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Nsoblath/issue 198 #199

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@nsoblath nsoblath commented Jan 4, 2022

Closes #198

Noah Oblath added 30 commits September 24, 2021 17:32
Trying to fix the use of vcpkg-installed packages
7e4f4ac
Problem with splitting command on multiple lines
a1f37e4
Again with the multiline thing
1a401ed
Reverting previous change
a337e19
Switch Windows build to 32-bit (x86). Use FETK v1.8.0
6a97d67
Switch back to main branch for FETK
0273d22
Put FETK variables in one place and fix typo
8c3f5bf
Remove trace expand for easier debugging. Change build logic to get d…
3050ea8 
…ifferent build commands for FETK under windows vs mac+linux
Install FETK after build, and minor cleanup
770988a
Update cmake args for geoflow
7a2fec3
Add tmate session for potential debugging
7e7e85f
Reverting a change
42e7fc8
Hopefully fixing cmake commands for geoflow, pbam, and pbsam under wi…
c03d054 
…ndows
Expect same libraries now in Windows
8ab4de1
Dev branch of geoflow and attempt to build as a subdirectory
a28561b
Geoflow updates
60ba2e0
Set Geoflow-enabling option
4622f2e
Turn off within-build submodule update
780d2e4
Attempting to deal with the installed name of the umfpack library
c1de9c8
Adapt to different blas libraries in windows vs linux/mac
7d8fba5
Try out switching FETK build/installation to using ExternalProject
1b743f6
Don't need to specify platform or architecture in the external projec…
9b7eaea 
…t's config options
Sorting out source directories
4695638
Specify all the necessary directories, and do it better this time
f3ee053
Trying to fix the binary directory
72efe62
Another attempt to fix the external project directories
2f2f66e
Correctly set the FETK_INSTALL_PREFIX
2137263
Include the toolchain file if it's defined
a313330
Some debugging for the windows build.
63778b4
Add FindUMFPACK.cmake and use it
b0003db
Noah Oblath added 27 commits December 23, 2021 02:24
Need to specify the python version to CMake
df7c8aa
Min and max python versions
6ddced8
Treat version numbers as strings until they're into CMake
b7d0fa3
Fix python version variable
c7e7466
Add ldd step for debugging windows use test
7290e59
Let's see if it's just Python/PYGBE causing problems on the windows b…
b0152c8 
…uild
Let's see if it's the python linking or the PYGBE-enabled code is cau…
2c7d4d2 
…sing the Windows use test problem
Fixing the declaration of mol_dirname for the Windows build and re-en…
faca16a 
…abling the use of PYGBE
Some documentation updates
7cb7648
Try including PYGBE without doing _splitpath
a38f28e
Get tmate in windows after build
507b161
Specify Python architecture
c6bb2b3
Revert tmate to on failure after build
7689ddc
[skip ci]
19207e1 
Test skipping the CI process, and also minor docs update
Retesting with all selected examples enabled
99ad438
Remove examples that fail
5c431bf
Added comments on CMake policy choices
de954f2
New FETK version
76fe1b6
Cleanup
2083997
Re-enable examples to check current status
91de12f
[skip ci] Updated current status of examples in run_selected_examples…
5cb0b67 
….sh.
Add metis build to the Dockerfile
10bca7e
Update FETK version in the Dockerfile
b997cf6
Replace pbsam-auto with pbsam in a couple of examples
57fea74
Updated run_selected_examples.sh with gdb bt of geoflow/glycerol.in e…
93a6079 
…xample
[skip ci] Updated releases.rst
d53af54
Comment out non-running examples
872a956
@nsoblath nsoblath linked an issue Jan 4, 2022 that may be closed by this pull request
Multithreaded Build #198
Open
@nsoblath nsoblath changed the base branch from main to nsoblath/issue_163 January 4, 2022 17:01
Base automatically changed from nsoblath/issue_163 to master January 24, 2022 23:34
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