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Update data.py #4

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8 changes: 4 additions & 4 deletions maxatac/analyses/data.py
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Expand Up @@ -15,11 +15,11 @@ def run_data(args):
# Path to the directory where the project data should be installed. Default: ~/opt
base_dir = get_dir(args.output)

# Path to the maxATAC directory in the install directory. Default: ~/opt/maxatac
maxatac_dir = get_dir(os.path.join(base_dir, "maxatac"))
# Path to the maxATAC directory in the install directory. Default: ~/opt/quant-maxatac
maxatac_dir = get_dir(os.path.join(base_dir, "quant-maxatac"))

# Path the repo directory and the final directory. Default: ~/opt/maxatac/maxATAC_data
maxatac_repo_dir = os.path.join(maxatac_dir, "maxATAC_data")
# Path the repo directory and the final directory. Default: ~/opt/maxatac/quant-maxATAC_data
maxatac_repo_dir = os.path.join(maxatac_dir, "quant-maxATAC_data")

# Path final directory (it is renamed for simplicity). Default: ~/opt/maxatac/data
maxatac_final_dir = os.path.join(maxatac_dir, "data")
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