Address Nextflow linting, add param validation, reformatting #68
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- Removed utils.py code, placed functions into compare_calc.py - Refactored compare_calc.py for efficient access of dataframes - Fixed bug where NaN `junction_aa` values were not dropped prior to calculation of Jaccard and Sorensen matrices
Reformated code to address new Nextflow linting issues for strict syntax compatibility, namely: - moving statements into workflows - making implicit closure parameters explicit - removing use of projectDir in processes Added nf-schema for parameter validation
Unit Test Results10 tests 10 ✅ 3m 11s ⏱️ Results for commit fb3461f. ♻️ This comment has been updated with latest results. |
Moving container to modules.config instead of specifying in every process
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