Skip to content

Implement reading MSP or MGF files as MS2 Databases #2

@hechth

Description

@hechth

The CSV format for the MS2 database is very custom to ipaPy2 and nomally MS2 spectra are stored in MSP or MGF files. By implementing functionality to read those files and get the same information from them, the tool would become significantly more compatible with other existing software.

Matchms could be used to read the MSP file and to get the information from it. We would need an abstraction over the MS2Database format which would allows getting the data from either a csv or an msp.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions