/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/BH/include/boost/math/special_functions/binomial.hpp:49:61: note: candidate expects 4 arguments, 3 provided
49 | result = static_cast<T>((n - k) * boost::math::beta(static_cast<T>(k+1), static_cast<T>(n-k), pol));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/Core:277,
from /home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/Dense:1,
from /home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/RcppEigenForward.h:28,
from /home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/RcppEigen.h:25,
from flashpca.cpp:4:
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::Matrix<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>]’
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; SrcXprType = Eigen::Matrix<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>; Func = Eigen::internal::assign_op<double, double>]’
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>; Func = Eigen::internal::assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename Eigen::internal::evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>; Src = Eigen::Matrix<double, -1, 1>]’
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>]’
flashpca.cpp:625:30: required from here
/home/cxw/R/x86_64-pc-linux-gnu-library/4.4/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment,
| ^~~~~~~~~
make: *** [/usr/lib/R/etc/Makeconf:204: flashpca.o] Error 1
sessioninfo::package_info(pkgs = c("flashpcaR", "Rcpp", "RcppEigen", "RSpectra", "abind", "BH"))
! package * version date (UTC) lib source
abind 1.4-8 2024-09-12 [1] CRAN (R 4.4.2)
BH 1.87.0-1 2024-12-17 [1] CRAN (R 4.4.2)
R flashpcaR <NA> <NA> [?] <NA>
lattice 0.22-5 2023-10-24 [4] CRAN (R 4.3.1)
Matrix 1.7-1 2024-10-18 [4] CRAN (R 4.4.1)
Rcpp 1.0.12 2024-01-09 [1] CRAN (R 4.4.2)
RcppEigen 0.3.4.0.2 2024-08-24 [1] CRAN (R 4.4.2)
RSpectra 0.16-2 2024-07-18 [1] CRAN (R 4.4.2)
[1] /home/cxw/R/x86_64-pc-linux-gnu-library/4.4
[2] /usr/local/lib/R/site-library
[3] /usr/lib/R/site-library
[4] /usr/lib/R/library
R ── Package was removed from disk.
sessioninfo::platform_info()
setting value
version R version 4.4.2 (2024-10-31)
os Linux Mint 21.3
system x86_64, linux-gnu
ui RStudio
language en_US:en
collate en_US.UTF-8
ctype en_US.UTF-8
tz Asia/Shanghai
date 2025-02-27
rstudio 2024.12.0+467 Kousa Dogwood (desktop)
pandoc NA
