diff --git a/kb_python/report/report_matrix.ipynb b/kb_python/report/report_matrix.ipynb index bd8ff86a..b12733a0 100644 --- a/kb_python/report/report_matrix.ipynb +++ b/kb_python/report/report_matrix.ipynb @@ -158,7 +158,7 @@ "sc.pp.normalize_total(adata, target_sum=1e4)\n", "sc.pp.log1p(adata)\n", "pca = PCA(n_components=10)\n", - "pc = pca.fit_transform(adata.X.todense())" + "pc = pca.fit_transform(adata.X.toarray())" ] }, {