Skip to content

Interface to get tensors from MuData #38

@gtca

Description

@gtca

Downstream applications that use count matrices or embeddings from multiple modalities frequently operate on tensors.
For instance, in the current muon.tl.mofa() interface, there is a way to use or discard observations that are present only in some modalities.

We could consider refactoring that code and implementing these strategies (e.g. obs union with missing data or imputation, obs intersection) as part of the data loader that will make it accessible for all the downstream applications.

Metadata

Metadata

Assignees

No one assigned

    Labels

    enhancementNew feature or request

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions