formatting puzzle

[vpbrendel]

For some proteins, I get the following funny offset in the output (for position 121). Not consistent. Must be a trivial bug somewhere. Volker

query
MPAWPAAAVAKAVPSPSTPPPPHSRGAGRRRLRPCGAKKGPGTDERGATAGGGGVVTRGA
LLRSGAALFALGFVDAGYSGDWSRIGAISKDTEEALKLAAYAVVPLCLAVVFSPSSEDGS
NNT*

gdna
AACCGTTTGCATCGGCGGGAGTGCCAGGTTTTGTCCGTACCTCGCACCCCGAGAGCGTGCAGCGCTCCACGTTCTGCTGCTAACGCACGTGTGGACGAGAAGCAAACACCCAAACACCCAACTACCACCGCGCACACAGCACAGCATGCCGGCGTGGCCCGCCGCCGCCGTCGCCAAGGCCGTCCCGTCCCCGTCCACGCCGCCGCCGCCGCACTCGCGCGGAGCAGTCCGCCGTCGCCTCCGCCCGTGCGGCGCAAAGAAGGGCCCCGGGACCGACGAGCGAGGTGCCACCGCCGGCGGCGGCGGCGTGGTCACCAGGGGCGCCCTCCTGCGGTCCGGCGCCGCTCTCTTCGCGCTCGGCTTCGTCGACGCCGGGTGAGTCGCACGCACGCGCGCGCGCGCGCGCGCTGATGACGGATTTCCATTGCGTTTTGCACCGGTGGTCGATCTGGTCGGTCTCACCCGTTTCGGGGCGGCTTTGCTGCAGGTACAGCGGCGACTGGTCACGCATCGGCGCCATCTCCAAGGACACCGAGGAGGCGCTCAAGCTGGCCGCCTACGCCGTCGTGCCTCTCTGCCTCGCCGTCGTGTTCTCGCCATCGTCGGAAGACGGCAGTAACAACACCTGAATCCTAGGAAGAAGAGCCATGCTGCAGATCATGTAGTCGTCGTGATACCATCATGCTTACGTGTTGTATACTTCGATCGTGATCGCAATGGGCATTTCTTTTGCCTAAGGGGTGTGTTATCAGCAGTGAAAAGTTTTGGCGTGTCACATCGAATATACGAATATAGATTGATAGCAAAACAAATTGCAGATTCCGTCTATAAATTACGAGACGAATTTATTATTTAATTAATCCATCATTAGCAAATATTTACTGTACCACCACATTATCAAATCATAGAACAATTAGGCTTAAAAGATTCATCTCGTAATTTACACACAATCTGTGTAATTAGTTATTTACATTTAATGTGACTGAGTGAAAATTTTTTG

gth -protein query -genomic gdna -species rice > out
more out
$ GenomeThreader 1.7.1
$ Date run: 2021-01-06 14:53:45
$ Arguments: -protein query -genomic gdna -species rice

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Protein Sequence: file=query, description=query

1 MPAWPAAAVA KAVPSPSTPP PPHSRGAGRR RLRPCGAKKG PGTDERGATA GGGGVVTRGA
61 LLRSGAALFA LGFVDAGYSG DWSRIGAISK DTEEALKLAA YAVVPLCLAV VFSPSSEDGS
121 NNT*

Genomic Template: file=gdna, strand=+, from=1, to=926, description=gdna
....