From 86fadb6cb27ba3cbe2848622ae0dfb420fb65e01 Mon Sep 17 00:00:00 2001 From: Sven-Thorsten Dietrich Date: Sat, 19 Feb 2022 08:07:09 -0800 Subject: [PATCH] Add epacts download to the help menu - since this ocmmand is implemented already, it might as well be cited in the help menu Signed-off-by: Sven-Thorsten Dietrich --- scripts/epacts | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/scripts/epacts b/scripts/epacts index 6eb4704..7dfa40a 100755 --- a/scripts/epacts +++ b/scripts/epacts @@ -89,6 +89,7 @@ epacts [command] [options] meta Perform meta-analysis across multiple epacts results make-group Create the group information for gene-based testing make-kin Create a kinship matrix + download Download the reference sequence file version prints version Visit http://genome.sph.umich.edu/wiki/EPACTS for more detailed documentation @@ -127,6 +128,13 @@ Perform meta-analysis across multiple epacts results. Type 'epacts meta -help' f =back +=item B + +Download the reference sequence file (currently supports only GRCh37) to run EPACTS with annotation support. + +=back + + =head1 DESCRIPTION B is an efficient and flexible software pipelien for sequence-based