm_config<sp/>function<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>that<sp/>it<sp/>returns<sp/>the<sp/>correct<sp/>configuration<sp/>dictionary.<sp/>Additionally,<sp/>it</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>checks<sp/>that<sp/>the<sp/>mock_file_open<sp/>function<sp/>was<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>arguments.</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"></highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open()<sp/>function.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_config()<sp/>function.</highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="110"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="111"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;gpt-4&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://api.openai.com&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="129" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1abd12f028b89aa9cd1152c0b9ece5d3cd" kindref="member">test_get_llm_config_empty</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>get_llm_config<sp/>when<sp/>called<sp/>with<sp/>an<sp/>empty</highlight></codeline>
+<codeline lineno="131"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>file.</highlight></codeline>
+<codeline lineno="132"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="133"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/>but<sp/>returns</highlight></codeline>
+<codeline lineno="134"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>no<sp/>content.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>`get_llm_config`<sp/>function<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>that</highlight></codeline>
+<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>returns<sp/>an<sp/>empty<sp/>dictionary<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>that<sp/>the<sp/>file<sp/>open<sp/>method<sp/>was<sp/>called</highlight></codeline>
+<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exactly<sp/>once<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>arguments.</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"></highlight></codeline>
+<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>built-</highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>get_config<sp/>function.</highlight></codeline>
+<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="142"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{}</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;invalid<sp/>json&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a473984d31452b56acd6ce4011a1248bd" kindref="member">test_get_llm_config_invalid_json</ref>(self,<sp/>mock_print,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>verify<sp/>the<sp/>behavior<sp/>of<sp/>get_llm_config<sp/>when<sp/>reading<sp/>an</highlight></codeline>
+<codeline lineno="160"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>invalid<sp/>JSON<sp/>file.</highlight></codeline>
+<codeline lineno="161"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="162"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/>but<sp/>contains<sp/>invalid</highlight></codeline>
+<codeline lineno="163"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>JSON.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>handle<sp/>this<sp/>gracefully<sp/>by<sp/>printing<sp/>an</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returning<sp/>an<sp/>empty<sp/>dictionary.</highlight></codeline>
+<codeline lineno="165"><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_config<sp/>function,<sp/>which<sp/>returns<sp/>the<sp/>mock<sp/>configuration</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file.</highlight></codeline>
+<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="172"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="173"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a6492bc8e7df6e38bb06ad05e572d4cc0" kindref="member">get_llm_config</ref>()</highlight></codeline>
+<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{}</highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;Error<sp/>reading<sp/>.penify<sp/>config<sp/>file&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;jira&quot;:<sp/>{&quot;url&quot;:<sp/>&quot;https://jira.example.com&quot;,<sp/>&quot;username&quot;:<sp/>&quot;user&quot;,<sp/>&quot;api_token&quot;:<sp/>&quot;token&quot;}}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="188" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1aee37b97432821d19758c6325d4c74bcf" kindref="member">test_get_jira_config_exists</ref>(self,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>that<sp/>get_jira_config<sp/>returns<sp/>the<sp/>correct<sp/>JIRA<sp/>configuration<sp/>when</highlight></codeline>
+<codeline lineno="190"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>configuration<sp/>file<sp/>exists.</highlight></codeline>
+<codeline lineno="191"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="192"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>configuration<sp/>file<sp/>to<sp/>simulate<sp/>its<sp/>existence</highlight></codeline>
+<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>function<sp/>reads<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>returns</highlight></codeline>
+<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>expected<sp/>JIRA<sp/>configuration<sp/>dictionary.<sp/>Additionally,<sp/>it<sp/>checks<sp/>that</highlight></codeline>
+<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>mock<sp/>file<sp/>open<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>appropriate<sp/>arguments.</highlight></codeline>
+<codeline lineno="196"><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`get_config`<sp/>function,<sp/>which<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>mock</highlight></codeline>
+<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration<sp/>file<sp/>object.</highlight></codeline>
+<codeline lineno="201"><highlight class="normal"></highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>This<sp/>test<sp/>function<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>explicitly<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>anything.<sp/>Its<sp/>assertions</highlight></codeline>
+<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>serve<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>the<sp/>verification<sp/>of<sp/>its<sp/>correctness.</highlight></codeline>
+<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="206"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="207"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a15bf3685c4dcb5c15ba6a4055e484cf2" kindref="member">get_jira_config</ref>()</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/>{</highlight></codeline>
+<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;user&apos;</highlight><highlight class="normal">,<sp/></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_config_file,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;json.dump&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="227" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1acd8df8219441b9e9871b903a681400d9" kindref="member">test_save_llm_config_success</ref>(self,<sp/>mock_print,<sp/>mock_json_dump,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>save_llm_config<sp/>function<sp/>successfully.</highlight></codeline>
+<codeline lineno="229"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="230"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>that<sp/>the<sp/>save_llm_config<sp/>function<sp/>correctly<sp/>saves<sp/>an</highlight></codeline>
+<codeline lineno="231"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LLM<sp/>configuration<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles<sp/>various<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>side<sp/>effects.<sp/>It</highlight></codeline>
+<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ensures<sp/>that<sp/>the<sp/>function<sp/>returns<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"><sp/>upon<sp/>successful<sp/>execution,<sp/>writes</highlight></codeline>
+<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>expected<sp/>configuration<sp/>to<sp/>a<sp/>file,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>a<sp/>confirmation<sp/>message.</highlight></codeline>
+<codeline lineno="234"><highlight class="normal"></highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>json.dump.</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/>opening.</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>a<sp/>configuration<sp/>file<sp/>mock.</highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="241"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="242"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.return_value.__enter__.return_value<sp/>=<sp/>mock_file_open</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>json.load<sp/>to<sp/>return<sp/>empty<sp/>dict<sp/>when<sp/>reading</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;json.load&apos;</highlight><highlight class="normal">,<sp/>return_value={}):</highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;https://api.openai.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test-key&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump.assert_called_once()</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>expected_config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;llm&apos;</highlight><highlight class="normal">:<sp/>{</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;model&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;gpt-4&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_base&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://api.openai.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_key&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;test-key&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_json_dump.call_args[0][0]<sp/>==<sp/>expected_config</highlight></codeline>
+<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;configuration<sp/>saved&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.get_penify_config&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>side_effect=IOError(&quot;Permission<sp/>denied&quot;)</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="269" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a73a264dfb21e16003e095b79f6eab2ac" kindref="member">test_save_llm_config_failure</ref>(self,<sp/>mock_print,<sp/>mock_file_open,<sp/>mock_get_config):</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>verify<sp/>that<sp/>the<sp/>save_llm_config<sp/>function<sp/>returns<sp/>False</highlight></codeline>
+<codeline lineno="271"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>prints<sp/>an<sp/>error<sp/>message<sp/>when<sp/>it<sp/>fails<sp/>to<sp/>save<sp/>the<sp/>LLM<sp/>configuration</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>due<sp/>to<sp/>a<sp/>permission<sp/>error.</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"></highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>configuration<sp/>file<sp/>that<sp/>exists<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>calls<sp/>the</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>save_llm_config<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>valid<sp/>parameters.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>Permission</highlight></codeline>
+<codeline lineno="277"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>denied&quot;<sp/>in<sp/>case<sp/>of<sp/>a<sp/>failure.</highlight></codeline>
+<codeline lineno="278"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="279"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="280"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self<sp/>(TestLLMConfig):<sp/>An<sp/>instance<sp/>of<sp/>the<sp/>test<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function,<sp/>which<sp/>will<sp/>be<sp/>used</highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>to<sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>that<sp/>it<sp/>was<sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>expected<sp/>error<sp/>message.</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/>open<sp/>function,<sp/>which<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>used<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>this<sp/>test<sp/>but<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>included<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>a<sp/>parameter<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>completeness.</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>representing<sp/>the<sp/>get_config<sp/>function,<sp/>which<sp/>will<sp/>be</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>used<sp/>to<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>the<sp/>mock<sp/>configuration<sp/>file.</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="288"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="289"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_config_file.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_config.return_value<sp/>=<sp/>mock_config_file</highlight></codeline>
+<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a4617bc5956e502c9555dc0dda0376df4" kindref="member">save_llm_config</ref>(</highlight><highlight class="stringliteral">&quot;gpt-4&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;https://api.openai.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;test-key&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assert</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">False</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_with(</highlight><highlight class="stringliteral">&quot;Error<sp/>saving<sp/>LLM<sp/>configuration:<sp/>Permission<sp/>denied&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;json.dump&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.print&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="305" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1af8d62310da2d768e21770f8f01ff5375" kindref="member">test_save_jira_config_success</ref>(self,<sp/>mock_print,<sp/>mock_json_dump,<sp/>mock_file_open,<sp/>mock_path):</highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>save_jira_config<sp/>function<sp/>to<sp/>ensure<sp/>it<sp/>saves<sp/>JIRA<sp/>configuration</highlight></codeline>
+<codeline lineno="307"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>successfully.</highlight></codeline>
+<codeline lineno="308"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="309"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>various<sp/>dependencies<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>tests<sp/>the</highlight></codeline>
+<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>functionality<sp/>of<sp/>saving<sp/>a<sp/>JIRA<sp/>configuration.<sp/>It<sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>function<sp/>returns<sp/>`</highlight><highlight class="keyword">True</highlight><highlight class="normal">`,<sp/>the<sp/>JSON<sp/>dump<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct</highlight></codeline>
+<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>configuration,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>statement<sp/>contains<sp/>the<sp/>expected<sp/>message.</highlight></codeline>
+<codeline lineno="313"><highlight class="normal"></highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="keywordflow">print</highlight><highlight class="normal"><sp/>function.</highlight></codeline>
+<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>json.dump<sp/>function.</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>open<sp/>function.</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>path<sp/>module.</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="320"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="321"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>json.load<sp/>to<sp/>return<sp/>empty<sp/>dict<sp/>when<sp/>reading</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;json.load&apos;</highlight><highlight class="normal">,<sp/>return_value={}):</highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1ab2486ac2bf16b4a671e49625bfa4f9b4" kindref="member">save_jira_config</ref>(</highlight><highlight class="stringliteral">&quot;https://jira.example.com&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;user&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;token&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_json_dump.assert_called_once()</highlight></codeline>
+<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>expected_config<sp/>=<sp/>{</highlight></codeline>
+<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;jira&apos;</highlight><highlight class="normal">:<sp/>{</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;url&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;https://jira.example.com&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;username&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;user&apos;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&apos;api_token&apos;</highlight><highlight class="normal">:<sp/></highlight><highlight class="stringliteral">&apos;token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_json_dump.call_args[0][0]<sp/>==<sp/>expected_config</highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_print.assert_called_once()</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;configuration<sp/>saved&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>mock_print.call_args[0][0]</highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;api_keys&quot;:<sp/>&quot;config-token&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="349" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a3355f7d313bebaa71694387cf2bc5232" kindref="member">test_get_token_from_env</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>retrieving<sp/>a<sp/>token<sp/>from<sp/>the<sp/>environment<sp/>variable.</highlight></codeline>
+<codeline lineno="351"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="352"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>behavior<sp/>of<sp/>`get_token`<sp/>when<sp/>an<sp/>environment</highlight></codeline>
+<codeline lineno="353"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>set.<sp/>It<sp/>verifies<sp/>that<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>the<sp/></highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal"><sp/>environment</highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>variable<sp/>exists,<sp/>the<sp/>function<sp/>returns<sp/>its<sp/>value<sp/>without<sp/>attempting<sp/>to</highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>read<sp/>a<sp/>file.</highlight></codeline>
+<codeline lineno="356"><highlight class="normal"></highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>file<sp/>operations.</highlight></codeline>
+<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>path<sp/>operations.</highlight></codeline>
+<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>environment<sp/>variable<sp/>retrieval.</highlight></codeline>
+<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="362"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="363"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;env-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;env-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>File<sp/>should<sp/>not<sp/>be<sp/>read<sp/>if<sp/>env<sp/>var<sp/>exists</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_file_open.call_count<sp/>==<sp/>0</highlight></codeline>
+<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;api_keys&quot;:<sp/>&quot;config-token&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="378" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a6c0207be563c3de59a6d16277805114c" kindref="member">test_get_token_from_config</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>retrieving<sp/>a<sp/>token<sp/>from<sp/>the<sp/>configuration.</highlight></codeline>
+<codeline lineno="380"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="381"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>environment<sp/>variables<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>configuration</highlight></codeline>
+<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>files,<sp/>calls<sp/>the<sp/>`get_token`<sp/>function,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>its<sp/>behavior.<sp/>It</highlight></codeline>
+<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verifies<sp/>that<sp/>when<sp/>the<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found,<sp/>the<sp/>function</highlight></codeline>
+<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>reads<sp/>a<sp/>token<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>a<sp/>configuration<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>user</highlight><highlight class="stringliteral">&apos;s<sp/>home</highlight></codeline>
+<codeline lineno="385"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>directory.</highlight></codeline>
+<codeline lineno="386"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="387"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="388"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`pathlib.Path`<sp/></highlight><highlight class="keyword">class</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`os.getenv`<sp/>function.</highlight></codeline>
+<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="392"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="393"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var<sp/>(not<sp/>found)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;config-token&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_home_dir,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;os.getenv&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.config_commands.Path&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;builtins.open&apos;,<sp/>new_callable=mock_open,<sp/>read_data=&apos;{&quot;other_key&quot;:<sp/>&quot;value&quot;}&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="413" refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__config__commands_1_1TestConfigCommands_1a400ca5d9fcdc159714e8df54920f9436" kindref="member">test_get_token_not_found</ref>(self,<sp/>mock_file_open,<sp/>mock_path,<sp/>mock_getenv):</highlight></codeline>
+<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>get_token<sp/>function<sp/>when<sp/>the<sp/>API<sp/>token<sp/>environment<sp/>variable<sp/>is</highlight></codeline>
+<codeline lineno="415"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>found.</highlight></codeline>
+<codeline lineno="416"><highlight class="normal"></highlight></codeline>
+<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>scenario<sp/>where<sp/>the<sp/>`PENIFY_API_TOKEN`</highlight></codeline>
+<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>set.<sp/>It<sp/>mocks<sp/>the<sp/>environment<sp/>variable<sp/>to</highlight></codeline>
+<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the<sp/>function<sp/>returns<sp/>`</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">`.<sp/>The<sp/>test</highlight></codeline>
+<codeline lineno="420"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>also<sp/>checks<sp/>that<sp/>the<sp/>environment<sp/>variable<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>accessed<sp/>once<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>that<sp/>a</highlight></codeline>
+<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>file<sp/>open<sp/>operation<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>attempted<sp/>on<sp/>a<sp/>configuration<sp/>file<sp/>located<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the</highlight></codeline>
+<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>user</highlight><highlight class="stringliteral">&apos;s<sp/>home<sp/>directory.</highlight></codeline>
+<codeline lineno="423"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="424"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="425"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>built-</highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>`open`<sp/>function.</highlight></codeline>
+<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`pathlib.Path`<sp/>module.</highlight></codeline>
+<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>`os.getenv`<sp/>function.</highlight></codeline>
+<codeline lineno="428"><highlight class="normal"></highlight></codeline>
+<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:<sp/>The<sp/>function<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>anything;<sp/>it<sp/>asserts<sp/>conditions<sp/>to<sp/>verify</highlight></codeline>
+<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctness.</highlight></codeline>
+<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="433"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="434"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>env<sp/>var<sp/>(not<sp/>found)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mock<sp/>for<sp/>config<sp/>file</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_path.home.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.__truediv__.return_value<sp/>=<sp/>mock_home_dir</highlight></codeline>
+<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_home_dir.exists.return_value<sp/>=<sp/></highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="443"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a5503d51c905e2f1b299b12d2a73bd812" kindref="member">get_token</ref>()</highlight></codeline>
+<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>result<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getenv.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;PENIFY_API_TOKEN&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_open.assert_called_once_with(mock_home_dir,<sp/></highlight><highlight class="stringliteral">&apos;r&apos;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_config_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/test__doc__commands_8py.xml b/docs/xml/test__doc__commands_8py.xml
new file mode 100644
index 0000000..46e88a8
--- /dev/null
+++ b/docs/xml/test__doc__commands_8py.xml
@@ -0,0 +1,372 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__doc__commands_8py" kind="file" language="Python">
+    <compoundname>test_doc_commands.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__doc__commands">tests::test_doc_commands</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__doc__commands" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>sys</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>argparse<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>ArgumentParser</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal">sys.path.insert(0,<sp/>os.path.abspath(os.path.join(os.path.dirname(__file__),<sp/></highlight><highlight class="stringliteral">&apos;..&apos;</highlight><highlight class="normal">)))</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands" kindref="compound">penify_hook.commands.doc_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>(</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/>generate_doc,</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/>setup_docgen_parser,</highlight></codeline>
+<codeline lineno="12"><highlight class="normal"><sp/><sp/><sp/><sp/>handle_docgen</highlight></codeline>
+<codeline lineno="13"><highlight class="normal">)</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.file_analyzer.FileAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.git_analyzer.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.folder_analyzer.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="21" refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a806110833eb0aad547156faf014b31d8" kindref="member">test_generate_doc_no_location</ref>(mock_getcwd,<sp/>mock_api_client,<sp/></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer,<sp/>mock_file_analyzer,<sp/></highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>function<sp/>to<sp/>generate<sp/>documentation<sp/>without<sp/>location<sp/>information.</highlight></codeline>
+<codeline lineno="25"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>mocks<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client,<sp/>current<sp/>working</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>directory,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer.<sp/>It<sp/>then<sp/>calls<sp/>the<sp/>`generate_doc`<sp/>function</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>fake<sp/>API<sp/>URL<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>token.<sp/>The<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>expected<sp/>to<sp/>initialize</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>API<sp/>client,<sp/>configure<sp/>the<sp/>Git<sp/>analyzer,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>run<sp/>it<sp/>without<sp/>any</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>location<sp/>information.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getcwd<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>os.getcwd().</highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>creating<sp/>an<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>folder<sp/>analysis.</highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>file<sp/>analysis.</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>Git<sp/>analyzer<sp/>setup.</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="39"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="40"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.return_value<sp/>=<sp/>mock_git_instance</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>mock_file_analyzer.assert_not_called()</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>mock_folder_analyzer.assert_not_called()</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.git_analyzer.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.folder_analyzer.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62" refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a0e74c920f258f442914771164fe26b45" kindref="member">test_generate_doc_file_location</ref>(mock_api_client,<sp/>mock_folder_analyzer,<sp/></highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer,<sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>generating<sp/>a<sp/>documentation<sp/>file<sp/>location.</highlight></codeline>
+<codeline lineno="65"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="66"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>process<sp/>of<sp/>generating<sp/>a<sp/>documentation<sp/>file</highlight></codeline>
+<codeline lineno="67"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>location<sp/>using<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client,<sp/>folder<sp/>analyzer,<sp/>file</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>analyzer,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer.<sp/>It<sp/>sets<sp/>up<sp/>the<sp/>necessary<sp/>mocks,<sp/>calls<sp/>the</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>`generate_doc`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified<sp/>parameters,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>asserts<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>appropriate<sp/>methods<sp/>on<sp/>the<sp/>mock<sp/>objects<sp/>are<sp/>called<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>expected.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>folder<sp/>analyzer.</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>analyzer.</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>Git<sp/>analyzer.</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="78"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="79"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.return_value<sp/>=<sp/>mock_file_instance</highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"></highlight></codeline>
+<codeline lineno="95"><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="97"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.FileAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.FolderAnalyzerGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="99"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="100" refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a4bb75610e40d94d42bc169b25403c186" kindref="member">test_generate_doc_folder_location</ref>(mock_api_client,<sp/>mock_folder_analyzer,<sp/></highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer,<sp/>mock_git_analyzer):</highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>function<sp/>to<sp/>generate<sp/>documentation<sp/>for<sp/>a<sp/>folder<sp/>location.</highlight></codeline>
+<codeline lineno="103"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="104"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>It<sp/>sets<sp/>up<sp/>mock<sp/>objects<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>API<sp/>client,<sp/>folder<sp/>analyzer,<sp/>file<sp/>analyzer,</highlight></codeline>
+<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>Git<sp/>analyzer,<sp/>then<sp/>calls<sp/>the<sp/>`generate_doc`<sp/>function<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>specified</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>parameters.<sp/>Finally,<sp/>it<sp/>asserts<sp/>that<sp/>the<sp/>correct<sp/>methods<sp/>on<sp/>the<sp/>mock</highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>objects<sp/>were<sp/>called<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>expected.</highlight></codeline>
+<codeline lineno="108"><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_folder_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>folder<sp/>analyzer.</highlight></codeline>
+<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_file_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>file<sp/>analyzer.</highlight></codeline>
+<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>Git<sp/>analyzer.</highlight></codeline>
+<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="115"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="116"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.return_value<sp/>=<sp/>mock_folder_instance</highlight></codeline>
+<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;src&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_analyzer.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;src&apos;</highlight><highlight class="normal">,<sp/>mock_api_instance)</highlight></codeline>
+<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_folder_instance.run.assert_called_once()</highlight></codeline>
+<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_file_analyzer.assert_not_called()</highlight></codeline>
+<codeline lineno="131"><highlight class="normal"></highlight></codeline>
+<codeline lineno="132"><highlight class="normal"></highlight></codeline>
+<codeline lineno="133"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="134"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.GitDocGenHook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="135"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="136" refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1aec76cc25c23476794234cdadbcaef0c0" kindref="member">test_generate_doc_error_handling</ref>(mock_api_client,<sp/>mock_git_analyzer,<sp/>mock_exit):</highlight></codeline>
+<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>a<sp/>documentation<sp/>string<sp/>for<sp/>the<sp/>provided<sp/>code<sp/>snippet<sp/>using</highlight></codeline>
+<codeline lineno="138"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Google<sp/>Docstring<sp/>style.</highlight></codeline>
+<codeline lineno="139"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="140"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>Short<sp/>one<sp/>line<sp/>description:<sp/>Test<sp/>function<sp/>to<sp/>ensure<sp/>proper<sp/>error</highlight></codeline>
+<codeline lineno="141"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>handling<sp/>during<sp/>API<sp/>calls<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>GitAnalyzer.<sp/><sp/>Multiline<sp/>long<sp/>description:</highlight></codeline>
+<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>This<sp/>test<sp/>function<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>designed<sp/>to<sp/>verify<sp/>that<sp/>the<sp/>generate_doc<sp/>function</highlight></codeline>
+<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>handles<sp/>exceptions<sp/>correctly<sp/>when<sp/>an<sp/>error<sp/>occurs<sp/>during<sp/>API<sp/>interaction</highlight></codeline>
+<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>GitAnalyzer.<sp/>It<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>API<sp/>client<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>a<sp/>mock<sp/>Git<sp/>analyzer,</highlight></codeline>
+<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>causing<sp/>the<sp/>analyzer<sp/>to<sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>an<sp/>exception<sp/>to<sp/>simulate<sp/>a<sp/>failure</highlight></codeline>
+<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/>condition.<sp/>The<sp/>function<sp/>then<sp/>asserts<sp/>that<sp/>the<sp/>exit<sp/>code<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>set<sp/>to<sp/>1<sp/>when</highlight></codeline>
+<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>error<sp/>handling<sp/>mechanism<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>invoked.</highlight></codeline>
+<codeline lineno="148"><highlight class="normal"></highlight></codeline>
+<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>simulating<sp/>the<sp/>API<sp/>client.</highlight></codeline>
+<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_git_analyzer<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>simulating<sp/>the<sp/>Git<sp/>analyzer,<sp/>configured<sp/>to<sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>an</highlight></codeline>
+<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exception.</highlight></codeline>
+<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>mock<sp/>object<sp/>representing<sp/>the<sp/>exit<sp/>function,<sp/>which<sp/>should<sp/>be<sp/>called</highlight></codeline>
+<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>error<sp/>code.</highlight></codeline>
+<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="156"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.return_value<sp/>=<sp/>mock_api_instance</highlight></codeline>
+<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_git_analyzer.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;Test<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Assertions</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="167"><highlight class="normal"></highlight></codeline>
+<codeline lineno="168"><highlight class="normal"></highlight></codeline>
+<codeline lineno="169" refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a0f27751d0ba2acfe40ef7e85bccf47d7" kindref="member">test_setup_docgen_parser</ref>():</highlight></codeline>
+<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>setup_docgen_parser<sp/>function<sp/>to<sp/>ensure<sp/>it<sp/>properly<sp/>configures</highlight></codeline>
+<codeline lineno="171"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>the<sp/>ArgumentParser<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>docgen<sp/>options.</highlight></codeline>
+<codeline lineno="172"><highlight class="normal"></highlight></codeline>
+<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>parser<sp/>correctly<sp/>sets<sp/>up<sp/>docgen<sp/>options<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>handles</highlight></codeline>
+<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/>different<sp/>subcommands<sp/>like<sp/></highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">.</highlight></codeline>
+<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="176"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="177"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>parser<sp/>=<sp/>ArgumentParser()</highlight></codeline>
+<codeline lineno="178"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1acc7f4ead1b11951d885fa5c151c2cbe0" kindref="member">setup_docgen_parser</ref>(parser)</highlight></codeline>
+<codeline lineno="179"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="180"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>that<sp/>docgen<sp/>options<sp/>are<sp/>properly<sp/>set<sp/>up</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;test_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;test_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>install-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Check<sp/>uninstall-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>parser.parse_args([</highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;-l&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">])</highlight></codeline>
+<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.docgen_subcommand<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>args.location<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="193"><highlight class="normal"></highlight></codeline>
+<codeline lineno="194"><highlight class="normal"></highlight></codeline>
+<codeline lineno="195"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="196"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="197"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="198"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="199"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="200" refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1ab74688baa8c9b5ba302c2877a9789d05" kindref="member">test_handle_docgen_install_hook</ref>(mock_exit,<sp/>mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>handling<sp/>of<sp/>the<sp/>&apos;install-hook&apos;<sp/>subcommand.</highlight></codeline>
+<codeline lineno="203"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="204"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>environment<sp/>where<sp/>it<sp/>simulates<sp/>the</highlight></codeline>
+<codeline lineno="205"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>execution<sp/>of<sp/>the<sp/>&apos;install-hook&apos;</highlight><highlight class="normal"><sp/>subcommand.<sp/>It<sp/>verifies<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/>`mock_install_hook`<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>arguments,<sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/>`mock_generate_doc`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`mock_uninstall_hook`<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="208"><highlight class="normal"></highlight></codeline>
+<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>sys.exit.</highlight></codeline>
+<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>fetching<sp/>a<sp/>token.</highlight></codeline>
+<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>uninstalling<sp/>a<sp/>hook.</highlight></codeline>
+<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>Mock<sp/>object<sp/>to<sp/>simulate<sp/>installing<sp/>a<sp/>hook.</highlight></codeline>
+<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="216"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="217"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>install-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="stringliteral">&apos;install-hook&apos;</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_not_called()</highlight></codeline>
+<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="226"><highlight class="normal"></highlight></codeline>
+<codeline lineno="227"><highlight class="normal"></highlight></codeline>
+<codeline lineno="228"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="229"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="230"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="231"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="232"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="233" refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a1458af9ad0128c3ca1263b552fd5e482" kindref="member">test_handle_docgen_uninstall_hook</ref>(mock_exit,<sp/>mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>uninstall-hook<sp/>subcommand<sp/>of<sp/>the<sp/>handle_docgen<sp/>function.</highlight></codeline>
+<codeline lineno="236"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>test<sp/>case<sp/>sets<sp/>up<sp/>a<sp/>mock<sp/>environment<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifies<sp/>that<sp/>the</highlight></codeline>
+<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/>uninstall-hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>location,<sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>generate_doc</highlight></codeline>
+<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>install_hook<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="239"><highlight class="normal"></highlight></codeline>
+<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>exit<sp/>function.</highlight></codeline>
+<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>get_token<sp/>function.</highlight></codeline>
+<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>generate_doc<sp/>function.</highlight></codeline>
+<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>uninstall_hook<sp/>function.</highlight></codeline>
+<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>A<sp/>mock<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>install_hook<sp/>function.</highlight></codeline>
+<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="247"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="248"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>uninstall-hook<sp/>subcommand</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="stringliteral">&apos;uninstall-hook&apos;</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_called_once_with(</highlight><highlight class="stringliteral">&apos;hook_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_not_called()</highlight></codeline>
+<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="257"><highlight class="normal"></highlight></codeline>
+<codeline lineno="258"><highlight class="normal"></highlight></codeline>
+<codeline lineno="259"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.install_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="260"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.uninstall_git_hook&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="261"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.generate_doc&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="262"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="263" refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1ab158ffa48469b6c097a7a55fcb20c21a" kindref="member">test_handle_docgen_generate</ref>(mock_get_token,<sp/>mock_generate_doc,<sp/></highlight></codeline>
+<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook,<sp/>mock_install_hook):</highlight></codeline>
+<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>direct<sp/>documentation<sp/>generation<sp/>functionality.</highlight></codeline>
+<codeline lineno="266"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="267"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>`handle_docgen`<sp/>function<sp/>when<sp/>no<sp/>subcommand<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/>provided.<sp/>It<sp/>verifies<sp/>that<sp/>the<sp/>document<sp/>generation<sp/>hook<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>called<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>uninstall<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>install<sp/>hooks<sp/>are<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>called.</highlight></codeline>
+<codeline lineno="270"><highlight class="normal"></highlight></codeline>
+<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/>to<sp/>get<sp/>authentication<sp/>token.</highlight></codeline>
+<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_generate_doc<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>generating<sp/>documentation.</highlight></codeline>
+<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_uninstall_hook<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>uninstalling<sp/>the<sp/>document<sp/>generation<sp/>hook.</highlight></codeline>
+<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_install_hook<sp/>(MagicMock):<sp/>Mocked<sp/>function<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>installing<sp/>the<sp/>document<sp/>generation<sp/>hook.</highlight></codeline>
+<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="277"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="278"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>direct<sp/>documentation<sp/>generation</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;doc_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_generate_doc.assert_called_once()</highlight></codeline>
+<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_install_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_uninstall_hook.assert_not_called()</highlight></codeline>
+<codeline lineno="287"><highlight class="normal"></highlight></codeline>
+<codeline lineno="288"><highlight class="normal"></highlight></codeline>
+<codeline lineno="289"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.get_token&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="290"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;sys.exit&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="291" refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1af9b01e5fc89255cac96747fa081c442c" kindref="member">test_handle_docgen_no_token</ref>(mock_exit,<sp/>mock_get_token):</highlight></codeline>
+<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>behavior<sp/>of<sp/>the<sp/>`handle_docgen`<sp/>function<sp/>when<sp/>no<sp/>token<sp/>is</highlight></codeline>
+<codeline lineno="293"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>provided.</highlight></codeline>
+<codeline lineno="294"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="295"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>asserts<sp/>that<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>no<sp/>token<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>returned<sp/>by<sp/>`mock_get_token`,</highlight></codeline>
+<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>`handle_docgen`<sp/>function<sp/>will<sp/>call<sp/>`mock_exit`<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>a<sp/>status<sp/>code<sp/>of</highlight></codeline>
+<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>1.</highlight></codeline>
+<codeline lineno="298"><highlight class="normal"></highlight></codeline>
+<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_exit<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`exit`<sp/>function.</highlight></codeline>
+<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_get_token<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`get_token`<sp/>function.</highlight></codeline>
+<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="303"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="304"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>with<sp/>no<sp/>token</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_get_token.return_value<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/>args<sp/>=<sp/>MagicMock(docgen_subcommand=</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">,<sp/>location=</highlight><highlight class="stringliteral">&apos;doc_location&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a2006ab13bff718ef783868a910c0b704" kindref="member">handle_docgen</ref>(args)</highlight></codeline>
+<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_exit.assert_called_once_with(1)</highlight></codeline>
+<codeline lineno="309"><highlight class="normal"></highlight></codeline>
+<codeline lineno="310"><highlight class="normal"></highlight></codeline>
+<codeline lineno="311"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="312"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="313" refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a335e7fd4912192c7276cf31bbebc6eb0" kindref="member">test_generate_doc_with_file_exception</ref>(mock_api_client,<sp/>mock_getcwd):</highlight></codeline>
+<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>documentation<sp/>from<sp/>a<sp/>Python<sp/>source<sp/>file.</highlight></codeline>
+<codeline lineno="315"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="316"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>reads<sp/>a<sp/>Python<sp/>file<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>generates<sp/>a<sp/>docstring<sp/>based<sp/>on<sp/>its</highlight></codeline>
+<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/>content.<sp/>It<sp/>uses<sp/>mock<sp/>objects<sp/>to<sp/>simulate<sp/>API<sp/>calls<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>directory</highlight></codeline>
+<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/>operations<sp/>during<sp/>testing.</highlight></codeline>
+<codeline lineno="319"><highlight class="normal"></highlight></codeline>
+<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_api_client<sp/>(unittest.mock.MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>API<sp/>client<sp/>behavior.</highlight></codeline>
+<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_getcwd<sp/>(unittest.mock.MagicMock):<sp/>A<sp/>mock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>current<sp/>working<sp/>directory<sp/>function.</highlight></codeline>
+<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="324"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="325"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;API<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>file<sp/>location<sp/>with<sp/>exception</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>pytest.raises(SystemExit):</highlight></codeline>
+<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;example.py&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="332"><highlight class="normal"></highlight></codeline>
+<codeline lineno="333"><highlight class="normal"></highlight></codeline>
+<codeline lineno="334"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.commands.doc_commands.os.getcwd&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="335"><highlight class="normal"></highlight><highlight class="preprocessor">@patch(&apos;penify_hook.api_client.APIClient&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="336" refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacetests_1_1test__doc__commands_1a64165ddfdb3071a88422f080f0e529a3" kindref="member">test_generate_doc_with_folder_exception</ref>(mock_api_client,<sp/>mock_getcwd):</highlight></codeline>
+<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Generate<sp/>documentation<sp/>from<sp/>a<sp/>given<sp/>API<sp/>endpoint<sp/>and<sp/>save<sp/>it<sp/>to<sp/>a</highlight></codeline>
+<codeline lineno="338"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>folder.</highlight></codeline>
+<codeline lineno="339"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="340"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>fetches<sp/>data<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>specified<sp/>API<sp/>endpoint,<sp/>processes</highlight></codeline>
+<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/>it,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>saves<sp/>the<sp/>generated<sp/>documentation<sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>the<sp/>provided<sp/>folder.<sp/>If<sp/>an</highlight></codeline>
+<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/>error<sp/>occurs<sp/>during<sp/>the<sp/>fetching<sp/>process,<sp/>a<sp/>SystemExit<sp/>exception<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/>raised<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>an<sp/>appropriate<sp/>message.</highlight></codeline>
+<codeline lineno="344"><highlight class="normal"></highlight></codeline>
+<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>api_url<sp/>(str):<sp/>The<sp/>URL<sp/>of<sp/>the<sp/>API<sp/>endpoint<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>which<sp/>data<sp/>will<sp/>be<sp/>fetched.</highlight></codeline>
+<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>token<sp/>(str):<sp/>The<sp/>authentication<sp/>token<sp/>required<sp/>to<sp/>access<sp/>the<sp/>API.</highlight></codeline>
+<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>folder_path<sp/>(str):<sp/>The<sp/>path<sp/>to<sp/>the<sp/>folder<sp/>where<sp/>the<sp/>documentation<sp/>will<sp/>be<sp/>saved.</highlight></codeline>
+<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="350"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="351"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_api_client.side_effect<sp/>=<sp/><ref refid="classException" kindref="compound">Exception</ref>(</highlight><highlight class="stringliteral">&quot;API<sp/>error&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="353"><highlight class="normal"><sp/><sp/><sp/><sp/>mock_getcwd.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;/fake/current/dir&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Test<sp/>folder<sp/>location<sp/>with<sp/>exception</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>pytest.raises(SystemExit):</highlight></codeline>
+<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1doc__commands_1a4daac68bc563432bf25c85dc78081a25" kindref="member">generate_doc</ref>(</highlight><highlight class="stringliteral">&apos;http://api.example.com&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;fake-token&apos;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&apos;src_folder&apos;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_doc_commands.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/test__web__config_8py.xml b/docs/xml/test__web__config_8py.xml
new file mode 100644
index 0000000..9482cac
--- /dev/null
+++ b/docs/xml/test__web__config_8py.xml
@@ -0,0 +1,110 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="test__web__config_8py" kind="file" language="Python">
+    <compoundname>test_web_config.py</compoundname>
+    <innerclass refid="classtests_1_1test__web__config_1_1TestWebConfig" prot="public">tests::test_web_config::TestWebConfig</innerclass>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <innernamespace refid="namespacetests_1_1test__web__config">tests::test_web_config</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests_1_1test__web__config" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>pytest</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>json</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>http.server</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>threading</highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>socketserver</highlight></codeline>
+<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>time</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>unittest.mock<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>patch,<sp/>MagicMock,<sp/>mock_open</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>webbrowser</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands" kindref="compound">penify_hook.commands.config_commands</ref><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>config_llm_web,<sp/>config_jira_web</highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="classtests_1_1test__web__config_1_1TestWebConfig" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig" kindref="compound">TestWebConfig</ref>:</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;webbrowser.open&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;socketserver.TCPServer&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;pkg_resources.resource_filename&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18" refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig_1afc6440352201d207ea8b4d26f8ccfa35" kindref="member">test_config_llm_web_server_setup</ref>(self,<sp/>mock_resource_filename,<sp/>mock_server,<sp/>mock_webbrowser):</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Set<sp/>up<sp/>and<sp/>test<sp/>the<sp/>web<sp/>server<sp/>configuration<sp/>for<sp/>an<sp/>LLM<sp/>(Large<sp/>Language</highlight></codeline>
+<codeline lineno="20"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Model)<sp/>web<sp/>interface.</highlight></codeline>
+<codeline lineno="21"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="22"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>configures<sp/>a<sp/>mock<sp/>web<sp/>server<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>testing<sp/>purposes,</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>setting<sp/>up<sp/>resource<sp/>filenames,<sp/>mocking<sp/>server<sp/>behavior,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verifying<sp/>that<sp/>the<sp/>web<sp/>browser<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"><sp/>opened<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>the<sp/>server<sp/>starts</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>correctly.<sp/>The<sp/>function<sp/>uses<sp/>various<sp/>mocks<sp/>to<sp/>simulate<sp/>external</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>`resource_filename`<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>`server`.</highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`resource_filename`<sp/>function.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>context<sp/>manager<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>the<sp/>web<sp/>server.</highlight></codeline>
+<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/>simulating<sp/>the<sp/>`webbrowser`<sp/>module.</highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="33"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;mock/template/path&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.return_value.__enter__.return_value<sp/>=<sp/>mock_server_instance</highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>the<sp/>serve_forever<sp/>method<sp/>to<sp/>stop<sp/>after<sp/>being<sp/>called<sp/>once</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">stop_server_after_call():</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.shutdown()</highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.side_effect<sp/>=<sp/>stop_server_after_call</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>patched<sp/>webbrowser</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;builtins.print&apos;</highlight><highlight class="normal">):<sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>print<sp/>statements</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1a185dfc34a655ed80e6c95939b6f3c35c" kindref="member">config_llm_web</ref>()</highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>webbrowser<sp/>was<sp/>opened</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser.assert_called_once()</highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_webbrowser.call_args[0][0].startswith(</highlight><highlight class="stringliteral">&apos;http://localhost:&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>server<sp/>was<sp/>started</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.assert_called_once()</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.assert_called_once()</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;webbrowser.open&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;socketserver.TCPServer&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="preprocessor">@patch(&apos;pkg_resources.resource_filename&apos;)</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59" refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="classtests_1_1test__web__config_1_1TestWebConfig_1a06e600222e426b003850509cb1d3190a" kindref="member">test_config_jira_web_server_setup</ref>(self,<sp/>mock_resource_filename,<sp/>mock_server,<sp/>mock_webbrowser):</highlight></codeline>
+<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Test<sp/>the<sp/>configuration<sp/>and<sp/>setup<sp/>of<sp/>a<sp/>JIRA<sp/>web<sp/>server.</highlight></codeline>
+<codeline lineno="61"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>This<sp/>function<sp/>tests<sp/>the<sp/>entire<sp/>process<sp/>of<sp/>setting<sp/>up<sp/>a<sp/>JIRA<sp/>web<sp/>server,</highlight></codeline>
+<codeline lineno="63"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>including<sp/>mocking<sp/>necessary<sp/>resources,<sp/>configuring<sp/>the<sp/>server<sp/>to<sp/>shut</highlight></codeline>
+<codeline lineno="64"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>down<sp/>after<sp/>handling<sp/>one<sp/>request,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>verifying<sp/>that<sp/>the<sp/>web<sp/>browser<sp/></highlight><highlight class="keywordflow">is</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>opened<sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>the<sp/>correct<sp/>URL.<sp/>The<sp/>function<sp/>uses<sp/>several<sp/>mocks<sp/>to<sp/>simulate</highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>external<sp/>dependencies<sp/>such<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>resource<sp/>files,<sp/>servers,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>web<sp/>browsers.</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>`resource_filename`<sp/>function.</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>server<sp/>setup.</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser<sp/>(MagicMock):<sp/>A<sp/>MagicMock<sp/>object<sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>simulating<sp/>the<sp/>web<sp/>browser<sp/>opening.</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="73"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="74"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Setup<sp/>mocks</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_resource_filename.return_value<sp/>=<sp/></highlight><highlight class="stringliteral">&apos;mock/template/path&apos;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance<sp/>=<sp/>MagicMock()</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.return_value.__enter__.return_value<sp/>=<sp/>mock_server_instance</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Mock<sp/>the<sp/>serve_forever<sp/>method<sp/>to<sp/>stop<sp/>after<sp/>being<sp/>called<sp/>once</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">stop_server_after_call():</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.shutdown()</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.side_effect<sp/>=<sp/>stop_server_after_call</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Call<sp/>function<sp/>with<sp/>patched<sp/>webbrowser</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">with</highlight><highlight class="normal"><sp/>patch(</highlight><highlight class="stringliteral">&apos;builtins.print&apos;</highlight><highlight class="normal">):<sp/><sp/></highlight><highlight class="comment">#<sp/>Suppress<sp/>print<sp/>statements</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacepenify__hook_1_1commands_1_1config__commands_1af115198ea5d6808ccb98733957f50b06" kindref="member">config_jira_web</ref>()</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>webbrowser<sp/>was<sp/>opened</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_webbrowser.assert_called_once()</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">assert</highlight><highlight class="normal"><sp/>mock_webbrowser.call_args[0][0].startswith(</highlight><highlight class="stringliteral">&apos;http://localhost:&apos;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Verify<sp/>server<sp/>was<sp/>started</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server.assert_called_once()</highlight></codeline>
+<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mock_server_instance.serve_forever.assert_called_once()</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/test_web_config.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/tests_2____init_____8py.xml b/docs/xml/tests_2____init_____8py.xml
new file mode 100644
index 0000000..b5fdf08
--- /dev/null
+++ b/docs/xml/tests_2____init_____8py.xml
@@ -0,0 +1,15 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="tests_2____init_____8py" kind="file" language="Python">
+    <compoundname>__init__.py</compoundname>
+    <innernamespace refid="namespacetests">tests</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacetests" refkind="compound"><highlight class="comment">#<sp/>Empty<sp/>file<sp/>to<sp/>make<sp/>tests<sp/>directory<sp/>a<sp/>proper<sp/>Python<sp/>package</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/tests/__init__.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/ui__utils_8py.xml b/docs/xml/ui__utils_8py.xml
new file mode 100644
index 0000000..37643e7
--- /dev/null
+++ b/docs/xml/ui__utils_8py.xml
@@ -0,0 +1,125 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="ui__utils_8py" kind="file" language="Python">
+    <compoundname>ui_utils.py</compoundname>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1ui__utils">penify_hook::ui_utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1ui__utils" refkind="compound"><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="2"><highlight class="stringliteral">UI<sp/>utilities<sp/>for<sp/>Penify<sp/>CLI.</highlight></codeline>
+<codeline lineno="3"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="4"><highlight class="stringliteral">This<sp/>module<sp/>provides<sp/>utility<sp/>functions<sp/>for<sp/>consistent<sp/>UI<sp/>formatting,</highlight></codeline>
+<codeline lineno="5"><highlight class="stringliteral">colored<sp/>output,<sp/>and<sp/>progress<sp/>indicators<sp/>across<sp/>the<sp/>Penify<sp/>CLI<sp/>application.</highlight></codeline>
+<codeline lineno="6"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>colorama<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Fore,<sp/>Style,<sp/>init</highlight></codeline>
+<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>tqdm<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>tqdm</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Initialize<sp/>colorama<sp/>for<sp/>cross-platform<sp/>colored<sp/>terminal<sp/>output</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="12" refid="namespacepenify__hook_1_1ui__utils_1ab560cfade398ac1e0bd47befb52d9f71" refkind="member"><highlight class="normal">init(autoreset=</highlight><highlight class="keyword">True</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="13"><highlight class="normal"></highlight></codeline>
+<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Color<sp/>constants<sp/>for<sp/>different<sp/>message<sp/>types</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="15" refid="namespacepenify__hook_1_1ui__utils_1a9fdcb180915696f5d217032a62c3857c" refkind="member"><highlight class="normal">INFO_COLOR<sp/>=<sp/>Fore.CYAN</highlight></codeline>
+<codeline lineno="16" refid="namespacepenify__hook_1_1ui__utils_1a22c450c5e2b5394618ecf9b636560df4" refkind="member"><highlight class="normal">SUCCESS_COLOR<sp/>=<sp/>Fore.GREEN</highlight></codeline>
+<codeline lineno="17" refid="namespacepenify__hook_1_1ui__utils_1a177bc9b44157844c999e0c1c2c6936ff" refkind="member"><highlight class="normal">WARNING_COLOR<sp/>=<sp/>Fore.YELLOW</highlight></codeline>
+<codeline lineno="18" refid="namespacepenify__hook_1_1ui__utils_1a4ab4e61dfab7973c87bef59c6e1977fe" refkind="member"><highlight class="normal">ERROR_COLOR<sp/>=<sp/>Fore.RED</highlight></codeline>
+<codeline lineno="19" refid="namespacepenify__hook_1_1ui__utils_1aba01b8259f0d66cdc2b4a1b58f9736fc" refkind="member"><highlight class="normal">HIGHLIGHT_COLOR<sp/>=<sp/>Fore.BLUE</highlight></codeline>
+<codeline lineno="20" refid="namespacepenify__hook_1_1ui__utils_1aca0fcee81606857497520ae4290bc9f5" refkind="member"><highlight class="normal">NEUTRAL_COLOR<sp/>=<sp/>Fore.WHITE</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"></highlight></codeline>
+<codeline lineno="22"><highlight class="normal"></highlight><highlight class="comment">#<sp/>Status<sp/>symbols</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="23" refid="namespacepenify__hook_1_1ui__utils_1a3c6fe4bd17c1a5fe76587225ae4beb3e" refkind="member"><highlight class="normal">SUCCESS_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;✓&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="24" refid="namespacepenify__hook_1_1ui__utils_1a6eaea98f1a8cbe16a181647da2fc0a16" refkind="member"><highlight class="normal">WARNING_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;○&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="25" refid="namespacepenify__hook_1_1ui__utils_1aa564e1e1d016c8227d076542e74cecb0" refkind="member"><highlight class="normal">ERROR_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;✗&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="26" refid="namespacepenify__hook_1_1ui__utils_1a3b208e2750a38dd09467a73e4afd9756" refkind="member"><highlight class="normal">PROCESSING_SYMBOL<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;⟳&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"></highlight></codeline>
+<codeline lineno="28" refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(message):</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>an<sp/>informational<sp/>message<sp/>with<sp/>appropriate<sp/>color.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{INFO_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="31"><highlight class="normal"></highlight></codeline>
+<codeline lineno="32" refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" kindref="member">format_success</ref>(message):</highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Formats<sp/>a<sp/>success<sp/>message<sp/>with<sp/>green<sp/>color<sp/>and<sp/>reset<sp/>style.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{SUCCESS_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36" refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" kindref="member">format_warning</ref>(message):</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>warning<sp/>message<sp/>with<sp/>appropriate<sp/>color.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{WARNING_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="39"><highlight class="normal"></highlight></codeline>
+<codeline lineno="40" refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" kindref="member">format_error</ref>(message):</highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>an<sp/>error<sp/>message<sp/>with<sp/>the<sp/>specified<sp/>error<sp/>color.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{ERROR_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="43"><highlight class="normal"></highlight></codeline>
+<codeline lineno="44" refid="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1adcb97fc26b405d2b9cdf5eb7aecc5452" kindref="member">format_highlight</ref>(message):</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>highlighted<sp/>message<sp/>with<sp/>appropriate<sp/>color.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{HIGHLIGHT_COLOR}{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"></highlight></codeline>
+<codeline lineno="48" refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path):</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Format<sp/>a<sp/>file<sp/>path<sp/>with<sp/>a<sp/>warning<sp/>color.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>f</highlight><highlight class="stringliteral">&quot;{WARNING_COLOR}{file_path}{Style.RESET_ALL}&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="51"><highlight class="normal"></highlight></codeline>
+<codeline lineno="52" refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a811f0adf6e9bf71510c379b6fa155e44" kindref="member">print_info</ref>(message):</highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Prints<sp/>an<sp/>informational<sp/>message<sp/>with<sp/>formatting.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(message))</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"></highlight></codeline>
+<codeline lineno="56" refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a2b16aa6b68a9edea5f29f84f1c4be79a" kindref="member">print_success</ref>(message):</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Prints<sp/>a<sp/>formatted<sp/>success<sp/>message.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a532cdb4de7c679ce8b29c3e9116c4776" kindref="member">format_success</ref>(message))</highlight></codeline>
+<codeline lineno="59"><highlight class="normal"></highlight></codeline>
+<codeline lineno="60" refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a1ffbb9671dbe233770268e2dd66a67fa" kindref="member">print_warning</ref>(message):</highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Prints<sp/>a<sp/>warning<sp/>message<sp/>with<sp/>formatted<sp/>output.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a0a6fd2613c6fe053b6e4356cd9e5cda2" kindref="member">format_warning</ref>(message))</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"></highlight></codeline>
+<codeline lineno="64" refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a6f0acd7dd91abfe67d0807803bc3b65f" kindref="member">print_error</ref>(message):</highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>an<sp/>error<sp/>message<sp/>with<sp/>appropriate<sp/>formatting.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/>print(<ref refid="namespacepenify__hook_1_1ui__utils_1a4dd934568897433fa73f9cc182ac4a3e" kindref="member">format_error</ref>(message))</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"></highlight></codeline>
+<codeline lineno="68" refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1adfcbbfe39029ab6d1dd33e7bf75ae115" kindref="member">print_processing</ref>(file_path):</highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>processing<sp/>message<sp/>for<sp/>a<sp/>specified<sp/>file.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>formatted_path<sp/>=<sp/><ref refid="namespacepenify__hook_1_1ui__utils_1af3441fb3c2c3850b8b3b6455a9fdaba4" kindref="member">format_file_path</ref>(file_path)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;\n{format_highlight(f&apos;Processing<sp/>file:<sp/>{formatted_path}&apos;)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="72"><highlight class="normal"></highlight></codeline>
+<codeline lineno="73" refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1aa6e684c00e26199440137a87ed9b195c" kindref="member">print_status</ref>(status,<sp/>message):</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Print<sp/>a<sp/>status<sp/>message<sp/>with<sp/>an<sp/>appropriate<sp/>symbol.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;success&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{SUCCESS_COLOR}{SUCCESS_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;warning&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{NEUTRAL_COLOR}{WARNING_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>status<sp/>==<sp/></highlight><highlight class="stringliteral">&apos;error&apos;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{ERROR_COLOR}{ERROR_SYMBOL}<sp/>{message}{Style.RESET_ALL}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(f</highlight><highlight class="stringliteral">&quot;<sp/><sp/>{PROCESSING_SYMBOL}<sp/>{message}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"></highlight></codeline>
+<codeline lineno="84" refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a12b92532b1458af94f3649d411b5505c" kindref="member">create_progress_bar</ref>(total,<sp/>desc=&quot;Processing&quot;,<sp/>unit=&quot;item&quot;):</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>tqdm<sp/>progress<sp/>bar<sp/>with<sp/>consistent<sp/>styling.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>tqdm(</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total=total,</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc=<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(desc),</highlight></codeline>
+<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unit=unit,</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncols=80,</highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="93"><highlight class="normal"></highlight></codeline>
+<codeline lineno="94" refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a3da02cd1140179a9ce60f62c85fccfef" kindref="member">create_stage_progress_bar</ref>(stages,<sp/>desc=&quot;Processing&quot;):</highlight></codeline>
+<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Create<sp/>a<sp/>tqdm<sp/>progress<sp/>bar<sp/>for<sp/>processing<sp/>stages<sp/>with<sp/>consistent<sp/>styling.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar<sp/>=<sp/>tqdm(</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total=len(stages),</highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc=<ref refid="namespacepenify__hook_1_1ui__utils_1a92c3e466d1912058167be2eacf85b9f6" kindref="member">format_info</ref>(desc),</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unit=</highlight><highlight class="stringliteral">&quot;step&quot;</highlight><highlight class="normal">,</highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncols=80,</highlight></codeline>
+<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ascii=</highlight><highlight class="keyword">True</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
+<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>pbar,<sp/>stages</highlight></codeline>
+<codeline lineno="104"><highlight class="normal"></highlight></codeline>
+<codeline lineno="105" refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1ui__utils_1a5a7340d0fc60fb80f17514d60bf45f1d" kindref="member">update_stage</ref>(pbar,<sp/>stage_name):</highlight></codeline>
+<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Force<sp/>refresh<sp/>with<sp/>a<sp/>custom<sp/>description<sp/>and<sp/>ensure<sp/>it&apos;s<sp/>visible</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Update<sp/>the<sp/>progress<sp/>bar<sp/>with<sp/>a<sp/>new<sp/>stage<sp/>name.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.set_postfix_str(</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)<sp/><sp/></highlight><highlight class="comment">#<sp/>Clear<sp/>any<sp/>existing<sp/>postfix</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.set_description_str(f</highlight><highlight class="stringliteral">&quot;{format_info(stage_name)}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>pbar.refresh()<sp/><sp/></highlight><highlight class="comment">#<sp/>Force<sp/>refresh<sp/>the<sp/>display</highlight><highlight class="normal"></highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/ui_utils.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/utils_8py.xml b/docs/xml/utils_8py.xml
new file mode 100644
index 0000000..3eaad14
--- /dev/null
+++ b/docs/xml/utils_8py.xml
@@ -0,0 +1,116 @@
+<?xml version='1.0' encoding='UTF-8' standalone='no'?>
+<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.4" xml:lang="en-US">
+  <compounddef id="utils_8py" kind="file" language="Python">
+    <compoundname>utils.py</compoundname>
+    <innerclass refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" prot="public">penify_hook::utils::GitRepoNotFoundError</innerclass>
+    <innernamespace refid="namespacepenify__hook">penify_hook</innernamespace>
+    <innernamespace refid="namespacepenify__hook_1_1utils">penify_hook::utils</innernamespace>
+    <briefdescription>
+    </briefdescription>
+    <detaileddescription>
+    </detaileddescription>
+    <programlisting>
+<codeline lineno="1" refid="namespacepenify__hook_1_1utils" refkind="compound"><highlight class="keyword">import</highlight><highlight class="normal"><sp/>logging</highlight></codeline>
+<codeline lineno="2"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>os</highlight></codeline>
+<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>re</highlight></codeline>
+<codeline lineno="4"><highlight class="normal"></highlight></codeline>
+<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>git<sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>Repo</highlight></codeline>
+<codeline lineno="6" refid="namespacepenify__hook_1_1utils_1a0c0c1ed6b197038085c94a90ceedfb01" refkind="member"><highlight class="normal">logger<sp/>=<sp/>logging.getLogger(__name__)</highlight></codeline>
+<codeline lineno="7"><highlight class="normal"></highlight></codeline>
+<codeline lineno="8"><highlight class="normal"></highlight></codeline>
+<codeline lineno="9" refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kindref="compound">GitRepoNotFoundError</ref>(<ref refid="classException" kindref="compound">Exception</ref>):</highlight></codeline>
+<codeline lineno="10"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">pass</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="11"><highlight class="normal"></highlight></codeline>
+<codeline lineno="12"><highlight class="normal"></highlight></codeline>
+<codeline lineno="13" refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1ae236f3c4c8bf5dcddbb92b4c2065eea3" kindref="member">get_repo_details</ref>(repo:<sp/>Repo):</highlight></codeline>
+<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Determine<sp/>the<sp/>details<sp/>of<sp/>a<sp/>repository<sp/>including<sp/>its<sp/>remote<sp/>URL,<sp/>hosting</highlight></codeline>
+<codeline lineno="15"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>service,<sp/>organization<sp/>name,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repository<sp/>name.</highlight></codeline>
+<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/>This<sp/>function<sp/>extracts<sp/>the<sp/>remote<sp/>URL<sp/></highlight><highlight class="keyword">from</highlight><highlight class="normal"><sp/>the<sp/>given<sp/>Git<sp/>repository<sp/>object<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/>determines<sp/>the<sp/>hosting<sp/>service<sp/>(e.g.,<sp/>GitHub,<sp/>Azure<sp/>DevOps,<sp/>Bitbucket,<sp/>GitLab).</highlight></codeline>
+<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/>It<sp/>then<sp/>parses<sp/>the<sp/>URL<sp/>to<sp/>extract<sp/>the<sp/>organization<sp/>name<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>repository<sp/>name.<sp/>If</highlight></codeline>
+<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/>the<sp/>URL<sp/>does<sp/></highlight><highlight class="keywordflow">not</highlight><highlight class="normal"><sp/>match<sp/>any<sp/>known<sp/>hosting<sp/>service<sp/>pattern,<sp/>it<sp/>sets<sp/>the<sp/>hosting</highlight></codeline>
+<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>service<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;Unknown&quot;</highlight><highlight class="normal">.<sp/>The<sp/>function<sp/>handles<sp/>exceptions<sp/>that<sp/>may<sp/>occur<sp/>during</highlight></codeline>
+<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>this<sp/>process<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>logs<sp/>an<sp/>error<sp/>message<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>needed.</highlight></codeline>
+<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/>Args:</highlight></codeline>
+<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo<sp/>(Repo):<sp/>A<sp/>GitPython<sp/>Repo<sp/>object<sp/>representing<sp/>the<sp/>local<sp/>git<sp/>repository.</highlight></codeline>
+<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>Returns:</highlight></codeline>
+<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dict:<sp/>A<sp/>dictionary<sp/>containing<sp/>the<sp/>organization<sp/>name,<sp/>repository<sp/>name,<sp/></highlight><highlight class="keywordflow">and</highlight><highlight class="normal"><sp/>hosting</highlight></codeline>
+<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>service.</highlight></codeline>
+<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>remote_url<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Unknown&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>org_name<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="35"><highlight class="normal"></highlight></codeline>
+<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Get<sp/>the<sp/>remote<sp/>URL</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remote<sp/>=<sp/>repo.remotes.origin.url</highlight></codeline>
+<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>remote_url<sp/>=<sp/>remote</highlight></codeline>
+<codeline lineno="40"><highlight class="normal"></highlight></codeline>
+<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>Determine<sp/>the<sp/>hosting<sp/>service<sp/>based<sp/>on<sp/>the<sp/>URL</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;github.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;GITHUB&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*github\.com[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;dev.azure.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*dev\.azure\.com/(.*?)/(.*?)/_git/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;visualstudio.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*@(.*?)\.visualstudio\.com/(.*?)/_git/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;bitbucket.org&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;BITBUCKET&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*bitbucket\.org[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;gitlab.com&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>remote:</highlight></codeline>
+<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;GITLAB&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/>re.match(</highlight><highlight class="stringliteral">r&quot;.*gitlab\.com[:/](.*?)/(.*?)(\.git)?$&quot;</highlight><highlight class="normal">,<sp/>remote)</highlight></codeline>
+<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>hosting_service<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Unknown<sp/>Hosting<sp/>Service&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>match<sp/>=<sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="60"><highlight class="normal"></highlight></codeline>
+<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>match:</highlight></codeline>
+<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>org_name<sp/>=<sp/>match.group(1)</highlight></codeline>
+<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/>match.group(2)</highlight></codeline>
+<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>For<sp/>Azure<sp/>DevOps,<sp/>adjust<sp/>the<sp/>group<sp/>indices</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>hosting_service<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;AZUREDEVOPS&quot;</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>repo_name<sp/>=<sp/>match.group(3)</highlight></codeline>
+<codeline lineno="68"><highlight class="normal"></highlight></codeline>
+<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>Exception<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>e:</highlight></codeline>
+<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>logger.error(f</highlight><highlight class="stringliteral">&quot;Error<sp/>determining<sp/>GIT<sp/>provider:<sp/>{e}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+<codeline lineno="71"><highlight class="normal"></highlight></codeline>
+<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{</highlight></codeline>
+<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;organization_name&quot;</highlight><highlight class="normal">:<sp/>org_name,</highlight></codeline>
+<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;repo_name&quot;</highlight><highlight class="normal">:<sp/>repo_name,</highlight></codeline>
+<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;vendor&quot;</highlight><highlight class="normal">:<sp/>hosting_service</highlight></codeline>
+<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
+<codeline lineno="77"><highlight class="normal"></highlight></codeline>
+<codeline lineno="78" refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(folder_path):</highlight></codeline>
+<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Recursively<sp/>searches<sp/>for<sp/>a<sp/>.git<sp/>folder<sp/>starting<sp/>from<sp/>the<sp/>given<sp/>directory.&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>os.path.isdir(folder_path):</highlight></codeline>
+<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;.git&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>os.listdir(folder_path):</highlight></codeline>
+<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>folder_path</highlight></codeline>
+<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>reached<sp/>the<sp/>root<sp/>of<sp/>the<sp/>filesystem</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>folder_path<sp/>==<sp/>os.path.dirname(folder_path):</highlight></codeline>
+<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">None</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
+<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="namespacepenify__hook_1_1utils_1a95c3f9c80860d6a2e2d061d2fb660a3f" kindref="member">recursive_search_git_folder</ref>(os.path.dirname(folder_path))</highlight></codeline>
+<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="89" refid="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal"><ref refid="namespacepenify__hook_1_1utils_1a4ec5335a4026c22a34a3a8ccf665a5f2" kindref="member">find_git_parent</ref>(path):</highlight></codeline>
+<codeline lineno="90"><highlight class="normal"></highlight></codeline>
+<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Traverse<sp/>up<sp/>from<sp/>the<sp/>given<sp/>path<sp/>to<sp/>find<sp/>the<sp/>nearest<sp/>directory<sp/>containing<sp/>a<sp/>.git</highlight></codeline>
+<codeline lineno="92"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>subdirectory.&quot;&quot;&quot;</highlight></codeline>
+<codeline lineno="93"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.path.abspath(path)</highlight></codeline>
+<codeline lineno="94"><highlight class="stringliteral"></highlight></codeline>
+<codeline lineno="95"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>current_dir<sp/>!=<sp/>os.path.dirname(current_dir):<sp/><sp/></highlight><highlight class="comment">#<sp/>Traverse<sp/>up<sp/>to<sp/>the<sp/>root<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>os.path.isdir(os.path.join(current_dir,<sp/></highlight><highlight class="stringliteral">&quot;.git&quot;</highlight><highlight class="normal">)):</highlight></codeline>
+<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>current_dir<sp/><sp/></highlight><highlight class="comment">#<sp/>Return<sp/>the<sp/>parent<sp/>folder<sp/>containing<sp/>the<sp/>.git<sp/>directory</highlight><highlight class="normal"></highlight></codeline>
+<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current_dir<sp/>=<sp/>os.path.dirname(current_dir)</highlight></codeline>
+<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
+<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/><ref refid="classpenify__hook_1_1utils_1_1GitRepoNotFoundError" kindref="compound">GitRepoNotFoundError</ref>(f</highlight><highlight class="stringliteral">&quot;No<sp/>Git<sp/>repository<sp/>found<sp/>in<sp/>the<sp/>path<sp/>or<sp/>any<sp/>of<sp/>its<sp/>parent<sp/>directories:<sp/>{path}&quot;</highlight><highlight class="normal">)</highlight></codeline>
+    </programlisting>
+    <location file="/tmp/github_reposRepoArchDocGenContext/Penify-dev/penify-cli/penify_hook/utils.py"/>
+  </compounddef>
+</doxygen>
diff --git a/docs/xml/xml.xsd b/docs/xml/xml.xsd
new file mode 100644
index 0000000..9f80fe1
--- /dev/null
+++ b/docs/xml/xml.xsd
@@ -0,0 +1,23 @@
+<?xml version='1.0'?>
+<xsd:schema targetNamespace="http://www.w3.org/XML/1998/namespace"
+            xmlns:xsd="http://www.w3.org/2001/XMLSchema"
+            xml:lang="en">
+
+  <xsd:attribute name="lang" type="xsd:language">
+  </xsd:attribute>
+
+  <xsd:attribute name="space" default="preserve">
+    <xsd:simpleType>
+      <xsd:restriction base="xsd:NCName">
+        <xsd:enumeration value="default"/>
+        <xsd:enumeration value="preserve"/>
+      </xsd:restriction>
+    </xsd:simpleType>
+  </xsd:attribute>
+
+  <xsd:attributeGroup name="specialAttrs">
+    <xsd:attribute ref="xml:lang"/>
+    <xsd:attribute ref="xml:space"/>
+  </xsd:attributeGroup>
+
+</xsd:schema>