diff --git a/mudi/interp/aucell.py b/mudi/interp/aucell.py index d601848..9d2530c 100644 --- a/mudi/interp/aucell.py +++ b/mudi/interp/aucell.py @@ -1,5 +1,5 @@ from pyscenic.aucell import aucell -from pyscenic.genesig import GeneSignature +from ctxcore.genesig import GeneSignature import pandas as pd import matplotlib.pyplot as plt import seaborn as sns diff --git a/setup.py b/setup.py index b534c33..244c96d 100644 --- a/setup.py +++ b/setup.py @@ -48,7 +48,8 @@ "ipywidgets", # Added for scanpy, "agutil", "tqdm", - "pyscenic" + "pyscenic", + "ctxcore" ], package_data = { "":[