From edf80526ef4fb18e9df9b492938beae0a23b2525 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 9 Feb 2026 08:35:18 +0000 Subject: [PATCH 1/2] build(deps): bump aws-actions/configure-aws-credentials from 5 to 6 Bumps [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) from 5 to 6. - [Release notes](https://github.com/aws-actions/configure-aws-credentials/releases) - [Changelog](https://github.com/aws-actions/configure-aws-credentials/blob/main/CHANGELOG.md) - [Commits](https://github.com/aws-actions/configure-aws-credentials/compare/v5...v6) --- updated-dependencies: - dependency-name: aws-actions/configure-aws-credentials dependency-version: '6' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/pathogen-repo-build.yaml | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/.github/workflows/pathogen-repo-build.yaml b/.github/workflows/pathogen-repo-build.yaml index ef31dfc..e355aed 100644 --- a/.github/workflows/pathogen-repo-build.yaml +++ b/.github/workflows/pathogen-repo-build.yaml @@ -283,7 +283,7 @@ jobs: run: | echo "arn=arn:aws:iam::827581582529:role/GitHubActionsRoleNextstrainRepo@${REPO_FULL_NAME#*/}" | tee -a "$GITHUB_OUTPUT" - name: Configure credentials for runtime access to AWS - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -306,7 +306,7 @@ jobs: # outdenting comments to not repeat it with expanded YAML - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -386,7 +386,7 @@ jobs: path: ${{ env.NEXTSTRAIN_GITHUB_DIR }} - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -454,7 +454,7 @@ jobs: path: ${{ env.NEXTSTRAIN_GITHUB_DIR }} - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -523,7 +523,7 @@ jobs: path: ${{ env.NEXTSTRAIN_GITHUB_DIR }} - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -592,7 +592,7 @@ jobs: path: ${{ env.NEXTSTRAIN_GITHUB_DIR }} - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -671,7 +671,7 @@ jobs: path: ${{ env.NEXTSTRAIN_GITHUB_DIR }} - if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} From 624873b0c514b2aec49b0508c39cdbaaa3395b1f Mon Sep 17 00:00:00 2001 From: Victor Lin Date: Tue, 10 Feb 2026 15:02:37 -0800 Subject: [PATCH 2/2] Update source files --- .github/workflows/pathogen-repo-build.yaml.in | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/pathogen-repo-build.yaml.in b/.github/workflows/pathogen-repo-build.yaml.in index 9849f8d..3e0120d 100644 --- a/.github/workflows/pathogen-repo-build.yaml.in +++ b/.github/workflows/pathogen-repo-build.yaml.in @@ -253,7 +253,7 @@ jobs: echo "arn=arn:aws:iam::827581582529:role/GitHubActionsRoleNextstrainRepo@${REPO_FULL_NAME#*/}" | tee -a "$GITHUB_OUTPUT" - name: Configure credentials for runtime access to AWS - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} @@ -280,7 +280,7 @@ jobs: - &setup-aws-batch-credentials if: inputs.runtime == 'aws-batch' name: Configure credentials for GitHub Actions job access to AWS Batch - uses: aws-actions/configure-aws-credentials@v5 + uses: aws-actions/configure-aws-credentials@v6 with: aws-region: us-east-1 aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}