messing around with cmake in cice5 #125

anton-seaice · 2025-11-20T00:45:55Z

Testing for #126

🚀 The latest prerelease access-om2/pr125-12 at 969e762 is here: #125 (comment) 🚀

🚀 The latest prerelease access-om2/pr125-20 at 75f8e0c is here: #125 (comment) 🚀

github-actions · 2025-11-20T01:02:38Z

🚀 Attempted to deploy access-om2 Prerelease pr125-1 with commit 5fdff97

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github-actions · 2025-11-20T01:17:43Z

🚀 Attempted to deploy access-om2 Prerelease pr125-2 with commit 03d8a3a

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github-actions · 2025-11-20T01:45:44Z

🚀 Attempted to deploy access-om2 Prerelease pr125-3 with commit ede63f0

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github-actions · 2025-11-20T03:00:16Z

🚀 Attempted to deploy access-om2 Prerelease pr125-4 with commit bcb94bf

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github-actions · 2025-11-20T03:16:20Z

🚀 Attempted to deploy access-om2 Prerelease pr125-5 with commit 449be27

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om2, defined in ./spack.yaml, will be deployed to Gadi as:

2025.09.000 as a Release (when merged).
pr125-5 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr125-5

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr125-5 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version bf617a8049ac2837271e0d20d223a16f8523665a
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-11-20T03:31:09Z

🚀 Attempted to deploy access-om2 Prerelease pr125-6 with commit 8163483

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anton-seaice · 2025-11-20T03:53:52Z

spack.environment.environment.SpackEnvironmentViewError: The environment view in /g/data/vk83/prerelease/apps/spack/0.22/environments/access-om2-pr125-6/.spack-env/view could not be created, because the following two specs project to the same prefix:
    access-om2@git.2025.09.000=latest%intel@=19.0.5.281~deterministic build_system=bundle arch=linux-rocky8-x86_64, and
    access-om2@git.2025.09.000=latest%intel@=19.0.5.281~deterministic build_system=bundle arch=linux-rocky8-x86_64.
    To resolve this issue:
        a. use `concretization:unify:true` to ensure there is only one package per spec in the environment, or
        b. disable views with `view:false`, or
        c. create custom view projections.

github-actions · 2025-11-21T03:18:04Z

🚀 Attempted to deploy access-om2 Prerelease pr125-7 with commit b33d0dc

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github-actions · 2025-11-21T03:27:31Z

🚀 Attempted to deploy access-om2 Prerelease pr125-8 with commit 2145786

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github-actions · 2025-11-21T03:28:16Z

🚀 Attempted to deploy access-om2 Prerelease pr125-9 with commit 5c7f739

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github-actions · 2025-11-21T03:44:00Z

🚀 Attempted to deploy access-om2 Prerelease pr125-10 with commit 59ebc21

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anton-seaice · 2025-11-21T03:46:25Z

After prerelease injection:

   modules:
    default:
      tcl:
        projections:
          access-om2: '{name}/pr125-11'
          ^cice5: 'access-om2/dependencies/pr125-11/{name}/2025.12.000-{^cice5.variants.nxglob.value}x{^cice5.variants.nyglob.value}'
          cice5: 'access-om2/dependencies/pr125-11/{name}/46ef92b232632663855abb4088ffbd76378c27b5-{hash:7}'
          libaccessom2: 'access-om2/dependencies/pr125-11/{name}/2025.05.001-{hash:7}'
          mom5: 'access-om2/dependencies/pr125-11/{name}/2025.08.000-{hash:7}'
          oasis3-mct: 'access-om2/dependencies/pr125-11/{name}/2025.03.001-{hash:7}'
          openmpi: 'access-om2/dependencies/pr125-11/{name}/4.1.5-{hash:7}'

github-actions · 2025-11-21T03:48:33Z

🚀 Attempted to deploy access-om2 Prerelease pr125-11 with commit 0997ee6

🖥️ `Gadi` Deployment ❌

github-actions · 2025-11-24T05:46:35Z

🚀 Attempted to deploy access-om2 Prerelease pr125-12 with commit 969e762

🖥️ `Gadi` Deployment ❌

github-actions · 2025-11-27T01:02:43Z

🚀 Attempted to deploy access-om2 Prerelease pr125-12 with commit 969e762

🖥️ `Gadi` Deployment ❌

anton-seaice · 2025-11-27T02:15:53Z

!redeploy

github-actions · 2025-11-27T02:17:12Z

🚀 Attempted to deploy access-om2 Prerelease pr125-14 with commit 969e762

🖥️ `Gadi` Deployment ❌

anton-seaice · 2025-11-27T02:20:04Z

!redeploy

github-actions · 2025-11-27T02:28:48Z

🚀 Attempted to deploy access-om2 Prerelease pr125-15 with commit 969e762

🖥️ `Gadi` Deployment ❌

github-actions · 2025-11-27T02:52:13Z

🚀 Attempted to deploy access-om2 Prerelease pr125-16 with commit 5132b9f

🖥️ `Gadi` Deployment ❌

anton-seaice · 2025-11-27T03:17:36Z

Very close:

$module avail access-om2/pr125-16
--------------------------------------------------------------------------------------------------------------------------- /g/data/vk83/prerelease/modules ----------------------------------------------------------------------------------------------------------------------------
access-om2/pr125-16/2025.12.000-360x300  access-om2/pr125-16/2025.12.000-1440x1080  access-om2/pr125-16/2025.12.000-3600x2700

$ module load access-om2/pr125-16/2025.12.000-3600x2700  
Loading access-om2/pr125-16/2025.12.000-3600x2700
  Loading requirement: access-om2/dependencies/pr125-16/openmpi/4.1.5-7hthlkf access-om2/dependencies/pr125-16/oasis3-mct/2025.03.001-fvxfc6y access-om2/dependencies/pr125-16/libaccessom2/2025.05.001-qsfaprb
    access-om2/dependencies/pr125-16/cice5/46ef92b232632663855abb4088ffbd76378c27b5-mksolsa access-om2/dependencies/pr125-16/mom5/2025.08.000-kpkemvt

github-actions · 2025-12-03T04:04:19Z

🚀 Attempted to deploy access-om2 Prerelease pr125-17 with commit 066be63

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om2, defined in ./spack.yaml, will be deployed to Gadi as:

2025.12.000 as a Release (when merged).
pr125-17 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr125-17

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr125-17 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2817e9e41a6142cb617b216e53c7f3fef5a8da52
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-12-03T04:24:58Z

🚀 Attempted to deploy access-om2 Prerelease pr125-18 with commit 7fbd0d5

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om2, defined in ./spack.yaml, will be deployed to Gadi as:

2025.12.000 as a Release (when merged).
pr125-18 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr125-18

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr125-18 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2817e9e41a6142cb617b216e53c7f3fef5a8da52
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

The goal here is to enable multiple timesteps per history file when using PIO, to be consistent with the access-esm1.6 branch. In the access-esm1.6 branch, this [change](#59) was implemented only when using Netcdf for IO. Closes #58 1. This change relies on latest in ParallelIO (NCAR/ParallelIO#2016). (Updating ParallelIO is not answer changing - [build](ACCESS-NRI/ACCESS-OM2#125) and [repro](ACCESS-NRI/access-om2-configs#205 (comment)) ) 2. This changes the time variable to be in the middle of the averaging interval 3. error handling is added/modified on an as needed basis, rather than comprehensively 4. Output files follow the ocean convention now, e.g _iceh-1monthly-mean_1900.nc_

github-actions · 2025-12-17T22:36:06Z

🚀 Attempted to deploy access-om2 Prerelease pr125-19 with commit e10a727

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om2, defined in ./spack.yaml, will be deployed to Gadi as:

2025.12.000 as a Release (when merged).
pr125-19 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr125-19

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr125-19 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.12.000
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-12-17T22:36:47Z

🚀 Attempted to deploy access-om2 Prerelease pr125-20 with commit 75f8e0c

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om2, defined in ./spack.yaml, will be deployed to Gadi as:

2025.12.000 as a Release (when merged).
pr125-20 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om2/pr125-20

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om2-pr125-20 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.12.000
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

messing around with cmake in cice5

5fdff97

anton-seaice had a problem deploying to Gadi Prerelease November 20, 2025 00:46 — with GitHub Actions Failure

anton-seaice mentioned this pull request Nov 20, 2025

Cice5 package using cmake ACCESS-NRI/access-spack-packages#355

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Possible module projections

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latest master

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io_pio: multiple history timesteps per file ACCESS-NRI/cice5#72

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messing around with cmake in cice5 #125

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Testing for #126

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