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[WIP] Working version of dune-peits in serial with latest Dune, PETSc and Zoltan #21

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[WIP] Working version of dune-peits in serial with latest Dune, PETSc and Zoltan #21

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@RolandMacDoland RolandMacDoland commented Aug 14, 2019

Fixes #13 and #14
This branch contains new features:

  • A Dockerfile to build a dune-peits environment image with Dune 2.6, PETSc and Zoltan. All necessary modules are installed and loaded using Spack/Environment modules and are ready to be used. The image can be found here https://hub.docker.com/r/uclrits/peits under the development tag. After pulling the image from DockerHub (docker pull uclrits/peits:development), and git cloning the PEITS repo, checking out the serial branch, a container can be run and synced using docker run -it -v $(pwd):/home/PEITS.
  • A BUILD script that builds the dune-peits module against Dune.
  • A summary of why dune-peits fails in parallel can be found in the dune-peits.cc at the Zoltan section.

vagrant and others added 29 commits April 29, 2019 14:43
Initial fines from the duneproject command
db92cb5
Start a fresh install from the dune process
0cbbab9
Add the ALUGRID config file to git
b6851aa
The mapper method is deprecated and has been renamed blockMapper
60547b4
EntityPointer is deprecated. Instead, use Entity. Remove commented lines
e2f8d36
EntityPointer is deprecated. Replace with Entity
8e0e15a
Mapper has been renamed BlockMapper
ef97874
Add a missing reference declaration and call to the algorithm method
74ec2d9
2.6 release version of model.hh and add the sigma vector
901250a
2.6 release version of dirichletconstraints.hh
f724533
Add the elementID attribute
7cc9f2b
Add the uniformCond_ attribute
407aa46
Add uniformCondValue_ attribute
e68de26
A batch of class attributes
baab4a0
Add error attribute and filling the constructor
479283f
Two custom methods
0b85260
Add another method
28d35b3
Penalies are used for Discontinuous Galerkin methods (not the case here)
3a7aec8
Remove Neuman boundary conditions related logic
a5aba29
Match parameters
37a0831
Saving files
697a116
A Dockerfile to install PETSc, Zoltan from Spack and download Dune ta…
d467828 
…rballs
Uncomment the build from Spack container
e528c1c
Add config.opts file
064180f
Merge branch 'dune-install' into serial
075d75b
Append bashrc to load modules
cd2bbe4
Add boost install from Spack
7501f0e
A build bash script to run PEITS build against Dune
a7d8ae3
A summary of why dune-peits fails in parallel, to the best of our kno…
4d65c32 
…wledge
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RolandMacDoland commented Aug 14, 2019

@dpshelio I'm happy to hear suggestions on how to make things better here.

@dpshelio dpshelio requested a review from giordano August 19, 2019 14:15
@giordano giordano removed their request for review February 11, 2021 14:19
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Install using latest dependencies versions

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@RolandMacDoland @dpshelio