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Add unit tests

Add unit tests #356

Triggered via pull request January 8, 2026 16:12
@jan-janssenjan-janssen
synchronize #150
unittests
Status Cancelled
Total duration 3m 50s
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pipeline.yml

on: pull_request
Matrix: unittest_matrix
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16 errors and 18 warnings
unittest_matrix (macos-latest, 3.14)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
unittest_matrix (ubuntu-latest, 3.13)
The strategy configuration was canceled because "unittest_matrix.macos-latest_3_14" failed
unittest_matrix (ubuntu-latest, 3.13)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
unittest_matrix (ubuntu-latest, 3.11)
The strategy configuration was canceled because "unittest_matrix.macos-latest_3_14" failed
unittest_matrix (ubuntu-latest, 3.11)
The operation was canceled.
unittest_matrix (ubuntu-latest, 3.14)
The strategy configuration was canceled because "unittest_matrix.macos-latest_3_14" failed
unittest_matrix (ubuntu-latest, 3.14)
The operation was canceled.
unittest_matrix (ubuntu-latest, 3.12)
The strategy configuration was canceled because "unittest_matrix.macos-latest_3_14" failed
unittest_matrix (ubuntu-latest, 3.12)
The operation was canceled.
unittest_matrix (windows-latest, 3.14)
The strategy configuration was canceled because "unittest_matrix.macos-latest_3_14" failed
unittest_matrix (windows-latest, 3.14)
The operation was canceled.
quantumespresso
The run was canceled by @jan-janssen.
nfdi4ing
The run was canceled by @jan-janssen.
nfdi4ing
The operation was canceled.
quantumespresso
The operation was canceled.
Pipeline
The run was canceled by @jan-janssen.
unittest_matrix (macos-latest, 3.14)
critical libmamba Could not solve for environment specs
unittest_matrix (macos-latest, 3.14)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ pyiron_workflow =0.15.4 * is installable and it requires │ └─ python >=3.11,<3.14 * with the potential options │ ├─ python [3.11.0|3.11.1|...|3.13.9], which can be installed; │ └─ python [3.14.0rc1|3.14.0rc2|3.14.0rc3] would require │ └─ _python_rc =* *, which does not exist (perhaps a missing channel); └─ python =3.14 * is not installable because there are no viable options ├─ python [3.14.0rc1|3.14.0rc2|3.14.0rc3], which cannot be installed (as previously explained); ├─ python [3.14.0|3.14.1|3.14.2] conflicts with any installable versions previously reported; └─ python [3.14.0|3.14.1|3.14.2] would require └─ python_abi =3.14 *_cp314, which requires └─ python =3.14 *_cp314, which conflicts with any installable versions previously reported.
unittest_matrix (macos-latest, 3.14)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
unittest_matrix (ubuntu-latest, 3.13)
critical libmamba Could not solve for environment specs
unittest_matrix (ubuntu-latest, 3.13)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ aiida-workgraph =0.7.6 * is installable and it requires │ └─ aiida-core >=2.7.1,<2.8.dev0 *, which requires │ └─ psutil ~=5.6 * with the potential options │ ├─ psutil [5.8.0|5.9.0|...|5.9.8] would require │ │ └─ python >=3.10,<3.11.0a0 *, which can be installed; │ ├─ psutil [5.9.3|5.9.4|...|5.9.8] would require │ │ └─ python >=3.11,<3.12.0a0 *, which can be installed; │ ├─ psutil [5.9.5|5.9.6|5.9.7|5.9.8] would require │ │ └─ python_abi =3.12 *_cp312, which requires │ │ └─ python =3.12 *_cpython, which can be installed; │ ├─ psutil [5.6.3|5.6.4|...|5.9.8] would require │ │ └─ python >=3.8,<3.9.0a0 *, which can be installed; │ ├─ psutil [5.9.0|5.9.1|...|5.9.5] would require │ │ └─ python_abi ==3.8 *_pypy38_pp73, which requires │ │ └─ python =3.8 *_73_pypy, which can be installed; │ ├─ psutil [5.9.0|5.9.1|...|5.9.8] would require │ │ └─ python_abi ==3.9 *_pypy39_pp73, which requires │ │ └─ python =3.9 *_73_pypy, which can be installed; │ ├─ psutil [5.7.2|5.7.3|...|5.9.8] would require │ │ └─ python >=3.9,<3.10.0a0 *, which can be installed; │ ├─ psutil [5.6.1|5.6.2|...|5.7.0] would require │ │ └─ python >=2.7,<2.8.0a0 *, which can be installed; │ ├─ psutil [5.6.1|5.6.2|...|5.8.0] would require │ │ └─ python >=3.6,<3.7.0a0 *, which can be installed; │ ├─ psutil [5.6.1|5.6.2|...|5.9.3] would require │ │ └─ python >=3.7,<3.8.0a0 *, which can be installed; │ ├─ psutil [5.7.0|5.7.2|5.7.3|5.8.0] would require │ │ └─ python_abi ==3.6 *_pypy36_pp73, which requires │ │ └─ python =3.6 *_73_pypy, which can be installed; │ └─ psutil [5.8.0|5.9.0] would require │ └─ python_abi ==3.7 *_pypy37_pp73, which requires │ └─ python =3.7 *_73_pypy, which can be installed; ├─ cwltool =3.1.20251031082601 * is installable with the potential options │ ├─ cwltool 3.1.20251031082601 would require │ │ └─ python >=3.10,<3.11.0a0 *, which can be installed; │ ├─ cwltool 3.1.20251031082601 would require │ │ └─ python >=3.11,<3.12.0a0 *, which can be installed; │ ├─ cwltool 3.1.20251031082601 would require │ │ └─ python_abi =3.12 *_cp312, which can be installed (as previously explained); │ ├─ cwltool 3.1.20251031082601 would require │ │ ├─ python >=3.13,<3.14.0a0 *, which conflicts with any installable versions previously reported; │ │ └─ python_abi =3.13 *_cp313 with the potential options │ │ ├─ python_abi 3.13 would require │ │ │ └─ python =3.13 *_cpython, which can be installed; │ │ └─ python_abi 3.13 would require │ │ └─ python =3.13 *_cp313, which can be installed; │ └─ cwltool 3.1.20251031082601 would require │ └─ python_abi =3.14 *_cp314, which requires │ └─ python =3.14 *_cp314, which can be installed; └─ python =3.13 * is not installable because it conflicts with any installable versions previously reported.
unittest_matrix (ubuntu-latest, 3.13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
unittest_matrix (ubuntu-latest, 3.11)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
unittest_matrix (ubuntu-latest, 3.14)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
unittest_matrix (ubuntu-latest, 3.12)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
pip_check
warning libmamba [galaxy-util-25.1.dev0-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
pip_check
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
arithmetic
warning libmamba [galaxy-util-25.1.dev0-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
arithmetic
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
nfdi4ing
warning libmamba [galaxy-util-25.1.dev0-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
quantumespresso
warning libmamba [galaxy-util-25.1.dev0-pyhd8ed1ab_0] The following files were already present in the environment: - lib/python3.12/site-packages/galaxy/__init__.py - lib/python3.12/site-packages/galaxy/py.typed
nfdi4ing
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
quantumespresso
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.