From f236c6f7addede7735588bcc62c5182e14924104 Mon Sep 17 00:00:00 2001
From: Anandashankar Anil <aanil@users.noreply.github.com>
Date: Thu, 28 Apr 2022 14:07:37 +0200
Subject: [PATCH] Remove unused variable

---
 src/ProcessPairs.cpp | 1 -
 1 file changed, 1 deletion(-)

diff --git a/src/ProcessPairs.cpp b/src/ProcessPairs.cpp
index a320563..5981d17 100644
--- a/src/ProcessPairs.cpp
+++ b/src/ProcessPairs.cpp
@@ -48,7 +48,6 @@ void ProcessBAM::Initialize(std::string bamfilename, int nOfExp, int padd, int r
     bLog << bamfilename << "  opened" << std::endl;
     
     // retrieve 'metadata' from BAM files, these are required by BamWriter
-    const SamHeader header = reader.GetHeader();
     const RefVector references = reader.GetReferenceData();
     
     // Make a map of chr names to RefIDs