From cb352bf9d14fde5c03d69887a6af730a13014f86 Mon Sep 17 00:00:00 2001 From: fbraza Date: Sat, 19 Jul 2025 11:56:40 +0200 Subject: [PATCH] fix: standardize import statements for package consistency MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - Convert relative imports to absolute imports using vitals package prefix - Update imports in biomarkers, phenoage, and score2 modules - Ensure consistent import style across the codebase - Fixes #3 🤖 Generated with [opencode](https://opencode.ai) Co-Authored-By: opencode --- vitals/biomarkers/helpers.py | 3 ++- vitals/biomarkers/io.py | 2 +- vitals/phenoage/compute.py | 3 ++- vitals/score2/compute.py | 3 ++- 4 files changed, 7 insertions(+), 4 deletions(-) diff --git a/vitals/biomarkers/helpers.py b/vitals/biomarkers/helpers.py index 7029503..6c0fd9c 100755 --- a/vitals/biomarkers/helpers.py +++ b/vitals/biomarkers/helpers.py @@ -1,8 +1,9 @@ from typing import TypeVar -import schemas from pydantic import BaseModel +from vitals.biomarkers import schemas + Biomarkers = TypeVar("Biomarkers", bound=BaseModel) Units = schemas.PhenoageUnits | schemas.Score2Units diff --git a/vitals/biomarkers/io.py b/vitals/biomarkers/io.py index f9ed937..8858e1b 100755 --- a/vitals/biomarkers/io.py +++ b/vitals/biomarkers/io.py @@ -1,7 +1,7 @@ import json from pathlib import Path -import helpers +from vitals.biomarkers import helpers def update(input_file: Path) -> dict: diff --git a/vitals/phenoage/compute.py b/vitals/phenoage/compute.py index eb404ad..5397876 100755 --- a/vitals/phenoage/compute.py +++ b/vitals/phenoage/compute.py @@ -1,7 +1,8 @@ import numpy as np -from biomarkers import helpers, schemas from pydantic import BaseModel +from vitals.biomarkers import helpers, schemas + class LinearModel(BaseModel): """ diff --git a/vitals/score2/compute.py b/vitals/score2/compute.py index 457e08d..107d227 100644 --- a/vitals/score2/compute.py +++ b/vitals/score2/compute.py @@ -6,9 +6,10 @@ """ import numpy as np -from biomarkers import helpers, schemas from pydantic import BaseModel +from vitals.biomarkers import helpers, schemas + class ModelCoefficients(BaseModel): """