From bc9c591eb67850547c612967f17a50c3ca9cf48e Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Thu, 29 Jan 2026 09:37:02 +0100
Subject: [PATCH 1/8] Move ReaderData to common

---
 packages/common/src/weathergen/common/data.py | 176 ++++++++++++++++++
 packages/common/src/weathergen/common/io.py   |  79 +-------
 .../readers_extra/data_reader_cams.py         |   3 +-
 .../readers_extra/data_reader_eobs.py         |   3 +-
 .../readers_extra/data_reader_icon_esm.py     |   4 +-
 .../readers_extra/data_reader_iconart.py      |   3 +-
 src/weathergen/datasets/data_reader_anemoi.py |   3 +-
 src/weathergen/datasets/data_reader_base.py   | 125 +------------
 src/weathergen/datasets/data_reader_fesom.py  |   3 +-
 src/weathergen/datasets/data_reader_obs.py    |   3 +-
 src/weathergen/datasets/memory_pinning.py     |   8 +-
 .../datasets/multi_stream_data_sampler.py     |   6 +-
 src/weathergen/datasets/stream_data.py        |  12 +-
 src/weathergen/datasets/tokenizer_masking.py  |  12 +-
 src/weathergen/datasets/tokenizer_utils.py    |   4 +-
 15 files changed, 210 insertions(+), 234 deletions(-)
 create mode 100644 packages/common/src/weathergen/common/data.py

diff --git a/packages/common/src/weathergen/common/data.py b/packages/common/src/weathergen/common/data.py
new file mode 100644
index 000000000..ec5696c71
--- /dev/null
+++ b/packages/common/src/weathergen/common/data.py
@@ -0,0 +1,176 @@
+import numpy as np
+from dataclasses import dataclass
+
+type DType = np.float32
+type NPDT64 = datetime64
+
+_logger = logging.getLogger(__name__)
+
+_DT_ZERO = np.datetime64("1850-01-01T00:00")
+
+@dataclass
+class DTRange:
+    """
+    Defines a time window for indexing into datasets.
+
+    It is defined as numpy datetime64 objects.
+    """
+
+    start: NPDT64
+    end: NPDT64
+
+    def __post_init__(self):
+        assert self.start < self.end, "start time must be before end time"
+        assert self.start > _DT_ZERO, "start time must be after 1850-01-01T00:00"
+
+
+class ReaderData:
+    """
+    Wrapper for return values from DataReader.get_source and DataReader.get_target.
+    """
+
+    coords: NDArray[DType]
+    geoinfos: NDArray[DType]
+    data: NDArray[DType]
+    datetimes: NDArray[NPDT64]
+    is_spoof: bool = False
+
+    def empty(num_data_fields: int, num_geo_fields: int) -> "ReaderData":
+        """
+        Create an empty ReaderData object
+
+        Returns
+        -------
+        ReaderData
+            Empty ReaderData object
+        """
+        return ReaderData(
+            coords=np.zeros((0, 2), dtype=np.float32),
+            geoinfos=np.zeros((0, num_geo_fields), dtype=np.float32),
+            data=np.zeros((0, num_data_fields), dtype=np.float32),
+            datetimes=np.zeros((0,), dtype=np.datetime64),
+            is_spoof=False,
+        )
+
+    def is_empty(self):
+        """
+        Test if data object is empty
+        """
+        return len(self) == 0
+
+    def __len__():
+        return len(self.data)
+
+    @classmethod
+    def combine(cls, others: list["ReaderData"]) -> "ReaderData":
+        """
+        Create an instance from data_reader_base.ReaderData instance by combining mulitple ones.
+
+        others is list of ReaderData instances.
+        """
+        assert len(others) > 0, len(others)
+
+        other = others[0]
+        coords = np.zeros((0, other.coords.shape[1]), dtype=other.coords.dtype)
+        geoinfos = np.zeros((0, other.geoinfos.shape[1]), dtype=other.geoinfos.dtype)
+        data = np.zeros((0, other.data.shape[1]), dtype=other.data.dtype)
+        datetimes = np.array([], dtype=other.datetimes.dtype)
+        is_spoof = True
+
+        for other in others:
+            n_datapoints = len(other.data)
+            assert other.coords.shape == (n_datapoints, 2), "number of datapoints do not match"
+            assert other.geoinfos.shape[0] == n_datapoints, "number of datapoints do not match"
+            assert other.datetimes.shape[0] == n_datapoints, "number of datapoints do not match"
+
+            coords = np.concatenate([coords, other.coords])
+            geoinfos = np.concatenate([geoinfos, other.geoinfos])
+            data = np.concatenate([data, other.data])
+            datetimes = np.concatenate([datetimes, other.datetimes])
+            is_spoof = is_spoof and other.is_spoof
+
+        return cls(coords, geoinfos, data, datetimes, is_spoof)
+
+    @classmethod
+    def create(cls, other: typing.Any) -> "ReaderData":
+        """
+        Create an instance from data_reader_base.ReaderData instance.
+
+        other should be such an instance.
+        """
+        coords = np.asarray(other.coords)
+        geoinfos = np.asarray(other.geoinfos)
+        data = np.asarray(other.data)
+        datetimes = np.asarray(other.datetimes)
+
+        n_datapoints = len(data)
+
+        assert coords.shape == (n_datapoints, 2), "number of datapoints do not match data"
+        assert geoinfos.shape[0] == n_datapoints, "number of datapoints do not match data"
+        assert datetimes.shape[0] == n_datapoints, "number of datapoints do not match data"
+
+        return cls(**dataclasses.asdict(other))
+
+    def remove_nan_coords(self) -> "ReaderData":
+        """
+        Remove all data points where coords are NaN
+
+        Returns
+        -------
+        self
+        """
+        idx_valid = ~np.isnan(self.coords)
+        # filter should be if any (of the two) coords is NaN
+        idx_valid = np.logical_and(idx_valid[:, 0], idx_valid[:, 1])
+
+        # apply
+        return ReaderData(
+            self.coords[idx_valid],
+            self.geoinfos[idx_valid],
+            self.data[idx_valid],
+            self.datetimes[idx_valid],
+        )
+
+
+def check_reader_data(rdata: ReaderData, dtr: DTRange) -> None:
+    """
+    Check that ReaderData is valid
+
+    Parameters
+    ----------
+    rdata :
+        ReaderData to check
+    dtr :
+        datetime range of window for which the rdata is valid
+
+    Returns
+    -------
+    None
+    """
+
+    assert rdata.coords.ndim == 2, f"coords must be 2D {rdata.coords.shape}"
+    assert rdata.coords.shape[1] == 2, (
+        f"coords must have 2 columns (lat, lon), got {rdata.coords.shape}"
+    )
+    assert rdata.geoinfos.ndim == 2, f"geoinfos must be 2D, got {rdata.geoinfos.shape}"
+    assert rdata.data.ndim == 2, f"data must be 2D {rdata.data.shape}"
+    assert rdata.datetimes.ndim == 1, f"datetimes must be 1D {rdata.datetimes.shape}"
+
+    assert rdata.coords.shape[0] == rdata.data.shape[0], "coords and data must have same length"
+    assert rdata.geoinfos.shape[0] == rdata.data.shape[0], "geoinfos and data must have same length"
+
+    # Check that all fields have the same length
+    assert (
+        rdata.coords.shape[0]
+        == rdata.geoinfos.shape[0]
+        == rdata.data.shape[0]
+        == rdata.datetimes.shape[0]
+    ), (
+        f"coords, geoinfos, data and datetimes must have the same length "
+        f"{rdata.coords.shape[0]}, {rdata.geoinfos.shape[0]}, {rdata.data.shape[0]}, "
+        f"{rdata.datetimes.shape[0]}"
+    )
+
+    assert np.logical_and(rdata.datetimes >= dtr.start, rdata.datetimes < dtr.end).all(), (
+        f"datetimes for data points violate window {dtr}."
+    )
diff --git a/packages/common/src/weathergen/common/io.py b/packages/common/src/weathergen/common/io.py
index 2243cdee8..aee730904 100644
--- a/packages/common/src/weathergen/common/io.py
+++ b/packages/common/src/weathergen/common/io.py
@@ -27,6 +27,8 @@
 from zarr.errors import ZarrUserWarning
 from zarr.storage import LocalStore, ZipStore
 
+from weathergen.common.data import ReaderData
+
 # experimental value, should be inferred more intelligently
 SHARDING_ENABLED = True
 SHARD_N_SAMPLES = 40320
@@ -119,79 +121,6 @@ def forecast_interval(self, forecast_dt_hours: int, fstep: int) -> "TimeRange":
         return TimeRange(self.start + offset, self.end + offset)
 
 
-@dataclasses.dataclass
-class IOReaderData:
-    """
-    Equivalent to data_reader_base.ReaderData
-
-    This class needs to exist since otherwise the common package would
-    have a dependecy on the core model. Ultimately a unified data model
-    should be implemented in the common package.
-    """
-
-    coords: NDArray[DType]
-    geoinfos: NDArray[DType]
-    data: NDArray[DType]
-    datetimes: NDArray[NPDT64]
-    is_spoof: bool = False
-
-    def is_empty(self):
-        """
-        Test if data object is empty
-        """
-        return len(self.data) == 0
-
-    @classmethod
-    def create(cls, other: typing.Any) -> "IOReaderData":
-        """
-        Create an instance from data_reader_base.ReaderData instance.
-
-        other should be such an instance.
-        """
-        coords = np.asarray(other.coords)
-        geoinfos = np.asarray(other.geoinfos)
-        data = np.asarray(other.data)
-        datetimes = np.asarray(other.datetimes)
-
-        n_datapoints = len(data)
-
-        assert coords.shape == (n_datapoints, 2), "number of datapoints do not match data"
-        assert geoinfos.shape[0] == n_datapoints, "number of datapoints do not match data"
-        assert datetimes.shape[0] == n_datapoints, "number of datapoints do not match data"
-
-        return cls(**dataclasses.asdict(other))
-
-    @classmethod
-    def combine(cls, others: list["IOReaderData"]) -> "IOReaderData":
-        """
-        Create an instance from data_reader_base.ReaderData instance by combining mulitple ones.
-
-        others is list of ReaderData instances.
-        """
-        assert len(others) > 0, len(others)
-
-        other = others[0]
-        coords = np.zeros((0, other.coords.shape[1]), dtype=other.coords.dtype)
-        geoinfos = np.zeros((0, other.geoinfos.shape[1]), dtype=other.geoinfos.dtype)
-        data = np.zeros((0, other.data.shape[1]), dtype=other.data.dtype)
-        datetimes = np.array([], dtype=other.datetimes.dtype)
-        is_spoof = True
-
-        for other in others:
-            n_datapoints = len(other.data)
-            assert other.coords.shape == (n_datapoints, 2), "number of datapoints do not match"
-            assert other.geoinfos.shape[0] == n_datapoints, "number of datapoints do not match"
-            assert other.datetimes.shape[0] == n_datapoints, "number of datapoints do not match"
-
-            coords = np.concatenate([coords, other.coords])
-            geoinfos = np.concatenate([geoinfos, other.geoinfos])
-            data = np.concatenate([data, other.data])
-            datetimes = np.concatenate([datetimes, other.datetimes])
-            is_spoof = is_spoof and other.is_spoof
-
-        return cls(coords, geoinfos, data, datetimes, is_spoof)
-
-
 @dataclasses.dataclass
 class ItemKey:
     """Metadata to identify one output item."""
@@ -555,7 +484,7 @@ class OutputBatchData:
 
     # sample, stream, tensor(datapoint, channel+coords)
     # => datapoints is accross all datasets per stream
-    sources: list[list[IOReaderData]]
+    sources: list[list[ReaderData]]
 
     # sample
     source_intervals: list[TimeRange]
@@ -743,7 +672,7 @@ def _extract_sources(
         channels = self.source_channels[stream_idx]
         geoinfo_channels = self.geoinfo_channels[stream_idx]
 
-        source: IOReaderData = self.sources[sample][stream_idx]
+        source: ReaderData = self.sources[sample][stream_idx]
 
         assert source.data.shape[1] == len(channels), (
             f"Number of source channel names {len(channels)} does not align with source data."
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
index 5f76098f0..5fa3ffbb3 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
@@ -9,11 +9,10 @@
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
-    check_reader_data,
 )
+from weathergen.common.data import ReaderData, check_reader_data
 
 ############################################################################
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
index 4f0157792..ef457290c 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
@@ -17,12 +17,11 @@
 
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
-    check_reader_data,
     str_to_timedelta,
 )
+from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
index d167f4dfd..d2d203822 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
@@ -20,11 +20,11 @@
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
-    check_reader_data,
 )
+from weathergen.common.data import ReaderData, check_reader_data
+
 
 _logger = logging.getLogger(__name__)
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
index 748a3499d..71f62ed73 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
@@ -20,11 +20,10 @@
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
-    check_reader_data,
 )
+from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_anemoi.py b/src/weathergen/datasets/data_reader_anemoi.py
index dad158a56..f7ce0b77d 100644
--- a/src/weathergen/datasets/data_reader_anemoi.py
+++ b/src/weathergen/datasets/data_reader_anemoi.py
@@ -19,11 +19,10 @@
 
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
-    check_reader_data,
 )
+from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_base.py b/src/weathergen/datasets/data_reader_base.py
index 0a31fef3e..0fff1f2ea 100644
--- a/src/weathergen/datasets/data_reader_base.py
+++ b/src/weathergen/datasets/data_reader_base.py
@@ -16,6 +16,7 @@
 from numpy.typing import NDArray
 
 from weathergen.common.config import timedelta_to_str
+from weathergen.common.data import DTRange, ReaderData
 from weathergen.utils.better_abc import ABCMeta, abstract_attribute
 
 _logger = logging.getLogger(__name__)
@@ -48,22 +49,6 @@ class TimeIndexRange:
     end: TIndex
 
 
-@dataclass
-class DTRange:
-    """
-    Defines a time window for indexing into datasets.
-
-    It is defined as numpy datetime64 objects.
-    """
-
-    start: NPDT64
-    end: NPDT64
-
-    def __post_init__(self):
-        assert self.start < self.end, "start time must be before end time"
-        assert self.start > _DT_ZERO, "start time must be after 1850-01-01T00:00"
-
-
 class TimeWindowHandler:
     """
     Handler for time windows and translation of indices to times
@@ -145,114 +130,6 @@ def window(self, idx: TIndex) -> DTRange:
         return DTRange(t_start_win, t_end_win)
 
 
-@dataclass
-class ReaderData:
-    """
-    Wrapper for return values from DataReader.get_source and DataReader.get_target
-    """
-
-    coords: NDArray[DType]
-    geoinfos: NDArray[DType]
-    data: NDArray[DType]
-    datetimes: NDArray[NPDT64]
-    is_spoof: bool = False
-
-    @staticmethod
-    def empty(num_data_fields: int, num_geo_fields: int) -> "ReaderData":
-        """
-        Create an empty ReaderData object
-
-        Returns
-        -------
-        ReaderData
-            Empty ReaderData object
-        """
-        return ReaderData(
-            coords=np.zeros((0, 2), dtype=np.float32),
-            geoinfos=np.zeros((0, num_geo_fields), dtype=np.float32),
-            data=np.zeros((0, num_data_fields), dtype=np.float32),
-            datetimes=np.zeros((0,), dtype=np.datetime64),
-            is_spoof=False,
-        )
-
-    def is_empty(self):
-        return self.len() == 0
-
-    def len(self):
-        """
-        Length of data
-
-        Returns
-        -------
-        length of data
-        """
-        return len(self.data)
-
-    def remove_nan_coords(self) -> "ReaderData":
-        """
-        Remove all data points where coords are NaN
-
-        Returns
-        -------
-        self
-        """
-        idx_valid = ~np.isnan(self.coords)
-        # filter should be if any (of the two) coords is NaN
-        idx_valid = np.logical_and(idx_valid[:, 0], idx_valid[:, 1])
-
-        # apply
-        return ReaderData(
-            self.coords[idx_valid],
-            self.geoinfos[idx_valid],
-            self.data[idx_valid],
-            self.datetimes[idx_valid],
-        )
-
-
-def check_reader_data(rdata: ReaderData, dtr: DTRange) -> None:
-    """
-    Check that ReaderData is valid
-
-    Parameters
-    ----------
-    rdata :
-        ReaderData to check
-    dtr :
-        datetime range of window for which the rdata is valid
-
-    Returns
-    -------
-    None
-    """
-
-    assert rdata.coords.ndim == 2, f"coords must be 2D {rdata.coords.shape}"
-    assert rdata.coords.shape[1] == 2, (
-        f"coords must have 2 columns (lat, lon), got {rdata.coords.shape}"
-    )
-    assert rdata.geoinfos.ndim == 2, f"geoinfos must be 2D, got {rdata.geoinfos.shape}"
-    assert rdata.data.ndim == 2, f"data must be 2D {rdata.data.shape}"
-    assert rdata.datetimes.ndim == 1, f"datetimes must be 1D {rdata.datetimes.shape}"
-
-    assert rdata.coords.shape[0] == rdata.data.shape[0], "coords and data must have same length"
-    assert rdata.geoinfos.shape[0] == rdata.data.shape[0], "geoinfos and data must have same length"
-
-    # Check that all fields have the same length
-    assert (
-        rdata.coords.shape[0]
-        == rdata.geoinfos.shape[0]
-        == rdata.data.shape[0]
-        == rdata.datetimes.shape[0]
-    ), (
-        f"coords, geoinfos, data and datetimes must have the same length "
-        f"{rdata.coords.shape[0]}, {rdata.geoinfos.shape[0]}, {rdata.data.shape[0]}, "
-        f"{rdata.datetimes.shape[0]}"
-    )
-
-    assert np.logical_and(rdata.datetimes >= dtr.start, rdata.datetimes < dtr.end).all(), (
-        f"datetimes for data points violate window {dtr}."
-    )
-
-
 class DataReaderBase(metaclass=ABCMeta):
     """
     Base class for data readers.
diff --git a/src/weathergen/datasets/data_reader_fesom.py b/src/weathergen/datasets/data_reader_fesom.py
index db46bdf73..ab50a2b86 100644
--- a/src/weathergen/datasets/data_reader_fesom.py
+++ b/src/weathergen/datasets/data_reader_fesom.py
@@ -19,13 +19,12 @@
 
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
-    DTRange,
     NDArray,
-    ReaderData,
     TimeWindowHandler,
     TIndex,
     t_epsilon,
 )
+from weathergen.common.data import DTRange, ReaderData
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_obs.py b/src/weathergen/datasets/data_reader_obs.py
index 139a6aa7e..024aa66ca 100644
--- a/src/weathergen/datasets/data_reader_obs.py
+++ b/src/weathergen/datasets/data_reader_obs.py
@@ -17,10 +17,9 @@
 
 from weathergen.datasets.data_reader_base import (
     DataReaderBase,
-    ReaderData,
     TimeWindowHandler,
-    check_reader_data,
 )
+from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/memory_pinning.py b/src/weathergen/datasets/memory_pinning.py
index da69e6e48..961c6f54f 100644
--- a/src/weathergen/datasets/memory_pinning.py
+++ b/src/weathergen/datasets/memory_pinning.py
@@ -2,7 +2,7 @@
 
 import torch
 
-from weathergen.common.io import IOReaderData
+from weathergen.common.data import ReaderData
 
 
 @runtime_checkable
@@ -20,13 +20,13 @@ class Pinnable(Protocol):
     def pin_memory(self): ...
 
 
-def pin_object(obj: Pinnable | torch.Tensor | IOReaderData | list | dict | None):
+def pin_object(obj: Pinnable | torch.Tensor | ReaderData | list | dict | None):
     if obj is None:
         return
     elif isinstance(obj, torch.Tensor | Pinnable):
         obj.pin_memory()
-    elif isinstance(obj, IOReaderData):
-        # Special case: IOReaderData is in common package and can't have torch deps
+    elif isinstance(obj, ReaderData):
+        # Special case: ReaderData is in common package and can't have torch deps
         # Note: These SHOULD be numpy arrays per the type hints, but might be tensors
         pin_object(obj.coords)
         pin_object(obj.data)
diff --git a/src/weathergen/datasets/multi_stream_data_sampler.py b/src/weathergen/datasets/multi_stream_data_sampler.py
index 29723811f..7b2a70a2a 100644
--- a/src/weathergen/datasets/multi_stream_data_sampler.py
+++ b/src/weathergen/datasets/multi_stream_data_sampler.py
@@ -14,7 +14,7 @@
 import torch
 
 from weathergen.common.config import Config
-from weathergen.common.io import IOReaderData
+from weathergen.common.io import ReaderData
 from weathergen.datasets.batch import ModelBatch
 from weathergen.datasets.data_reader_anemoi import DataReaderAnemoi
 from weathergen.datasets.data_reader_base import (
@@ -41,7 +41,7 @@
 logger = logging.getLogger(__name__)
 
 
-def collect_datasources(stream_datasets: list, idx: int, type: str) -> IOReaderData:
+def collect_datasources(stream_datasets: list, idx: int, type: str) -> ReaderData:
     """
     Utility function to collect all sources / targets from streams list
     """
@@ -64,7 +64,7 @@ def collect_datasources(stream_datasets: list, idx: int, type: str) -> IOReaderD
         rdata.geoinfos = ds.normalize_geoinfos(rdata.geoinfos)
         rdatas += [rdata]
 
-    return IOReaderData.combine(rdatas)
+    return ReaderData.combine(rdatas)
 
 
 class MultiStreamDataSampler(torch.utils.data.IterableDataset):
diff --git a/src/weathergen/datasets/stream_data.py b/src/weathergen/datasets/stream_data.py
index da6ab67ca..60ca03201 100644
--- a/src/weathergen/datasets/stream_data.py
+++ b/src/weathergen/datasets/stream_data.py
@@ -11,7 +11,7 @@
 import numpy as np
 import torch
 
-from weathergen.common.io import IOReaderData
+from weathergen.common.io import ReaderData
 
 
 def _pin_tensor(tensor: torch.Tensor) -> torch.Tensor:
@@ -123,7 +123,7 @@ def pin_memory(self):
         self.source_idxs_embed = _pin_tensor_list(self.source_idxs_embed)
         self.source_idxs_embed_pe = _pin_tensor_list(self.source_idxs_embed_pe)
 
-        # Pin source_raw (list of IOReaderData objects)
+        # Pin source_raw (list of ReaderData objects)
         if hasattr(self, "source_raw"):
             for raw_data in self.source_raw:
                 if raw_data is not None and hasattr(raw_data, "pin_memory"):
@@ -165,14 +165,14 @@ def to_device(self, device: str) -> None:
         return self
 
     def add_source(
-        self, step: int, ss_raw: IOReaderData, ss_lens: torch.Tensor, ss_cells: list
+        self, step: int, ss_raw: ReaderData, ss_lens: torch.Tensor, ss_cells: list
     ) -> None:
         """
         Add data for source for one input.
 
         Parameters
         ----------
-        ss_raw : IOReaderData( dataclass containing coords, geoinfos, data, and datetimes )
+        ss_raw : ReaderData( dataclass containing coords, geoinfos, data, and datetimes )
         ss_lens : torch.Tensor( number of healpix cells )
         ss_cells : list( number of healpix cells )
             [ torch.Tensor( tokens per cell, token size, number of channels) ]
@@ -374,7 +374,7 @@ def get_forecast_steps(self) -> int:
         return self.forecast_steps
 
 
-def spoof(healpix_level: int, datetime, geoinfo_size, mean_of_data) -> IOReaderData:
+def spoof(healpix_level: int, datetime, geoinfo_size, mean_of_data) -> ReaderData:
     """
     Spoof an instance from data_reader_base.ReaderData instance.
     other should be such an instance.
@@ -410,4 +410,4 @@ def spoof(healpix_level: int, datetime, geoinfo_size, mean_of_data) -> IOReaderD
         (n_datapoints,),
     )
 
-    return IOReaderData(coords, geoinfos, data, datetimes)
+    return ReaderData(coords, geoinfos, data, datetimes)
diff --git a/src/weathergen/datasets/tokenizer_masking.py b/src/weathergen/datasets/tokenizer_masking.py
index f6cb9ed24..1ffcd3684 100644
--- a/src/weathergen/datasets/tokenizer_masking.py
+++ b/src/weathergen/datasets/tokenizer_masking.py
@@ -11,7 +11,7 @@
 import numpy as np
 import torch
 
-from weathergen.common.io import IOReaderData
+from weathergen.common.io import ReaderData
 from weathergen.datasets.batch import SampleMetaData
 from weathergen.datasets.masking import Masker
 from weathergen.datasets.tokenizer import Tokenizer
@@ -25,7 +25,7 @@
 )
 
 
-def readerdata_to_torch(rdata: IOReaderData) -> IOReaderData:
+def readerdata_to_torch(rdata: ReaderData) -> ReaderData:
     """
     Convert data, coords, and geoinfos to torch tensor
     """
@@ -114,7 +114,7 @@ def cell_to_token_mask(self, idxs_cells, idxs_cells_lens, mask):
     def get_source(
         self,
         stream_info: dict,
-        rdata: IOReaderData,
+        rdata: ReaderData,
         idxs_cells_data,
         time_win: tuple,
         cell_mask: torch.Tensor,
@@ -157,7 +157,7 @@ def get_target(
         self,
         stream_info: dict,
         sampling_rate_target: float,
-        rdata: IOReaderData,
+        rdata: ReaderData,
         token_data,
         time_win: tuple,
         mask_state: dict | None = None,
@@ -197,7 +197,7 @@ def get_target(
     def get_target_coords(
         self,
         stream_info: dict,
-        rdata: IOReaderData,
+        rdata: ReaderData,
         token_data,
         time_win: tuple,
         cell_mask,
@@ -256,7 +256,7 @@ def get_target_coords(
     def get_target_values(
         self,
         stream_info: dict,
-        rdata: IOReaderData,
+        rdata: ReaderData,
         token_data,
         time_win: tuple,
         cell_mask,
diff --git a/src/weathergen/datasets/tokenizer_utils.py b/src/weathergen/datasets/tokenizer_utils.py
index fc61b1b02..d2d632766 100644
--- a/src/weathergen/datasets/tokenizer_utils.py
+++ b/src/weathergen/datasets/tokenizer_utils.py
@@ -4,7 +4,7 @@
 from astropy_healpix.healpy import ang2pix
 from torch import Tensor
 
-from weathergen.common.io import IOReaderData
+from weathergen.common.data import ReaderData
 from weathergen.datasets.utils import (
     locs_to_cell_coords_ctrs,
     locs_to_ctr_coords,
@@ -209,7 +209,7 @@ def tokenize_spacetime(
     for _, t in enumerate(t_unique):
         # data for current time step
         mask = t == rdata.datetimes
-        rdata_cur = IOReaderData(
+        rdata_cur = ReaderData(
             rdata.coords[mask], rdata.geoinfos[mask], rdata.data[mask], rdata.datetimes[mask]
         )
         idxs_cur, idxs_cur_lens = tokenize_space(rdata_cur, token_size, hl, pad_tokens)

From a2e7dd314f55ffe3e335b1e3157e26d275046bbd Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Thu, 29 Jan 2026 10:00:39 +0100
Subject: [PATCH 2/8] linting

---
 packages/common/src/weathergen/common/data.py    |  4 +++-
 .../src/weathergen/evaluate/io/wegen_reader.py   |  2 +-
 .../src/weathergen/evaluate/plotting/plotter.py  | 16 +++++-----------
 .../src/weathergen/evaluate/utils/utils.py       |  2 +-
 .../weathergen/readers_extra/data_reader_cams.py |  2 +-
 .../weathergen/readers_extra/data_reader_eobs.py |  2 +-
 .../readers_extra/data_reader_icon_esm.py        |  3 +--
 .../readers_extra/data_reader_iconart.py         |  2 +-
 src/weathergen/datasets/data_reader_anemoi.py    |  2 +-
 src/weathergen/datasets/data_reader_fesom.py     |  2 +-
 src/weathergen/datasets/data_reader_obs.py       |  2 +-
 11 files changed, 17 insertions(+), 22 deletions(-)

diff --git a/packages/common/src/weathergen/common/data.py b/packages/common/src/weathergen/common/data.py
index ec5696c71..5c58ea1ed 100644
--- a/packages/common/src/weathergen/common/data.py
+++ b/packages/common/src/weathergen/common/data.py
@@ -1,6 +1,7 @@
-import numpy as np
 from dataclasses import dataclass
 
+import numpy as np
+
 type DType = np.float32
 type NPDT64 = datetime64
 
@@ -8,6 +9,7 @@
 
 _DT_ZERO = np.datetime64("1850-01-01T00:00")
 
+
 @dataclass
 class DTRange:
     """
diff --git a/packages/evaluate/src/weathergen/evaluate/io/wegen_reader.py b/packages/evaluate/src/weathergen/evaluate/io/wegen_reader.py
index 03045f72d..eb4672fd7 100644
--- a/packages/evaluate/src/weathergen/evaluate/io/wegen_reader.py
+++ b/packages/evaluate/src/weathergen/evaluate/io/wegen_reader.py
@@ -693,7 +693,7 @@ def _force_consistent_grids(ref: list[xr.DataArray]) -> xr.DataArray:
             a_sorted = a_sorted.expand_dims(sample=[i])
 
         aligned.append(a_sorted)
-    
+
     return xr.concat(aligned, dim="sample").assign_coords({"sample": samples})
 
 
diff --git a/packages/evaluate/src/weathergen/evaluate/plotting/plotter.py b/packages/evaluate/src/weathergen/evaluate/plotting/plotter.py
index c991e01fb..2d311dc44 100644
--- a/packages/evaluate/src/weathergen/evaluate/plotting/plotter.py
+++ b/packages/evaluate/src/weathergen/evaluate/plotting/plotter.py
@@ -1539,12 +1539,8 @@ def plot(
             runs = [""] + runs
             data = [ones_array] + data
 
-
         for run_index in range(1, len(runs)):
-
-            score, channels_per_comparison = self.calc_ratio_per_run_id(
-                data, channels, run_index
-            )
+            score, channels_per_comparison = self.calc_ratio_per_run_id(data, channels, run_index)
             if len(score) > 0:
                 ax[run_index - 1].barh(
                     np.arange(len(score)),
@@ -1554,9 +1550,7 @@ def plot(
                     edgecolor="black",
                     linewidth=0.5,
                 )
-                ax[run_index - 1].set_yticks(
-                    np.arange(len(score)), labels=channels_per_comparison
-                )
+                ax[run_index - 1].set_yticks(np.arange(len(score)), labels=channels_per_comparison)
                 ax[run_index - 1].invert_yaxis()
 
                 xlabel = (
@@ -1625,7 +1619,7 @@ def calc_ratio_per_run_id(
         """
         ratio_score = []
         channels_per_comparison = []
-        
+
         for _, var in enumerate(channels):
             if var not in data[0].channel.values or var not in data[run_index].channel.values:
                 continue
@@ -1636,12 +1630,12 @@ def calc_ratio_per_run_id(
             baseline_score, model_score = calculate_average_over_dim(x_dim, baseline_var, data_var)
 
             ratio_score.append(model_score / baseline_score)
-        
+
         if np.allclose(baseline_score, 1.0, atol=1e-6):
             ratio_score = np.array(ratio_score)
         else:
             ratio_score = np.array(ratio_score) - 1
-        
+
         return ratio_score, channels_per_comparison
 
     def colors(self, ratio_score: np.array, metric: str) -> list[tuple]:
diff --git a/packages/evaluate/src/weathergen/evaluate/utils/utils.py b/packages/evaluate/src/weathergen/evaluate/utils/utils.py
index 58dcb33a6..d911a370b 100644
--- a/packages/evaluate/src/weathergen/evaluate/utils/utils.py
+++ b/packages/evaluate/src/weathergen/evaluate/utils/utils.py
@@ -199,7 +199,7 @@ def calc_scores_per_stream(
             }
             if "ens" in combined_metrics.dims:
                 criteria["ens"] = combined_metrics.ens.values
-        
+
             metric_stream.loc[criteria] = combined_metrics
 
             lead_time_map[fstep] = (
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
index 5fa3ffbb3..227f77551 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_cams.py
@@ -6,13 +6,13 @@
 import numpy as np
 import xarray as xr
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     TimeWindowHandler,
     TIndex,
 )
-from weathergen.common.data import ReaderData, check_reader_data
 
 ############################################################################
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
index ef457290c..470f2993e 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_eobs.py
@@ -15,13 +15,13 @@
 import xarray as xr
 from numpy.typing import NDArray
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     TimeWindowHandler,
     TIndex,
     str_to_timedelta,
 )
-from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
index d2d203822..8d12d70e4 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_icon_esm.py
@@ -17,14 +17,13 @@
 import xarray as xr
 import zarr
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     TimeWindowHandler,
     TIndex,
 )
-from weathergen.common.data import ReaderData, check_reader_data
-
 
 _logger = logging.getLogger(__name__)
 
diff --git a/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py b/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
index 71f62ed73..afe8a4fe5 100644
--- a/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
+++ b/packages/readers_extra/src/weathergen/readers_extra/data_reader_iconart.py
@@ -17,13 +17,13 @@
 import xarray as xr
 from numpy.typing import NDArray
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_anemoi import _clip_lat, _clip_lon
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     TimeWindowHandler,
     TIndex,
 )
-from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_anemoi.py b/src/weathergen/datasets/data_reader_anemoi.py
index f7ce0b77d..9a065740e 100644
--- a/src/weathergen/datasets/data_reader_anemoi.py
+++ b/src/weathergen/datasets/data_reader_anemoi.py
@@ -17,12 +17,12 @@
 from anemoi.datasets.data.dataset import Dataset
 from numpy.typing import NDArray
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     TimeWindowHandler,
     TIndex,
 )
-from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_fesom.py b/src/weathergen/datasets/data_reader_fesom.py
index ab50a2b86..c138e1fba 100644
--- a/src/weathergen/datasets/data_reader_fesom.py
+++ b/src/weathergen/datasets/data_reader_fesom.py
@@ -17,6 +17,7 @@
 import numpy as np
 import zarr
 
+from weathergen.common.data import DTRange, ReaderData
 from weathergen.datasets.data_reader_base import (
     DataReaderTimestep,
     NDArray,
@@ -24,7 +25,6 @@
     TIndex,
     t_epsilon,
 )
-from weathergen.common.data import DTRange, ReaderData
 
 _logger = logging.getLogger(__name__)
 
diff --git a/src/weathergen/datasets/data_reader_obs.py b/src/weathergen/datasets/data_reader_obs.py
index 024aa66ca..506102c6f 100644
--- a/src/weathergen/datasets/data_reader_obs.py
+++ b/src/weathergen/datasets/data_reader_obs.py
@@ -15,11 +15,11 @@
 import numpy as np
 import zarr
 
+from weathergen.common.data import ReaderData, check_reader_data
 from weathergen.datasets.data_reader_base import (
     DataReaderBase,
     TimeWindowHandler,
 )
-from weathergen.common.data import ReaderData, check_reader_data
 
 _logger = logging.getLogger(__name__)
 

From 04502bebc4027617067c7793aa891dcb404aab76 Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Thu, 29 Jan 2026 10:15:03 +0100
Subject: [PATCH 3/8] linter fixes

---
 packages/common/src/weathergen/common/data.py | 60 ++++++++++---------
 1 file changed, 33 insertions(+), 27 deletions(-)

diff --git a/packages/common/src/weathergen/common/data.py b/packages/common/src/weathergen/common/data.py
index 5c58ea1ed..d5caaf2e9 100644
--- a/packages/common/src/weathergen/common/data.py
+++ b/packages/common/src/weathergen/common/data.py
@@ -1,6 +1,10 @@
-from dataclasses import dataclass
+import dataclasses
+import logging
+from typing import Any
 
 import numpy as np
+from numpy import datetime64
+from numpy.typing import NDArray
 
 type DType = np.float32
 type NPDT64 = datetime64
@@ -10,7 +14,7 @@
 _DT_ZERO = np.datetime64("1850-01-01T00:00")
 
 
-@dataclass
+@dataclasses.dataclass
 class DTRange:
     """
     Defines a time window for indexing into datasets.
@@ -26,6 +30,7 @@ def __post_init__(self):
         assert self.start > _DT_ZERO, "start time must be after 1850-01-01T00:00"
 
 
+@dataclasses.dataclass
 class ReaderData:
     """
     Wrapper for return values from DataReader.get_source and DataReader.get_target.
@@ -37,30 +42,7 @@ class ReaderData:
     datetimes: NDArray[NPDT64]
     is_spoof: bool = False
 
-    def empty(num_data_fields: int, num_geo_fields: int) -> "ReaderData":
-        """
-        Create an empty ReaderData object
-
-        Returns
-        -------
-        ReaderData
-            Empty ReaderData object
-        """
-        return ReaderData(
-            coords=np.zeros((0, 2), dtype=np.float32),
-            geoinfos=np.zeros((0, num_geo_fields), dtype=np.float32),
-            data=np.zeros((0, num_data_fields), dtype=np.float32),
-            datetimes=np.zeros((0,), dtype=np.datetime64),
-            is_spoof=False,
-        )
-
-    def is_empty(self):
-        """
-        Test if data object is empty
-        """
-        return len(self) == 0
-
-    def __len__():
+    def __len__(self):
         return len(self.data)
 
     @classmethod
@@ -94,7 +76,7 @@ def combine(cls, others: list["ReaderData"]) -> "ReaderData":
         return cls(coords, geoinfos, data, datetimes, is_spoof)
 
     @classmethod
-    def create(cls, other: typing.Any) -> "ReaderData":
+    def create(cls, other: Any) -> "ReaderData":
         """
         Create an instance from data_reader_base.ReaderData instance.
 
@@ -113,6 +95,30 @@ def create(cls, other: typing.Any) -> "ReaderData":
 
         return cls(**dataclasses.asdict(other))
 
+    @staticmethod
+    def empty(num_data_fields: int, num_geo_fields: int) -> "ReaderData":
+        """
+        Create an empty ReaderData object
+
+        Returns
+        -------
+        ReaderData
+            Empty ReaderData object
+        """
+        return ReaderData(
+            coords=np.zeros((0, 2), dtype=np.float32),
+            geoinfos=np.zeros((0, num_geo_fields), dtype=np.float32),
+            data=np.zeros((0, num_data_fields), dtype=np.float32),
+            datetimes=np.zeros((0,), dtype=np.datetime64),
+            is_spoof=False,
+        )
+
+    def is_empty(self):
+        """
+        Test if data object is empty
+        """
+        return len(self) == 0
+
     def remove_nan_coords(self) -> "ReaderData":
         """
         Remove all data points where coords are NaN

From ebd2cee4e9f1753f80a7b59bf8ef6ba3b6c30f41 Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Thu, 29 Jan 2026 11:09:49 +0100
Subject: [PATCH 4/8] add license

---
 packages/common/src/weathergen/common/data.py | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/packages/common/src/weathergen/common/data.py b/packages/common/src/weathergen/common/data.py
index d5caaf2e9..fcf22650a 100644
--- a/packages/common/src/weathergen/common/data.py
+++ b/packages/common/src/weathergen/common/data.py
@@ -1,3 +1,12 @@
+# (C) Copyright 2025 WeatherGenerator contributors.
+#
+# This software is licensed under the terms of the Apache Licence Version 2.0
+# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
+#
+# In applying this licence, ECMWF does not waive the privileges and immunities
+# granted to it by virtue of its status as an intergovernmental organisation
+# nor does it submit to any jurisdiction.
+
 import dataclasses
 import logging
 from typing import Any

From 6cdec1aab943e0ef1fc0b8fe87bf12ce510773b3 Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Fri, 30 Jan 2026 09:45:22 +0100
Subject: [PATCH 5/8] refactoring

---
 packages/common/src/weathergen/common/data.py | 122 ++++++++++++------
 .../datasets/multi_stream_data_sampler.py     |   2 +-
 2 files changed, 82 insertions(+), 42 deletions(-)

diff --git a/packages/common/src/weathergen/common/data.py b/packages/common/src/weathergen/common/data.py
index fcf22650a..e9286b9e7 100644
--- a/packages/common/src/weathergen/common/data.py
+++ b/packages/common/src/weathergen/common/data.py
@@ -9,7 +9,6 @@
 
 import dataclasses
 import logging
-from typing import Any
 
 import numpy as np
 from numpy import datetime64
@@ -35,8 +34,10 @@ class DTRange:
     end: NPDT64
 
     def __post_init__(self):
-        assert self.start < self.end, "start time must be before end time"
-        assert self.start > _DT_ZERO, "start time must be after 1850-01-01T00:00"
+        if self.start >= self.end:
+            raise ValueError("start time must be before end time")
+        if self.start <= _DT_ZERO:
+            raise ValueError("start time must be after 1850-01-01T00:00")
 
 
 @dataclasses.dataclass
@@ -55,42 +56,26 @@ def __len__(self):
         return len(self.data)
 
     @classmethod
-    def combine(cls, others: list["ReaderData"]) -> "ReaderData":
-        """
-        Create an instance from data_reader_base.ReaderData instance by combining mulitple ones.
-
-        others is list of ReaderData instances.
+    def create(cls, other: "ReaderData") -> "ReaderData":
         """
-        assert len(others) > 0, len(others)
-
-        other = others[0]
-        coords = np.zeros((0, other.coords.shape[1]), dtype=other.coords.dtype)
-        geoinfos = np.zeros((0, other.geoinfos.shape[1]), dtype=other.geoinfos.dtype)
-        data = np.zeros((0, other.data.shape[1]), dtype=other.data.dtype)
-        datetimes = np.array([], dtype=other.datetimes.dtype)
-        is_spoof = True
-
-        for other in others:
-            n_datapoints = len(other.data)
-            assert other.coords.shape == (n_datapoints, 2), "number of datapoints do not match"
-            assert other.geoinfos.shape[0] == n_datapoints, "number of datapoints do not match"
-            assert other.datetimes.shape[0] == n_datapoints, "number of datapoints do not match"
-
-            coords = np.concatenate([coords, other.coords])
-            geoinfos = np.concatenate([geoinfos, other.geoinfos])
-            data = np.concatenate([data, other.data])
-            datetimes = np.concatenate([datetimes, other.datetimes])
-            is_spoof = is_spoof and other.is_spoof
+        Create an instance from another ReaderData instance.
 
-        return cls(coords, geoinfos, data, datetimes, is_spoof)
+        Parameters
+        ------
+            other: ReaderData
+                Input data.
 
-    @classmethod
-    def create(cls, other: Any) -> "ReaderData":
+        Returns
+        ------
+            ReaderData:
+                Has the same underlying data as `other`.
         """
-        Create an instance from data_reader_base.ReaderData instance.
+        if other is None:
+            raise TypeError("Input cannot be None.")
+
+        if not isinstance(other, ReaderData):
+            raise TypeError(f"Expected input of type ReaderData. Got {type(other)}")
 
-        other should be such an instance.
-        """
         coords = np.asarray(other.coords)
         geoinfos = np.asarray(other.geoinfos)
         data = np.asarray(other.data)
@@ -104,11 +89,62 @@ def create(cls, other: Any) -> "ReaderData":
 
         return cls(**dataclasses.asdict(other))
 
+    @classmethod
+    def combine(cls, others: list["ReaderData"]) -> "ReaderData":
+        """
+        Create an instance from ReaderData instance by combining multiple ones.
+
+        Parameters
+        ------
+            others: list[ReaderData]
+                A list of input datas to combine.
+
+        Returns
+        ------
+            ReaderData
+                Instance with concatenated input data.
+        """
+        if others is None:
+            raise TypeError("Input cannot be None.")
+
+        if not isinstance(others, list):
+            raise TypeError(f"Input must be a List. Got {type(others)}")
+
+        assert len(others) > 0, len(others)
+
+        first = others[0]
+        coords = np.zeros((0, first.coords.shape[1]), dtype=first.coords.dtype)
+        geoinfos = np.zeros((0, first.geoinfos.shape[1]), dtype=first.geoinfos.dtype)
+        data = np.zeros((0, first.data.shape[1]), dtype=first.data.dtype)
+        datetimes = np.array([], dtype=first.datetimes.dtype)
+        is_spoof = True
+
+        for item in others:
+            n_datapoints = len(item.data)
+            assert item.coords.shape == (n_datapoints, 2), "number of datapoints do not match"
+            assert item.geoinfos.shape[0] == n_datapoints, "number of datapoints do not match"
+            assert item.datetimes.shape[0] == n_datapoints, "number of datapoints do not match"
+
+            coords = np.concatenate([coords, item.coords])
+            geoinfos = np.concatenate([geoinfos, item.geoinfos])
+            data = np.concatenate([data, item.data])
+            datetimes = np.concatenate([datetimes, item.datetimes])
+            is_spoof = is_spoof and item.is_spoof
+
+        return cls(coords, geoinfos, data, datetimes, is_spoof)
+
     @staticmethod
     def empty(num_data_fields: int, num_geo_fields: int) -> "ReaderData":
         """
         Create an empty ReaderData object
 
+        Parameters
+        ------
+            num_data_fields: int
+                Number of data fields.
+            num_geo_fields:
+                Number of geo fields.
+
         Returns
         -------
         ReaderData
@@ -134,18 +170,18 @@ def remove_nan_coords(self) -> "ReaderData":
 
         Returns
         -------
-        self
+        ReaderData
         """
-        idx_valid = ~np.isnan(self.coords)
-        # filter should be if any (of the two) coords is NaN
-        idx_valid = np.logical_and(idx_valid[:, 0], idx_valid[:, 1])
+        # Identify valid coordinates (where both lat/lon are not NaN)
+        idx_valid = ~np.isnan(self.coords).any(axis=1)
 
-        # apply
+        # Apply filtering
         return ReaderData(
             self.coords[idx_valid],
             self.geoinfos[idx_valid],
             self.data[idx_valid],
             self.datetimes[idx_valid],
+            self.is_spoof,
         )
 
 
@@ -165,6 +201,7 @@ def check_reader_data(rdata: ReaderData, dtr: DTRange) -> None:
     None
     """
 
+    # Validate dimensions
     assert rdata.coords.ndim == 2, f"coords must be 2D {rdata.coords.shape}"
     assert rdata.coords.shape[1] == 2, (
         f"coords must have 2 columns (lat, lon), got {rdata.coords.shape}"
@@ -173,8 +210,10 @@ def check_reader_data(rdata: ReaderData, dtr: DTRange) -> None:
     assert rdata.data.ndim == 2, f"data must be 2D {rdata.data.shape}"
     assert rdata.datetimes.ndim == 1, f"datetimes must be 1D {rdata.datetimes.shape}"
 
-    assert rdata.coords.shape[0] == rdata.data.shape[0], "coords and data must have same length"
-    assert rdata.geoinfos.shape[0] == rdata.data.shape[0], "geoinfos and data must have same length"
+    # Validate consistency of lengths
+    n_points = rdata.coords.shape[0]
+    assert n_points == rdata.data.shape[0], "coords and data must have same length"
+    assert n_points == rdata.geoinfos.shape[0], "geoinfos and data must have same length"
 
     # Check that all fields have the same length
     assert (
@@ -188,6 +227,7 @@ def check_reader_data(rdata: ReaderData, dtr: DTRange) -> None:
         f"{rdata.datetimes.shape[0]}"
     )
 
+    # Check that all datetimes fall within the specified range
     assert np.logical_and(rdata.datetimes >= dtr.start, rdata.datetimes < dtr.end).all(), (
         f"datetimes for data points violate window {dtr}."
     )
diff --git a/src/weathergen/datasets/multi_stream_data_sampler.py b/src/weathergen/datasets/multi_stream_data_sampler.py
index 7b2a70a2a..f7b1eb016 100644
--- a/src/weathergen/datasets/multi_stream_data_sampler.py
+++ b/src/weathergen/datasets/multi_stream_data_sampler.py
@@ -14,7 +14,7 @@
 import torch
 
 from weathergen.common.config import Config
-from weathergen.common.io import ReaderData
+from weathergen.common.data import ReaderData
 from weathergen.datasets.batch import ModelBatch
 from weathergen.datasets.data_reader_anemoi import DataReaderAnemoi
 from weathergen.datasets.data_reader_base import (

From 7a0f7f9c1031ec0fff627d42ca9ea23c802c04d8 Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Mon, 2 Feb 2026 15:27:09 +0100
Subject: [PATCH 6/8] Delete uv.lock

---
 uv.lock | 3350 -------------------------------------------------------
 1 file changed, 3350 deletions(-)
 delete mode 100644 uv.lock

diff --git a/uv.lock b/uv.lock
deleted file mode 100644
index 491002ade..000000000
--- a/uv.lock
+++ /dev/null
@@ -1,3350 +0,0 @@
-version = 1
-revision = 3
-requires-python = "==3.12.*"
-resolution-markers = [
-    "platform_machine == 'aarch64' and sys_platform == 'linux'",
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-]
-conflicts = [[
-    { package = "weathergen", extra = "cpu" },
-    { package = "weathergen", extra = "gpu" },
-]]
-
-[manifest]
-members = [
-    "weathergen",
-    "weathergen-common",
-    "weathergen-evaluate",
-    "weathergen-metrics",
-    "weathergen-readers-extra",
-]
-
-[[package]]
-name = "absl-py"
-version = "2.3.1"
-source = { registry = "https://pypi.org/simple" }
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-]
-
-[[package]]
-name = "anemoi-datasets"
-version = "0.5.29.dev42+ge254d878e"
-source = { git = "https://github.com/ecmwf/anemoi-datasets?branch=feature%2Fzarr3#e254d878eb9154b6414955f6f56dfad2cf8fdf39" }
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-[package.metadata.requires-dev]
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-[package.metadata]
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From a88538a192081ffc55bd998de81325ea63163413 Mon Sep 17 00:00:00 2001
From: Michael <18899420+mtar@users.noreply.github.com>
Date: Mon, 2 Feb 2026 15:34:54 +0100
Subject: [PATCH 7/8] Revert "Delete uv.lock"

This reverts commit 7a0f7f9c1031ec0fff627d42ca9ea23c802c04d8.
---
 uv.lock | 3350 +++++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 3350 insertions(+)
 create mode 100644 uv.lock

diff --git a/uv.lock b/uv.lock
new file mode 100644
index 000000000..491002ade
--- /dev/null
+++ b/uv.lock
@@ -0,0 +1,3350 @@
+version = 1
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+    { name = "weathergen-evaluate", editable = "packages/evaluate" },
+    { name = "weathergen-readers-extra", editable = "packages/readers_extra" },
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+]
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From 716951e6c41f3767750519df147178263c7c3318 Mon Sep 17 00:00:00 2001
From: Michael Tarnawa <18899420+mtar@users.noreply.github.com>
Date: Mon, 2 Feb 2026 15:53:26 +0100
Subject: [PATCH 8/8] revert changes in uv.lock

---
 uv.lock | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/uv.lock b/uv.lock
index 491002ade..cbeab0cb6 100644
--- a/uv.lock
+++ b/uv.lock
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 [[package]]
@@ -3071,6 +3072,7 @@ dependencies = [
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     { name = "omegaconf", marker = "(platform_machine == 'arm64' and sys_platform == 'darwin') or (platform_machine == 'aarch64' and sys_platform == 'linux') or (platform_machine == 'x86_64' and sys_platform == 'linux') or (sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'darwin' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu')" },
     { name = "pyyaml", marker = "(platform_machine == 'arm64' and sys_platform == 'darwin') or (platform_machine == 'aarch64' and sys_platform == 'linux') or (platform_machine == 'x86_64' and sys_platform == 'linux') or (sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'darwin' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu')" },
+    { name = "tqdm", marker = "(platform_machine == 'arm64' and sys_platform == 'darwin') or (platform_machine == 'aarch64' and sys_platform == 'linux') or (platform_machine == 'x86_64' and sys_platform == 'linux') or (sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'darwin' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu')" },
     { name = "xarray", marker = "(platform_machine == 'arm64' and sys_platform == 'darwin') or (platform_machine == 'aarch64' and sys_platform == 'linux') or (platform_machine == 'x86_64' and sys_platform == 'linux') or (sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'darwin' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu') or (sys_platform == 'linux' and extra == 'extra-10-weathergen-cpu' and extra == 'extra-10-weathergen-gpu')" },
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@@ -3090,6 +3092,7 @@ requires-dist = [
     { name = "numcodecs", specifier = "<0.16.0" },
     { name = "omegaconf", specifier = "~=2.3.0" },
     { name = "pyyaml" },
+    { name = "tqdm" },
     { name = "xarray", specifier = ">=2025.6.1" },
     { name = "zarr", specifier = "~=3.1.3" },
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