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MAVEN needs updates #4

@laylagerami

Description

@laylagerami

Since initial development, some updating is required

DONE: CARNIVAL to be upgraded to current bioconductor version (v2.6.2)

To do:

  • Update install script
  • Update server files
  • Test performance with latest solver versions (CBC and CPlex)

Would be nice:

  • Add new Gurobi solver

DONE: MSigDB signatures to be updated to current version (v2022.1)

To do:

  • Fetch new .gmt files
  • Update server file
  • Test enrichment and hyperlinking functions

Documentation to be updated

To do:

  • Update installation instructions
  • Update case study

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