v2.2.1

What's Changed

• Develop issue86 by @xiaoliz0 in #87
• Fix issue 88 by @xiaoliz0 in #89

Full Changelog: v2.2.0...v2.2.1

There will be much new and big changes coming later. So I would like to release a latest version of PRONTO for current codes.

v2.2.0

What's Changed

• Re-format the CNV overview plots in ppt report. issue76 by @xiaoliz0 in #77
• chore: update dependencies in Dockerfile by @marrip in #81
• Update PRONTO to handle the different date format in MTF files by @xiaoliz0 in #84
• 82 hus testing of pronto latest fails by @marrip in #85

Full Changelog: v2.1.3...v2.2.0

v2.1.3

What's Changed

• fix: add poppler to Dockerfile by @marrip in #75

Full Changelog: v2.1.2...v2.1.3

v2.1.2

What's Changed

• Bug fix for issue#70: The Comments column in MTF file is not fully printed into report. by @xiaoliz0 in #72
• Develop issue66 by @xiaoliz0 in #68
• Update README.md by @xiaoliz0 in #73

Full Changelog: v2.0.1...v2.1.2

v2.0.1

Bug fix reported from OUS.
Fix the bug to make the PRONTO could read MTF file in OUS.

v2.0.0

What's Changed

• solving issue 42 by @marrip in #48
• Introduce globbed paths by @marrip in #53
• Provide test data hus ous by @marrip in #56
• use smaller docker base image by @marrip in #55
• Address comments from pr by @marrip in #60
• Add MTF version year + table headers with format "_" by @xiaoliz0 in #61
• feat: handle absent columns in old data by @marrip in #63
• Updates based on the requests from biology group before Christmas last year. by @xiaoliz0 in #50
• Fix the issue64 reported in GitHub. by @xiaoliz0 in #67

Full Changelog: v1.3.0...v2.0.0

PRONTO version 1.3.0

This is PRONTO release version 1.3.0 to fixed the previous closed issues. There is a merging request with some changes for scripts. I release current scripts before the merging.

PRONTO version 1.2.0

This is PRONTO release version 1.2.0 to fixed the bug of RNA_material_id, problem reported in the "Issues", update all the script fitting for the new MTF format version 2024.

PRONTO version 1.1

This is PRONTO release version 1.1 to fixed the problem reported in the "Issues", update all the requests and comments in the discussion for the previous releasing version 1.0

PRONTO version 1.0

This is PRONTO release version 1.0