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Add Rust tests and coverage #3

@andrew-titus

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@andrew-titus

Currently, testing is really just integration testing, where we call the Python code and verify the outputs are correct. We should add some tests on the Rust code directly (e.g., verifying alignment matrices are correct), as well as code coverage.

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    rustRelated to the Rust portions of the projecttestingImprovements to testing

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