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@NLM-DIR

NLM Division of Intramural Research

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  1. TPMCalculator TPMCalculator Public

    TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files

    C++ 136 34

  2. vadr vadr Public

    Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation

    Perl 114 27

  3. BAMscale BAMscale Public

    BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.

    C 73 17

  4. pm4ngs pm4ngs Public

    Project Manager for NGS data analysis

    Python 31 10

  5. ribovore ribovore Public

    Perl 17 5

  6. gtax gtax Public

    GTax python package provides tools for the creation of the GTax sequence-based database. This database includes one assembly per organism deposited in the NCBI Genomes database.

    Python 7 4

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