Error building with g++ 9.3

[giesselmann]

Hi,

I'm trying to build GraphMap2 within a Docker with Alpine Linux. I'm running the required make modules && make steps.
The gcc/g++ toolchain is v9.3 and I'm getting the following error. Building with gcc7.5 on my Laptop works fine.
I'm using Graphmap v0.6.4

In file included from codebase/seqlib/src/utility/evalue.cc:10:
codebase/seqlib/src/utility/evalue.h:161:24: error: 'int64_t' was not declared in this scope
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams* eValueParams, double ret_evalue);
| ^~~~~~~
codebase/seqlib/src/utility/evalue.h:161:49: error: 'int64_t' was not declared in this scope
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double ret_evalue);
| ^~~~~~~
codebase/seqlib/src/utility/evalue.h:161:71: error: 'int64_t' was not declared in this scope
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double ret_evalue);
| ^~~~~~~
codebase/seqlib/src/utility/evalue.h:161:94: error: expected primary-expression before 'const'
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double ret_evalue);
| ^~~~~
In file included from codebase/seqlib/src/utility/evalue.cc:10:
codebase/seqlib/src/utility/evalue.h:161:128: error: expected primary-expression before 'double'
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double ret_evalue);
| ^~~~~~
codebase/seqlib/src/utility/evalue.h:161:146: error: expression list treated as compound expression in initializer [-fpermissive]
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double ret_evalue);
| ^
codebase/seqlib/src/utility/evalue.h:163:36: error: 'int64_t' has not been declared
163 | int SetupScorer(char matrix_name, int64_t reference_length, int gap_open, int gap_extend, EValueParams ret_eValueParams);
| ^~~~~~~
codebase/seqlib/src/utility/evalue.cc:278:146: error: 'int CalculateEValueDNA(int64_t, int64_t, int64_t, const EValueParams, double)' redeclared as different kind of entity
278 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams* eValueParams, double ret_evalue) {
| ^
In file included from codebase/seqlib/src/utility/evalue.cc:10:
codebase/seqlib/src/utility/evalue.h:161:5: note: previous declaration 'int CalculateEValueDNA'
161 | int CalculateEValueDNA(int64_t alignment_score, int64_t query_length, int64_t target_length, const EValueParams eValueParams, double *ret_evalue);
| ^~~~~~~~~~~~~~~~~~
make: *** [Makefile:124: obj_linux/codebase/seqlib/src/utility/evalue.o] Error 1

Cheers,

Pay